CmoCh17G002200 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh17G002200
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	XS domain-containing protein
Location	Cmo_Chr17: 1292783 .. 1303540 (-)
RNA-Seq Expression	CmoCh17G002200
Synteny	CmoCh17G002200

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGGAGGTAGCAATACCACCAGGTCGTCTCAGAAGCCTTCTTCTGCTTCCGCCGCTCCTTCCAACCGGAAATCCCGCTGGGAGTCCTCCACCAACAATCCTCCGGCCGATCCCAAATCCGACTCTAAATCTTCCAAACCCTATAATCCTTCCTCGAAATCTACAATCAGTCCCAATTCCACTCATCCTAAGCATTCTGCCGACAAGACTGTTAATCCAACTCCGGCCTCGGCTCCACTTCCGTCTCCTGGCGTTCCACTTCCCTTTCCCGACCCCTCGGCTCTTGGCCCACCACCTCCACCGTCTTATGGATTCCACATGCTTGAACGCCGCACGATTGTTCTTGCGGATGGCAGTGTACGGTCGTACTTTGCTCTCCCTCTCGACTACAAAGATTTTACTCCGCCTGCAAGGTCCATGGATCTCGCTGGTCGGTTTTTACCTATGGGGTCTGGTGGTCCTGGACCTGGTCACGAATATGGTGGATTTGATCATCGGTTTCCCCCAGGTGGCCCTATGAGCCCAGATGAGTTTAGGGGTGTTCGGGAAGAACAATTTGCGCGTGCTAGGCCTCAAGATCACTGGAATTCTCGAGGGACTAACGAGCGTGGTGGCCCTGCAGAATCGTCGTTGAAAAGGAAATTCAATGACGATAATGAGAAGGACAGGAAAGATGAGAAAGACGAATTATCCAGGCGACAGCAGCAATTTTTACACAATGGGAATGCAAATGGGTTCCTTACGGGTTTCGGCGAACGACGGGGTGATTTTTTGGCGGGAACTAGTGATCCATATGGTCTAACAGAGGATATGAGGTTCTCGAAGTACATGCGAGATGGCGGGAGTTATGTAAATGAAGGTTTGAGGCTAGGTAGCGGTAACAACGTTGCTCCTAAATATTTCGAAGTTGACCAGAATGCATTGAGAAAGGCATTTCTTCATTTTGTGAAAACTATCTACGAAAACGCTAATCAGAAGAAGAATTATTTGGAGGATGGGAAGCTCGGGCGTCTTCAATGTCTTGCTTGTGCAAGGTTTGATGCCGCCGGATTCTTTGTGCTTTCTCTCTTTGTTTTGCACTATTTCTATATAATGCTTATGAATAATGCTTCTTTCAGTGCATCCGGGTTAGTTAATAAATTGCTATGTTTGTTTGCAACTGTCTGTTGTGATTGAGAAGGAAGTGAATGCGTAAAGTTTAGGCTTCTTGATTGCTTGCCCTGATAATTATGTTTCTGCTGCTGCTGTTTCTTTTAAGTATGCTGGTAAAAATGAGTATGGACAGTGACTTGCTGTTGAGTGTCGGAGCCTATGGTTTGTCGGACTTTTCCTCCTATGCCTTCTCCCACCAAGTGTGATCAAAATAGGGGTCAAATATTATGCGTTCATTGTACGTTTTGTAATTTTGGATTTGAAATTTTTAACTGAATTGACGAGAAGAAGGGAAGAGGTAAAATGGAAGGGTAAGGAGAACCATACTCCCTTTTAGAATCTTTTCCCTGCATCTATTTCAAATATATTTAACTGTTTGCACTTGCTGTTGTTGTGACCAAGAATGAGATGAATGCATACGCTGCCCTTTCCTTAAAACATGTTTCTATGCTGCTGCTTTTCCTTATGAGTGTTGTGGAAAAAGCATTTGAGGAAAGTATGGATGCCGTCGTTGATTGTTGAGTGGCCAATGGTTTTTTTGTGCTCTCCTCCTATGCTATTCTTCTTCATATTGCGTAATATAGGGTTGTGGTGTAAGTGGCGTGGTCGGTCATCAAGTTCAATGCCTCTCTTTGGCATTTGCAATGACCCGATTTTCCACACATGTACCGGTATAAGTTGTTACTTAAAAACTAGCAATTTTATCATTTAAAATCAATTGAAAGATGCAAAAATAGATGAGAGAAATTTAGGATGCATGTTGGTGGAGAAGATGGTTATGGAGCAACTCTGGAGTTTTTTATGTATGCTTTATTTGAATCACTTCTGTTTGAATTGGTTCTATGGATTTGATTTGTAGTAGAAAAACTCCTAGGTTGTGGGGACTAGAGAGATTGAAATGGTGCTTTTCAATTGGTATTAGGATTGTTGAATTATTTTGGTTAACCCACATGCACCCTAAAGTTCTTTTAAAGGTACCCCAAACATGTTTTCTCTCATATATTTTTGCGTTCTTTTAATTGATTTTAAATTATAAAATTGTAAGCTTTTTAAGTAGCTTTGATTTTTACATGTATAGAATGTCGGGTCTGTTGAGGATTATTGGAATTGGGAGTGTCCCACATTGGTTAATTTAGTGGAAGATCATGGGTTTATAAGTGAGGAATACTATCTCCATTGGTATGAGGCCTTTTGGGGAAGCCCAAAGCAAAGCCATGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGGAGAGTTGTGATTCCTAACAGGGTCGTTACAAGTGACATCAAAGCAGTGCCTCTTCCAATAGGATATGGTTCGAGGACAAACCAATGTAGAAGCGGGTGGGCATGTGACAATCGAGTGAAAGAGAGTTACATGAATGGACTGAAACCACATTCGTCTGAGAGTGGTCTTGAGGAATGATTGAGAAAGACTTTAAAAGGATTGAATTTACTACCTATACTAACAAGATACACTATCTGTTTCGGTTAAATATGTTTTGTTTGGAGTAATTCTATGTTGGGTGACCTTTTAGGAAGTATATGAGTGAGAACAAAGCATGTAAAAAAGACCCATATTGGTTTTGGGATAGTAGTTCACCTCTTAGAAGCAACAAACAGGTAATGTGGTTATGTGGTTATGTTGCAGGGGAATGTTGGACCGTAGGTCCTGATCTAGATTCCAATTTGTGATCCAAATCCTAGGCTTGTGTAACATCAATCTCAGAGGATTTTTTGTATTTTTTTTTCCGTTAGGCTTAGTCATCTTGGATTATACCTTTTTTGCATAATTAGTTAGTCTTGACTTTGTTTTGGCTTCTTTTGGCATGCTGTTTTTTTTTTTTTTTTTTTTTTTGTGCTTTTTTTTATTTTTTTTTTGACAACTCATCTCNCTCTTTTTAATGTAAAACAAAGATGGTTTGTGCAAAACACTACCCCAAACCGGCATATTGGGGTAGGATAATCAATTTTGAAACTAATTTCTTAATAATTAGATCGAATTGGATTGACCAACCCATTTATTTCTGGGGTTTATACATTAGACAACAGTATATTTCATTGACTGGAGGGACTTAAGCATATTTTTGTTTTCTAACTGATGTGAATGCTGGGAATGCTTTTGCACAGTTTGTGTAATTACCGCAAACATACTCTTCTTGCGGTTTCTGGCTATTCCTAGAAGGGTTTTCAGTGAAAGTTTAGAGTCTTGTTGATAAGATACGGTTTTGGTCTGTCTTTCCTTTTTTCCTCATCTTTTTAATTCCTTTATATGAGTTCTCAATGTGATGCAATAATAATTGGTTATGTGATGCTACTTTTCTTCGAGTAGGGTCGTTTTAGGTTTTTTTCCCCTGTTTTTTTCTATTTTTTATTCCACTGTATTAGTATTTTTCTTTTGTTTAGTTATCTTTGTTTTTTTTCTTTTTTTTTTTTTGGGAGAATATGGTTGCATCACTGGACAAGTTCTGTAACCCTGTAACTTCAGATATTTTTTATTATTTTCATTGCAATATGGATTCACCTTTGATATCGTGCTTTGGTATAGACGTGGTCTTTTTAAACCATGTGATACAGTTTGATGGCTTGTTCAGATGAAATTACTTCCTTGTTTCCAACCTGTGGTTTTAGGGCATGGTGTACCATCAAAAGATGTATTTAAAAAAAATTTGTTGGCTGTATGGAGTGAACTAGCTGGTTATATATCGTCGAAGATCTCGTACCTTTAACTTCTTCTTATGTAGTTAATAAGGGTAAAATAGTTTGCATTAGCTACTGCTTTGTTGGTAAATGTTTGTTAGGCTCTAATCCCAGCCTGTAAATGGGATATTTGTACACTGTAGTTGACTTGATGTTGTAATCATAATCAATGAAAGAGACTTGTTTAGCATATTTTATGAAGCTTCGATTCCTGCCTATTTCAATTTGAAGTGTATGTGGAATCAGATGGCCAAATGGGCTGCTTTGATGTGATTGAGGTGGGAAGTTTCTCATTGAATGAATAATTTCTTCACTTCTAGAGTCTGGTTATGTGACAATCCAAGCCATTTAACTTGCAAGTCTTTACTTTTTGAAATTACCGAGAGAATGTGATAGATCCTACCTTTTTATGCCCACTGTTAAAAAGAAAAAAAAAACATCTCTTATGAGGTGTCAATGTTTAGGATAGTGGCAGACATGATGATTGTACGTGCCTGTTCTTTGCTCCGGGAACGAACTAGTTCATTACTTGTTTCCTTGGTGTCATTCCTCCTTATGTTTATGGAGGTCTGTTTTGAGTAGTTTTAGCTTACCCATCGTTACCTTAGAAACTTAAAAAGATTTGCTTGATCTTCCTTTTGGGAGCATTATCGCATTTGTCTTATCAGTTGGGCTTCCTGTTGGAAGGACTCGTTTCTTTTAAAGAATTGTATTCCTTGGATTAAATGCCTTACAACTTTGAGATTTCTTGGCAACCAAAGATCTCAAGGTCAATTAGTTGTCTCGTGAGAATAGTTGGGTTACTTAAAAGCTAGCTCAGACGCTCAATTGGTATTCCTACAAAAAAAAAGCAAAGCTCGTTCAGTACAAACTTTGTTAGTTGCATTTGCTATTTAAATGGTGTACCTGTTCTTTTATTGGTATGCTCCTTATAATGTATTCCTATGGGCTACCAACCATGCGAATATGAACCTTGTTATCAATCATTGGTCCCAATTATTGTGCCTGCCTGTTCGTTAATAAACTGCTTCTCATCTGAAAAGTATGTTTGAATTCCCAATAGTGTGGAAGAAACCCCTTGAAACACAGAGACCATAAATTTTAGGTATTTTGTTATTGAGTTCCTTTCAAAATGAAATCGAATGAATTTAAAGAATCTTAAGTCATGGAGGAAGCATCTATGATGCTCTCAGTGACCAAGATCCTTCACCAATGACATCGCAAATGTTGACGTGGATAAATTTGGTGACAGGAGAACCTGAGATGGAAAAAGTTTGCATCTTCTGTTATTTATCTAGATTGAATCTTCCATTTCTGTTTGGGATTATGAAGCTGGAACTACTGCAGTTGAAAAGTGATTGTTGGTTTGATGTTAACCCTTTTAAACCAGCAGTTTTGAGACCTAATTTATGTTCGATGAAGATTTTATAGTTTGTAGTGTAATTGATGCATGTTTTCTGTGCTAGATGATGCTGTTTGCATTTTTGGAGTCTTCGTTTCCACCCACAACTTACCATTATGAGTGGTGTTTACCACTTATTCCCATTTTGGTTCAAATTTATAGGCTTATATAATAGTGTGAACCTATTAAAAAATCATTCTTTGGGCCTCTAAAGAACGTTGCCCCCTCCTTCACATGCTTACTTACAGGTCCTCTAGAGATTTTCCAGATATGCATGGCCTTATTATGCACACATACAACTCTGATAGTGCTGACTCGCAAGTGGATCATTTGGGTTTACACAAAGCTCTTTGTGTATTAATGGGGTGGAACTACTCAAAGCCTCCTGATAATTCAAGAGGGTACCGTTTTCTATCTGCTGACGAAGCAACAGCTAACCAGGAGGATTTGATTATGTGGCCTCCTCTAGTTATCATCCACAATACAATTACTGGAAAGAGTAAAGATGGGCGCATGGAGGGTTTGGGAAACAAGGCAATGGATAGTAAAATTAGAGGTATCATGCACTTTTTTACATTTCTTTATCCTTCATTGATGCTTGAGTAGATTTACCTCCTTCTAGGTAGAATAAGGTCTCTAATCAACTAGGCCATACTGCACCTACAACTTTACTATCTACAACTTCATTTAGAAGAACATAAAACATCCCTGGAATTTCTCAAGTCTGTCACAGATGACTATCTGTGTCAGGCTATAAATTTAGAATGCGGAGTAATTTAATGATCTTTTAGTTGCTGATGAGAACCATAGTTATATTTATCGTATTTTCTTAGTTGATGAACCTAAAGTTACAATTTCTGAATCTTCCATGAATGAGTTGATGGCACACGTGGAACCTTATACTCATTCTGGTATTGTCTTGTTTTAATGTTAGTAAATCTGTTTCAAAGCCAATTGGAAGGGATTTTTTTTTAACACTTATGCTCAAGGAGGACACCTTATCCTCCCTCTTTCCTAGTATTCTTTCTGGACGAAATCTCACTTATTGATAGAATGCGAATGAAGCTGTTCTCTTTTCTCCAGTTGATTATGTTCAAGTATTTATAGGGAGGAGGGGCTGCACTGGACAAGTTCTTTTTTTCCCCCTAAAAAAAAAAAAATCTTTTAATAATTTATGTATCAGGTCTCCTCTCTCACCCTCACCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCCCCCCCCCTTCTCTCTCTCAAGTCCATCAGTCATAGATGATACATCTCTTGGGCAAGCAGTTTAGAAAGTGGAGTACCTTAATTATTTATTAGTACCATTGCTGAAGAACTATGATTATAGTTATTGGCTTCATACTAAACCTCTTGCATGAAGTACCGAATTATTTATTAGTATGGTTGCTGATCTGAATTAGGTGATATTTACCTGCTTCATAGCGTAATTATAATTAATGTGCCTAAAGTTTTTATCTGCATCCCCCATGGATAAGTTGAAGGCACGTGGAATCTTTTAGGGTTTCTGTCATTGTCCTGTTTCTGTGTTGATGAAGCTGTTTCACAGCTCATTTGAAGGGCTTTTTGTAATCCTTTTCTATTTAACATCCATAAATCTCTGTAGTTGTTTTGGAGTCCGTGGTGATTTTTTTTTTGTTATCCTACAATCTTGACTGGCTAACATTTGTGAGATACTAATAGCTATGCAGTCTTGAGAGAGTTTTACCTGAGAAATATGCATTTTACTACAGGCATGTACTCTGTGTGTTGGTTGTGATTTTCAGTATCTCTCTGCTTTTCAATTGTTGTGTCTAACATAATTTTTATTCCTTGTTTTAAATTAAACCTATTTTCTTCAATTAGTTTGTTTGGTTTTATATTATATTATATTATATATAGGCATAAGTTTTATTTACTTAGCGGCAGGTTACAGTAGATCTTTTGATGATCAATTCCGTTGATGCATCTGCTTTTACTCTTATGCAACCTCTTAATTTCATCTTCTATACATTTTAGTTATTTTAACATAGACTGTAACTTCAATCTCTTATTTCAGCAGTATATTTTTGGATTCTATTCTTCATTCGTCTCTAGTGTGGGGGACAGTAGAGGTAATTATAGGCTCTGCAATTAAGTTACTTTTCAATCCCTAACGCAAGAGTTAGATCCAGATAAATGGGGGAGGCATTTCATATTAAAAGCTTCACTTAACATTAGGGCAACTTTGTTTGTGGTCCTTCCTTTGTTTCATAACAGTGGGGGGTCGACTGTTTATTATTAGTTTTATTAATGCTAGTTTCTAGTATGGTGTTTTGTTAATTGGTTGACATGATAATAATTTGGCTCTGATTCTCTTATAATTTATCATGATATTTGATTTGGTTTTCCCATATTCTCAAGCTTCCTATACTGGGTGCTTGGATTTTTATGCCCTAGTTGTTTTTGTTTTCAACGATCATGCCATATACCATGTGGGAACTGTAGATTCTGAAGCTTTTTAAGCTTTAGTTAACGGAGAGTTGTAAAAATGCCTATTTAGTTTTTACACAGCCACCTCTGTTCTTAGTTTAAGGCGTTTACCTTTTATAATCTAATGCTAGTTTGCTATCAATATGTTGGCGTTTAGCTGTCTTGACGAGTCATTTTGCCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGNGGGTGGGAAGTCCAAGTCTTTATATGGAAGGGATGGTCATTTGGGCACAACTTTGATCAAGTTTTCAGGTGACCAGTCTGGCCTCAATGAAGCCAAGAGACTGTCTGAATTCTTTGAGAAGGACAATCATGGACGTACAGGTTGGGCTCGTGTACGACCTGCAGCATTTAGCAGGGATGATGATAAAAATCCAAACCTTGTTAAGGTGGATGAAAAGTCTGGAGAGAGGAAAAGGATTTTTTATGGCTATCTTGCAACTGCAGCTGATATGGAAAAAGTTGATTTTGATACAAGGAAAAAGGTTACCATAGAGAGCTGTAGGGATTTCAAACTGTCCAGGTAGAATATCTTGATAAATATATAGTTCGACATGCCTTCAGTTTGTAACCTGGGTTAAACTGCAACACTCAAATCAACCTCATTTTTGAGCTTGTCGATGGTTTGTGGATGAAATCTTCACCAAACAGCTTGTTTGAATGTTGACCTCTGTTATGGGGGAGGTGGGTGGTTGTTTGGTCTGCCAGTAACATTACTCGAGGAATTTCCCTGGATTTGCTGCGTAATTTTAATTTTACTGTAGCACGAATGTGTATGGTAGGATGCGGAACATGGATCTGGTTGTTTGTCAACCGTTTTAAATCCTAATGATTAAAAAAGCTTGAATTATTTGTCTGTTGTCACATAAAGAAACCTGCACAATCCTCCATCGTAACTCTAGAACCTGCTATTTCTTGGCAGCGATACCAACATCCGTTAGAACCGGAAATAATCACAATTGAATATAATTGAGTCGCTGTATAAGCATCTTGAAAGGAAGCTAATTTTGAGTAAGCAAGCCTTCCGATGCTCGGTTCTTTTCAGGACAAGCATACAATTTTAAAGTACATGCAGAATCAACAACACTGGGCTGTCTGCAGTTACATGTCTGCGTGCACTGCTTGTGTTTCATAAGGGCTGCGTTGCTTGGTTTTAAAACAACAGGCACACTTAGAGTTGGAGCGACCGTGGGTGGGTGCTTTGACATTCCAATTGATGAATATAGTTATTATGGATGGATTAGACCCTTGTATATGTATATTTTTGAATTGGAATGCAAATCTGTGCATCTGGGCGATCAATCATATGTGGATCCAAGGTTTGAGAAGCGTGTAAAATGCCGAATCTGATAGTTTTTTTTTATATATATATATATATAACAGTGATTTATCTCTGCATAGAAATCTAACCGAATACTTTTTGAAGGCAATGTAGGTCATGCTGAGGGAGGAATACCAGAGAACCCCAACTTTTGTGAGGTAGTTTTTGTTTGCTTTTCTGTGTCTCTAGCTGTTGTTTGATATGATTGATGAATTTCGCTTTCGAAAGTAGAAATAGGAAGGAAGGAAAAGGATATTATCTCTGGGGTAGTGATGCTGAATTCTGGAACTTAAGCCTTGGGTGTCGGTGGAAGATACACTTTGACAAACTCGGCTTGGAATCTTATCCTCAATACTGTTGTCTCCATGTATGACATTTTTAGTTTTTCATTCGTTTTCTGTGTTGGAAGCAATCTTTTAAAGATTCCACCCCCATAGAATTCTCCAATTCTGACGGGTAATTATTGGAGATGGTGTGGTTTTGGGCTCAAAAAGTGGGGGAGAATGTGGGTTTATTTAGAAGGGGAGTGAGTGAGTGAGTGAGTGAATGAGAATGGGAATGGAGTGCACTTTACATGTATGATGCGCATGCTTGGCGATGCCTGATGTAGGGAGAAGAAGTGCAGGAAGTGGCACTGTGTATAATAGCGTGCCTTGTTTGGCATCTGTCTACACTTTAACTGACTGAACCCATGTGGTGGTCAGAGTCTCTGTGGCCATATGGCCCATTCCCCACCTATTCCTATTCCTTTCCCCCTCTCTCTTCTTTTTCACTTTGATTTTCGGGAAAGCACTCTCTTCCCACACCCTGTTTCCTTCCTTTTTCTACACTGCACTTGTCTGGATTATTTATTATAGACACGGTACACTTCATTGTTGTCCACTTTAAACATAAGTTCATTCTTGTCCACTTTAAACATAAGTTCACGTGACTTTGCTTTTAGTTTTCTCAAAAGATCTCATAGGGATGAGATGTATTATTTATTATAAACTTGTGATCATTCTTTTAGTTAGCCAACGTGAGACTTCGTCCCAATAATCTTCAACAATCTATCTTCTCTATTTATTGCAGGTTGGTTATTCCTCAGCGGTTTAGCTTACAATGTTTTTGGAAGTCTTCGTCGTACCTTACCTTTTGATGCTTTTTCTCCCAAACAAAGAGGGAGAATTCTTATCAGGATAAGTTCTTTTTTTTTGTTAGTGATCATTCTTGCTCAATAGGGTATAGGCCGGTTGATTGTGGCTTTAAGTAGGCTGCCACCTAACATTTGTTAGCCAAGTCATTATGAAAGCACTAGCTATATAAATTCCAAGTGGGTTTTTTGGTAGTGATAGGCTCGCTAGTGTGAGACTAGGGATTTCTACTAAGTTTAGGTGATTCTAACAGACAGACTAAAGGCATACTTGTAGGATACTGGCTCTCAGCGAGTCAAGAAGCTTGGTAA

mRNA sequence

ATGGCCGGAGGTAGCAATACCACCAGGTCGTCTCAGAAGCCTTCTTCTGCTTCCGCCGCTCCTTCCAACCGGAAATCCCGCTGGGAGTCCTCCACCAACAATCCTCCGGCCGATCCCAAATCCGACTCTAAATCTTCCAAACCCTATAATCCTTCCTCGAAATCTACAATCAGTCCCAATTCCACTCATCCTAAGCATTCTGCCGACAAGACTGTTAATCCAACTCCGGCCTCGGCTCCACTTCCGTCTCCTGGCGTTCCACTTCCCTTTCCCGACCCCTCGGCTCTTGGCCCACCACCTCCACCGTCTTATGGATTCCACATGCTTGAACGCCGCACGATTGTTCTTGCGGATGGCAGTGTACGGTCGTACTTTGCTCTCCCTCTCGACTACAAAGATTTTACTCCGCCTGCAAGGTCCATGGATCTCGCTGGTCGGTTTTTACCTATGGGGTCTGGTGGTCCTGGACCTGGTCACGAATATGGTGGATTTGATCATCGGTTTCCCCCAGGTGGCCCTATGAGCCCAGATGAGTTTAGGGGTGTTCGGGAAGAACAATTTGCGCGTGCTAGGCCTCAAGATCACTGGAATTCTCGAGGGACTAACGAGCGTGGTGGCCCTGCAGAATCGTCGTTGAAAAGGAAATTCAATGACGATAATGAGAAGGACAGGAAAGATGAGAAAGACGAATTATCCAGGCGACAGCAGCAATTTTTACACAATGGGAATGCAAATGGGTTCCTTACGGGTTTCGGCGAACGACGGGGTGATTTTTTGGCGGGAACTAGTGATCCATATGGTCTAACAGAGGATATGAGGTTCTCGAAGTACATGCGAGATGGCGGGAGTTATGTAAATGAAGGTTTGAGGCTAGGTAGCGGTAACAACGTTGCTCCTAAATATTTCGAAGTTGACCAGAATGCATTGAGAAAGGCATTTCTTCATTTTGTGAAAACTATCTACGAAAACGCTAATCAGAAGAAGAATTATTTGGAGGATGGGAAGCTCGGGCGTCTTCAATGTCTTGCTTGTGCAAGGTTTGATGCCGCCGGATTCTTTGTGCTTTCTCTCTTTGTTTTGCACTATTTCTATATAATGCTTATGAATAATGCTTCTTTCAGTGCATCCGGGTCCTCTAGAGATTTTCCAGATATGCATGGCCTTATTATGCACACATACAACTCTGATAGTGCTGACTCGCAAGTGGATCATTTGGGTTTACACAAAGCTCTTTGTGTATTAATGGGGTGGAACTACTCAAAGCCTCCTGATAATTCAAGAGGGTACCGTTTTCTATCTGCTGACGAAGCAACAGCTAACCAGGAGGATTTGATTATGTGGCCTCCTCTAGTTATCATCCACAATACAATTACTGGAAAGAGTAAAGATGGGCGCATGGAGGGTTTGGGAAACAAGGCAATGGATAGTAAAATTAGAGTGTGGGGGACAGTAGAGTCCAAGTCTTTATATGGAAGGGATGGTCATTTGGGCACAACTTTGATCAAGTTTTCAGGTGACCAGTCTGGCCTCAATGAAGCCAAGAGACTGTCTGAATTCTTTGAGAAGGACAATCATGGACGTACAGGTTGGGCTCGTGTACGACCTGCAGCATTTAGCAGGGATGATGATAAAAATCCAAACCTTGTTAAGGTGGATGAAAAGTCTGGAGAGAGGAAAAGGATTTTTTATGGCTATCTTGCAACTGCAGCTGATATGGAAAAAGTTGATTTTGATACAAGGAAAAAGGTTACCATAGAGAGCTGTAGGGATTTCAAACTGTCCAGACAGACTAAAGGCATACTTGTAGGATACTGGCTCTCAGCGAGTCAAGAAGCTTGGTAA

Coding sequence (CDS)

ATGGCCGGAGGTAGCAATACCACCAGGTCGTCTCAGAAGCCTTCTTCTGCTTCCGCCGCTCCTTCCAACCGGAAATCCCGCTGGGAGTCCTCCACCAACAATCCTCCGGCCGATCCCAAATCCGACTCTAAATCTTCCAAACCCTATAATCCTTCCTCGAAATCTACAATCAGTCCCAATTCCACTCATCCTAAGCATTCTGCCGACAAGACTGTTAATCCAACTCCGGCCTCGGCTCCACTTCCGTCTCCTGGCGTTCCACTTCCCTTTCCCGACCCCTCGGCTCTTGGCCCACCACCTCCACCGTCTTATGGATTCCACATGCTTGAACGCCGCACGATTGTTCTTGCGGATGGCAGTGTACGGTCGTACTTTGCTCTCCCTCTCGACTACAAAGATTTTACTCCGCCTGCAAGGTCCATGGATCTCGCTGGTCGGTTTTTACCTATGGGGTCTGGTGGTCCTGGACCTGGTCACGAATATGGTGGATTTGATCATCGGTTTCCCCCAGGTGGCCCTATGAGCCCAGATGAGTTTAGGGGTGTTCGGGAAGAACAATTTGCGCGTGCTAGGCCTCAAGATCACTGGAATTCTCGAGGGACTAACGAGCGTGGTGGCCCTGCAGAATCGTCGTTGAAAAGGAAATTCAATGACGATAATGAGAAGGACAGGAAAGATGAGAAAGACGAATTATCCAGGCGACAGCAGCAATTTTTACACAATGGGAATGCAAATGGGTTCCTTACGGGTTTCGGCGAACGACGGGGTGATTTTTTGGCGGGAACTAGTGATCCATATGGTCTAACAGAGGATATGAGGTTCTCGAAGTACATGCGAGATGGCGGGAGTTATGTAAATGAAGGTTTGAGGCTAGGTAGCGGTAACAACGTTGCTCCTAAATATTTCGAAGTTGACCAGAATGCATTGAGAAAGGCATTTCTTCATTTTGTGAAAACTATCTACGAAAACGCTAATCAGAAGAAGAATTATTTGGAGGATGGGAAGCTCGGGCGTCTTCAATGTCTTGCTTGTGCAAGGTTTGATGCCGCCGGATTCTTTGTGCTTTCTCTCTTTGTTTTGCACTATTTCTATATAATGCTTATGAATAATGCTTCTTTCAGTGCATCCGGGTCCTCTAGAGATTTTCCAGATATGCATGGCCTTATTATGCACACATACAACTCTGATAGTGCTGACTCGCAAGTGGATCATTTGGGTTTACACAAAGCTCTTTGTGTATTAATGGGGTGGAACTACTCAAAGCCTCCTGATAATTCAAGAGGGTACCGTTTTCTATCTGCTGACGAAGCAACAGCTAACCAGGAGGATTTGATTATGTGGCCTCCTCTAGTTATCATCCACAATACAATTACTGGAAAGAGTAAAGATGGGCGCATGGAGGGTTTGGGAAACAAGGCAATGGATAGTAAAATTAGAGTGTGGGGGACAGTAGAGTCCAAGTCTTTATATGGAAGGGATGGTCATTTGGGCACAACTTTGATCAAGTTTTCAGGTGACCAGTCTGGCCTCAATGAAGCCAAGAGACTGTCTGAATTCTTTGAGAAGGACAATCATGGACGTACAGGTTGGGCTCGTGTACGACCTGCAGCATTTAGCAGGGATGATGATAAAAATCCAAACCTTGTTAAGGTGGATGAAAAGTCTGGAGAGAGGAAAAGGATTTTTTATGGCTATCTTGCAACTGCAGCTGATATGGAAAAAGTTGATTTTGATACAAGGAAAAAGGTTACCATAGAGAGCTGTAGGGATTTCAAACTGTCCAGACAGACTAAAGGCATACTTGTAGGATACTGGCTCTCAGCGAGTCAAGAAGCTTGGTAA

Protein sequence

MAGGSNTTRSSQKPSSASAAPSNRKSRWESSTNNPPADPKSDSKSSKPYNPSSKSTISPNSTHPKHSADKTVNPTPASAPLPSPGVPLPFPDPSALGPPPPPSYGFHMLERRTIVLADGSVRSYFALPLDYKDFTPPARSMDLAGRFLPMGSGGPGPGHEYGGFDHRFPPGGPMSPDEFRGVREEQFARARPQDHWNSRGTNERGGPAESSLKRKFNDDNEKDRKDEKDELSRRQQQFLHNGNANGFLTGFGERRGDFLAGTSDPYGLTEDMRFSKYMRDGGSYVNEGLRLGSGNNVAPKYFEVDQNALRKAFLHFVKTIYENANQKKNYLEDGKLGRLQCLACARFDAAGFFVLSLFVLHYFYIMLMNNASFSASGSSRDFPDMHGLIMHTYNSDSADSQVDHLGLHKALCVLMGWNYSKPPDNSRGYRFLSADEATANQEDLIMWPPLVIIHNTITGKSKDGRMEGLGNKAMDSKIRVWGTVESKSLYGRDGHLGTTLIKFSGDQSGLNEAKRLSEFFEKDNHGRTGWARVRPAAFSRDDDKNPNLVKVDEKSGERKRIFYGYLATAADMEKVDFDTRKKVTIESCRDFKLSRQTKGILVGYWLSASQEAW

Homology

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BLAST of CmoCh17G002200 vs. ExPASy Swiss-Prot
Match: A5YVF1 (Protein SUPPRESSOR OF GENE SILENCING 3 OS=Solanum lycopersicum OX=4081 GN=SGS3 PE=1 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 1.5e-11
Identity = 42/129 (32.56%), Postives = 62/129 (48.06%), Query Frame = 0


Query: 445 IMWPPLVIIHNTITGKSKDGRMEGLGNKAMDSKIRVWGTVESKSLYGRDGHLGTTLIKFS 504
           I+WPP+VII NT   K ++ +  G+GN+ +      +  V+++  YG  GH G +L+ F 
Sbjct: 304 IVWPPMVIIMNTRLDKDENDKWIGMGNQELLEYFSSYAAVKARHSYGPQGHRGMSLLIFE 363

Query: 505 GDQSGLNEAKRLSEFFEKDNHGRTGWARVRPAAFSRDDDKNPNLVKVDEKSGERKRIFYG 564
               G  EA RLSE F ++   R  W R R A F                    KR+ YG
Sbjct: 364 ASAVGYIEADRLSEHFSENGRNRDAWER-RSARFYPGG----------------KRLLYG 415

Query: 565 YLATAADME 574
           Y+A   D++
Sbjct: 424 YMADKKDID 415

[Close]

BLAST of CmoCh17G002200 vs. ExPASy Swiss-Prot
Match: A1Y2B7 (Protein SUPPRESSOR OF GENE SILENCING 3 homolog OS=Zea mays OX=4577 GN=SGS3 PE=1 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 3.4e-11
Identity = 51/174 (29.31%), Postives = 75/174 (43.10%), Query Frame = 0


Query: 407 LHKALCVLMGWNYSKPPDNSRGYRFLSADEATANQEDL-------IMWPPLVIIHNTITG 466
           LH+ L  L+    S+     RG   L A E     + L       I+WPP+VI+ NT   
Sbjct: 229 LHRELAALLEEELSR-----RGTSVLPAGEQFGKWKGLQESTDREIVWPPMVIVMNTFLE 288

Query: 467 KSKDGRMEGLGNKAMDSKIRVWGTVESKSLYGRDGHLGTTLIKFSGDQSGLNEAKRLSEF 526
           K +D + +G+GN+ +      +   +++  YG  GH G +++ F     G  EA+RL + 
Sbjct: 289 KDEDDKWKGMGNQELLDYFGEYEASKARHAYGPSGHRGMSVLIFESSAVGYMEAERLHKH 348

Query: 527 FEKDNHGRTGWARVRPAAFSRDDDKNPNLVKVDEKSGERKRIFYGYLATAADME 574
           F      R  W                +L KV    G  KR  YG+LA   DME
Sbjct: 349 FVNQGTDRNSW----------------HLRKVRFVPG-GKRQLYGFLANKEDME 380

[Close]

BLAST of CmoCh17G002200 vs. ExPASy Swiss-Prot
Match: A2ZIW7 (Protein SUPPRESSOR OF GENE SILENCING 3 homolog OS=Oryza sativa subsp. indica OX=39946 GN=SGS3 PE=3 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 9.9e-11
Identity = 36/129 (27.91%), Postives = 60/129 (46.51%), Query Frame = 0


Query: 445 IMWPPLVIIHNTITGKSKDGRMEGLGNKAMDSKIRVWGTVESKSLYGRDGHLGTTLIKFS 504
           I+WPP+V++ NT+  + +D + +G+GN+ +      +   +++  YG +GH G +++ F 
Sbjct: 280 IVWPPMVVVMNTVLEQDEDDKWKGMGNQELIDYFSEYAASKARHAYGPNGHRGMSVLIFD 339

Query: 505 GDQSGLNEAKRLSEFFEKDNHGRTGWARVRPAAFSRDDDKNPNLVKVDEKSGERKRIFYG 564
               G  EA+RL + F +    R  W       F                    KR  YG
Sbjct: 340 SSAVGYMEAERLHDHFVRQRTDRNTWNSAHKVTFLPGG----------------KRQLYG 392

Query: 565 YLATAADME 574
           +LAT  DME
Sbjct: 400 FLATKDDME 392

[Close]

BLAST of CmoCh17G002200 vs. ExPASy Swiss-Prot
Match: Q2QWE9 (Protein SUPPRESSOR OF GENE SILENCING 3 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=SGS3 PE=3 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 9.9e-11
Identity = 36/129 (27.91%), Postives = 60/129 (46.51%), Query Frame = 0


Query: 445 IMWPPLVIIHNTITGKSKDGRMEGLGNKAMDSKIRVWGTVESKSLYGRDGHLGTTLIKFS 504
           I+WPP+V++ NT+  + +D + +G+GN+ +      +   +++  YG +GH G +++ F 
Sbjct: 280 IVWPPMVVVMNTVLEQDEDDKWKGMGNQELIDYFSEYAASKARHAYGPNGHRGMSVLIFD 339

Query: 505 GDQSGLNEAKRLSEFFEKDNHGRTGWARVRPAAFSRDDDKNPNLVKVDEKSGERKRIFYG 564
               G  EA+RL + F +    R  W       F                    KR  YG
Sbjct: 340 SSAVGYMEAERLHDHFVRQRTDRNTWNSAHKVTFLPGG----------------KRQLYG 392

Query: 565 YLATAADME 574
           +LAT  DME
Sbjct: 400 FLATKDDME 392

[Close]

BLAST of CmoCh17G002200 vs. ExPASy Swiss-Prot
Match: Q9LDX1 (Protein SUPPRESSOR OF GENE SILENCING 3 OS=Arabidopsis thaliana OX=3702 GN=SGS3 PE=1 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 2.3e-07
Identity = 37/129 (28.68%), Postives = 60/129 (46.51%), Query Frame = 0


Query: 445 IMWPPLVIIHNTITGKSKDGRMEGLGNKAMDSKIRVWGTVESKSLYGRDGHLGTTLIKFS 504
           I+WPP+VII NT   K  + +  G+GN+ +      +  + ++  YG  GH G +++ F 
Sbjct: 301 IVWPPMVIIMNTRLDKDDNDKWLGMGNQELLEYFDKYEALRARHSYGPQGHRGMSVLMFE 360

Query: 505 GDQSGLNEAKRLSEFFEKDNHGRTGWARVRPAAFSRDDDKNPNLVKVDEKSGERKRIFYG 564
              +G  EA+RL     +    R  W + R + FS                G R+   YG
Sbjct: 361 SSATGYLEAERLHRELAEMGLDRIAWGQKR-SMFS---------------GGVRQ--LYG 411

Query: 565 YLATAADME 574
           +LAT  D++
Sbjct: 421 FLATKQDLD 411

[Close]

BLAST of CmoCh17G002200 vs. ExPASy TrEMBL
Match: A0A6J1L434 (uncharacterized protein LOC111498966 OS=Cucurbita maxima OX=3661 GN=LOC111498966 PE=4 SV=1)

HSP 1 Score: 1058.5 bits (2736), Expect = 1.0e-305
Identity = 543/597 (90.95%), Postives = 550/597 (92.13%), Query Frame = 0


Query: 1   MAGGSNTTRSSQKPSSASAAPSNRKSRWESSTNNPPADPKSDSKSSKPYNPSSKSTISPN 60
           MAGGSNTTRSSQKPSSASAAPSNRKSRWESSTNNPP    SDSKSSKPYNPSSKSTISP+
Sbjct: 1   MAGGSNTTRSSQKPSSASAAPSNRKSRWESSTNNPP----SDSKSSKPYNPSSKSTISPS 60

Query: 61  STHPKHSADKTVNPTPASAPLPSPGVPLPFPDPSALGPPPPPSYGFHMLERRTIVLADGS 120
           STHPKHSADKTVNPTPASAPLPSPG+PLPFPDPSALGPPPPPSYGFHMLERRTIVLADGS
Sbjct: 61  STHPKHSADKTVNPTPASAPLPSPGIPLPFPDPSALGPPPPPSYGFHMLERRTIVLADGS 120

Query: 121 VRSYFALPLDYKDFTPPARSMDLAGRFLPMGSGGPGPGHEYGGFDHRFPPGGPMSPDEFR 180
           VRSYFALPLDYKDFTPPAR MDLAGRFLPMGSG  GPGHEYGGFDHRFPPGGPMSPDEFR
Sbjct: 121 VRSYFALPLDYKDFTPPARFMDLAGRFLPMGSG--GPGHEYGGFDHRFPPGGPMSPDEFR 180

Query: 181 GVREEQFARARPQDHWNSRGTNERGGPAESSLKRKFNDDNEKDRKDEKDELSRRQQQFLH 240
           GV+EEQFARARPQDHWNSRGTNERGGPAESSLKRKFNDDNEKDR DEKDELSRRQQQFLH
Sbjct: 181 GVQEEQFARARPQDHWNSRGTNERGGPAESSLKRKFNDDNEKDRTDEKDELSRRQQQFLH 240

Query: 241 NGNANGFLTGFGERRGDFLAGTSDPYGLTEDMRFSKYMRDGGSYVNEGLRLGSGNNVAPK 300
           NGNANGFLTGFGERRGDFLAGTSDPYG TEDMRFSKYMRDGGSYVNEGLRLGSGNNVAPK
Sbjct: 241 NGNANGFLTGFGERRGDFLAGTSDPYGRTEDMRFSKYMRDGGSYVNEGLRLGSGNNVAPK 300

Query: 301 YFEVDQNALRKAFLHFVKTIYENANQKKNYLEDGKLGRLQCLACARFDAAGFFVLSLFVL 360
           YFEVDQNALRKAFLHFVKTIYENA QKKNYLEDGKLGRLQCLACAR              
Sbjct: 301 YFEVDQNALRKAFLHFVKTIYENAIQKKNYLEDGKLGRLQCLACAR-------------- 360

Query: 361 HYFYIMLMNNASFSASGSSRDFPDMHGLIMHTYNSDSADSQVDHLGLHKALCVLMGWNYS 420
                            SSRDFPDMHGLIMHTYNSDSADSQVDHLGLHKALCVLMGWNYS
Sbjct: 361 -----------------SSRDFPDMHGLIMHTYNSDSADSQVDHLGLHKALCVLMGWNYS 420

Query: 421 KPPDNSRGYRFLSADEATANQEDLIMWPPLVIIHNTITGKSKDGRMEGLGNKAMDSKIR- 480
           KPPDNSRGYRFLSADEATANQEDLIMWPPLVIIHNTITGKSKDGRMEGLGNKAMDSKIR 
Sbjct: 421 KPPDNSRGYRFLSADEATANQEDLIMWPPLVIIHNTITGKSKDGRMEGLGNKAMDSKIRD 480

Query: 481 -VWGTVESKSLYGRDGHLGTTLIKFSGDQSGLNEAKRLSEFFEKDNHGRTGWARVRPAAF 540
             +G  +SKSLYGRDGHLGTTLIKFSGDQSGLNEAK+L+EFFEKDNHGRTGWA VRPAAF
Sbjct: 481 LGFGGGKSKSLYGRDGHLGTTLIKFSGDQSGLNEAKKLAEFFEKDNHGRTGWAHVRPAAF 540

Query: 541 SRDDDKNPNLVKVDEKSGERKRIFYGYLATAADMEKVDFDTRKKVTIESCRDFKLSR 596
           SRDDDKNPNLVKVDEKSGERKRIFYGYLATAADMEKVDFDTRKKVTIESCRDFKLSR
Sbjct: 541 SRDDDKNPNLVKVDEKSGERKRIFYGYLATAADMEKVDFDTRKKVTIESCRDFKLSR 560

[Close]

BLAST of CmoCh17G002200 vs. ExPASy TrEMBL
Match: A0A1S3BHM0 (uncharacterized protein LOC103489668 OS=Cucumis melo OX=3656 GN=LOC103489668 PE=4 SV=1)

HSP 1 Score: 983.8 bits (2542), Expect = 3.3e-283
Identity = 508/597 (85.09%), Postives = 529/597 (88.61%), Query Frame = 0


Query: 1   MAGGSNTTRSSQKPSSASAAPSNRKSRWESSTNNPPADPKSDSKSSKPYNPSSKSTISPN 60
           MAGGSNT +SSQKPSS SAAPS+RKSRWESS+NNPP+DPKSDSKSSKP++PSSKS ISPN
Sbjct: 1   MAGGSNTNKSSQKPSS-SAAPSHRKSRWESSSNNPPSDPKSDSKSSKPHHPSSKSGISPN 60

Query: 61  STHPKHSADKTVNPTPASAPLPSPGVPLPFPDPSALGPPPPPSYGFHMLERRTIVLADGS 120
           STHP     K +NPTPASAPLPSPGVPLPFPDPSALGPPPPPSYGFHMLERRTIVLADGS
Sbjct: 61  STHP-----KPLNPTPASAPLPSPGVPLPFPDPSALGPPPPPSYGFHMLERRTIVLADGS 120

Query: 121 VRSYFALPLDYKDFTPPARSMDLAGRFLPMGSGGPGPGHEYGGFDHRFPPGGPMSPDEFR 180
           VRSYFALPLDY +FTPPARSMDLA RFLPMGS   G GHEYGGFDHRFPPGGPMSPDE R
Sbjct: 121 VRSYFALPLDYHEFTPPARSMDLAARFLPMGSA--GSGHEYGGFDHRFPPGGPMSPDELR 180

Query: 181 GVREEQFARARPQDHWNSRGTNERGGPAESSLKRKFNDDNEKDRKDEKDELSRRQQQFLH 240
           G REEQF RARPQDHWNSRGT+ERGGPA+SS+KRKFNDDNEKDRKDEKD+ SRRQQQ LH
Sbjct: 181 GAREEQFGRARPQDHWNSRGTDERGGPADSSMKRKFNDDNEKDRKDEKDDFSRRQQQLLH 240

Query: 241 NGNANGFLTGFGERRGDFLAGTSDPYGLTEDMRFSKYMRDGGSYVNEGLRLGSGNNVAPK 300
           NGNANGFLTG GERRGDFLAGTSDPYG TED RFSKYMR GGSY NEGLRLGSG NVAPK
Sbjct: 241 NGNANGFLTGSGERRGDFLAGTSDPYGRTEDTRFSKYMRVGGSYENEGLRLGSGKNVAPK 300

Query: 301 YFEVDQNALRKAFLHFVKTIYENANQKKNYLEDGKLGRLQCLACARFDAAGFFVLSLFVL 360
           Y EVDQ+ALRKAFLHFVKTI ENANQKKNYLEDGK GRLQCLACAR              
Sbjct: 301 YLEVDQSALRKAFLHFVKTINENANQKKNYLEDGKHGRLQCLACAR-------------- 360

Query: 361 HYFYIMLMNNASFSASGSSRDFPDMHGLIMHTYNSDSADSQVDHLGLHKALCVLMGWNYS 420
                            SSRDFPDMHGLIMHTYNS+SADSQVDHLGLHKALCVLMGWNYS
Sbjct: 361 -----------------SSRDFPDMHGLIMHTYNSESADSQVDHLGLHKALCVLMGWNYS 420

Query: 421 KPPDNSRGYRFLSADEATANQEDLIMWPPLVIIHNTITGKSKDGRMEGLGNKAMDSKIR- 480
           KPPDNSRGYRFLSADEA ANQEDLIMWPPLVIIHNTITGKSKDGRMEGLGNKAMDSKIR 
Sbjct: 421 KPPDNSRGYRFLSADEAAANQEDLIMWPPLVIIHNTITGKSKDGRMEGLGNKAMDSKIRD 480

Query: 481 -VWGTVESKSLYGRDGHLGTTLIKFSGDQSGLNEAKRLSEFFEKDNHGRTGWARVRPAAF 540
             +G  +SKSLYGRDGHLGTTLIKFSGDQSGLNEAKRL+EFFEKDNHGR+ WARVRPAA+
Sbjct: 481 LGFGGGKSKSLYGRDGHLGTTLIKFSGDQSGLNEAKRLAEFFEKDNHGRSAWARVRPAAY 540

Query: 541 SRDDDKNPNLVKVDEKSGERKRIFYGYLATAADMEKVDFDTRKKVTIESCRDFKLSR 596
           SRDDDKNPNLVKVDEKSGE+KRIFYGYLATAADM+KVDFDTRKKVTIESCRDFK SR
Sbjct: 541 SRDDDKNPNLVKVDEKSGEKKRIFYGYLATAADMDKVDFDTRKKVTIESCRDFKSSR 558

[Close]

BLAST of CmoCh17G002200 vs. ExPASy TrEMBL
Match: A0A6J1EWJ6 (uncharacterized protein LOC111436786 OS=Cucurbita moschata OX=3662 GN=LOC111436786 PE=4 SV=1)

HSP 1 Score: 946.4 bits (2445), Expect = 5.8e-272
Identity = 486/597 (81.41%), Postives = 513/597 (85.93%), Query Frame = 0


Query: 1   MAGGSNTTRSSQKPSSASAAPSNRKSRWESSTNNPPADPKSDSKSSKPYNPSSKSTISPN 60
           MAGG+NT++ SQKP S+S APSNRKSRWESSTNNPP+DPKSDSKSSKP+NPSSK  ISPN
Sbjct: 1   MAGGNNTSQPSQKPPSSSTAPSNRKSRWESSTNNPPSDPKSDSKSSKPHNPSSKVAISPN 60

Query: 61  STHPKHSADKTVNPTPASAPLPSPGVPLPFPDPSALGPPPPPSYGFHMLERRTIVLADGS 120
           STHPKH ADK  NPTPASAPL SPGV LPF DPS LGPPPPPSYGFHML+RRTIVLADGS
Sbjct: 61  STHPKHPADKAANPTPASAPLHSPGVLLPFSDPSDLGPPPPPSYGFHMLDRRTIVLADGS 120

Query: 121 VRSYFALPLDYKDFTPPARSMDLAGRFLPMGSGGPGPGHEYGGFDHRFPPGGPMSPDEFR 180
           VRSYFALPLDY+DFTPPAR MDLA RFLPMGSG  GPG EYGGFD RFPPGGPMSP+EFR
Sbjct: 121 VRSYFALPLDYQDFTPPARPMDLAARFLPMGSG--GPGREYGGFDRRFPPGGPMSPNEFR 180

Query: 181 GVREEQFARARPQDHWNSRGTNERGGPAESSLKRKFNDDNEKDRKDEKDELSRRQQQFLH 240
           GVREEQFAR+RPQDHWNSRGT+ERGGPAE S+KRKFNDDNEKDRKDEKDE+SRRQQQFLH
Sbjct: 181 GVREEQFARSRPQDHWNSRGTDERGGPAEFSMKRKFNDDNEKDRKDEKDEMSRRQQQFLH 240

Query: 241 NGNANGFLTGFGERRGDFLAGTSDPYGLTEDMRFSKYMRDGGSYVNEGLRLGSGNNVAPK 300
           N NANGF TG GERRGDFL GTSDPYG TED+RFSKYMR GGSY NEGLR GSG+NVAPK
Sbjct: 241 NENANGFHTGSGERRGDFLVGTSDPYGRTEDIRFSKYMRVGGSYENEGLRPGSGHNVAPK 300

Query: 301 YFEVDQNALRKAFLHFVKTIYENANQKKNYLEDGKLGRLQCLACARFDAAGFFVLSLFVL 360
           Y E+DQNALRKAFLHFVKTI ENA QKKNYLEDGK GRLQCLAC+R              
Sbjct: 301 YLEIDQNALRKAFLHFVKTINENATQKKNYLEDGKHGRLQCLACSR-------------- 360

Query: 361 HYFYIMLMNNASFSASGSSRDFPDMHGLIMHTYNSDSADSQVDHLGLHKALCVLMGWNYS 420
                            SSRDFPDMHGLIMHTYN DSAD  VDHLGLHKALCVLMGWNYS
Sbjct: 361 -----------------SSRDFPDMHGLIMHTYNCDSADLLVDHLGLHKALCVLMGWNYS 420

Query: 421 KPPDNSRGYRFLSADEATANQEDLIMWPPLVIIHNTITGKSKDGRMEGLGNKAMDSKIRV 480
           KPPD+SRGYR+LSADEA ANQEDLIMWPPLVIIHNTI GK KDGRMEGLGNKAMDSKIR 
Sbjct: 421 KPPDSSRGYRYLSADEAAANQEDLIMWPPLVIIHNTIIGKGKDGRMEGLGNKAMDSKIRE 480

Query: 481 --WGTVESKSLYGRDGHLGTTLIKFSGDQSGLNEAKRLSEFFEKDNHGRTGWARVRPAAF 540
             +G  +SKSLYGR+GHLGTTLIKFSG+QSGLNEAKRL+EFFEKDNHGR  WA +RPAA 
Sbjct: 481 LGFGGGKSKSLYGREGHLGTTLIKFSGEQSGLNEAKRLAEFFEKDNHGRKAWACIRPAAL 540

Query: 541 SRDDDKNPNLVKVDEKSGERKRIFYGYLATAADMEKVDFDTRKKVTIESCRDFKLSR 596
             DDDKNPNLVKVDEK+GER RIFYGYLATAADM+KVDFDTRKKV IES RD K SR
Sbjct: 541 GNDDDKNPNLVKVDEKTGERNRIFYGYLATAADMDKVDFDTRKKVAIESYRDIKSSR 564

[Close]

BLAST of CmoCh17G002200 vs. ExPASy TrEMBL
Match: A0A6J1CA20 (uncharacterized protein LOC111009586 OS=Momordica charantia OX=3673 GN=LOC111009586 PE=4 SV=1)

HSP 1 Score: 940.3 bits (2429), Expect = 4.2e-270
Identity = 484/598 (80.94%), Postives = 513/598 (85.79%), Query Frame = 0


Query: 1   MAGGSNTTRSSQKPSSASAAPSNRKSRWES-STNNPPADPKSDSKSSKPYNPSSKSTISP 60
           MAGG+NTT+ SQKPSS+SAAPSNRKSRWES S NNPP+DPKSDS++SKP+ PS K+ ISP
Sbjct: 1   MAGGNNTTKPSQKPSSSSAAPSNRKSRWESTSNNNPPSDPKSDSRTSKPHKPSPKTAISP 60

Query: 61  NSTHPKHSADKTVNPTPASAPLPSPGVPLPFPDPSALGPPPPPSYGFHMLERRTIVLADG 120
            STHP H  DK VNPTPASAP+PSP    PFPDPSALGP PPPSYGFHMLERRTIVLADG
Sbjct: 61  GSTHPMHPTDKGVNPTPASAPIPSP----PFPDPSALGPLPPPSYGFHMLERRTIVLADG 120

Query: 121 SVRSYFALPLDYKDFTPPARSMDLAGRFLPMGSGGPGPGHEYGGFDHRFPPGGPMSPDEF 180
           SVRSYFALPLDY+DFTPPAR MDLAGRFLPMGSG  GPG EYGGFDHRFPPGGPMSPDEF
Sbjct: 121 SVRSYFALPLDYQDFTPPARPMDLAGRFLPMGSG--GPGREYGGFDHRFPPGGPMSPDEF 180

Query: 181 RGVREEQFARARPQDHWNSRGTNERGGPAESSLKRKFNDDNEKDRKDEKDELSRRQQQFL 240
           RG REEQFARARPQDHWNSRG +ERGG AE S+KRKFNDDNEKDRKD+KDELSRRQQQFL
Sbjct: 181 RGNREEQFARARPQDHWNSRGADERGGAAEFSMKRKFNDDNEKDRKDDKDELSRRQQQFL 240

Query: 241 HNGNANGFLTGFGERRGDFLAGTSDPYGLTEDMRFSKYMRDGGSYVNEGLRLGSGNNVAP 300
           HNGNANGF +G GERRGDFL GTSDPY  TEDMRFSKYMR GG Y NEGLRLGSG+NVAP
Sbjct: 241 HNGNANGFFSGPGERRGDFLVGTSDPYSRTEDMRFSKYMRVGGGYENEGLRLGSGDNVAP 300

Query: 301 KYFEVDQNALRKAFLHFVKTIYENANQKKNYLEDGKLGRLQCLACARFDAAGFFVLSLFV 360
           KY EVDQNAL+KAF+HFVKTI ENANQ+KNYL +GK GRLQCLACAR             
Sbjct: 301 KYLEVDQNALKKAFVHFVKTINENANQRKNYLGNGKHGRLQCLACAR------------- 360

Query: 361 LHYFYIMLMNNASFSASGSSRDFPDMHGLIMHTYNSDSADSQVDHLGLHKALCVLMGWNY 420
                             SSR+FPDMHGL+MHTYNSDSADSQVDHLGLHKALCVLMGWNY
Sbjct: 361 ------------------SSREFPDMHGLVMHTYNSDSADSQVDHLGLHKALCVLMGWNY 420

Query: 421 SKPPDNSRGYRFLSADEATANQEDLIMWPPLVIIHNTITGKSKDGRMEGLGNKAMDSKIR 480
           SK PDNSRGY+FLSADEA ANQ+DLIMWPPLVIIHNTITGK KDGRMEGLGNKAMDSKIR
Sbjct: 421 SKSPDNSRGYQFLSADEAAANQDDLIMWPPLVIIHNTITGKGKDGRMEGLGNKAMDSKIR 480

Query: 481 --VWGTVESKSLYGRDGHLGTTLIKFSGDQSGLNEAKRLSEFFEKDNHGRTGWARVRPAA 540
              +G  +SKSLYGRDGHLGTTLIKFSGDQSGLNEAKRL+EFFEK  HGR  WA VRPA 
Sbjct: 481 DLGFGGGKSKSLYGRDGHLGTTLIKFSGDQSGLNEAKRLAEFFEKGGHGRMAWAHVRPAV 540

Query: 541 FSRDDDKNPNLVKVDEKSGERKRIFYGYLATAADMEKVDFDTRKKVTIESCRDFKLSR 596
           FS DDDKNPNLVK DEK+GE+KRIFYGYLATAADM+KVDFDTRKKV IESCRDFK SR
Sbjct: 541 FSMDDDKNPNLVKTDEKTGEKKRIFYGYLATAADMDKVDFDTRKKVAIESCRDFKSSR 561

[Close]

BLAST of CmoCh17G002200 vs. ExPASy TrEMBL
Match: A0A6J1H4N8 (uncharacterized protein LOC111460445 OS=Cucurbita moschata OX=3662 GN=LOC111460445 PE=4 SV=1)

HSP 1 Score: 882.9 bits (2280), Expect = 7.9e-253
Identity = 448/479 (93.53%), Postives = 448/479 (93.53%), Query Frame = 0


Query: 1   MAGGSNTTRSSQKPSSASAAPSNRKSRWESSTNNPPADPKSDSKSSKPYNPSSKSTISPN 60
           MAGGSNTTRSSQKPSSASAAPSNRKSRWESSTNNPPADPKSDSKSSKPYNPSSKSTISPN
Sbjct: 1   MAGGSNTTRSSQKPSSASAAPSNRKSRWESSTNNPPADPKSDSKSSKPYNPSSKSTISPN 60

Query: 61  STHPKHSADKTVNPTPASAPLPSPGVPLPFPDPSALGPPPPPSYGFHMLERRTIVLADGS 120
           STHPKHSADKTVNPTPASAPLPSPGVPLPFPDPSALGPPPPPSYGFHMLERRTIVLADGS
Sbjct: 61  STHPKHSADKTVNPTPASAPLPSPGVPLPFPDPSALGPPPPPSYGFHMLERRTIVLADGS 120

Query: 121 VRSYFALPLDYKDFTPPARSMDLAGRFLPMGSGGPGPGHEYGGFDHRFPPGGPMSPDEFR 180
           VRSYFALPLDYKDFTPPARSMDLAGRFLPMGSGGPGPGHEYGGFDHRFPPGGPMSPDEFR
Sbjct: 121 VRSYFALPLDYKDFTPPARSMDLAGRFLPMGSGGPGPGHEYGGFDHRFPPGGPMSPDEFR 180

Query: 181 GVREEQFARARPQDHWNSRGTNERGGPAESSLKRKFNDDNEKDRKDEKDELSRRQQQFLH 240
           GVREEQFARARPQDHWNSRGTNERGGPAESSLKRKFNDDNEKDRKDEKDELSRRQQQFLH
Sbjct: 181 GVREEQFARARPQDHWNSRGTNERGGPAESSLKRKFNDDNEKDRKDEKDELSRRQQQFLH 240

Query: 241 NGNANGFLTGFGERRGDFLAGTSDPYGLTEDMRFSKYMRDGGSYVNEGLRLGSGNNVAPK 300
           NGNANGFLTGFGERRGDFLAGTSDPYGLTEDMRFSKYMRDGGSYVNEGLRLGSGNNVAPK
Sbjct: 241 NGNANGFLTGFGERRGDFLAGTSDPYGLTEDMRFSKYMRDGGSYVNEGLRLGSGNNVAPK 300

Query: 301 YFEVDQNALRKAFLHFVKTIYENANQKKNYLEDGKLGRLQCLACARFDAAGFFVLSLFVL 360
           YFEVDQNALRKAFLHFVKTIYENANQKKNYLEDGKLGRLQCLACAR              
Sbjct: 301 YFEVDQNALRKAFLHFVKTIYENANQKKNYLEDGKLGRLQCLACAR-------------- 360

Query: 361 HYFYIMLMNNASFSASGSSRDFPDMHGLIMHTYNSDSADSQVDHLGLHKALCVLMGWNYS 420
                            SSRDFPDMHGLIMHTYNSDSADSQVDHLGLHKALCVLMGWNYS
Sbjct: 361 -----------------SSRDFPDMHGLIMHTYNSDSADSQVDHLGLHKALCVLMGWNYS 420

Query: 421 KPPDNSRGYRFLSADEATANQEDLIMWPPLVIIHNTITGKSKDGRMEGLGNKAMDSKIR 480
           KPPDNSRGYRFLSADEATANQEDLIMWPPLVIIHNTITGKSKDGRMEGLGNKAMDSKIR
Sbjct: 421 KPPDNSRGYRFLSADEATANQEDLIMWPPLVIIHNTITGKSKDGRMEGLGNKAMDSKIR 448

[Close]

BLAST of CmoCh17G002200 vs. TAIR 10
Match: AT3G22430.1 (CONTAINS InterPro DOMAIN/s: Domain of unknown function XS (InterPro:IPR005380); BEST Arabidopsis thaliana protein match is: XS domain-containing protein / XS zinc finger domain-containing protein-related (TAIR:AT5G23570.1); Has 565 Blast hits to 510 proteins in 121 species: Archae - 2; Bacteria - 90; Metazoa - 191; Fungi - 32; Plants - 51; Viruses - 4; Other Eukaryotes - 195 (source: NCBI BLink). )

HSP 1 Score: 427.2 bits (1097), Expect = 2.3e-119
Identity = 274/610 (44.92%), Postives = 348/610 (57.05%), Query Frame = 0


Query: 1   MAGGSNTTRSSQK-------PSSASAAPSNRKSRWESSTNNP--PADPKSDSKSSKP--- 60
           M G +N  +SS         P++A+++  N K R  S+ N+     +  ++ K SKP   
Sbjct: 1   MVGSNNNAKSSTNKPPATSIPTAAASSSQNHKPRVNSTNNDGGISNNNNNNKKESKPMMI 60

Query: 61  --YNPSSKSTISPNSTHPKHSADKTVNPTPASAPLPS---PGVPLPFPDPS-ALGPPPPP 120
                + K  + PN +       K  NP   +   PS   P  P PFPD S ALGPPP P
Sbjct: 61  GVQKTADKKPLKPNPSPKLAPIPKQSNPNHQNQTGPSSSRPMAPFPFPDSSPALGPPPQP 120

Query: 121 SYGFHMLERRTIVLADGSVRSYFALPLDYKDFTPPARSMDLAGRFLPMGSGGPGPGHEYG 180
           +YGFHMLERRTIVLADGSVRSYFALP +Y DF P +R              GP  G    
Sbjct: 121 TYGFHMLERRTIVLADGSVRSYFALPPNYMDFPPQSR------------LAGPVFG---- 180

Query: 181 GFDHRFPPGGPMSPDEFRGVREEQFARARPQDHWNSRGTNERGGPAESSLKRKFNDDNEK 240
               RFP   P  P+EFR  R                            +KRK+  + E 
Sbjct: 181 ----RFP---PFYPEEFRDQR----------------------------MKRKYPGEEEI 240

Query: 241 DRKDEKDELSRRQQQFLHNGNANGFLTGFGERRGDFLAGTSDPYGLTEDMRFSKYMRDGG 300
           DR+DE+ E+ R++QQF+   N N            F+AGTS   G  ED+R +K+MR G 
Sbjct: 241 DRRDERAEMMRQRQQFMQYANPNDH---------SFMAGTSRDVG--EDVRAAKHMRVGS 300

Query: 301 SYVNEGLRLGSGNNVAPKYFEVDQNALRKAFLHFVKTIYENANQKKNYLEDGKLGRLQCL 360
           S  + G             F+VDQ AL+K+FL FVK ++E+  +KKNYLE+G+ GRLQCL
Sbjct: 301 SRHDNG------------GFQVDQVALKKSFLGFVKRVFEDPMEKKNYLENGRKGRLQCL 360

Query: 361 ACARFDAAGFFVLSLFVLHYFYIMLMNNASFSASGSSRDFPDMHGLIMHTYNSDSADSQV 420
            C R                               SS+D  D H L+MHTY SD + S+V
Sbjct: 361 VCGR-------------------------------SSKDVQDTHSLVMHTYCSDDSSSRV 420

Query: 421 DHLGLHKALCVLMGWNYSKPPDNSRGYRFLSADEATANQEDLIMWPPLVIIHNTITGKSK 480
            HLGLHKALCVLMGWN+SK PDNS+ Y+ L ADEA  NQ  LI+WPP VI+ NT TGK K
Sbjct: 421 HHLGLHKALCVLMGWNFSKAPDNSKAYQNLPADEAAINQAQLIIWPPHVIVQNTSTGKGK 480

Query: 481 DGRMEGLGNKAMDSKIRVWGTV--ESKSLYGRDGHLGTTLIKFSGDQSGLNEAKRLSEFF 540
           +GRMEG GNK MD++IR  G    +SKSLYGR+GHLG TL KF+GD SGL +A R++E+F
Sbjct: 481 EGRMEGFGNKTMDNRIRELGLTGGKSKSLYGREGHLGITLFKFAGDDSGLRDAMRMAEYF 505

Query: 541 EKDNHGRTGWARVRPAAFSRDDDKNPNLVKVDEKSGERKRIFYGYLATAADMEKVDFDTR 591
           EK N GR  W RV+P   S+DD+KNP LV+VD ++GE+KRIFYGYLAT  D++KVD +T+
Sbjct: 541 EKINRGRKSWGRVQPLTPSKDDEKNPGLVEVDGRTGEKKRIFYGYLATVTDLDKVDVETK 505

[Close]

BLAST of CmoCh17G002200 vs. TAIR 10
Match: AT5G23570.1 (XS domain-containing protein / XS zinc finger domain-containing protein-related )

HSP 1 Score: 58.9 bits (141), Expect = 1.6e-08
Identity = 37/129 (28.68%), Postives = 60/129 (46.51%), Query Frame = 0


Query: 445 IMWPPLVIIHNTITGKSKDGRMEGLGNKAMDSKIRVWGTVESKSLYGRDGHLGTTLIKFS 504
           I+WPP+VII NT   K  + +  G+GN+ +      +  + ++  YG  GH G +++ F 
Sbjct: 301 IVWPPMVIIMNTRLDKDDNDKWLGMGNQELLEYFDKYEALRARHSYGPQGHRGMSVLMFE 360

Query: 505 GDQSGLNEAKRLSEFFEKDNHGRTGWARVRPAAFSRDDDKNPNLVKVDEKSGERKRIFYG 564
              +G  EA+RL     +    R  W + R + FS                G R+   YG
Sbjct: 361 SSATGYLEAERLHRELAEMGLDRIAWGQKR-SMFS---------------GGVRQ--LYG 411

Query: 565 YLATAADME 574
           +LAT  D++
Sbjct: 421 FLATKQDLD 411

[Close]

BLAST of CmoCh17G002200 vs. TAIR 10
Match: AT3G12550.1 (XH/XS domain-containing protein )

HSP 1 Score: 50.8 bits (120), Expect = 4.4e-06
Identity = 28/93 (30.11%), Postives = 50/93 (53.76%), Query Frame = 0


Query: 441 QEDLIMWPPLVIIHNTITGKSKDGR--MEGLGNKAMDSKI-RVWGTVESKSLYGRDGHLG 500
           Q + ++WP   ++ N  T  ++DGR      G K  D  I R +  +  ++++ R GH G
Sbjct: 116 QFEKLVWPWKGVLVNIPTTSTEDGRSCTGESGPKLKDELIRRGFNPIRVRTVWDRFGHSG 175

Query: 501 TTLIKFSGDQSGLNEAKRLSEFFEKDNHGRTGW 531
           T +++F+ D +GL +A    + +E D HG+  W
Sbjct: 176 TGIVEFNRDWNGLQDALVFKKAYEGDGHGKKDW 208

[Close]

BLAST of CmoCh17G002200 vs. TAIR 10
Match: AT3G12550.2 (XH/XS domain-containing protein )

HSP 1 Score: 50.8 bits (120), Expect = 4.4e-06
Identity = 28/93 (30.11%), Postives = 50/93 (53.76%), Query Frame = 0


Query: 441 QEDLIMWPPLVIIHNTITGKSKDGR--MEGLGNKAMDSKI-RVWGTVESKSLYGRDGHLG 500
           Q + ++WP   ++ N  T  ++DGR      G K  D  I R +  +  ++++ R GH G
Sbjct: 116 QFEKLVWPWKGVLVNIPTTSTEDGRSCTGESGPKLKDELIRRGFNPIRVRTVWDRFGHSG 175

Query: 501 TTLIKFSGDQSGLNEAKRLSEFFEKDNHGRTGW 531
           T +++F+ D +GL +A    + +E D HG+  W
Sbjct: 176 TGIVEFNRDWNGLQDALVFKKAYEGDGHGKKDW 208

The following BLAST results are available for this feature:

BLAST of CmoCh17G002200 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A5YVF1	1.5e-11	32.56	Protein SUPPRESSOR OF GENE SILENCING 3 OS=Solanum lycopersicum OX=4081 GN=SGS3 P...	[more]
A1Y2B7	3.4e-11	29.31	Protein SUPPRESSOR OF GENE SILENCING 3 homolog OS=Zea mays OX=4577 GN=SGS3 PE=1 ...	[more]
A2ZIW7	9.9e-11	27.91	Protein SUPPRESSOR OF GENE SILENCING 3 homolog OS=Oryza sativa subsp. indica OX=...	[more]
Q2QWE9	9.9e-11	27.91	Protein SUPPRESSOR OF GENE SILENCING 3 homolog OS=Oryza sativa subsp. japonica O...	[more]
Q9LDX1	2.3e-07	28.68	Protein SUPPRESSOR OF GENE SILENCING 3 OS=Arabidopsis thaliana OX=3702 GN=SGS3 P...	[more]

BLAST of CmoCh17G002200 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1L434	1.0e-305	90.95	uncharacterized protein LOC111498966 OS=Cucurbita maxima OX=3661 GN=LOC111498966...	[more]
A0A1S3BHM0	3.3e-283	85.09	uncharacterized protein LOC103489668 OS=Cucumis melo OX=3656 GN=LOC103489668 PE=...	[more]
A0A6J1EWJ6	5.8e-272	81.41	uncharacterized protein LOC111436786 OS=Cucurbita moschata OX=3662 GN=LOC1114367...	[more]
A0A6J1CA20	4.2e-270	80.94	uncharacterized protein LOC111009586 OS=Momordica charantia OX=3673 GN=LOC111009...	[more]
A0A6J1H4N8	7.9e-253	93.53	uncharacterized protein LOC111460445 OS=Cucurbita moschata OX=3662 GN=LOC1114604...	[more]

BLAST of CmoCh17G002200 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G22430.1	2.3e-119	44.92	CONTAINS InterPro DOMAIN/s: Domain of unknown function XS (InterPro:IPR005380); ...	[more]
AT5G23570.1	1.6e-08	28.68	XS domain-containing protein / XS zinc finger domain-containing protein-related	[more]
AT3G12550.1	4.4e-06	30.11	XH/XS domain-containing protein	[more]
AT3G12550.2	4.4e-06	30.11	XH/XS domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038588	XS domain superfamily	GENE3D	3.30.70.2890	XS domain	coord: 437..605 e-value: 4.1E-32 score: 113.2
IPR005380	XS domain	PFAM	PF03468	XS	coord: 442..573 e-value: 1.8E-26 score: 92.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..104
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..76
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 153..246
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 77..104
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 178..198
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 208..235
None	No IPR available	PANTHER	PTHR46619:SF3	RNA RECOGNITION MOTIF XS DOMAIN PROTEIN	coord: 1..594
None	No IPR available	PANTHER	PTHR46619	RNA RECOGNITION MOTIF XS DOMAIN PROTEIN-RELATED	coord: 1..594

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh17G002200.1	CmoCh17G002200.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031047	gene silencing by RNA
biological_process	GO:0006413	translational initiation
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003743	translation initiation factor activity