CmoCh17G001820 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh17G001820
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	protein SIEVE ELEMENT OCCLUSION B-like
Location	Cmo_Chr17: 1075492 .. 1079536 (-)
RNA-Seq Expression	CmoCh17G001820
Synteny	CmoCh17G001820

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCTATTCCACCTTCTTTCCTTCTGTTTTCACTTCTCTCTTCATCCAAACCATGGCCACTGCACCTGGATTGCTGGATCCTGTGCAGTCATCCACCTTTAAGGAGCAGATGAGAAAGAGACATTACAACGACTACTTTGTCTACGGCAGCATTAACTTCAAACATTTGAATGATGACTCAACTAAAATTGACATTCCAATTCCGAATTACATCTCAGCTATTGAGAGCATCATTACCGCTACAAATCGAATTACTGATACCGTTCATCATCGCGTAAAAATCTTTATTATTCTCCGTAAAGTTTGACACTTTCTTTATTTTTATAACGACATAACGAATAATTATTATCATACTCATGCAGGGGAGCGAAGGTTCATTAGATGTTAATGTTGTGATCGAGCCTCCGTTGTGTATTCTTAATCATATATCTAGCGAGGTCATTTTTCAATTTTTTAATAACCCTTTTGAAATCTCTAATCAAAATTTCAAAACATGCATCAAAGGAGATACCTTTTTGTTTCTTACAACTTTGATTTTAATATCATTTTCAGCTTTGGTGCAACCCTCCCGGGATTGGAAGTGCACACGAGAATACACTAACAATCTTCGAAATATTGGCAAATTATCCATGGGAAGCCAAGGCAGCTCTCACTTTGTTAGCCTTTGCAACAGATTATGGAGACTTATGGCATCCCTATCCTTATTCCCATACCGATCCATTGGCTAAATCATTGGCAATTATCAAGCGAGTAGGTATGTTGAAGAAGCACTTGGACTCGCTTCCATACCAACAAGTGCTTCTCAATCCTAACAGTCTCATTCAAATGTGCTTGCAAGCAATCAAACGTATGAATGAGATACGAGAATTCAAAAAATATTATCTCAATGACCCTCTTGAGTTAGCTTCTGCTCTTCGTCAGATTCCATTGGTTACTTATTGGGTTATACACATTATCGTGGCTTCTAGCATTGAGCTATCCAGCTATCTCACCGAAACCAAGTAAGTAATAATTTATCTGTTCACTTTTGTAAATGGTTAGAAATGTTTATTTAATCTGCCGAGTTGGGCTCGGTTTAGACCTGCCTTAAATGAATGAAACGGAGAATCCATGTGCCTTAAATGAATGAAATGGAGAATCCGATTTCTGTTCTTGGTGTGGGGGGAGTAGGAAGAGATTTTTGATCCCAACCTTGTTCAATTCTGGTAGGGGGAAGGGGGTAGGAAGAGATTTCTGATCCCGACCCTGTTCAATTCTGGTAGGGGGAAGGGGAGTGGGGGGGGGGGGGGGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGGGAGCAGGAAGAGATTTCTGATCCCGACCCTGTTCAATTCTGGTCTCAATTCTGGTCTCAATTCTGGTCTCATCTTGCTCTTGAAAATAAATGAAGAATTTCGTGAAGATGAAAATTGAAATATGAGTTGTGTAACGACCCAGATGCGCCGCTAGTAGATATTGTCGTTTTTGGGCTTTCCCTTGTGCTTCCCCTCGAGGCTTTAAAAGTTTGCATACCCTTAGGCGATGGTTTCCACACCCTTATAAATGGTGTTTTCTTCTCCTCCCCAACCAATGTGGGACATCACAAGATGAGATGGAGACAGAAAAGACTTCCCCATTTATGCCCTACTCTGTAACATCTCTACAAATAGTTGTGATCTTGCCGTGATCGAAAGAAAATGACAAACCGAGTCGATCGATTTAAGTTTTTATATAGTTTCTTAATTCATTAAAAATGTTAATTTTTTTTTTCAGAAATCAGACACAGAGATATTTGAATGAATTGTCGGAAACTATTGCGTTGGTACTCGCTAGACTTGAAAAGCATCTAGACGCCATCCGAGAACAGCATGGTGGAATATACTTTAAAGCCATCCATGATGTTATTGTTCGTTAATTAACAAGTGACCTGAAACATAACGTTAAATTTGTTGTGTTTCTAATGACAGAGGAAGTTGATCTCTACCGATGGTTGGTTGACCACATTGAGCATTTTCATACTAACATTGCATTAGTTGTTTCCAAGCTACTTAGCGGCAAACCTGAAACCAACCCAATAATTGATGGCTCAACTCAAAAAGAGGTAAAAGTTCTTAAATCAAGTAACACAAATATCAAAGTTGATGAACGAAACTTAAAAATGTATGTTTTTACAGGTTGGTGTTCATGAAAGTTTGTCGGGAAAGAACGTGGTATTGCTCATTTCGAGGTTGGATATCTCCGAGGATGATATCAAAGCTATTCATAATATTTATGATGAATTGAAAACTAGAGACACTAATTATGAGATAGTTTGGATTCCAATTATCCCGGAGCCTTATCATGAAGATGATCGCAAGAGATATGAGTATTTGCGTTCTACAATGAAGTGGTACTCAATCCAGTTTACTACAAGAATATCTGGCATGAGATACATCGAGGAGGAGTGGCAATTTAGAGAAGATCCATTAGTTGTGGTACTCAACCCAAATTCTAAAGTAGAATTCATGAATGCAATTCATCTAATTCGAGTTTGGGAAAATGAAGCTATCCCATTTACACAAGCAAGAACTGAATCTTTACTAAAAAAACATTGGCCCGAGTCAACTCTCCTCAAATTCACTCACCAACCAAGGCTACCAAATTTGGTAGGTATAGTACAATCATTCTCTATTTCTTTTCTTTTCTTTTCTTTTGATATCGTAAATGTTTAAGAACGATTTAGAACTTCGGATGAAAATTAAGACTTCAATAATGAAAATTTGAAGGGTAGTTTTCAAAATTAAGACTTCAATAATGAAAATTTCCAAGTTACTCCTATACCAGCTTAGGTCAACATTTACTCTAAGGGTAGTTTTCAAACATTTATAAGAAGTCAATAAATTTATTTTATTTTATTTTTTTTGATTGTTTAGACAGGTTTAGAGTGAGTTTAAAAGTGTTTAAAATTATTTGAGTTCCAAAGTGTTTAAAATTATTTTTACAAAGACAATCAAAATAACCCTTAAATCTCCTATTTTGAGTTGACCTATGTACTTTTGTCAAACAGATTAAGAGTCAGAAAAGTATTATATTTTATGGAGGAAGGAATCCATCATGGATCCAACAATTTGAAGAAAAAGTAGAAATTTTGAAAAACGATCCTTTGATACTCGATGGGAGTTCATTTGAGATCGTACGCATTGGAAAAGATGCAATAGGAGAGGATGATCCTAAACTCATGGCTCGTTTTTGGAAAGTACAATGGGGTTATTTTATAGTGAAGAGCCAGATAAAAGGTTTAAGTGCAAGCGAGACAAGTGAAGATATTTTAAGATTGATTTCTTACCAAAATGAAGATGGTTGGGCAGTTGTTACGATAGGCTCAGCCCCTTTGTTAGTTGGTAGTGGCATTTTGATTTTGAGATTGTTTGATGATTTCCCAAAATGGAAACAAAATTTGCACTTCAAGGCTTTCCCCAATGCTTTTAGAGACTCCTTCAATGAGCTGGCTATGAAGACTCATGAATGTGATCGAGTTATTTTTCCTGAATTTAGTGGATGGATTCCTATGGTTGTCAACTGTCCCGGATGTCCTCGTTTCATGCAGAAGGACATTACCTTTAAATGTTGTCATGGTGGCTCTCGCATGTGA

mRNA sequence

CCCTATTCCACCTTCTTTCCTTCTGTTTTCACTTCTCTCTTCATCCAAACCATGGCCACTGCACCTGGATTGCTGGATCCTGTGCAGTCATCCACCTTTAAGGAGCAGATGAGAAAGAGACATTACAACGACTACTTTGTCTACGGCAGCATTAACTTCAAACATTTGAATGATGACTCAACTAAAATTGACATTCCAATTCCGAATTACATCTCAGCTATTGAGAGCATCATTACCGCTACAAATCGAATTACTGATACCGTTCATCATCGCGGGAGCGAAGGTTCATTAGATGTTAATGTTGTGATCGAGCCTCCGTTGTGTATTCTTAATCATATATCTAGCGAGCTTTGGTGCAACCCTCCCGGGATTGGAAGTGCACACGAGAATACACTAACAATCTTCGAAATATTGGCAAATTATCCATGGGAAGCCAAGGCAGCTCTCACTTTGTTAGCCTTTGCAACAGATTATGGAGACTTATGGCATCCCTATCCTTATTCCCATACCGATCCATTGGCTAAATCATTGGCAATTATCAAGCGAGTAGGTATGTTGAAGAAGCACTTGGACTCGCTTCCATACCAACAAGTGCTTCTCAATCCTAACAGTCTCATTCAAATGTGCTTGCAAGCAATCAAACGTATGAATGAGATACGAGAATTCAAAAAATATTATCTCAATGACCCTCTTGAGTTAGCTTCTGCTCTTCGTCAGATTCCATTGGTTACTTATTGGGTTATACACATTATCGTGGCTTCTAGCATTGAGCTATCCAGCTATCTCACCGAAACCAAAAATCAGACACAGAGATATTTGAATGAATTGTCGGAAACTATTGCGTTGGTACTCGCTAGACTTGAAAAGCATCTAGACGCCATCCGAGAACAGCATGAGGAAGTTGATCTCTACCGATGGTTGGTTGACCACATTGAGCATTTTCATACTAACATTGCATTAGTTGTTTCCAAGCTACTTAGCGGCAAACCTGAAACCAACCCAATAATTGATGGCTCAACTCAAAAAGAGGTTGGTGTTCATGAAAGTTTGTCGGGAAAGAACGTGGTATTGCTCATTTCGAGGTTGGATATCTCCGAGGATGATATCAAAGCTATTCATAATATTTATGATGAATTGAAAACTAGAGACACTAATTATGAGATAGTTTGGATTCCAATTATCCCGGAGCCTTATCATGAAGATGATCGCAAGAGATATGAGTATTTGCGTTCTACAATGAAGTGGTACTCAATCCAGTTTACTACAAGAATATCTGGCATGAGATACATCGAGGAGGAGTGGCAATTTAGAGAAGATCCATTAGTTGTGATTAAGAGTCAGAAAAGTATTATATTTTATGGAGGAAGGAATCCATCATGGATCCAACAATTTGAAGAAAAAGTAGAAATTTTGAAAAACGATCCTTTGATACTCGATGGGAGTTCATTTGAGATCGTACGCATTGGAAAAGATGCAATAGGAGAGGATGATCCTAAACTCATGGCTCGTTTTTGGAAAGTACAATGGGGTTATTTTATAGTGAAGAGCCAGATAAAAGGTTTAAGTGCAAGCGAGACAAGTGAAGATATTTTAAGATTGATTTCTTACCAAAATGAAGATGGTTGGGCAGTTGTTACGATAGGCTCAGCCCCTTTGTTAGTTGGTAGTGGCATTTTGATTTTGAGATTGTTTGATGATTTCCCAAAATGGAAACAAAATTTGCACTTCAAGGCTTTCCCCAATGCTTTTAGAGACTCCTTCAATGAGCTGGCTATGAAGACTCATGAATGTGATCGAGTTATTTTTCCTGAATTTAGTGGATGGATTCCTATGGTTGTCAACTGTCCCGGATGTCCTCGTTTCATGCAGAAGGACATTACCTTTAAATGTTGTCATGGTGGCTCTCGCATGTGA

Coding sequence (CDS)

ATGGCCACTGCACCTGGATTGCTGGATCCTGTGCAGTCATCCACCTTTAAGGAGCAGATGAGAAAGAGACATTACAACGACTACTTTGTCTACGGCAGCATTAACTTCAAACATTTGAATGATGACTCAACTAAAATTGACATTCCAATTCCGAATTACATCTCAGCTATTGAGAGCATCATTACCGCTACAAATCGAATTACTGATACCGTTCATCATCGCGGGAGCGAAGGTTCATTAGATGTTAATGTTGTGATCGAGCCTCCGTTGTGTATTCTTAATCATATATCTAGCGAGCTTTGGTGCAACCCTCCCGGGATTGGAAGTGCACACGAGAATACACTAACAATCTTCGAAATATTGGCAAATTATCCATGGGAAGCCAAGGCAGCTCTCACTTTGTTAGCCTTTGCAACAGATTATGGAGACTTATGGCATCCCTATCCTTATTCCCATACCGATCCATTGGCTAAATCATTGGCAATTATCAAGCGAGTAGGTATGTTGAAGAAGCACTTGGACTCGCTTCCATACCAACAAGTGCTTCTCAATCCTAACAGTCTCATTCAAATGTGCTTGCAAGCAATCAAACGTATGAATGAGATACGAGAATTCAAAAAATATTATCTCAATGACCCTCTTGAGTTAGCTTCTGCTCTTCGTCAGATTCCATTGGTTACTTATTGGGTTATACACATTATCGTGGCTTCTAGCATTGAGCTATCCAGCTATCTCACCGAAACCAAAAATCAGACACAGAGATATTTGAATGAATTGTCGGAAACTATTGCGTTGGTACTCGCTAGACTTGAAAAGCATCTAGACGCCATCCGAGAACAGCATGAGGAAGTTGATCTCTACCGATGGTTGGTTGACCACATTGAGCATTTTCATACTAACATTGCATTAGTTGTTTCCAAGCTACTTAGCGGCAAACCTGAAACCAACCCAATAATTGATGGCTCAACTCAAAAAGAGGTTGGTGTTCATGAAAGTTTGTCGGGAAAGAACGTGGTATTGCTCATTTCGAGGTTGGATATCTCCGAGGATGATATCAAAGCTATTCATAATATTTATGATGAATTGAAAACTAGAGACACTAATTATGAGATAGTTTGGATTCCAATTATCCCGGAGCCTTATCATGAAGATGATCGCAAGAGATATGAGTATTTGCGTTCTACAATGAAGTGGTACTCAATCCAGTTTACTACAAGAATATCTGGCATGAGATACATCGAGGAGGAGTGGCAATTTAGAGAAGATCCATTAGTTGTGATTAAGAGTCAGAAAAGTATTATATTTTATGGAGGAAGGAATCCATCATGGATCCAACAATTTGAAGAAAAAGTAGAAATTTTGAAAAACGATCCTTTGATACTCGATGGGAGTTCATTTGAGATCGTACGCATTGGAAAAGATGCAATAGGAGAGGATGATCCTAAACTCATGGCTCGTTTTTGGAAAGTACAATGGGGTTATTTTATAGTGAAGAGCCAGATAAAAGGTTTAAGTGCAAGCGAGACAAGTGAAGATATTTTAAGATTGATTTCTTACCAAAATGAAGATGGTTGGGCAGTTGTTACGATAGGCTCAGCCCCTTTGTTAGTTGGTAGTGGCATTTTGATTTTGAGATTGTTTGATGATTTCCCAAAATGGAAACAAAATTTGCACTTCAAGGCTTTCCCCAATGCTTTTAGAGACTCCTTCAATGAGCTGGCTATGAAGACTCATGAATGTGATCGAGTTATTTTTCCTGAATTTAGTGGATGGATTCCTATGGTTGTCAACTGTCCCGGATGTCCTCGTTTCATGCAGAAGGACATTACCTTTAAATGTTGTCATGGTGGCTCTCGCATGTGA

Protein sequence

MATAPGLLDPVQSSTFKEQMRKRHYNDYFVYGSINFKHLNDDSTKIDIPIPNYISAIESIITATNRITDTVHHRGSEGSLDVNVVIEPPLCILNHISSELWCNPPGIGSAHENTLTIFEILANYPWEAKAALTLLAFATDYGDLWHPYPYSHTDPLAKSLAIIKRVGMLKKHLDSLPYQQVLLNPNSLIQMCLQAIKRMNEIREFKKYYLNDPLELASALRQIPLVTYWVIHIIVASSIELSSYLTETKNQTQRYLNELSETIALVLARLEKHLDAIREQHEEVDLYRWLVDHIEHFHTNIALVVSKLLSGKPETNPIIDGSTQKEVGVHESLSGKNVVLLISRLDISEDDIKAIHNIYDELKTRDTNYEIVWIPIIPEPYHEDDRKRYEYLRSTMKWYSIQFTTRISGMRYIEEEWQFREDPLVVIKSQKSIIFYGGRNPSWIQQFEEKVEILKNDPLILDGSSFEIVRIGKDAIGEDDPKLMARFWKVQWGYFIVKSQIKGLSASETSEDILRLISYQNEDGWAVVTIGSAPLLVGSGILILRLFDDFPKWKQNLHFKAFPNAFRDSFNELAMKTHECDRVIFPEFSGWIPMVVNCPGCPRFMQKDITFKCCHGGSRM

Homology

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BLAST of CmoCh17G001820 vs. ExPASy Swiss-Prot
Match: Q9SS87 (Protein SIEVE ELEMENT OCCLUSION B OS=Arabidopsis thaliana OX=3702 GN=SEOB PE=1 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 4.1e-28
Identity = 97/343 (28.28%), Postives = 168/343 (48.98%), Query Frame = 0


Query: 110 AHENTLTIFEILANYPWEAKAALTLLAFATDYGDLWHPYPYSHTDPLAKSLAIIKRVGML 169
           +HE T+++FE L+++ W+ K  LTL AFA +YG+ W    +   + LAKSLA++K V + 
Sbjct: 127 SHEITMSVFEHLSSFQWDGKLVLTLAAFALNYGEFWLLVQFYSKNQLAKSLAMLKLVPVQ 186

Query: 170 KKHLDSLPYQQVLLNPNSLIQMCLQAIKRMNEIREFKKYYLN-DPLELASALRQIPLVTY 229
            +    +  + V    N LI+        + E+ E    Y+  D  +L+  L  IP+  Y
Sbjct: 187 NR----VTLESVSQGLNDLIREMKSVTACVVELSELPDRYITPDVPQLSRILSTIPIAVY 246

Query: 230 WVIHIIVA--SSIELSSYLTETKNQTQRYLNELSETIALVLARLEKHL-DAIR------E 289
           W I  ++A  S I + + +      TQ  L E S  +A  L  +  HL + +R      E
Sbjct: 247 WTIRSVIACISQINMITAMGHEMMNTQMDLWETS-MLANKLKNIHDHLAETLRLCYRHIE 306

Query: 290 QHEEVDLYRWLVDHIEHFHTNIALVVSKLLSGKPETNPIIDGSTQKEVGVHESLSGKNVV 349
           +    +  + L    +  H +   +++ L+  KP   P+ DG T+++V + + L  K V+
Sbjct: 307 KQRSSESLKVLHSLFDTTHIDNMKILTALVHPKPHITPLQDGLTKRKVHL-DVLRRKTVL 366

Query: 350 LLISRLDISEDDIKAIHNIYDELKTR--------DTNYEIVWIPIIPEPYHEDDR----- 409
           LLIS L+I +D++     IY E +             YE+VW+P++ +P  + +R     
Sbjct: 367 LLISDLNILQDELSIFEQIYTESRRNLVGVDGKSHMPYEVVWVPVV-DPIEDFERSPILQ 426

Query: 410 KRYEYLRSTMKWYSIQFTTRISG--MRYIEEEWQFREDPLVVI 428
           K++E LR  M WYS+     I    + ++   W F   P++V+
Sbjct: 427 KKFEDLRDPMPWYSVDSPKLIERHVVEFMRGRWHFMNKPILVV 462

[Close]

BLAST of CmoCh17G001820 vs. ExPASy Swiss-Prot
Match: Q93XX2 (Protein SIEVE ELEMENT OCCLUSION A OS=Arabidopsis thaliana OX=3702 GN=SEOA PE=1 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 6.1e-16
Identity = 84/351 (23.93%), Postives = 163/351 (46.44%), Query Frame = 0


Query: 107 IGSAHENTLTIFEILANYPWEAKAALTLLAFATDYGDLWHPYPYSHTDPLAKSLAIIKRV 166
           + S +  T ++  +++ Y W+AK  L L A A  YG          T+ L KSLA+IK++
Sbjct: 231 LDSRNTTTFSVLSLVSKYRWDAKLVLVLSALAVKYGVFLLLAETHATNQLTKSLALIKQL 290

Query: 167 GMLKKHLDSLPYQQVLLNPNSLIQMCLQAIKRMNEIREFKKYYLNDPLELASALRQIPLV 226
             +    ++L   Q L     L+Q  +     + +I +    ++      A+    IP  
Sbjct: 291 PSIFSRQNAL--HQRLDKTRILMQDMVDLTTTIIDIYQLPPNHIT-----AAFTDHIPTA 350

Query: 227 TYWVIHIIVASSIELSSYLTETKNQTQRY-----LNELSETIALVLARLEKHLDAIREQH 286
            YW++  ++     +S      ++Q   +     ++E SE +  + A L +     +   
Sbjct: 351 VYWIVRCVLICVSHISGASGFKQDQIMSFMEVSEIHENSERLRKINAYLLEQFKKSKMTI 410

Query: 287 EEVDLYRWLVDHIEHFHTNIAL-VVSKLLSGKPETNPIIDGS--TQKEVGVHESLSGKNV 346
           EE  +     + I+ F T I + VV  LL      + +  G+  +++ VG++  L+ K+V
Sbjct: 411 EEGIIEEEYQELIQTFTTIIHVDVVPPLLRLLRPIDFLYHGAGVSKRRVGIN-VLTQKHV 470

Query: 347 VLLISRLDISEDDIKAIHNIYDELKTRDTNYEIVWIPIIPEPYHEDDRKRYEYLRSTMKW 406
           +LLIS L+  E ++  + ++Y E      ++EI+W+P + + + E D  ++E L   M+W
Sbjct: 471 LLLISDLENIEKELYILESLYTE--AWQQSFEILWVP-VQDFWTEADDAKFEALHMNMRW 530

Query: 407 YSIQFTTRI--SGMRYIEEEWQFREDPLVVIKSQKSIIFYGGRNPS-WIQQ 447
           Y +    ++  + +R++ E W F+  P++V    K  +      P  WI Q
Sbjct: 531 YVLGEPRKLRRAAIRFVREWWGFKNRPILVALDPKGQVMSTNAFPMVWIWQ 570

[Close]

BLAST of CmoCh17G001820 vs. ExPASy Swiss-Prot
Match: Q9FXE2 (Protein SIEVE ELEMENT OCCLUSION C OS=Arabidopsis thaliana OX=3702 GN=SEOC PE=4 SV=2)

HSP 1 Score: 80.1 bits (196), Expect = 9.7e-14
Identity = 88/363 (24.24%), Postives = 161/363 (44.35%), Query Frame = 0


Query: 96  ISSELWCNPPGIGSAHENTLTIFEILANYPWEAKAALTLLAFATDYGDLWHPYPYSHTDP 155
           IS ++ C   G     + T+ +F++L  Y W+AKA L L   A  YG L  P   +  DP
Sbjct: 80  ISVQMLCPCTGENEIRKRTMVLFDLLKEYRWDAKAVLVLGVLAATYGGLLLPVHLAICDP 139

Query: 156 LAKSLAIIKRVGMLKKHLDSLPYQQVLLNP-----NSLIQMCLQAIKRMNEIRE--FKKY 215
           +A S+A           L+ LP ++    P     N LI+  +   K + +  +  FK+ 
Sbjct: 140 VAASIA----------KLNQLPIERTKFRPWLESLNLLIKAMVDVTKCIIKFEKIPFKQA 199

Query: 216 YLNDPLELASALRQIPLVTYWVIHIIVASSIELSSY------------LTETKNQTQRYL 275
            L++ + L   L  I L TY V+   +    ++  +              E   +++R  
Sbjct: 200 KLDNNI-LGETLSNIYLTTYRVVKSALTCMQQIPYFKQTQQAKKSRKTAAELSIESRRAA 259

Query: 276 NELSE---TIALVLARLEKHLDAIREQHEEVDLYRWLVDHIEHFHTNIALVVSKLLSGKP 335
            ELS     +  +  RL K ++    Q EE    R    +IE    N    V  LL    
Sbjct: 260 GELSSLGYQLLNIHTRLNKQVEDCSTQIEEEINQRLRNINIETHQDN--QDVLHLLFSLQ 319

Query: 336 ETNPIIDGSTQKEVGVHESLSGKNVVLLISRLDISEDDIKAIHNIYDELKTRDT--NYEI 395
           +  P+   S Q  +     +  K  +LL+S+  + E     +  +YD     +T  NYEI
Sbjct: 320 DDLPLQQYSRQISI---TEVQDKVTLLLLSKPPV-EPLFFLLQQLYDHPSNTNTEQNYEI 379

Query: 396 VWIPI-IPEPYHEDDRKRYEYLRSTMKWYSIQFTTRISG--MRYIEEEWQFREDP--LVV 430
           +W+PI   + + +++++ +++  +++ W S++    +S   + + ++EW ++++   LVV
Sbjct: 380 IWVPIPSSQKWTDEEKEIFDFYSNSLPWISVRQPWLMSSTILNFFKQEWHYKDNEAMLVV 425

[Close]

BLAST of CmoCh17G001820 vs. ExPASy TrEMBL
Match: A0A6J1H3S9 (protein SIEVE ELEMENT OCCLUSION B-like OS=Cucurbita moschata OX=3662 GN=LOC111460158 PE=4 SV=1)

HSP 1 Score: 1248.0 bits (3228), Expect = 0.0e+00
Identity = 620/677 (91.58%), Postives = 620/677 (91.58%), Query Frame = 0


Query: 1   MATAPGLLDPVQSSTFKEQMRKRHYNDYFVYGSINFKHLNDDSTKIDIPIPNYISAIESI 60
           MATAPGLLDPVQSSTFKEQMRKRHYNDYFVYGSINFKHLNDDSTKIDIPIPNYISAIESI
Sbjct: 1   MATAPGLLDPVQSSTFKEQMRKRHYNDYFVYGSINFKHLNDDSTKIDIPIPNYISAIESI 60

Query: 61  ITATNRITDTVHHRGSEGSLDVNVVIEPPLCILNHISSELWCNPPGIGSAHENTLTIFEI 120
           ITATNRITDTVHHRGSEGSLDVNVVIEPPLCILNHISSELWCNPPGIGSAHENTLTIFEI
Sbjct: 61  ITATNRITDTVHHRGSEGSLDVNVVIEPPLCILNHISSELWCNPPGIGSAHENTLTIFEI 120

Query: 121 LANYPWEAKAALTLLAFATDYGDLWHPYPYSHTDPLAKSLAIIKRVGMLKKHLDSLPYQQ 180
           LANYPWEAKAALTLLAFATDYGDLWHPYPYSHTDPLAKSLAIIKRVGMLKKHLDSLPYQQ
Sbjct: 121 LANYPWEAKAALTLLAFATDYGDLWHPYPYSHTDPLAKSLAIIKRVGMLKKHLDSLPYQQ 180

Query: 181 VLLNPNSLIQMCLQAIKRMNEIREFKKYYLNDPLELASALRQIPLVTYWVIHIIVASSIE 240
           VLLNPNSLIQMCLQAIKRMNEIREFKKYYLNDPLELASALRQIPLVTYWVIHIIVASSIE
Sbjct: 181 VLLNPNSLIQMCLQAIKRMNEIREFKKYYLNDPLELASALRQIPLVTYWVIHIIVASSIE 240

Query: 241 LSSYLTETKNQTQRYLNELSETIALVLARLEKHLDAIREQHEEVDLYRWLVDHIEHFHTN 300
           LSSYLTETKNQTQRYLNELSETIALVLARLEKHLDAIREQHEEVDLYRWLVDHIEHFHTN
Sbjct: 241 LSSYLTETKNQTQRYLNELSETIALVLARLEKHLDAIREQHEEVDLYRWLVDHIEHFHTN 300

Query: 301 IALVVSKLLSGKPETNPIIDGSTQKEVGVHESLSGKNVVLLISRLDISEDDIKAIHNIYD 360
           IALVVSKLLSGKPETNPIIDGSTQKEVGVHESLSGKNVVLLISRLDISEDDIKAIHNIYD
Sbjct: 301 IALVVSKLLSGKPETNPIIDGSTQKEVGVHESLSGKNVVLLISRLDISEDDIKAIHNIYD 360

Query: 361 ELKTRDTNYEIVWIPIIPEPYHEDDRKRYEYLRSTMKWYSIQFTTRISGMRYIEEEWQFR 420
           ELKTRDTNYEIVWIPIIPEPYHEDDRKRYEYLRSTMKWYSIQFTTRISGMRYIEEEWQFR
Sbjct: 361 ELKTRDTNYEIVWIPIIPEPYHEDDRKRYEYLRSTMKWYSIQFTTRISGMRYIEEEWQFR 420

Query: 421 EDPLVV------------------------------------------------------ 480
           EDPLVV                                                      
Sbjct: 421 EDPLVVVLNPNSKVEFMNAIHLIRVWENEAIPFTQARTESLLKKHWPESTLLKFTHQPRL 480

Query: 481 ---IKSQKSIIFYGGRNPSWIQQFEEKVEILKNDPLILDGSSFEIVRIGKDAIGEDDPKL 540
              IKSQKSIIFYGGRNPSWIQQFEEKVEILKNDPLILDGSSFEIVRIGKDAIGEDDPKL
Sbjct: 481 PNLIKSQKSIIFYGGRNPSWIQQFEEKVEILKNDPLILDGSSFEIVRIGKDAIGEDDPKL 540

Query: 541 MARFWKVQWGYFIVKSQIKGLSASETSEDILRLISYQNEDGWAVVTIGSAPLLVGSGILI 600
           MARFWKVQWGYFIVKSQIKGLSASETSEDILRLISYQNEDGWAVVTIGSAPLLVGSGILI
Sbjct: 541 MARFWKVQWGYFIVKSQIKGLSASETSEDILRLISYQNEDGWAVVTIGSAPLLVGSGILI 600

Query: 601 LRLFDDFPKWKQNLHFKAFPNAFRDSFNELAMKTHECDRVIFPEFSGWIPMVVNCPGCPR 621
           LRLFDDFPKWKQNLHFKAFPNAFRDSFNELAMKTHECDRVIFPEFSGWIPMVVNCPGCPR
Sbjct: 601 LRLFDDFPKWKQNLHFKAFPNAFRDSFNELAMKTHECDRVIFPEFSGWIPMVVNCPGCPR 660

[Close]

BLAST of CmoCh17G001820 vs. ExPASy TrEMBL
Match: A0A6J1H6V1 (protein SIEVE ELEMENT OCCLUSION B-like OS=Cucurbita moschata OX=3662 GN=LOC111460156 PE=4 SV=1)

HSP 1 Score: 953.0 bits (2462), Expect = 6.3e-274
Identity = 483/682 (70.82%), Postives = 533/682 (78.15%), Query Frame = 0


Query: 3   TAPGLLDPVQSSTFKEQMRKRHYNDYFVYGSINFKHLNDDSTKIDIPIPNYISAIESIIT 62
           T+ GLL P QSST KE+M  RHY+D  V G I  +H +DDSTKID  +PNYIS IESIIT
Sbjct: 10  TSHGLLHPKQSSTSKEEMSVRHYSDKLVTGHIYAQHRDDDSTKID--LPNYISIIESIIT 69

Query: 63  ATNRITDTVHHRGSEG-------SLDVNVVIEPPLCILNHISSELWCNPPGIGSAHENTL 122
             +RIT+TV HRGSEG       SL  NVVIEPPLC L+HISSEL C  PG+  AHE TL
Sbjct: 70  TADRITETV-HRGSEGRVVYSDDSLASNVVIEPPLCTLHHISSELSCKAPGVEKAHETTL 129

Query: 123 TIFEILANYPWEAKAALTLLAFATDYGDLWHPYPYSHTDPLAKSLAIIKRVGMLKKHLDS 182
            IFEILANYPWEAKAALTLLAFATDYGDLWH Y YSHTDPLAKSLAIIKRV  LKKHLDS
Sbjct: 130 KIFEILANYPWEAKAALTLLAFATDYGDLWHLYHYSHTDPLAKSLAIIKRVATLKKHLDS 189

Query: 183 LPYQQVLLNPNSLIQMCLQAIKRMNEIREFKKYYLNDPLELASALRQIPLVTYWVIHIIV 242
           L Y+QVLLNP SLIQ CLQAIK M+EIREF KY + +   L +ALR IPL TYWVIH IV
Sbjct: 190 LRYRQVLLNPKSLIQSCLQAIKYMDEIREFSKYDVKELTALPAALRLIPLFTYWVIHTIV 249

Query: 243 ASSIELSSYLTETKNQTQRYLNELSETIALVLARLEKHLDAIREQHEEVDLYRWLVDHIE 302
           AS IELSSYL+ET+NQ Q YLNELS+ I  VL  +E+HL AIR+  EEVDLYRWLVDHIE
Sbjct: 250 ASRIELSSYLSETENQPQLYLNELSDKITSVLTDIERHLYAIRDLKEEVDLYRWLVDHIE 309

Query: 303 HFHTNIALVVSKLLSGKPETNPIIDGSTQKEVGVHESLSGKNVVLLISRLDISEDDIKAI 362
           H+HT I LV+SKL+ G+PETNPIIDGSTQKEVG+HESLS KNV+LLIS LDISEDDI+A+
Sbjct: 310 HYHTGIPLVISKLVDGRPETNPIIDGSTQKEVGIHESLSEKNVILLISGLDISEDDIRAL 369

Query: 363 HNIYDELKTRDTNYEIVWIPIIPEPYHEDDRKRYEYLRSTMKWYSIQFTTRISGMRYIEE 422
           H IYDELK R+ NYEIVWIPIIPEPYHEDDRK YEYLRSTMKW SIQFTT+ISGMRYIEE
Sbjct: 370 HKIYDELKARNANYEIVWIPIIPEPYHEDDRKMYEYLRSTMKWLSIQFTTKISGMRYIEE 429

Query: 423 EWQFREDPLVV------------------------------------------------- 482
           +WQFREDPLVV                                                 
Sbjct: 430 KWQFREDPLVVVLNPNSKVEFMNAIHLIRVWENEAIPFTQARTESLLKKHWPESTLLKFT 489

Query: 483 --------IKSQKSIIFYGGRNPSWIQQFEEKVEILKNDPLILDGSSFEIVRIGKDAIGE 542
                   IKSQKSIIFYGG+N +WIQQFEEKVE+LK+DPLI+DG SFEIVRIGKDAIGE
Sbjct: 490 HQPRLPNWIKSQKSIIFYGGKNQAWIQQFEEKVEVLKSDPLIIDGGSFEIVRIGKDAIGE 549

Query: 543 DDPKLMARFWKVQWGYFIVKSQIKGLSASETSEDILRLISYQNEDGWAVVTIGSAPLLVG 602
           DDPKLMARFWKVQWGYFIVKSQIKG SASET+EDILRLISYQNEDGWAV+T+GSAP+L+G
Sbjct: 550 DDPKLMARFWKVQWGYFIVKSQIKGSSASETTEDILRLISYQNEDGWAVLTVGSAPVLIG 609

Query: 603 SGILILRLFDDFPKWKQNLHFKAFPNAFRDSFNELAMKTHECDRVIFPEFSGWIPMVVNC 621
             +LILRL DDFPKWKQ L  KAFP+AFR+ FN+LAMKTH+CDRVI P FSGWIPMVVNC
Sbjct: 610 RDVLILRLIDDFPKWKQTLRLKAFPDAFREYFNDLAMKTHQCDRVILPGFSGWIPMVVNC 669

[Close]

BLAST of CmoCh17G001820 vs. ExPASy TrEMBL
Match: A0A6J1L2X0 (protein SIEVE ELEMENT OCCLUSION B-like OS=Cucurbita maxima OX=3661 GN=LOC111499361 PE=4 SV=1)

HSP 1 Score: 934.9 bits (2415), Expect = 1.8e-268
Identity = 476/682 (69.79%), Postives = 525/682 (76.98%), Query Frame = 0


Query: 3   TAPGLLDPVQSSTFKEQMRKRHYNDYFVYGSINFKHLNDDSTKIDIPIPNYISAIESIIT 62
           TAPGLL P QSST KE++  RHY+D  V G I  KH +DDSTKID  +PNYIS IESIIT
Sbjct: 10  TAPGLLHPKQSSTSKEELSLRHYSDELVTGHIYAKHSDDDSTKID--LPNYISVIESIIT 69

Query: 63  ATNRITDTVHHRGSEG-------SLDVNVVIEPPLCILNHISSELWCNPPGIGSAHENTL 122
             +RIT+TV HRGSEG       SL  NVVIEPPLC L+ ISSEL C  PGI  AHE TL
Sbjct: 70  TADRITETV-HRGSEGRLVYSDDSLASNVVIEPPLCTLHRISSELSCKAPGIEKAHETTL 129

Query: 123 TIFEILANYPWEAKAALTLLAFATDYGDLWHPYPYSHTDPLAKSLAIIKRVGMLKKHLDS 182
            IFEILANYPWEAKAALTLLAFA DYGDLWH Y YSHTDPLAKSLA+IKRV  LKKHLDS
Sbjct: 130 KIFEILANYPWEAKAALTLLAFAADYGDLWHLYHYSHTDPLAKSLAVIKRVATLKKHLDS 189

Query: 183 LPYQQVLLNPNSLIQMCLQAIKRMNEIREFKKYYLNDPLELASALRQIPLVTYWVIHIIV 242
           L Y+QVLLNP SLIQ CLQAIK MNEIREF KY + +  EL +ALR IPL TYW+IH IV
Sbjct: 190 LRYRQVLLNPKSLIQSCLQAIKYMNEIREFSKYDVKELPELPAALRLIPLFTYWIIHTIV 249

Query: 243 ASSIELSSYLTETKNQTQRYLNELSETIALVLARLEKHLDAIREQHEEVDLYRWLVDHIE 302
           AS IELSSYL+ET+NQ Q YLNELS+ IA VLA +E+HL+AIR Q +EVDLYRWLVDH+E
Sbjct: 250 ASRIELSSYLSETENQPQLYLNELSDKIARVLAEIERHLEAIRVQQDEVDLYRWLVDHVE 309

Query: 303 HFHTNIALVVSKLLSGKPETNPIIDGSTQKEVGVHESLSGKNVVLLISRLDISEDDIKAI 362
           H+HT I LVVSKL+SG+PETNPIIDGSTQKEVGVHESL  KNV+LLIS LDI EDDI+A+
Sbjct: 310 HYHTGIPLVVSKLISGRPETNPIIDGSTQKEVGVHESLLEKNVILLISDLDILEDDIRAL 369

Query: 363 HNIYDELKTRDTNYEIVWIPIIPEPYHEDDRKRYEYLRSTMKWYSIQFTTRISGMRYIEE 422
           H IYDELK RD NYEIVWIPI PEPYHEDD +RYEYLRS+MKWYSIQFTT+ISGMRYIEE
Sbjct: 370 HKIYDELKARDANYEIVWIPIFPEPYHEDDLRRYEYLRSSMKWYSIQFTTKISGMRYIEE 429

Query: 423 EWQFREDPLVV------------------------------------------------- 482
           +WQFREDPLVV                                                 
Sbjct: 430 KWQFREDPLVVVLNPQSKVEFMNAIHLIRVWENEAIPFTHARTEFLLKKHWPESTLLKFT 489

Query: 483 --------IKSQKSIIFYGGRNPSWIQQFEEKVEILKNDPLILDGSSFEIVRIGKDAIGE 542
                   I SQKSIIFYGG++ SWIQQFEEKVEILK DPLI++G SFEIVRIGKDA  E
Sbjct: 490 HQPRLPNWINSQKSIIFYGGKSQSWIQQFEEKVEILKGDPLIINGGSFEIVRIGKDATRE 549

Query: 543 DDPKLMARFWKVQWGYFIVKSQIKGLSASETSEDILRLISYQNEDGWAVVTIGSAPLLVG 602
           DDPKLMARFWKVQWGYF+VKSQIKG SASET+EDILRLISYQNEDGWAV+T+G AP+LVG
Sbjct: 550 DDPKLMARFWKVQWGYFVVKSQIKGSSASETTEDILRLISYQNEDGWAVLTVGLAPVLVG 609

Query: 603 SGILILRLFDDFPKWKQNLHFKAFPNAFRDSFNELAMKTHECDRVIFPEFSGWIPMVVNC 621
             ILILRL DDFP+WK  L  KAFP+AFRD FN+LAMK H CD++  P FSG IPMV+NC
Sbjct: 610 RDILILRLLDDFPEWKSTLRLKAFPDAFRDYFNDLAMKIHRCDQISLPGFSGSIPMVINC 669

[Close]

BLAST of CmoCh17G001820 vs. ExPASy TrEMBL
Match: A0A6J1L5P1 (protein SIEVE ELEMENT OCCLUSION B-like OS=Cucurbita maxima OX=3661 GN=LOC111499360 PE=4 SV=1)

HSP 1 Score: 917.5 bits (2370), Expect = 2.9e-263
Identity = 460/681 (67.55%), Postives = 525/681 (77.09%), Query Frame = 0


Query: 4   APGLLDPVQSSTFKEQMRKRHYNDYFVYGSINFKHLNDDSTKIDIPIPNYISAIESIITA 63
           AP LL    +   KE++  +H++D  V G I  KH +DD TKID  +PNYIS IE+IIT 
Sbjct: 12  APSLLHSKHAFAHKEEVGTKHFSDEIVTGHIYAKHRDDDRTKID--LPNYISVIENIITT 71

Query: 64  TNRITDTVHHRGSEG-------SLDVNVVIEPPLCILNHISSELWCNPPGIGSAHENTLT 123
            ++I DTV HRG++G       SL  NVVIEPPLC L+ ISSEL C  PGI  AHE TL 
Sbjct: 72  ADQIIDTV-HRGTDGRLVHSDASLAFNVVIEPPLCTLHRISSELSCKAPGIEKAHETTLE 131

Query: 124 IFEILANYPWEAKAALTLLAFATDYGDLWHPYPYSHTDPLAKSLAIIKRVGMLKKHLDSL 183
           IFEILANYPWEAKAALTL+AFA DYGDLWH + YSH DPLAKSLAIIKRV  LKKHLDSL
Sbjct: 132 IFEILANYPWEAKAALTLIAFAADYGDLWHLHHYSHADPLAKSLAIIKRVATLKKHLDSL 191

Query: 184 PYQQVLLNPNSLIQMCLQAIKRMNEIREFKKYYLNDPLELASALRQIPLVTYWVIHIIVA 243
            Y+QVLLNP SLIQ CLQAIK M+EIREF KY + +  EL +ALRQIPLVTYWVIH IVA
Sbjct: 192 RYRQVLLNPKSLIQSCLQAIKYMDEIREFSKYDVKELSELPAALRQIPLVTYWVIHTIVA 251

Query: 244 SSIELSSYLTETKNQTQRYLNELSETIALVLARLEKHLDAIREQHEEVDLYRWLVDHIEH 303
           S IELSSYL+ET+NQ QRYLN+LSE +A VL  LEKHL+ +REQHEEVDLYRWLVDHIEH
Sbjct: 252 SRIELSSYLSETENQPQRYLNDLSEKMARVLDLLEKHLETLREQHEEVDLYRWLVDHIEH 311

Query: 304 FHTNIALVVSKLLSGKPETNPIIDGSTQKEVGVHESLSGKNVVLLISRLDISEDDIKAIH 363
           + T+I LVV KLLSGK ET P+IDGST +EVGVHESLSGKNV+L+IS LDISEDDIKAIH
Sbjct: 312 YRTDITLVVPKLLSGKTETKPLIDGSTLREVGVHESLSGKNVILVISGLDISEDDIKAIH 371

Query: 364 NIYDELKTRDTNYEIVWIPIIPEPYHEDDRKRYEYLRSTMKWYSIQFTTRISGMRYIEEE 423
           N+YDELK R TNYEIVWIPIIPEPYHEDD K+YEYLRSTMKWYSIQFTT+ISGMRY+EE+
Sbjct: 372 NVYDELKNRGTNYEIVWIPIIPEPYHEDDHKKYEYLRSTMKWYSIQFTTKISGMRYLEEK 431

Query: 424 WQFREDPLVV-------------------------------------------------- 483
           WQ REDPLVV                                                  
Sbjct: 432 WQLREDPLVVVLSPQSEVVFMNAIHLIRVWGTEAIDFKEDRAKFLLRKNWPDSTLVKFTH 491

Query: 484 -------IKSQKSIIFYGGRNPSWIQQFEEKVEILKNDPLILDGSSFEIVRIGKDAIGED 543
                  IK +KSI+FYGG+ P WIQQFEE+VEILK+DPLI DG SFEIVRIGK+A GED
Sbjct: 492 QPRLQSWIKQEKSILFYGGKEPMWIQQFEERVEILKSDPLIRDGGSFEIVRIGKNAKGED 551

Query: 544 DPKLMARFWKVQWGYFIVKSQIKGLSASETSEDILRLISYQNEDGWAVVTIGSAPLLVGS 603
           DP LMARFWK+QWGYFIVKSQ+ G SASET+EDILRLISYQNE+GW V+++GSAP+LVG 
Sbjct: 552 DPALMARFWKIQWGYFIVKSQLIGSSASETTEDILRLISYQNEEGWVVLSVGSAPVLVGR 611

Query: 604 GILILRLFDDFPKWKQNLHFKAFPNAFRDSFNELAMKTHECDRVIFPEFSGWIPMVVNCP 621
           GILIL+L ++FPKWKQ+L  KAFP+AFR+ FNELA+K+H+CDRVI P FSGWIPM+VNCP
Sbjct: 612 GILILKLLEEFPKWKQSLRLKAFPDAFREYFNELALKSHQCDRVILPGFSGWIPMIVNCP 671

[Close]

BLAST of CmoCh17G001820 vs. ExPASy TrEMBL
Match: I6V4B3 (Sieve element occlusion protein 1 OS=Cucurbita maxima OX=3661 GN=SEO1 PE=2 SV=1)

HSP 1 Score: 907.9 bits (2345), Expect = 2.3e-260
Identity = 458/681 (67.25%), Postives = 525/681 (77.09%), Query Frame = 0


Query: 4   APGLLDPVQSSTFKEQMRKRHYNDYFVYGSINFKHLNDDSTKIDIPIPNYISAIESIITA 63
           AP LL    +ST KE++  +H++D  V G I  KH +DDSTKID  +P+YIS IE+IIT 
Sbjct: 12  APSLLHSKHASTHKEEVGTKHFSDELVTGHIYAKHRDDDSTKID--LPSYISVIENIITT 71

Query: 64  TNRITDTVHHRGSEG-------SLDVNVVIEPPLCILNHISSELWCNPPGIGSAHENTLT 123
            ++I DTV HRG++G       SL  NVVIEPPLC L+ ISSEL C  PGI  AHE TL 
Sbjct: 72  ADQIIDTV-HRGTDGRLVHSDASLAFNVVIEPPLCTLHRISSELSCKAPGIEKAHETTLE 131

Query: 124 IFEILANYPWEAKAALTLLAFATDYGDLWHPYPYSHTDPLAKSLAIIKRVGMLKKHLDSL 183
           IFEILANYPWEAKAALTL+AFA DYGDLWH + YSH DPLAKSLAIIKRV  LKKHLDSL
Sbjct: 132 IFEILANYPWEAKAALTLIAFAADYGDLWHLHHYSHADPLAKSLAIIKRVATLKKHLDSL 191

Query: 184 PYQQVLLNPNSLIQMCLQAIKRMNEIREFKKYYLNDPLELASALRQIPLVTYWVIHIIVA 243
            Y+QVLLNP SLIQ CLQAIK M+EIREF KY + +  EL +ALR IPLVTYWVIH IVA
Sbjct: 192 RYRQVLLNPKSLIQSCLQAIKYMDEIREFSKYDVKELSELPAALRLIPLVTYWVIHTIVA 251

Query: 244 SSIELSSYLTETKNQTQRYLNELSETIALVLARLEKHLDAIREQHEEVDLYRWLVDHIEH 303
           S IELSSYL+ET+NQ QRYLN+LSE +A VL  LEKHL+ +REQHEEVDLYRWLVDHIEH
Sbjct: 252 SRIELSSYLSETENQPQRYLNDLSEKMARVLDVLEKHLETLREQHEEVDLYRWLVDHIEH 311

Query: 304 FHTNIALVVSKLLSGKPETNPIIDGSTQKEVGVHESLSGKNVVLLISRLDISEDDIKAIH 363
           + T+I LVV KLLSGK ET P+IDGST +EVG+HESLSGKNV+L+IS LDISEDDIKAIH
Sbjct: 312 YRTDITLVVPKLLSGKTETKPLIDGSTLREVGIHESLSGKNVILVISGLDISEDDIKAIH 371

Query: 364 NIYDELKTRDTNYEIVWIPIIPEPYHEDDRKRYEYLRSTMKWYSIQFTTRISGMRYIEEE 423
           N+YDELK+R TNYEIVWIPII E  HEDD K+YEYLRSTMKWYSIQFTT+ISGMRY+EE+
Sbjct: 372 NVYDELKSRGTNYEIVWIPIILESNHEDDHKKYEYLRSTMKWYSIQFTTKISGMRYLEEK 431

Query: 424 WQFREDPLVV-------------------------------------------------- 483
           WQ REDPLVV                                                  
Sbjct: 432 WQLREDPLVVVLSPQSEVVFMNAIHLIRVWGTEAIDFKEDRAKFLLRKNWPDSTLVKFTH 491

Query: 484 -------IKSQKSIIFYGGRNPSWIQQFEEKVEILKNDPLILDGSSFEIVRIGKDAIGED 543
                  IK +KSI+FYGG+ P WIQQFEE+VEILK+DPLI DG SFEIVRIGK+A GED
Sbjct: 492 QPRLQSWIKQEKSILFYGGKEPMWIQQFEERVEILKSDPLIRDGGSFEIVRIGKNAKGED 551

Query: 544 DPKLMARFWKVQWGYFIVKSQIKGLSASETSEDILRLISYQNEDGWAVVTIGSAPLLVGS 603
           DP LMARFWK+QWGYFIVKSQ+ G SASET+EDILRLISYQNEDGW V+++GSAP+LVG 
Sbjct: 552 DPALMARFWKIQWGYFIVKSQLIGSSASETTEDILRLISYQNEDGWVVLSVGSAPVLVGR 611

Query: 604 GILILRLFDDFPKWKQNLHFKAFPNAFRDSFNELAMKTHECDRVIFPEFSGWIPMVVNCP 621
           GILIL+L ++FPKWKQ+L  KAFP+AFRD FNELA+K+H+CDRVI P FSG+IPM+VNCP
Sbjct: 612 GILILKLLEEFPKWKQSLRLKAFPDAFRDYFNELALKSHQCDRVILPGFSGYIPMIVNCP 671

[Close]

BLAST of CmoCh17G001820 vs. TAIR 10
Match: AT3G01680.1 (CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med28 (InterPro:IPR021640); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01670.1); Has 122 Blast hits to 112 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 122; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 127.9 bits (320), Expect = 2.9e-29
Identity = 97/343 (28.28%), Postives = 168/343 (48.98%), Query Frame = 0


Query: 110 AHENTLTIFEILANYPWEAKAALTLLAFATDYGDLWHPYPYSHTDPLAKSLAIIKRVGML 169
           +HE T+++FE L+++ W+ K  LTL AFA +YG+ W    +   + LAKSLA++K V + 
Sbjct: 127 SHEITMSVFEHLSSFQWDGKLVLTLAAFALNYGEFWLLVQFYSKNQLAKSLAMLKLVPVQ 186

Query: 170 KKHLDSLPYQQVLLNPNSLIQMCLQAIKRMNEIREFKKYYLN-DPLELASALRQIPLVTY 229
            +    +  + V    N LI+        + E+ E    Y+  D  +L+  L  IP+  Y
Sbjct: 187 NR----VTLESVSQGLNDLIREMKSVTACVVELSELPDRYITPDVPQLSRILSTIPIAVY 246

Query: 230 WVIHIIVA--SSIELSSYLTETKNQTQRYLNELSETIALVLARLEKHL-DAIR------E 289
           W I  ++A  S I + + +      TQ  L E S  +A  L  +  HL + +R      E
Sbjct: 247 WTIRSVIACISQINMITAMGHEMMNTQMDLWETS-MLANKLKNIHDHLAETLRLCYRHIE 306

Query: 290 QHEEVDLYRWLVDHIEHFHTNIALVVSKLLSGKPETNPIIDGSTQKEVGVHESLSGKNVV 349
           +    +  + L    +  H +   +++ L+  KP   P+ DG T+++V + + L  K V+
Sbjct: 307 KQRSSESLKVLHSLFDTTHIDNMKILTALVHPKPHITPLQDGLTKRKVHL-DVLRRKTVL 366

Query: 350 LLISRLDISEDDIKAIHNIYDELKTR--------DTNYEIVWIPIIPEPYHEDDR----- 409
           LLIS L+I +D++     IY E +             YE+VW+P++ +P  + +R     
Sbjct: 367 LLISDLNILQDELSIFEQIYTESRRNLVGVDGKSHMPYEVVWVPVV-DPIEDFERSPILQ 426

Query: 410 KRYEYLRSTMKWYSIQFTTRISG--MRYIEEEWQFREDPLVVI 428
           K++E LR  M WYS+     I    + ++   W F   P++V+
Sbjct: 427 KKFEDLRDPMPWYSVDSPKLIERHVVEFMRGRWHFMNKPILVV 462

[Close]

BLAST of CmoCh17G001820 vs. TAIR 10
Match: AT3G01670.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01680.1); Has 121 Blast hits to 111 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 121; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 87.4 bits (215), Expect = 4.3e-17
Identity = 84/351 (23.93%), Postives = 163/351 (46.44%), Query Frame = 0


Query: 107 IGSAHENTLTIFEILANYPWEAKAALTLLAFATDYGDLWHPYPYSHTDPLAKSLAIIKRV 166
           + S +  T ++  +++ Y W+AK  L L A A  YG          T+ L KSLA+IK++
Sbjct: 231 LDSRNTTTFSVLSLVSKYRWDAKLVLVLSALAVKYGVFLLLAETHATNQLTKSLALIKQL 290

Query: 167 GMLKKHLDSLPYQQVLLNPNSLIQMCLQAIKRMNEIREFKKYYLNDPLELASALRQIPLV 226
             +    ++L   Q L     L+Q  +     + +I +    ++      A+    IP  
Sbjct: 291 PSIFSRQNAL--HQRLDKTRILMQDMVDLTTTIIDIYQLPPNHIT-----AAFTDHIPTA 350

Query: 227 TYWVIHIIVASSIELSSYLTETKNQTQRY-----LNELSETIALVLARLEKHLDAIREQH 286
            YW++  ++     +S      ++Q   +     ++E SE +  + A L +     +   
Sbjct: 351 VYWIVRCVLICVSHISGASGFKQDQIMSFMEVSEIHENSERLRKINAYLLEQFKKSKMTI 410

Query: 287 EEVDLYRWLVDHIEHFHTNIAL-VVSKLLSGKPETNPIIDGS--TQKEVGVHESLSGKNV 346
           EE  +     + I+ F T I + VV  LL      + +  G+  +++ VG++  L+ K+V
Sbjct: 411 EEGIIEEEYQELIQTFTTIIHVDVVPPLLRLLRPIDFLYHGAGVSKRRVGIN-VLTQKHV 470

Query: 347 VLLISRLDISEDDIKAIHNIYDELKTRDTNYEIVWIPIIPEPYHEDDRKRYEYLRSTMKW 406
           +LLIS L+  E ++  + ++Y E      ++EI+W+P + + + E D  ++E L   M+W
Sbjct: 471 LLLISDLENIEKELYILESLYTE--AWQQSFEILWVP-VQDFWTEADDAKFEALHMNMRW 530

Query: 407 YSIQFTTRI--SGMRYIEEEWQFREDPLVVIKSQKSIIFYGGRNPS-WIQQ 447
           Y +    ++  + +R++ E W F+  P++V    K  +      P  WI Q
Sbjct: 531 YVLGEPRKLRRAAIRFVREWWGFKNRPILVALDPKGQVMSTNAFPMVWIWQ 570

[Close]

BLAST of CmoCh17G001820 vs. TAIR 10
Match: AT1G67790.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01680.1); Has 208 Blast hits to 125 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 208; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 57.0 bits (136), Expect = 6.3e-08
Identity = 49/179 (27.37%), Postives = 80/179 (44.69%), Query Frame = 0


Query: 96  ISSELWCNPPGIGSAHENTLTIFEILANYPWEAKAALTLLAFATDYGDLWHPYPYSHTDP 155
           IS ++ C   G     + T+ +F++L  Y W+AKA L L   A  YG L  P   +  DP
Sbjct: 80  ISVQMLCPCTGENEIRKRTMVLFDLLKEYRWDAKAVLVLGVLAATYGGLLLPVHLAICDP 139

Query: 156 LAKSLAIIKRVGMLKKHLDSLPYQQVLLNP-----NSLIQMCLQAIKRMNEIRE--FKKY 215
           +A S+A           L+ LP ++    P     N LI+  +   K + +  +  FK+ 
Sbjct: 140 VAASIA----------KLNQLPIERTKFRPWLESLNLLIKAMVDVTKCIIKFEKIPFKQA 199

Query: 216 YLNDPLELASALRQIPLVTYWVIHIIVASSIELSSYLTETKNQTQRYLNELSETIALVL 268
            L++ + L   L  I L TY V    V S++     +   K   Q  + E+ + + L+L
Sbjct: 200 KLDNNI-LGETLSNIYLTTYRV----VKSALTCMQQIPYFKQTQQISITEVQDKVTLLL 243

The following BLAST results are available for this feature:

BLAST of CmoCh17G001820 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SS87	4.1e-28	28.28	Protein SIEVE ELEMENT OCCLUSION B OS=Arabidopsis thaliana OX=3702 GN=SEOB PE=1 S...	[more]
Q93XX2	6.1e-16	23.93	Protein SIEVE ELEMENT OCCLUSION A OS=Arabidopsis thaliana OX=3702 GN=SEOA PE=1 S...	[more]
Q9FXE2	9.7e-14	24.24	Protein SIEVE ELEMENT OCCLUSION C OS=Arabidopsis thaliana OX=3702 GN=SEOC PE=4 S...	[more]

BLAST of CmoCh17G001820 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H3S9	0.0e+00	91.58	protein SIEVE ELEMENT OCCLUSION B-like OS=Cucurbita moschata OX=3662 GN=LOC11146...	[more]
A0A6J1H6V1	6.3e-274	70.82	protein SIEVE ELEMENT OCCLUSION B-like OS=Cucurbita moschata OX=3662 GN=LOC11146...	[more]
A0A6J1L2X0	1.8e-268	69.79	protein SIEVE ELEMENT OCCLUSION B-like OS=Cucurbita maxima OX=3661 GN=LOC1114993...	[more]
A0A6J1L5P1	2.9e-263	67.55	protein SIEVE ELEMENT OCCLUSION B-like OS=Cucurbita maxima OX=3661 GN=LOC1114993...	[more]
I6V4B3	2.3e-260	67.25	Sieve element occlusion protein 1 OS=Cucurbita maxima OX=3661 GN=SEO1 PE=2 SV=1	[more]

BLAST of CmoCh17G001820 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G01680.1	2.9e-29	28.28	CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med28 (InterPro:IPR021640);...	[more]
AT3G01670.1	4.3e-17	23.93	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G67790.1	6.3e-08	27.37	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027944	Sieve element occlusion, C-terminal	PFAM	PF14577	SEO_C	coord: 426..615 e-value: 8.5E-24 score: 84.2
IPR027942	Sieve element occlusion, N-terminal	PFAM	PF14576	SEO_N	coord: 55..295 e-value: 2.7E-42 score: 144.9
IPR039299	Protein SIEVE ELEMENT OCCLUSION	PANTHER	PTHR33232	PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE	coord: 427..573 coord: 33..428
None	No IPR available	PANTHER	PTHR33232:SF18	SIEVE ELEMENT OCCLUSION-RELATED	coord: 427..573 coord: 33..428

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh17G001820.1	CmoCh17G001820.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010088	phloem development
cellular_component	GO:0016021	integral component of membrane