CmoCh17G002960 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh17G002960
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Tubby-like F-box protein
Location	Cmo_Chr17: 1778045 .. 1781084 (+)
RNA-Seq Expression	CmoCh17G002960
Synteny	CmoCh17G002960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTTCCCGCTCCCGCCCTGTGGTGCAGGACAGCTCCGCTCCGGAGCCGAGGGACGACATGGAACACAGCGGTTGGGCCAATATGCCTTCGGAGCTTCTCAGGGATATTTTTATGAGAATCGAGGAGTCGGAGGCCTCATGGCCGCTGAGGAGAAGTGTCGTCGCTTGCGCCGGAGTTTGTCGGAGCTGGCGAATGATTTCTAAGGAGATCGTCCTAACGCTGGAGGTTTCCGGCAGGTTGACATTCCCAATCTCTCTCAAGCAGGTGAGTGAGTATTTCGCGCTTGTTGTTAATTTGGCGGATTTTAGGTATATTTGGTATGGTTTTGAACTGATTGGAAATTTGAATGTTGTTGCTATAATGATGTGTTTTACTCTTAAGAGTACGCTGGATTGCCCTAAGTTTCTTTGCTCTATAGCTTTCGATTCTTCCATTTTTGTTCATTAAGTTTACGGTTTCTTTTGATCGAGAATGATGTTGAATTCAGATGTTTTGAATGTTGTTTTTGTGTACGCAAAAATTGATCCTGCGATCAATGCATTTTCAGCCTGGTCCATACTCCTAGATTTTACTTTTTACGTCTGGAGGTACTTTTGCAGCCTGGTCCAAGGGATCATATTGTACGGTGTTTCATAAAGAGAAACAGCTCCAACCAGACCTATCATCTCTTCCTCAATTTGACAAATGGTTAGTGATTTATATGCTAAATTGAGGTTTCCTAGCTTTGGTTAGGAATTGCGACTCTCCACAGTGGTATGATATTGTCTACTTTGAGCATAAGCTCTCGTGGCTTTGCTTTGGGCTTCCCCAAAAGGTCTCATTCCAACGGAGAGATTGTATTCCTCACTTATAAATCCATGATCTTCCACTAAATTAACCAACGTGGGACTCACTCCCAATGATCCTCAACAGCTTTAAAATGTCTGAATGGTTCATTTCTTAATCACAGCACTAACTGAGGATGGTAAATTTCTACTTGCTGCTCATAAATGGAAGCGCCCGACCTACACGGATTACGATATCTCGTTGTGTGCTGAGGATTCGTCGAAGGGGAGCGACACCACCATTGTTGGGAAATTGAGGTATGCTTGTTCTTGAAGGCTTCTGATGCCATTATTAGATCTTTGTTTTAGATTTCTGAGAGTTTTTTCTTTTTACCTTGTCTGGGAAAAGATCTAATTTCCTAGGAACCAAGTTCACAATCTTCGATAAGCAACCGCCACATTCCGAAGCCAAGATCACGAAAAGTACGAAAAGCACGAAAAGCACGCAAGGTCTCTCCTCAAGGCCAGTGCATCTGAATGAAGTTTCACCCAATGTCCCTTCAGGAAACTACCCTGTTGCTCACATTTCATATGAACTAAATGTGTTGGGATCAAGGTAATTCCAAGGCGATCGGATAATTGGCTTATGATTTATGGTTATTCTTTGTTTGGATGACTGCATTTGTTCTTTAGATGTCTAGCAAATGCTCAACAGTTCATGTGATTAACACGCAGGGGTCCGAGGAGAATGCAGTGTGTCATGGACGCCATTCCCGCTTCTGCGGTTGAACCTGGAGGAGTTGCTCCCACGCTGGCCGAGCTTTCTTTGAGGAATATCGAATTGATTCCATCATTCCCGTTTTGGAGGTTGAATTCGGATACGGATAGCTTGATGTCTAAACCTTTGGACAGTCAGGAAGATGGAATATTGATGCTGAGAAACAAAACTCCCCGGTGGCACGAGCGGCTTCAATGCTGGTGTTTAAACTTTCATGGAAGAGTTACAATTGCTTCTGTGAAAAATTTTCAACTAGTCGCATCTAGGGAAGACGAACAACCTACAGACGATCATGACACGATCATCCTTCAGTTTGGAAAAGTGGGGAAGGGTTTATTCACAATGGATTATCGTTACCCGATCTCCGCTTTCCTGGCTTTCGCAATCTGCCTCAGCAGCATTGACACCAAGATTGCTTGTGAATGATAGACATATCATTTAACAGGTGAAACTGTCATTTATTTCTAAGACTCTATTATAGTATTGCTATATACATACTTCACAATGTCATGTGCACAAACTAGGAGAAGAAGCCACATTTTATCTTCGATTTCTTTAATTCGAGTATGAAATGAATTCATATATTCATACGTTTTATCCCATGATATCATCTATTCCTTGCAATGCGTCGGTCTTGTCGATCTCTGTAAACTATTTTGCTCGAAAATGTTTTGTTTTCCAGTATGTACTCTGCATGATATTATGTTCTCAATTGTCGGTTTTTTGCAAGCTGACATGTTATTAGTTCAAAGTTCGGTATCGCTGCTTGTACTCGAAACTGTTTTTCTCGAAATATCCCGTTCTTTATTGAATGTTCATGCTATAAGATCTTCCATTGATTCTTATTCCATAAACTATGCTTTGTGCTTATGATATCCCTTTCATTGATTATGGCCATGTCAATTGACTTCAACAATATCTACAATATCACTAGAGTAAGAACGACTTGATGTGCGACCGTACTCGAACACGATCTGTTCTATAGATTGTACACGAACACGATCTGTTCTATAGATTGTACACGAACACGATCTGTTCTATAGATTGTACACGAACACGATCTGTTCTATAGGTTGTACACGAACACGATCTGTTCTATAGGTTGTACACGAACACGATCTGTTCTATAGGTTGTACACGAACACGATCTGTTCTATAAGTTGTACACGAACACGATCTGTTCTATAGATTGTACTCGAACACGATCTGTTCTGTAGATTGTACTGGTACACGATCTGTAGATTGTACTGATACACGATCTGTAGATGGATCATGAGTTTACTTTGTGATGCAGGGAAGGGATGCTCAGTTTGAAGGTCCACGAATGGCTTCTGGCAATAAAATCGTTCATAAATGGTTCTTGAAGTCTTTTTATTTGATTATGATGTGAATATTTCTCCCAGTTTGTGTAAATAGTGATTTTTTATTTTTTATTTTTCAATTGAAGAAGTTGAATGGCAGTGGTTGACCGTTGAAATCAGCTATTCATTTTCGT

mRNA sequence

ATGAGTTCCCGCTCCCGCCCTGTGGTGCAGGACAGCTCCGCTCCGGAGCCGAGGGACGACATGGAACACAGCGGTTGGGCCAATATGCCTTCGGAGCTTCTCAGGGATATTTTTATGAGAATCGAGGAGTCGGAGGCCTCATGGCCGCTGAGGAGAAGTGTCGTCGCTTGCGCCGGAGTTTGTCGGAGCTGGCGAATGATTTCTAAGGAGATCGTCCTAACGCTGGAGGTTTCCGGCAGGTTGACATTCCCAATCTCTCTCAAGCAGGTGAGTGAGTATTTCGCGCTTGTTGTTAATTTGGCGGATTTTAGGTATATTTGGTATGGTTTTGAACTGATTGGAAATTTGAATGTTGTTGCTATAATGATGTGTTTTACTCTTAAGAATGTTTTGAATGTTGTTTTTGTGTACGCAAAAATTGATCCTGCGATCAATGCATTTTCAGCCTGGTCCATACTCCTAGATTTTACTTTTTACCGCCCGACCTACACGGATTACGATATCTCGTTGTGTGCTGAGGATTCGTCGAAGGGGAGCGACACCACCATTGTTGGGAAATTGAGATCTAATTTCCTAGGAACCAAGTTCACAATCTTCGATAAGCAACCGCCACATTCCGAAGCCAAGATCACGAAAAGTACGAAAAGCACGAAAAGCACGCAAGGTCTCTCCTCAAGGCCAGTGCATCTGAATGAAGTTTCACCCAATGTCCCTTCAGGAAACTACCCTGTTGCTCACATTTCATATGAACTAAATGTGTTGGGATCAAGGGGTCCGAGGAGAATGCAGTGTGTCATGGACGCCATTCCCGCTTCTGCGGTTGAACCTGGAGGAGTTGCTCCCACGCTGGCCGAGCTTTCTTTGAGGAATATCGAATTGATTCCATCATTCCCGTTTTGGAGGTTGAATTCGGATACGGATAGCTTGATGTCTAAACCTTTGGACAGTCAGGAAGATGGAATATTGATGCTGAGAAACAAAACTCCCCGGTGGCACGAGCGGCTTCAATGCTGGTGTTTAAACTTTCATGGAAGAGTTACAATTGCTTCTGTGAAAAATTTTCAACTAGTCGCATCTAGGGAAGACGAACAACCTACAGACGATCATGACACGATCATCCTTCAGTTTGGAAAAGTGGGGAAGGGTTTATTCACAATGGATTATCGTTACCCGATCTCCGCTTTCCTGGCTTTCGCAATCTGCCTCAGCAGCATTGACACCAAGATTGCTTGTGAATGATAGACATATCATTTAACAGGGAAGGGATGCTCAGTTTGAAGGTCCACGAATGGCTTCTGGCAATAAAATCGTTCATAAATGGTTCTTGAAGTCTTTTTATTTGATTATGATGTGAATATTTCTCCCAGTTTGTGTAAATAGTGATTTTTTATTTTTTATTTTTCAATTGAAGAAGTTGAATGGCAGTGGTTGACCGTTGAAATCAGCTATTCATTTTCGT

Coding sequence (CDS)

ATGAGTTCCCGCTCCCGCCCTGTGGTGCAGGACAGCTCCGCTCCGGAGCCGAGGGACGACATGGAACACAGCGGTTGGGCCAATATGCCTTCGGAGCTTCTCAGGGATATTTTTATGAGAATCGAGGAGTCGGAGGCCTCATGGCCGCTGAGGAGAAGTGTCGTCGCTTGCGCCGGAGTTTGTCGGAGCTGGCGAATGATTTCTAAGGAGATCGTCCTAACGCTGGAGGTTTCCGGCAGGTTGACATTCCCAATCTCTCTCAAGCAGGTGAGTGAGTATTTCGCGCTTGTTGTTAATTTGGCGGATTTTAGGTATATTTGGTATGGTTTTGAACTGATTGGAAATTTGAATGTTGTTGCTATAATGATGTGTTTTACTCTTAAGAATGTTTTGAATGTTGTTTTTGTGTACGCAAAAATTGATCCTGCGATCAATGCATTTTCAGCCTGGTCCATACTCCTAGATTTTACTTTTTACCGCCCGACCTACACGGATTACGATATCTCGTTGTGTGCTGAGGATTCGTCGAAGGGGAGCGACACCACCATTGTTGGGAAATTGAGATCTAATTTCCTAGGAACCAAGTTCACAATCTTCGATAAGCAACCGCCACATTCCGAAGCCAAGATCACGAAAAGTACGAAAAGCACGAAAAGCACGCAAGGTCTCTCCTCAAGGCCAGTGCATCTGAATGAAGTTTCACCCAATGTCCCTTCAGGAAACTACCCTGTTGCTCACATTTCATATGAACTAAATGTGTTGGGATCAAGGGGTCCGAGGAGAATGCAGTGTGTCATGGACGCCATTCCCGCTTCTGCGGTTGAACCTGGAGGAGTTGCTCCCACGCTGGCCGAGCTTTCTTTGAGGAATATCGAATTGATTCCATCATTCCCGTTTTGGAGGTTGAATTCGGATACGGATAGCTTGATGTCTAAACCTTTGGACAGTCAGGAAGATGGAATATTGATGCTGAGAAACAAAACTCCCCGGTGGCACGAGCGGCTTCAATGCTGGTGTTTAAACTTTCATGGAAGAGTTACAATTGCTTCTGTGAAAAATTTTCAACTAGTCGCATCTAGGGAAGACGAACAACCTACAGACGATCATGACACGATCATCCTTCAGTTTGGAAAAGTGGGGAAGGGTTTATTCACAATGGATTATCGTTACCCGATCTCCGCTTTCCTGGCTTTCGCAATCTGCCTCAGCAGCATTGACACCAAGATTGCTTGTGAATGA

Protein sequence

MSSRSRPVVQDSSAPEPRDDMEHSGWANMPSELLRDIFMRIEESEASWPLRRSVVACAGVCRSWRMISKEIVLTLEVSGRLTFPISLKQVSEYFALVVNLADFRYIWYGFELIGNLNVVAIMMCFTLKNVLNVVFVYAKIDPAINAFSAWSILLDFTFYRPTYTDYDISLCAEDSSKGSDTTIVGKLRSNFLGTKFTIFDKQPPHSEAKITKSTKSTKSTQGLSSRPVHLNEVSPNVPSGNYPVAHISYELNVLGSRGPRRMQCVMDAIPASAVEPGGVAPTLAELSLRNIELIPSFPFWRLNSDTDSLMSKPLDSQEDGILMLRNKTPRWHERLQCWCLNFHGRVTIASVKNFQLVASREDEQPTDDHDTIILQFGKVGKGLFTMDYRYPISAFLAFAICLSSIDTKIACE

Homology

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BLAST of CmoCh17G002960 vs. ExPASy Swiss-Prot
Match: Q8VY21 (Tubby-like F-box protein 3 OS=Arabidopsis thaliana OX=3702 GN=TULP3 PE=1 SV=1)

HSP 1 Score: 418.3 bits (1074), Expect = 1.0e-115
Identity = 228/413 (55.21%), Postives = 285/413 (69.01%), Query Frame = 0


Query: 3   SRSRPVVQDSSAPEPRDDMEHSGWANMPSELLRDIFMRIEESEASWPLRRSVVACAGVCR 62
           SRS+ VVQD+S P   D  + S WA+MP ELLRD+ MRIE+SE +WP R++VV+CAGVCR
Sbjct: 31  SRSQRVVQDTSVPV--DAFKQSCWASMPPELLRDVLMRIEQSEDTWPSRKNVVSCAGVCR 90

Query: 63  SWRMISKEIVLTLEVSGRLTFPISLKQVSEYFALVVNLADFRYIWYGFELIGNLNVVAIM 122
           +WR I KEIV   E+S +LTFPISLKQ     +LV                         
Sbjct: 91  NWREIVKEIVRVPELSSKLTFPISLKQPGPRGSLV------------------------- 150

Query: 123 MCFTLKNVLN-VVFVYAKIDPAINAFSAWSILLDFTFYRPTYTDYDISLCAEDSSKGSDT 182
            C+ ++N  N   ++Y  ++ A +      +L    F RPT TDY ISL  +D S+GS+ 
Sbjct: 151 QCYIMRNRSNQTYYLYLGLNQAASNDDGKFLLAAKRFRRPTCTDYIISLNCDDVSRGSN- 210

Query: 183 TIVGKLRSNFLGTKFTIFDKQPPHSEAKITKSTKSTKSTQGLSSRPVHLNEVSPNVPSGN 242
           T +GKLRSNFLGTKFT++D QP +   ++T++          SSR + L +VSP +PSGN
Sbjct: 211 TYIGKLRSNFLGTKFTVYDAQPTNPGTQVTRTR---------SSRLLSLKQVSPRIPSGN 270

Query: 243 YPVAHISYELNVLGSRGPRRMQCVMDAIPASAVEPGGVAPTLAELSLRNIELIPSFPFWR 302
           YPVAHISYELNVLGSRGPRRMQCVMDAIPASAVEPGG APT  EL   N++  PSF F+R
Sbjct: 271 YPVAHISYELNVLGSRGPRRMQCVMDAIPASAVEPGGTAPTQTELVHSNLDSFPSFSFFR 330

Query: 303 LNS-DTDSLMSKPLD-SQEDGILMLRNKTPRWHERLQCWCLNFHGRVTIASVKNFQLVAS 362
             S   +SL S P   +Q++G+L+L+NK PRWHE+LQCWCLNF+GRVT+ASVKNFQLVA+
Sbjct: 331 SKSIRAESLPSGPSSAAQKEGLLVLKNKAPRWHEQLQCWCLNFNGRVTVASVKNFQLVAA 390

Query: 363 REDEQPTDDHDTIILQFGKVGKGLFTMDYRYPISAFLAFAICLSSIDTKIACE 413
            E+     +H+ +ILQFGKVGK +FTMDY+YPISAF AF ICLSS DTKIACE
Sbjct: 391 PENGPAGPEHENVILQFGKVGKDVFTMDYQYPISAFQAFTICLSSFDTKIACE 406

[Close]

BLAST of CmoCh17G002960 vs. ExPASy Swiss-Prot
Match: Q10LG8 (Tubby-like F-box protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=TULP6 PE=2 SV=1)

HSP 1 Score: 389.0 bits (998), Expect = 6.5e-107
Identity = 210/393 (53.44%), Postives = 257/393 (65.39%), Query Frame = 0


Query: 21  MEHSGWANMPSELLRDIFMRIEESEASWPLRRSVVACAGVCRSWRMISKEIVLTLEVSGR 80
           M+ S WA +P ELLR++ +RIEESE  WP RR VVACAGVCRSWR I+KEIV   E SG+
Sbjct: 47  MQQSCWAQLPPELLREVLVRIEESEVWWPSRRDVVACAGVCRSWRGITKEIVRVPEASGK 106

Query: 81  LTFPISLKQVSEYFALVVNLADFRYIWYGFELIGNLNVVAIMMCFTLKN-VLNVVFVYAK 140
           LTFPISLKQ                                + CF  +N      ++Y  
Sbjct: 107 LTFPISLKQPGPR-------------------------DGTLKCFIRRNRTTQTYYLYIG 166

Query: 141 IDPAINAFSAWSILLDFTFYRPTYTDYDISLCAEDSSKGSDTTIVGKLRSNFLGTKFTIF 200
           +  A+ A     +L      +PT TDY ISL   D SKGS+ T +GKLRSNFLGTKFT++
Sbjct: 167 LTEAL-ADDGKFLLAARKCRKPTCTDYLISLDMSDMSKGSN-TYIGKLRSNFLGTKFTVY 226

Query: 201 DKQPPHSEAKITKSTKSTKSTQGLSSRPVHLNEVSPNVPSGNYPVAHISYELNVLGSRGP 260
           D  PP+  A ++KS          S+R V LN+VSP VP+GNYPV+HISYELNVLG+RGP
Sbjct: 227 DAHPPYDGAVVSKSR---------SARVVGLNQVSPRVPAGNYPVSHISYELNVLGARGP 286

Query: 261 RRMQCVMDAIPASAVEPGGVAPTLAELSLRNIELIPSFPFWRLNSDTDSLMSKPLDSQED 320
           RRM C+MD+IP SAV+ GG APT  E  L  ++  PS  F+R  S      +  L +Q++
Sbjct: 287 RRMNCIMDSIPTSAVQEGGKAPTQTEFPLSGLDSFPSISFFRSKSARIDSATSQLSTQKE 346

Query: 321 GILMLRNKTPRWHERLQCWCLNFHGRVTIASVKNFQLVASREDEQPTDDHDTIILQFGKV 380
             L+L+NK+PRWHE+LQCWCLNF GRVT+ASVKNFQLVAS E+     + D +ILQFGK+
Sbjct: 347 EKLVLKNKSPRWHEQLQCWCLNFRGRVTVASVKNFQLVASDENGPTNQEQDKVILQFGKI 403

Query: 381 GKGLFTMDYRYPISAFLAFAICLSSIDTKIACE 413
           GK LFTMDYRYPISAF +FAICLSS DTKIACE
Sbjct: 407 GKDLFTMDYRYPISAFQSFAICLSSFDTKIACE 403

[Close]

BLAST of CmoCh17G002960 vs. ExPASy Swiss-Prot
Match: Q8H485 (Tubby-like F-box protein 11 OS=Oryza sativa subsp. japonica OX=39947 GN=TULP11 PE=2 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 8.8e-104
Identity = 212/409 (51.83%), Postives = 255/409 (62.35%), Query Frame = 0


Query: 12  SSAPEPRDD-------MEHSGWANMPSELLRDIFMRIEESEASWPLRRSVVACAGVCRSW 71
           ++A EP D+       M  S W  +P ELLR++  R+EESE  WP RR VVACAGVCRSW
Sbjct: 34  AAAEEPPDESSAAALVMRESCWTQLPPELLREVLARVEESEGWWPRRRDVVACAGVCRSW 93

Query: 72  RMISKEIVLTLEVSGRLTFPISLKQVSEYFALVVNLADFRYIWYGFELIGNLNVVAIMMC 131
           R I +EIV T E SG LTFPISLKQ                              A M C
Sbjct: 94  RGIVREIVRTPEASGNLTFPISLKQPGPR-------------------------DAPMKC 153

Query: 132 FTLKN-VLNVVFVYAKIDPAINAFSAWSILLDFTFYRPTYTDYDISLCAEDSSKGSDTTI 191
           F ++N      ++Y  +  A+     + +L      R T T+Y ISL   D SK +D + 
Sbjct: 154 FIVRNRTTQTYYLYIGLTDALTDDGKF-LLAARKCRRTTCTEYLISLDMNDISKRTD-SY 213

Query: 192 VGKLRSNFLGTKFTIFDKQPPHSEAKITKSTKSTKSTQGLSSRPVHLNEVSPNVPSGNYP 251
           VGKLRSNFLGTKFTI+D  PP++   I+K         G S+R +  N +SP +P+GNYP
Sbjct: 214 VGKLRSNFLGTKFTIYDAHPPYAGDVISK---------GQSARVIGSNHLSPRIPAGNYP 273

Query: 252 VAHISYELNVLGSRGPRRMQCVMDAIPASAVEPGGVAPTLAELSLRNIELIPSFPFWRLN 311
           V+HISYELNVLGSRGPRRM C MD+IP SA+E GG APT  E  L   E   S PF++  
Sbjct: 274 VSHISYELNVLGSRGPRRMHCAMDSIPVSAIEQGGTAPTQTEFPLSYHESFTSIPFFKSK 333

Query: 312 SDTDSLMSKPLDSQEDGILMLRNKTPRWHERLQCWCLNFHGRVTIASVKNFQLVASREDE 371
           S   +  +  L +Q    L+L+NK+PRWHE LQCWCLNFHGRVT+ASVKNFQLVAS E  
Sbjct: 334 SVRANNSTASLLTQNGSKLVLKNKSPRWHEHLQCWCLNFHGRVTVASVKNFQLVASDESN 393

Query: 372 QPTDDHDTIILQFGKVGKGLFTMDYRYPISAFLAFAICLSSIDTKIACE 413
               +HD +ILQFGKVGK +FTMDYRYPISAF AFAICLSS DTKIACE
Sbjct: 394 PTNQEHDDVILQFGKVGKDMFTMDYRYPISAFQAFAICLSSFDTKIACE 406

[Close]

BLAST of CmoCh17G002960 vs. ExPASy Swiss-Prot
Match: Q9ZP59 (Tubby-like F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=TULP1 PE=1 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 2.3e-88
Identity = 198/453 (43.71%), Postives = 268/453 (59.16%), Query Frame = 0


Query: 4   RSRPVVQDSSAPEPRDDMEHSGWANMPSELLRDIFMRIEESEASWPLRRSVVACAGVCRS 63
           +SR  VQDS   +    ++ + WAN+P ELLRD+  R+EESE+ WP RR VVACA VCRS
Sbjct: 35  KSRGSVQDSHEEQLVVTIQETPWANLPPELLRDVIKRLEESESVWPARRHVVACASVCRS 94

Query: 64  WRMISKEIVLTLEVSGRLTFPISLKQVSEYFALVVNLADFRYIWYGFELIGNLNVVAIMM 123
           WR + KEIV + E+SG++TFP+SLKQ                              A M 
Sbjct: 95  WRDMCKEIVQSPELSGKITFPVSLKQPGPR-------------------------DATMQ 154

Query: 124 CFTLKNVLNVVF-VYAKIDPAINAFSAWSILLDFTFYRPTYTDYDISLCAEDSSKGSDTT 183
           CF  ++  N+ + +Y  + PA+   +   +L      R TYT+Y IS+ A+  S+ S+ T
Sbjct: 155 CFIKRDKSNLTYHLYLCLSPALLVENGKFLLSAKRIRRTTYTEYVISMHADTISRSSN-T 214

Query: 184 IVGKLRSNFLGTKFTIFDKQPPHSEAKITKSTKSTKSTQGLSSRPVHLNEVSPNVPSGNY 243
            +GK+RSNFLGTKF I+D QP ++ + I ++ +      GLS R  +   VSP VPSG+Y
Sbjct: 215 YIGKIRSNFLGTKFIIYDTQPAYN-SNIARAVQPV----GLSRR-FYSKRVSPKVPSGSY 274

Query: 244 PVAHISYELNVLGSRGPRRMQCVMDAIPASAVEPGGVAP---------TLAELSLRNIEL 303
            +A +SYELNVLG+RGPRRM C M++IPAS++  GG  P         ++ + S R+I  
Sbjct: 275 KIAQVSYELNVLGTRGPRRMHCAMNSIPASSLAEGGTVPGQPDIIVPRSILDESFRSITS 334

Query: 304 IPSFPF-WRLNSDTDSL----MSKPLDSQEDGI-----------LMLRNKTPRWHERLQC 363
             S    +  ++D  S     +  PL   ++ +           L+L+NK PRWHE+LQC
Sbjct: 335 SSSRKITYDYSNDFSSARFSDILGPLSEDQEVVLEEGKERNSPPLVLKNKPPRWHEQLQC 394

Query: 364 WCLNFHGRVTIASVKNFQLVASREDE---------------QP---TDDHDTIILQFGKV 413
           WCLNF GRVT+ASVKNFQL+A+ + +               QP   TD  D IILQFGKV
Sbjct: 395 WCLNFRGRVTVASVKNFQLIAANQPQPQPQPQPQPQPLTQPQPSGQTDGPDKIILQFGKV 454

[Close]

BLAST of CmoCh17G002960 vs. ExPASy Swiss-Prot
Match: Q69U54 (Tubby-like F-box protein 12 OS=Oryza sativa subsp. japonica OX=39947 GN=TULP12 PE=2 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 8.8e-88
Identity = 190/449 (42.32%), Postives = 248/449 (55.23%), Query Frame = 0


Query: 4   RSRPVVQDSSAPEPRDDMEHSGWANMPSELLRDIFMRIEESEASWPLRRSVVACAGVCRS 63
           R RPVV D S            W  +P ELLRD+  R+EE E++WP R+ VVACA VCR+
Sbjct: 48  RDRPVVVDQSR-----------WVGLPPELLRDVMKRLEEGESNWPSRKDVVACAAVCRT 107

Query: 64  WRMISKEIVLTLEVSGRLTFPISLKQVSEYFALVVNLADFRYIWYGFELIGNLNVVAIMM 123
           WR I K+IV + E+ G+LTFP+SLKQ      L+                          
Sbjct: 108 WREICKDIVQSPEICGKLTFPVSLKQPGPRDGLI-------------------------Q 167

Query: 124 CFTLKNVLNVV-FVYAKIDPAINAFSAWSILLDFTFYRPTYTDYDISLCAEDSSKGSDTT 183
           CF  ++   +  ++Y  + PA+ + +   +L      R T T+Y IS+ +++ S+ S+  
Sbjct: 168 CFIKRDKSKLTYYLYLCLSPAVLSENGKFLLAAKRNRRATSTEYIISVDSKNISRSSN-G 227

Query: 184 IVGKLRSNFLGTKFTIFDKQPPHSEAKITKSTKSTKSTQGLSSRPVHLNEVSPNVPSGNY 243
            VGK+RSNFLGTKF ++D QPP++   +              SR +    VSP +P+G+Y
Sbjct: 228 YVGKMRSNFLGTKFVVYDTQPPYNAGSLMSCQH--------GSRRISSRRVSPKLPTGSY 287

Query: 244 PVAHISYELNVLGSRGPRRMQCVMDAIPASAVEPGGVAPTLAEL--------SLRNIELI 303
           P+AH+ YELNVLG+RGPRRMQC M +IPASAV+P GV P   E         S R+    
Sbjct: 288 PIAHVKYELNVLGTRGPRRMQCTMHSIPASAVDPEGVVPGQPEQLLPGPFEESFRSTNTS 347

Query: 304 PSFPFWRLNSDTDSLMSKPLDSQ-----EDGI-------LMLRNKTPRWHERLQCWCLNF 363
             F F   + D  S     +        ED I       L+LRNK PRWHE+LQCWCLNF
Sbjct: 348 SRFSFMDRSLDFSSSRFSEISGSANQQGEDDIPEAKERPLVLRNKVPRWHEQLQCWCLNF 407

Query: 364 HGRVTIASVKNFQLVASREDE-------------------QPTDDHDTIILQFGKVGKGL 413
            GRVT+ASVKNFQL+A+   E                       DH  +ILQFGKVGK +
Sbjct: 408 RGRVTVASVKNFQLIAAASSESSQLEQQQQQQQQNHASSSSSASDHGKVILQFGKVGKDM 451

[Close]

BLAST of CmoCh17G002960 vs. ExPASy TrEMBL
Match: A0A6J1H3G5 (tubby-like F-box protein 3 OS=Cucurbita moschata OX=3662 GN=LOC111460144 PE=3 SV=1)

HSP 1 Score: 675.6 bits (1742), Expect = 1.3e-190
Identity = 349/413 (84.50%), Postives = 359/413 (86.92%), Query Frame = 0


Query: 1   MSSRSRPVVQDSSAPEPRDDMEHSGWANMPSELLRDIFMRIEESEASWPLRRSVVACAGV 60
           MSSRSRPVVQDSSAPEPRDDMEHSGWANMPSELLRDIFMRIEESEASWPLRRSVVACAGV
Sbjct: 10  MSSRSRPVVQDSSAPEPRDDMEHSGWANMPSELLRDIFMRIEESEASWPLRRSVVACAGV 69

Query: 61  CRSWRMISKEIVLTLEVSGRLTFPISLKQVSEYFALVVNLADFRYIWYGFELIGNLNVVA 120
           CRSWRMISKEIVLTLEVSGRLTFPISLKQ      +V                       
Sbjct: 70  CRSWRMISKEIVLTLEVSGRLTFPISLKQPGPRDHIV----------------------- 129

Query: 121 IMMCFTLKNVLNVVF-VYAKIDPAINAFSAWSILLDFTFYRPTYTDYDISLCAEDSSKGS 180
              CF  +N  N  + ++  +  A+     + +L    + RPTYTDYDISLCAEDSSKGS
Sbjct: 130 --RCFIKRNSSNQTYHLFLNLTNALTEDGKF-LLAAHKWKRPTYTDYDISLCAEDSSKGS 189

Query: 181 DTTIVGKLRSNFLGTKFTIFDKQPPHSEAKITKSTKSTKSTQGLSSRPVHLNEVSPNVPS 240
           DTTIVGKLRSNFLGTKFTIFDKQPPHSEAKITKSTKSTKSTQGLSSRPVHLNEVSPNVPS
Sbjct: 190 DTTIVGKLRSNFLGTKFTIFDKQPPHSEAKITKSTKSTKSTQGLSSRPVHLNEVSPNVPS 249

Query: 241 GNYPVAHISYELNVLGSRGPRRMQCVMDAIPASAVEPGGVAPTLAELSLRNIELIPSFPF 300
           GNYPVAHISYELNVLGSRGPRRMQCVMDAIPASAVEPGGVAPTLAELSLRNIELIPSFPF
Sbjct: 250 GNYPVAHISYELNVLGSRGPRRMQCVMDAIPASAVEPGGVAPTLAELSLRNIELIPSFPF 309

Query: 301 WRLNSDTDSLMSKPLDSQEDGILMLRNKTPRWHERLQCWCLNFHGRVTIASVKNFQLVAS 360
           WRLNSDTDSLMSKPLDSQEDGILMLRNKTPRWHERLQCWCLNFHGRVTIASVKNFQLVAS
Sbjct: 310 WRLNSDTDSLMSKPLDSQEDGILMLRNKTPRWHERLQCWCLNFHGRVTIASVKNFQLVAS 369

Query: 361 REDEQPTDDHDTIILQFGKVGKGLFTMDYRYPISAFLAFAICLSSIDTKIACE 413
           REDEQPTDDHDTIILQFGKVGKGLFTMDYRYPISAFLAFAICLSSIDTKIACE
Sbjct: 370 REDEQPTDDHDTIILQFGKVGKGLFTMDYRYPISAFLAFAICLSSIDTKIACE 396

[Close]

BLAST of CmoCh17G002960 vs. ExPASy TrEMBL
Match: A0A6J1L1K1 (tubby-like F-box protein 3 OS=Cucurbita maxima OX=3661 GN=LOC111499019 PE=3 SV=1)

HSP 1 Score: 629.4 bits (1622), Expect = 1.1e-176
Identity = 331/413 (80.15%), Postives = 346/413 (83.78%), Query Frame = 0


Query: 1   MSSRSRPVVQDSSAPEPRDDMEHSGWANMPSELLRDIFMRIEESEASWPLRRSVVACAGV 60
           M SRSRPVVQDSSAPEPRDD+EHSGWANMPSELLRDIFMRIEESEA WPLR+SVVACAGV
Sbjct: 10  MRSRSRPVVQDSSAPEPRDDLEHSGWANMPSELLRDIFMRIEESEALWPLRKSVVACAGV 69

Query: 61  CRSWRMISKEIVLTLEVSGRLTFPISLKQVSEYFALVVNLADFRYIWYGFELIGNLNVVA 120
           CRSWR+ISKEIVLTLEVSGRLTFPISLKQ                               
Sbjct: 70  CRSWRIISKEIVLTLEVSGRLTFPISLKQPGPR-------------------------DN 129

Query: 121 IMMCFTLKNVLN-VVFVYAKIDPAINAFSAWSILLDFTFYRPTYTDYDISLCAEDSSKGS 180
           I+ CF  +N  N   +++  +  A+     + +L    + RPTYTDYDISLCAEDSSKGS
Sbjct: 130 ILRCFIKRNSSNQTYYLFLNLTNALTEDGKF-LLAAHKWKRPTYTDYDISLCAEDSSKGS 189

Query: 181 DTTIVGKLRSNFLGTKFTIFDKQPPHSEAKITKSTKSTKSTQGLSSRPVHLNEVSPNVPS 240
           D TIVGKLRSNFLGTKFTIFDKQP HSEAKITKSTKST+S    SSRPVHLNEVS NVPS
Sbjct: 190 D-TIVGKLRSNFLGTKFTIFDKQPSHSEAKITKSTKSTQSR---SSRPVHLNEVSSNVPS 249

Query: 241 GNYPVAHISYELNVLGSRGPRRMQCVMDAIPASAVEPGGVAPTLAELSLRNIELIPSFPF 300
           GNYPVAHISYELNVLGSRGPRRMQCVMDAIPASAVEPGGVAPTLAELSLRNIELIPSFPF
Sbjct: 250 GNYPVAHISYELNVLGSRGPRRMQCVMDAIPASAVEPGGVAPTLAELSLRNIELIPSFPF 309

Query: 301 WRLNSDTDSLMSKPLDSQEDGILMLRNKTPRWHERLQCWCLNFHGRVTIASVKNFQLVAS 360
           WRLNSD DSLM KP DSQEDGILMLRNKTPRWHE+LQCWCLNFHGRVTIASVKNFQLVAS
Sbjct: 310 WRLNSDMDSLMCKPSDSQEDGILMLRNKTPRWHEQLQCWCLNFHGRVTIASVKNFQLVAS 369

Query: 361 REDEQPTDDHDTIILQFGKVGKGLFTMDYRYPISAFLAFAICLSSIDTKIACE 413
           REDEQPTDDHDTIILQFGKVGK LFTMDYRYPISAFLAFAICLSSIDTKIACE
Sbjct: 370 REDEQPTDDHDTIILQFGKVGKDLFTMDYRYPISAFLAFAICLSSIDTKIACE 392

[Close]

BLAST of CmoCh17G002960 vs. ExPASy TrEMBL
Match: A0A5A7SVJ4 (Tubby-like F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold111G001220 PE=3 SV=1)

HSP 1 Score: 500.4 bits (1287), Expect = 7.4e-138
Identity = 270/413 (65.38%), Postives = 306/413 (74.09%), Query Frame = 0


Query: 1   MSSRSRPVVQDSSAPEPRDDMEHSGWANMPSELLRDIFMRIEESEASWPLRRSVVACAGV 60
           M SRSR VVQD+SAP P D ++ S WANMP ELLR++ MRIE SE SWP R+SVVACAGV
Sbjct: 10  MRSRSRCVVQDASAPPPTDALDQSCWANMPQELLREVLMRIEASETSWPFRKSVVACAGV 69

Query: 61  CRSWRMISKEIVLTLEVSGRLTFPISLKQVSEYFALVVNLADFRYIWYGFELIGNLNVVA 120
           CRSWR I+KEIV T EVSGRLTFPIS+KQ      L                        
Sbjct: 70  CRSWRAITKEIVKTPEVSGRLTFPISIKQPGSRDPL------------------------ 129

Query: 121 IMMCFTLKNVLN-VVFVYAKIDPAINAFSAWSILLDFTFYRPTYTDYDISLCAEDSSKGS 180
            + CF  +N  N   +++  +  A+N    + +L      RPTYTDY ISL AED SKGS
Sbjct: 130 -LQCFIKRNRSNQTYYLFLSLTSALNDDGKF-LLAARKCKRPTYTDYIISLHAEDLSKGS 189

Query: 181 DTTIVGKLRSNFLGTKFTIFDKQPPHSEAKITKSTKSTKSTQGLSSRPVHLNEVSPNVPS 240
            +T VGKLRSNFLGTKFTIFD QPPHS AKI KS          S+R V+L +VSP VP+
Sbjct: 190 -STYVGKLRSNFLGTKFTIFDGQPPHSGAKIMKSR---------STRLVNLKQVSPKVPA 249

Query: 241 GNYPVAHISYELNVLGSRGPRRMQCVMDAIPASAVEPGGVAPTLAELSLRNIELIPSFPF 300
           GNYPVAHISYELNVLGSRGPRRMQC+MDAIPASAVE GGVAPT  ELSL N+EL PSFPF
Sbjct: 250 GNYPVAHISYELNVLGSRGPRRMQCIMDAIPASAVELGGVAPTPTELSLSNVELFPSFPF 309

Query: 301 WRLNSDTDSLMSKPLDSQEDGILMLRNKTPRWHERLQCWCLNFHGRVTIASVKNFQLVAS 360
            R  S+ DSL+S+PL SQ+DG+L+LRNKTPRWHE+LQCWCLNFHGRVTIASVKNFQLVAS
Sbjct: 310 LRSKSNADSLLSEPLGSQKDGMLVLRNKTPRWHEQLQCWCLNFHGRVTIASVKNFQLVAS 369

Query: 361 REDEQPTDDHDTIILQFGKVGKGLFTMDYRYPISAFLAFAICLSSIDTKIACE 413
            E++ PT +++ IILQFGKVGK LFTMDYRYPISAF AFAICLSS DTKIACE
Sbjct: 370 PENDPPTAENEKIILQFGKVGKDLFTMDYRYPISAFQAFAICLSSFDTKIACE 386

[Close]

BLAST of CmoCh17G002960 vs. ExPASy TrEMBL
Match: A0A1S3C7G9 (Tubby-like F-box protein OS=Cucumis melo OX=3656 GN=LOC103497885 PE=3 SV=1)

HSP 1 Score: 500.4 bits (1287), Expect = 7.4e-138
Identity = 270/413 (65.38%), Postives = 306/413 (74.09%), Query Frame = 0


Query: 1   MSSRSRPVVQDSSAPEPRDDMEHSGWANMPSELLRDIFMRIEESEASWPLRRSVVACAGV 60
           M SRSR VVQD+SAP P D ++ S WANMP ELLR++ MRIE SE SWP R+SVVACAGV
Sbjct: 10  MRSRSRCVVQDASAPPPTDALDQSCWANMPQELLREVLMRIEASETSWPFRKSVVACAGV 69

Query: 61  CRSWRMISKEIVLTLEVSGRLTFPISLKQVSEYFALVVNLADFRYIWYGFELIGNLNVVA 120
           CRSWR I+KEIV T EVSGRLTFPIS+KQ      L                        
Sbjct: 70  CRSWRAITKEIVKTPEVSGRLTFPISIKQPGSRDPL------------------------ 129

Query: 121 IMMCFTLKNVLN-VVFVYAKIDPAINAFSAWSILLDFTFYRPTYTDYDISLCAEDSSKGS 180
            + CF  +N  N   +++  +  A+N    + +L      RPTYTDY ISL AED SKGS
Sbjct: 130 -LQCFIKRNRSNQTYYLFLSLTSALNDDGKF-LLAARKCKRPTYTDYIISLHAEDLSKGS 189

Query: 181 DTTIVGKLRSNFLGTKFTIFDKQPPHSEAKITKSTKSTKSTQGLSSRPVHLNEVSPNVPS 240
            +T VGKLRSNFLGTKFTIFD QPPHS AKI KS          S+R V+L +VSP VP+
Sbjct: 190 -STYVGKLRSNFLGTKFTIFDGQPPHSGAKIMKSR---------STRLVNLKQVSPKVPA 249

Query: 241 GNYPVAHISYELNVLGSRGPRRMQCVMDAIPASAVEPGGVAPTLAELSLRNIELIPSFPF 300
           GNYPVAHISYELNVLGSRGPRRMQC+MDAIPASAVE GGVAPT  ELSL N+EL PSFPF
Sbjct: 250 GNYPVAHISYELNVLGSRGPRRMQCIMDAIPASAVELGGVAPTPTELSLSNVELFPSFPF 309

Query: 301 WRLNSDTDSLMSKPLDSQEDGILMLRNKTPRWHERLQCWCLNFHGRVTIASVKNFQLVAS 360
            R  S+ DSL+S+PL SQ+DG+L+LRNKTPRWHE+LQCWCLNFHGRVTIASVKNFQLVAS
Sbjct: 310 LRSKSNADSLLSEPLGSQKDGMLVLRNKTPRWHEQLQCWCLNFHGRVTIASVKNFQLVAS 369

Query: 361 REDEQPTDDHDTIILQFGKVGKGLFTMDYRYPISAFLAFAICLSSIDTKIACE 413
            E++ PT +++ IILQFGKVGK LFTMDYRYPISAF AFAICLSS DTKIACE
Sbjct: 370 PENDPPTAENEKIILQFGKVGKDLFTMDYRYPISAFQAFAICLSSFDTKIACE 386

[Close]

BLAST of CmoCh17G002960 vs. ExPASy TrEMBL
Match: A0A6J1CCZ9 (Tubby-like F-box protein OS=Momordica charantia OX=3673 GN=LOC111009615 PE=3 SV=1)

HSP 1 Score: 496.9 bits (1278), Expect = 8.2e-137
Identity = 266/413 (64.41%), Postives = 307/413 (74.33%), Query Frame = 0


Query: 1   MSSRSRPVVQDSSAPEPRDDMEHSGWANMPSELLRDIFMRIEESEASWPLRRSVVACAGV 60
           M SRSR VVQD SAPE RD ++ S WANMP ELLR++ +RIE SE +WP R+SVVACAGV
Sbjct: 10  MRSRSRRVVQDGSAPERRDGLDQSCWANMPQELLREVLVRIEASETAWPPRKSVVACAGV 69

Query: 61  CRSWRMISKEIVLTLEVSGRLTFPISLKQVSEYFALVVNLADFRYIWYGFELIGNLNVVA 120
           CRSWR I+KEIV T E+SGRLTFPIS+KQ      L                        
Sbjct: 70  CRSWRAITKEIVRTPEISGRLTFPISVKQPGPRDPL------------------------ 129

Query: 121 IMMCFTLKNVLN-VVFVYAKIDPAINAFSAWSILLDFTFYRPTYTDYDISLCAEDSSKGS 180
            + CF  +N  N   +++  +  A++    + +L      RPTYTDY ISL AED SKGS
Sbjct: 130 -LQCFIKRNRSNQTYYLFLCLTTALSDDGKF-LLAARKCKRPTYTDYVISLHAEDLSKGS 189

Query: 181 DTTIVGKLRSNFLGTKFTIFDKQPPHSEAKITKSTKSTKSTQGLSSRPVHLNEVSPNVPS 240
            +T VGKLRSNFLGTKFTIFD QPPHS AKITKS          S+R V+L +VSP  P+
Sbjct: 190 -STYVGKLRSNFLGTKFTIFDGQPPHSGAKITKSR---------STRLVNLKQVSPKAPA 249

Query: 241 GNYPVAHISYELNVLGSRGPRRMQCVMDAIPASAVEPGGVAPTLAELSLRNIELIPSFPF 300
           GNYPVAHISYELNVLGSRGPRRMQCVMD+IPAS+VEPGGVAPT  E+SL N+EL PSFPF
Sbjct: 250 GNYPVAHISYELNVLGSRGPRRMQCVMDSIPASSVEPGGVAPTQTEISLSNVELFPSFPF 309

Query: 301 WRLNSDTDSLMSKPLDSQEDGILMLRNKTPRWHERLQCWCLNFHGRVTIASVKNFQLVAS 360
            R  S+ D+L+S+PL SQ+DG+L+LRNKTPRWHE+LQCWCLNFHGRVTIASVKNFQLVAS
Sbjct: 310 LRSKSNADNLLSEPLGSQKDGMLVLRNKTPRWHEQLQCWCLNFHGRVTIASVKNFQLVAS 369

Query: 361 REDEQPTDDHDTIILQFGKVGKGLFTMDYRYPISAFLAFAICLSSIDTKIACE 413
            E+E PT +++ IILQFGKVGK LFTMDYRYPISAF AFAICLSS DTKIACE
Sbjct: 370 PENEPPTQENEKIILQFGKVGKDLFTMDYRYPISAFQAFAICLSSFDTKIACE 386

[Close]

BLAST of CmoCh17G002960 vs. TAIR 10
Match: AT2G47900.1 (tubby like protein 3 )

HSP 1 Score: 418.3 bits (1074), Expect = 7.1e-117
Identity = 228/413 (55.21%), Postives = 285/413 (69.01%), Query Frame = 0


Query: 3   SRSRPVVQDSSAPEPRDDMEHSGWANMPSELLRDIFMRIEESEASWPLRRSVVACAGVCR 62
           SRS+ VVQD+S P   D  + S WA+MP ELLRD+ MRIE+SE +WP R++VV+CAGVCR
Sbjct: 31  SRSQRVVQDTSVPV--DAFKQSCWASMPPELLRDVLMRIEQSEDTWPSRKNVVSCAGVCR 90

Query: 63  SWRMISKEIVLTLEVSGRLTFPISLKQVSEYFALVVNLADFRYIWYGFELIGNLNVVAIM 122
           +WR I KEIV   E+S +LTFPISLKQ     +LV                         
Sbjct: 91  NWREIVKEIVRVPELSSKLTFPISLKQPGPRGSLV------------------------- 150

Query: 123 MCFTLKNVLN-VVFVYAKIDPAINAFSAWSILLDFTFYRPTYTDYDISLCAEDSSKGSDT 182
            C+ ++N  N   ++Y  ++ A +      +L    F RPT TDY ISL  +D S+GS+ 
Sbjct: 151 QCYIMRNRSNQTYYLYLGLNQAASNDDGKFLLAAKRFRRPTCTDYIISLNCDDVSRGSN- 210

Query: 183 TIVGKLRSNFLGTKFTIFDKQPPHSEAKITKSTKSTKSTQGLSSRPVHLNEVSPNVPSGN 242
           T +GKLRSNFLGTKFT++D QP +   ++T++          SSR + L +VSP +PSGN
Sbjct: 211 TYIGKLRSNFLGTKFTVYDAQPTNPGTQVTRTR---------SSRLLSLKQVSPRIPSGN 270

Query: 243 YPVAHISYELNVLGSRGPRRMQCVMDAIPASAVEPGGVAPTLAELSLRNIELIPSFPFWR 302
           YPVAHISYELNVLGSRGPRRMQCVMDAIPASAVEPGG APT  EL   N++  PSF F+R
Sbjct: 271 YPVAHISYELNVLGSRGPRRMQCVMDAIPASAVEPGGTAPTQTELVHSNLDSFPSFSFFR 330

Query: 303 LNS-DTDSLMSKPLD-SQEDGILMLRNKTPRWHERLQCWCLNFHGRVTIASVKNFQLVAS 362
             S   +SL S P   +Q++G+L+L+NK PRWHE+LQCWCLNF+GRVT+ASVKNFQLVA+
Sbjct: 331 SKSIRAESLPSGPSSAAQKEGLLVLKNKAPRWHEQLQCWCLNFNGRVTVASVKNFQLVAA 390

Query: 363 REDEQPTDDHDTIILQFGKVGKGLFTMDYRYPISAFLAFAICLSSIDTKIACE 413
            E+     +H+ +ILQFGKVGK +FTMDY+YPISAF AF ICLSS DTKIACE
Sbjct: 391 PENGPAGPEHENVILQFGKVGKDVFTMDYQYPISAFQAFTICLSSFDTKIACE 406

[Close]

BLAST of CmoCh17G002960 vs. TAIR 10
Match: AT2G47900.2 (tubby like protein 3 )

HSP 1 Score: 418.3 bits (1074), Expect = 7.1e-117
Identity = 228/413 (55.21%), Postives = 285/413 (69.01%), Query Frame = 0


Query: 3   SRSRPVVQDSSAPEPRDDMEHSGWANMPSELLRDIFMRIEESEASWPLRRSVVACAGVCR 62
           SRS+ VVQD+S P   D  + S WA+MP ELLRD+ MRIE+SE +WP R++VV+CAGVCR
Sbjct: 31  SRSQRVVQDTSVPV--DAFKQSCWASMPPELLRDVLMRIEQSEDTWPSRKNVVSCAGVCR 90

Query: 63  SWRMISKEIVLTLEVSGRLTFPISLKQVSEYFALVVNLADFRYIWYGFELIGNLNVVAIM 122
           +WR I KEIV   E+S +LTFPISLKQ     +LV                         
Sbjct: 91  NWREIVKEIVRVPELSSKLTFPISLKQPGPRGSLV------------------------- 150

Query: 123 MCFTLKNVLN-VVFVYAKIDPAINAFSAWSILLDFTFYRPTYTDYDISLCAEDSSKGSDT 182
            C+ ++N  N   ++Y  ++ A +      +L    F RPT TDY ISL  +D S+GS+ 
Sbjct: 151 QCYIMRNRSNQTYYLYLGLNQAASNDDGKFLLAAKRFRRPTCTDYIISLNCDDVSRGSN- 210

Query: 183 TIVGKLRSNFLGTKFTIFDKQPPHSEAKITKSTKSTKSTQGLSSRPVHLNEVSPNVPSGN 242
           T +GKLRSNFLGTKFT++D QP +   ++T++          SSR + L +VSP +PSGN
Sbjct: 211 TYIGKLRSNFLGTKFTVYDAQPTNPGTQVTRTR---------SSRLLSLKQVSPRIPSGN 270

Query: 243 YPVAHISYELNVLGSRGPRRMQCVMDAIPASAVEPGGVAPTLAELSLRNIELIPSFPFWR 302
           YPVAHISYELNVLGSRGPRRMQCVMDAIPASAVEPGG APT  EL   N++  PSF F+R
Sbjct: 271 YPVAHISYELNVLGSRGPRRMQCVMDAIPASAVEPGGTAPTQTELVHSNLDSFPSFSFFR 330

Query: 303 LNS-DTDSLMSKPLD-SQEDGILMLRNKTPRWHERLQCWCLNFHGRVTIASVKNFQLVAS 362
             S   +SL S P   +Q++G+L+L+NK PRWHE+LQCWCLNF+GRVT+ASVKNFQLVA+
Sbjct: 331 SKSIRAESLPSGPSSAAQKEGLLVLKNKAPRWHEQLQCWCLNFNGRVTVASVKNFQLVAA 390

Query: 363 REDEQPTDDHDTIILQFGKVGKGLFTMDYRYPISAFLAFAICLSSIDTKIACE 413
            E+     +H+ +ILQFGKVGK +FTMDY+YPISAF AF ICLSS DTKIACE
Sbjct: 391 PENGPAGPEHENVILQFGKVGKDVFTMDYQYPISAFQAFTICLSSFDTKIACE 406

[Close]

BLAST of CmoCh17G002960 vs. TAIR 10
Match: AT2G47900.3 (tubby like protein 3 )

HSP 1 Score: 415.6 bits (1067), Expect = 4.6e-116
Identity = 229/414 (55.31%), Postives = 285/414 (68.84%), Query Frame = 0


Query: 3   SRSRPVVQDSSAPEPRDDMEHSGWANMPSELLRDIFMRIEESEASWPLRRSVVACAGVCR 62
           SRS+ VVQD+S P   D  + S WA+MP ELLRD+ MRIE+SE +WP R++VV+CAGVCR
Sbjct: 31  SRSQRVVQDTSVPV--DAFKQSCWASMPPELLRDVLMRIEQSEDTWPSRKNVVSCAGVCR 90

Query: 63  SWRMISKEIVLTLEVSGRLTFPISLKQVSEYFALVVNLADFRYIWYGFELIGNLNVVAIM 122
           +WR I KEIV   E+S +LTFPISLKQ     +LV                         
Sbjct: 91  NWREIVKEIVRVPELSSKLTFPISLKQPGPRGSLV------------------------- 150

Query: 123 MCFTLKNVLN-VVFVYAKIDPAINAFSAWSILLDF-TFYRPTYTDYDISLCAEDSSKGSD 182
            C+ ++N  N   ++Y  ++ A  +      LL    F RPT TDY ISL  +D S+GS+
Sbjct: 151 QCYIMRNRSNQTYYLYLGLNQAAASNDDGKFLLAAKRFRRPTCTDYIISLNCDDVSRGSN 210

Query: 183 TTIVGKLRSNFLGTKFTIFDKQPPHSEAKITKSTKSTKSTQGLSSRPVHLNEVSPNVPSG 242
            T +GKLRSNFLGTKFT++D QP +   ++T++          SSR + L +VSP +PSG
Sbjct: 211 -TYIGKLRSNFLGTKFTVYDAQPTNPGTQVTRTR---------SSRLLSLKQVSPRIPSG 270

Query: 243 NYPVAHISYELNVLGSRGPRRMQCVMDAIPASAVEPGGVAPTLAELSLRNIELIPSFPFW 302
           NYPVAHISYELNVLGSRGPRRMQCVMDAIPASAVEPGG APT  EL   N++  PSF F+
Sbjct: 271 NYPVAHISYELNVLGSRGPRRMQCVMDAIPASAVEPGGTAPTQTELVHSNLDSFPSFSFF 330

Query: 303 RLNS-DTDSLMSKPLD-SQEDGILMLRNKTPRWHERLQCWCLNFHGRVTIASVKNFQLVA 362
           R  S   +SL S P   +Q++G+L+L+NK PRWHE+LQCWCLNF+GRVT+ASVKNFQLVA
Sbjct: 331 RSKSIRAESLPSGPSSAAQKEGLLVLKNKAPRWHEQLQCWCLNFNGRVTVASVKNFQLVA 390

Query: 363 SREDEQPTDDHDTIILQFGKVGKGLFTMDYRYPISAFLAFAICLSSIDTKIACE 413
           + E+     +H+ +ILQFGKVGK +FTMDY+YPISAF AF ICLSS DTKIACE
Sbjct: 391 APENGPAGPEHENVILQFGKVGKDVFTMDYQYPISAFQAFTICLSSFDTKIACE 407

[Close]

BLAST of CmoCh17G002960 vs. TAIR 10
Match: AT1G76900.1 (tubby like protein 1 )

HSP 1 Score: 327.4 bits (838), Expect = 1.6e-89
Identity = 198/453 (43.71%), Postives = 268/453 (59.16%), Query Frame = 0


Query: 4   RSRPVVQDSSAPEPRDDMEHSGWANMPSELLRDIFMRIEESEASWPLRRSVVACAGVCRS 63
           +SR  VQDS   +    ++ + WAN+P ELLRD+  R+EESE+ WP RR VVACA VCRS
Sbjct: 35  KSRGSVQDSHEEQLVVTIQETPWANLPPELLRDVIKRLEESESVWPARRHVVACASVCRS 94

Query: 64  WRMISKEIVLTLEVSGRLTFPISLKQVSEYFALVVNLADFRYIWYGFELIGNLNVVAIMM 123
           WR + KEIV + E+SG++TFP+SLKQ                              A M 
Sbjct: 95  WRDMCKEIVQSPELSGKITFPVSLKQPGPR-------------------------DATMQ 154

Query: 124 CFTLKNVLNVVF-VYAKIDPAINAFSAWSILLDFTFYRPTYTDYDISLCAEDSSKGSDTT 183
           CF  ++  N+ + +Y  + PA+   +   +L      R TYT+Y IS+ A+  S+ S+ T
Sbjct: 155 CFIKRDKSNLTYHLYLCLSPALLVENGKFLLSAKRIRRTTYTEYVISMHADTISRSSN-T 214

Query: 184 IVGKLRSNFLGTKFTIFDKQPPHSEAKITKSTKSTKSTQGLSSRPVHLNEVSPNVPSGNY 243
            +GK+RSNFLGTKF I+D QP ++ + I ++ +      GLS R  +   VSP VPSG+Y
Sbjct: 215 YIGKIRSNFLGTKFIIYDTQPAYN-SNIARAVQPV----GLSRR-FYSKRVSPKVPSGSY 274

Query: 244 PVAHISYELNVLGSRGPRRMQCVMDAIPASAVEPGGVAP---------TLAELSLRNIEL 303
            +A +SYELNVLG+RGPRRM C M++IPAS++  GG  P         ++ + S R+I  
Sbjct: 275 KIAQVSYELNVLGTRGPRRMHCAMNSIPASSLAEGGTVPGQPDIIVPRSILDESFRSITS 334

Query: 304 IPSFPF-WRLNSDTDSL----MSKPLDSQEDGI-----------LMLRNKTPRWHERLQC 363
             S    +  ++D  S     +  PL   ++ +           L+L+NK PRWHE+LQC
Sbjct: 335 SSSRKITYDYSNDFSSARFSDILGPLSEDQEVVLEEGKERNSPPLVLKNKPPRWHEQLQC 394

Query: 364 WCLNFHGRVTIASVKNFQLVASREDE---------------QP---TDDHDTIILQFGKV 413
           WCLNF GRVT+ASVKNFQL+A+ + +               QP   TD  D IILQFGKV
Sbjct: 395 WCLNFRGRVTVASVKNFQLIAANQPQPQPQPQPQPQPLTQPQPSGQTDGPDKIILQFGKV 454

[Close]

BLAST of CmoCh17G002960 vs. TAIR 10
Match: AT1G76900.2 (tubby like protein 1 )

HSP 1 Score: 327.4 bits (838), Expect = 1.6e-89
Identity = 198/453 (43.71%), Postives = 268/453 (59.16%), Query Frame = 0


Query: 4   RSRPVVQDSSAPEPRDDMEHSGWANMPSELLRDIFMRIEESEASWPLRRSVVACAGVCRS 63
           +SR  VQDS   +    ++ + WAN+P ELLRD+  R+EESE+ WP RR VVACA VCRS
Sbjct: 35  KSRGSVQDSHEEQLVVTIQETPWANLPPELLRDVIKRLEESESVWPARRHVVACASVCRS 94

Query: 64  WRMISKEIVLTLEVSGRLTFPISLKQVSEYFALVVNLADFRYIWYGFELIGNLNVVAIMM 123
           WR + KEIV + E+SG++TFP+SLKQ                              A M 
Sbjct: 95  WRDMCKEIVQSPELSGKITFPVSLKQPGPR-------------------------DATMQ 154

Query: 124 CFTLKNVLNVVF-VYAKIDPAINAFSAWSILLDFTFYRPTYTDYDISLCAEDSSKGSDTT 183
           CF  ++  N+ + +Y  + PA+   +   +L      R TYT+Y IS+ A+  S+ S+ T
Sbjct: 155 CFIKRDKSNLTYHLYLCLSPALLVENGKFLLSAKRIRRTTYTEYVISMHADTISRSSN-T 214

Query: 184 IVGKLRSNFLGTKFTIFDKQPPHSEAKITKSTKSTKSTQGLSSRPVHLNEVSPNVPSGNY 243
            +GK+RSNFLGTKF I+D QP ++ + I ++ +      GLS R  +   VSP VPSG+Y
Sbjct: 215 YIGKIRSNFLGTKFIIYDTQPAYN-SNIARAVQPV----GLSRR-FYSKRVSPKVPSGSY 274

Query: 244 PVAHISYELNVLGSRGPRRMQCVMDAIPASAVEPGGVAP---------TLAELSLRNIEL 303
            +A +SYELNVLG+RGPRRM C M++IPAS++  GG  P         ++ + S R+I  
Sbjct: 275 KIAQVSYELNVLGTRGPRRMHCAMNSIPASSLAEGGTVPGQPDIIVPRSILDESFRSITS 334

Query: 304 IPSFPF-WRLNSDTDSL----MSKPLDSQEDGI-----------LMLRNKTPRWHERLQC 363
             S    +  ++D  S     +  PL   ++ +           L+L+NK PRWHE+LQC
Sbjct: 335 SSSRKITYDYSNDFSSARFSDILGPLSEDQEVVLEEGKERNSPPLVLKNKPPRWHEQLQC 394

Query: 364 WCLNFHGRVTIASVKNFQLVASREDE---------------QP---TDDHDTIILQFGKV 413
           WCLNF GRVT+ASVKNFQL+A+ + +               QP   TD  D IILQFGKV
Sbjct: 395 WCLNFRGRVTVASVKNFQLIAANQPQPQPQPQPQPQPLTQPQPSGQTDGPDKIILQFGKV 454

The following BLAST results are available for this feature:

BLAST of CmoCh17G002960 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VY21	1.0e-115	55.21	Tubby-like F-box protein 3 OS=Arabidopsis thaliana OX=3702 GN=TULP3 PE=1 SV=1	[more]
Q10LG8	6.5e-107	53.44	Tubby-like F-box protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=TULP6 PE=...	[more]
Q8H485	8.8e-104	51.83	Tubby-like F-box protein 11 OS=Oryza sativa subsp. japonica OX=39947 GN=TULP11 P...	[more]
Q9ZP59	2.3e-88	43.71	Tubby-like F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=TULP1 PE=1 SV=1	[more]
Q69U54	8.8e-88	42.32	Tubby-like F-box protein 12 OS=Oryza sativa subsp. japonica OX=39947 GN=TULP12 P...	[more]

BLAST of CmoCh17G002960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H3G5	1.3e-190	84.50	tubby-like F-box protein 3 OS=Cucurbita moschata OX=3662 GN=LOC111460144 PE=3 SV...	[more]
A0A6J1L1K1	1.1e-176	80.15	tubby-like F-box protein 3 OS=Cucurbita maxima OX=3661 GN=LOC111499019 PE=3 SV=1	[more]
A0A5A7SVJ4	7.4e-138	65.38	Tubby-like F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]
A0A1S3C7G9	7.4e-138	65.38	Tubby-like F-box protein OS=Cucumis melo OX=3656 GN=LOC103497885 PE=3 SV=1	[more]
A0A6J1CCZ9	8.2e-137	64.41	Tubby-like F-box protein OS=Momordica charantia OX=3673 GN=LOC111009615 PE=3 SV=...	[more]

BLAST of CmoCh17G002960 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G47900.1	7.1e-117	55.21	tubby like protein 3	[more]
AT2G47900.2	7.1e-117	55.21	tubby like protein 3	[more]
AT2G47900.3	4.6e-116	55.31	tubby like protein 3	[more]
AT1G76900.1	1.6e-89	43.71	tubby like protein 1	[more]
AT1G76900.2	1.6e-89	43.71	tubby like protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000007	Tubby, C-terminal	PRINTS	PR01573	SUPERTUBBY	coord: 324..341 score: 61.62 coord: 166..182 score: 35.03 coord: 390..412 score: 70.95 coord: 342..358 score: 82.35 coord: 369..388 score: 61.14 coord: 241..268 score: 53.57
IPR000007	Tubby, C-terminal	PFAM	PF01167	Tub	coord: 160..407 e-value: 1.5E-80 score: 270.6
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 26..76 e-value: 6.1E-9 score: 35.5
IPR025659	Tubby-like, C-terminal	GENE3D	3.20.90.10	Tubby Protein; Chain A	coord: 151..412 e-value: 1.8E-74 score: 252.3
IPR025659	Tubby-like, C-terminal	SUPERFAMILY	54518	Tubby C-terminal domain-like	coord: 158..412
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 213..230
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 206..230
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26
None	No IPR available	PANTHER	PTHR16517:SF80	TUBBY-LIKE F-BOX PROTEIN 9	coord: 3..90
None	No IPR available	PANTHER	PTHR16517	TUBBY-RELATED	coord: 3..90
None	No IPR available	PANTHER	PTHR16517	TUBBY-RELATED	coord: 158..412
None	No IPR available	PANTHER	PTHR16517:SF80	TUBBY-LIKE F-BOX PROTEIN 9	coord: 158..412
IPR018066	Tubby, C-terminal, conserved site	PROSITE	PS01200	TUB_1	coord: 342..355
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 21..69

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh17G002960.1	CmoCh17G002960.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0005515	protein binding