CmoCh17G001680 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh17G001680
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	CASP-like protein
Location	Cmo_Chr17: 990021 .. 992371 (-)
RNA-Seq Expression	CmoCh17G001680
Synteny	CmoCh17G001680

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTTTTATACCATTATTTTAAAGAATTCCCTTCAATTTGTTCTTCCATTCCAAATTGACAACACCCCACCAAAACCCAGGGGATATGGTGGACCAATCAACGCGTGCCGCCGAACATCGCCATTTAGGGCTTTTCATTTGTCGTTTTTACTTTCCTTCTACTTTTCTATCTCCCCATTTCCGTTCTTCAAAGATCAGTGGCACCCAGGATTGATAATCGCTTCAAAACCCATAAGCCAGAAGCCATCAACATCCGCATTACTCTGTTTTCTGGCGTTGATTGAACGATCTGTTTAGATTTTGCTGATTAGGGTTTCTGGGTGTTGATTTGGGGCATGATTTTGTGAAAATGGTGGGGTTTTGAGGGTATTCTGTGGATTGTGGATGAAGAATTGGAGGAAAACATGTTGGATTTTGCTGGGACTCCAGGGACATTGACTGGGCTTGTGTTGAGGGTTTTGCAATGTGCTTTTGCTGCTGGGGCTGTTGCTTCCATGGCTACCTCTGTTGGCTTCTATAACTTCACTGCTTTTTGGTATTTATTGATTCTTCCCCCTTATCTTCTTTTGGCTTGATTAGTATTCATTTTGCATTGTATTTAGTGAATGCTGCTGCTCTGTTTAATTCTTTCCTTTTAGTACTGATTTGGCTGCTTTTGGTTATGGCTTTTGGTTGCTGCTTTGTAAGTTTGAAGATAACTATAAGTTGAATAGAGCACTCCATTTGAGCTCTCCTATGGCAGCTCTTGCCATGAACTCTCCTCACGATAGTTGGAGAGGGGAATGAAGCACTCTTTGTAAGAGTGCTGAAACCTCTTCCTAGTAGATACGTTATAAAAACCTTGAGGCTAATGACAATACGTAATGGACCAAAATGGACAATATCTGTTAGGGATAGGCTTGGGTTGTTACAAATGGTATCAAAGCTAGACACTAACGTTGTGGTAGCGAGGATGCTGGCCCCTAAGAGGGGTGGATTGTGAGATCCCACATTGGTTGGAGAGGGTAACAAAGCACTCTTTATAAGGGTGTGGAACATCTCCCTAGTAGGCACGTTTTAATAAACGTGAAAGTGGACAATATCTCTTAGCGGTAGGTTTGGGCTGTTACAAATGATATTAGAGCCAGACATTGGGCAGTGTGTCAACGAGAATGCTGGCTCCCAAGGAGATGAATTGTGAGATCCCACATTGATTGGAGAGGGGAACGAAGCACCCCTTGTAATGGTGTGGAAACCTCTCCCTAGTATATGCTTTTTAAAAACCGTGAGGTTGACGGTGATACGTAACGGGCCAAAGCGGACAATATCTGTTAGCAAGTAAGCTTGGGCTGTTATAAATGCTATCAAAGCCAGACATTGGACGGTGTGCTAGCGAGAACGCAAAGGGAGTGGATCATGAGATCCCACATTGGTTGGAGAGAGGAACGAAGCACTCCTTATAAGGGTGTGGAAACGTCTCCCTAGTAGACGCGTTTTAAAAACCAAGAGGCTGACGGCGATACATAACGGGCTAAAGCGGACGATATCTGTTAGTGTTAGGCTTGGGCTGTTACAAATGGTATCAGAGCCAGACACCGGGTGGTATGCTAGTGAGGATGTTGGCCTCCAAGGAGGGGTGGATTGTGAGATCCCACATCGGTTGGAGTGGGGAACAAAACACTCCTTACAATTGTGTGAAAACCTCTCCCTAGTAGACGCGTTTTAAAACCGTGAAGTAGACAGTAACAGGCCAAAGTGGATTGGGTTTGGACCGTTACACTATCTTCTTCATTTCCACTCATAAAACAGTCATTGAGAAATCAGTGAAAATAGTTATAGAAGAAACTGTGAGATGCCCTCTGATACCATACGAGCTCTGAATTTTATGTAAAGTTATCAAATTTGAGATGATATACGACACGAATTAAACTCCGAGTTTGTGCTTGAATCATGATTTTCAGCTACGTGATCGCGTCGATGGGCCTGCAACTGACATGGAGTTTTATGCTGGCATTGTTAGATGCATATGCTTTGTTAAGGAAGAAGATGCTTCACAATCCTATTCTAGTCAGCCTCTTTGTAGTTGGGGATTGGGTGAGACACTAAAACACCTACAAAACTCTGAGTTGTTTTAGATTATAGGGAAGTTCAAGCATTTATCCAGTTCTTGGTTTTCAGGTGACAGCAACATTGTCTCTAGCTGCAGCTTCCGCCTCGGGCGGGGTAGCTGTATTGTTCTTCAGTGACTTAGGACGCTGCAGTTTTGGCGACGAATGTCGAAACTTCCAAATCTCTGTCGTTTTAGCCTTCCTAAGCTGGATAACCATAGCCATTTCAGCTCTGATTATGCTCTGGATATTGGCTGCAGTTTGA

mRNA sequence

TCTTTTATACCATTATTTTAAAGAATTCCCTTCAATTTGTTCTTCCATTCCAAATTGACAACACCCCACCAAAACCCAGGGGATATGGTGGACCAATCAACGCGTGCCGCCGAACATCGCCATTTAGGGCTTTTCATTTGTCGTTTTTACTTTCCTTCTACTTTTCTATCTCCCCATTTCCGTTCTTCAAAGATCAGTGGCACCCAGGATTGATAATCGCTTCAAAACCCATAAGCCAGAAGCCATCAACATCCGCATTACTCTGTTTTCTGGCGTTGATTGAACGATCTGTTTAGATTTTGCTGATTAGGGTTTCTGGGTGTTGATTTGGGGCATGATTTTGTGAAAATGGTGGGGTTTTGAGGGTATTCTGTGGATTGTGGATGAAGAATTGGAGGAAAACATGTTGGATTTTGCTGGGACTCCAGGGACATTGACTGGGCTTGTGTTGAGGGTTTTGCAATGTGCTTTTGCTGCTGGGGCTGTTGCTTCCATGGCTACCTCTGTTGGCTTCTATAACTTCACTGCTTTTTGCTACGTGATCGCGTCGATGGGCCTGCAACTGACATGGAGTTTTATGCTGGCATTGTTAGATGCATATGCTTTGTTAAGGAAGAAGATGCTTCACAATCCTATTCTAGTCAGCCTCTTTGTAGTTGGGGATTGGGTGACAGCAACATTGTCTCTAGCTGCAGCTTCCGCCTCGGGCGGGGTAGCTGTATTGTTCTTCAGTGACTTAGGACGCTGCAGTTTTGGCGACGAATGTCGAAACTTCCAAATCTCTGTCGTTTTAGCCTTCCTAAGCTGGATAACCATAGCCATTTCAGCTCTGATTATGCTCTGGATATTGGCTGCAGTTTGA

Coding sequence (CDS)

ATGTTGGATTTTGCTGGGACTCCAGGGACATTGACTGGGCTTGTGTTGAGGGTTTTGCAATGTGCTTTTGCTGCTGGGGCTGTTGCTTCCATGGCTACCTCTGTTGGCTTCTATAACTTCACTGCTTTTTGCTACGTGATCGCGTCGATGGGCCTGCAACTGACATGGAGTTTTATGCTGGCATTGTTAGATGCATATGCTTTGTTAAGGAAGAAGATGCTTCACAATCCTATTCTAGTCAGCCTCTTTGTAGTTGGGGATTGGGTGACAGCAACATTGTCTCTAGCTGCAGCTTCCGCCTCGGGCGGGGTAGCTGTATTGTTCTTCAGTGACTTAGGACGCTGCAGTTTTGGCGACGAATGTCGAAACTTCCAAATCTCTGTCGTTTTAGCCTTCCTAAGCTGGATAACCATAGCCATTTCAGCTCTGATTATGCTCTGGATATTGGCTGCAGTTTGA

Protein sequence

MLDFAGTPGTLTGLVLRVLQCAFAAGAVASMATSVGFYNFTAFCYVIASMGLQLTWSFMLALLDAYALLRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSDLGRCSFGDECRNFQISVVLAFLSWITIAISALIMLWILAAV

Homology

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BLAST of CmoCh17G001680 vs. ExPASy Swiss-Prot
Match: Q8L7R5 (CASP-like protein 5B3 OS=Arabidopsis thaliana OX=3702 GN=At3g23200 PE=2 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 6.0e-50
Identity = 101/151 (66.89%), Postives = 126/151 (83.44%), Query Frame = 0


Query: 1   MLDFAGTPGTLTGLVLRVLQCAFAAGAVASMATSVGFYNFTAFCYVIASMGLQLTWSFML 60
           M+D  GTPGTLTGLVLR+ QC FAAG+++ M TS GF++FTAFCY+IA+MGLQ+ WSF L
Sbjct: 1   MIDIPGTPGTLTGLVLRISQCVFAAGSISYMVTSGGFFSFTAFCYLIAAMGLQVIWSFGL 60

Query: 61  ALLDAYALLRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSDLGRCSFGDE 120
           A+LD +AL+RKK L +P+LVSLFVVGDWVT+TLSLA AS+S G+ VL+F DLG CSF  E
Sbjct: 61  AILDTFALVRKKTLLSPVLVSLFVVGDWVTSTLSLAGASSSAGITVLYFGDLGSCSFEAE 120

Query: 121 CRNFQISVVLAFLSWITIAISALIMLWILAA 152
           C  +Q+SV LAFL WITIA+S+L  LW+LA+
Sbjct: 121 CWKYQLSVALAFLCWITIAVSSLTTLWLLAS 151

[Close]

BLAST of CmoCh17G001680 vs. ExPASy Swiss-Prot
Match: B8BD96 (CASP-like protein 5B3 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_30532 PE=3 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 3.6e-39
Identity = 89/154 (57.79%), Postives = 114/154 (74.03%), Query Frame = 0


Query: 1   MLDFAGTPGTLTGLVLRVLQCAFAAGAVASMATSVGFYNFTAFCYVIASMGLQLTWSFML 60
           M D  G+PGT +G+ LRV QC FA  +V +MA++ GF N+TAFCY+IASMGLQL WSF L
Sbjct: 1   MKDVVGSPGTWSGMSLRVSQCVFAGASVVAMASAYGFSNYTAFCYLIASMGLQLLWSFGL 60

Query: 61  ALLDAYALLRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSDLGRCSFGDE 120
           A LD Y+L  K+ LHNP+LVSLFVVGDWVTA LS AAASAS GV +LF  D+  C    +
Sbjct: 61  ACLDIYSLQTKRDLHNPVLVSLFVVGDWVTAILSFAAASASAGVTILFERDVHFCRMYPQ 120

Query: 121 --CRNFQISVVLAFLSWITIAISALIMLWILAAV 153
             C  +++SV+LAF++W  IA SA+ M W+LA++
Sbjct: 121 LSCGRYELSVILAFITWSFIATSAVSMFWLLASL 154

[Close]

BLAST of CmoCh17G001680 vs. ExPASy Swiss-Prot
Match: Q6K478 (CASP-like protein 5B3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os09g0249400 PE=2 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 3.6e-39
Identity = 89/154 (57.79%), Postives = 114/154 (74.03%), Query Frame = 0


Query: 1   MLDFAGTPGTLTGLVLRVLQCAFAAGAVASMATSVGFYNFTAFCYVIASMGLQLTWSFML 60
           M D  G+PGT +G+ LRV QC FA  +V +MA++ GF N+TAFCY+IASMGLQL WSF L
Sbjct: 1   MKDVVGSPGTWSGMSLRVSQCVFAGASVVAMASAYGFSNYTAFCYLIASMGLQLLWSFGL 60

Query: 61  ALLDAYALLRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSDLGRCSFGDE 120
           A LD Y+L  K+ LHNP+LVSLFVVGDWVTA LS AAASAS GV +LF  D+  C    +
Sbjct: 61  ACLDIYSLQTKRDLHNPVLVSLFVVGDWVTAILSFAAASASAGVTILFERDVHFCRMYPQ 120

Query: 121 --CRNFQISVVLAFLSWITIAISALIMLWILAAV 153
             C  +++SV+LAF++W  IA SA+ M W+LA++
Sbjct: 121 LSCGRYELSVILAFITWSFIATSAVSMFWLLASL 154

[Close]

BLAST of CmoCh17G001680 vs. ExPASy Swiss-Prot
Match: B6T990 (CASP-like protein 5B3 OS=Zea mays OX=4577 PE=2 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 1.5e-37
Identity = 87/154 (56.49%), Postives = 111/154 (72.08%), Query Frame = 0


Query: 1   MLDFAGTPGTLTGLVLRVLQCAFAAGAVASMATSVGFYNFTAFCYVIASMGLQLTWSFML 60
           M D  G+PGT +G+ LR+ QC  A  ++ +MAT+ GF N+TAFCY+IASMGLQL WSF L
Sbjct: 1   MKDVVGSPGTWSGMALRLSQCVSAGASMGAMATAYGFSNYTAFCYLIASMGLQLLWSFGL 60

Query: 61  ALLDAYALLRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSDLGRCSFGDE 120
           A LD Y+L  K+ LHNP+LVSLFVVGDWVTA LS AAASAS GV +LF  D+  C    +
Sbjct: 61  ACLDVYSLKTKRDLHNPVLVSLFVVGDWVTAILSFAAASASAGVTILFERDVHFCRMYPQ 120

Query: 121 --CRNFQISVVLAFLSWITIAISALIMLWILAAV 153
             C  + +SVVLAF++W  IA SA+ M W+L ++
Sbjct: 121 LSCGRYALSVVLAFITWSFIATSAVSMFWLLPSL 154

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BLAST of CmoCh17G001680 vs. ExPASy Swiss-Prot
Match: P0DI71 (CASP-like protein 5B1 OS=Ginkgo biloba OX=3311 GN=gba_locus_13664 PE=3 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 2.4e-35
Identity = 83/151 (54.97%), Postives = 106/151 (70.20%), Query Frame = 0


Query: 1   MLDFAGTPGTLTGLVLRVLQCAFAAGAVASMATSVGFYNFTAFCYVIASMGLQLTWSFML 60
           M +  G PGT+ GL LRV Q  FAA A+  M T   F N+TAFCY++A+M LQ  WSFML
Sbjct: 28  MKELPGMPGTIGGLALRVGQFLFAAAAIVIMVTGDEFTNYTAFCYLVAAMSLQFLWSFML 87

Query: 61  ALLDAYALLRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSDLGRCSFGDE 120
           A+LD YALL K+ L N +L+SLFVVGDWVTATLSLAAA ++ GV VLF +DL  C     
Sbjct: 88  AILDTYALLIKRGLRNSVLLSLFVVGDWVTATLSLAAACSTAGVTVLFDNDLNYCG-QMH 147

Query: 121 CRNFQISVVLAFLSWITIAISALIMLWILAA 152
           C  +Q+S  +AFLSW+ I +S+L+  W+ A+
Sbjct: 148 CHRYQLSAAMAFLSWLLIGMSSLLTFWLWAS 177

[Close]

BLAST of CmoCh17G001680 vs. ExPASy TrEMBL
Match: A0A6J1H420 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111459952 PE=3 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 1.5e-72
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MLDFAGTPGTLTGLVLRVLQCAFAAGAVASMATSVGFYNFTAFCYVIASMGLQLTWSFML 60
           MLDFAGTPGTLTGLVLRVLQCAFAAGAVASMATSVGFYNFTAFCYVIASMGLQLTWSFML
Sbjct: 1   MLDFAGTPGTLTGLVLRVLQCAFAAGAVASMATSVGFYNFTAFCYVIASMGLQLTWSFML 60

Query: 61  ALLDAYALLRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSDLGRCSFGDE 120
           ALLDAYALLRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSDLGRCSFGDE
Sbjct: 61  ALLDAYALLRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSDLGRCSFGDE 120

Query: 121 CRNFQISVVLAFLSWITIAISALIMLWILAAV 153
           CRNFQISVVLAFLSWITIAISALIMLWILAAV
Sbjct: 121 CRNFQISVVLAFLSWITIAISALIMLWILAAV 152

[Close]

BLAST of CmoCh17G001680 vs. ExPASy TrEMBL
Match: A0A6J1KXH2 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111499096 PE=3 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 2.9e-71
Identity = 149/152 (98.03%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MLDFAGTPGTLTGLVLRVLQCAFAAGAVASMATSVGFYNFTAFCYVIASMGLQLTWSFML 60
           MLDFAGTPGTLTGLVLR+LQCAFAAGAVASMATSVGFYNFTAFCYVIASMGLQLTWSFML
Sbjct: 1   MLDFAGTPGTLTGLVLRLLQCAFAAGAVASMATSVGFYNFTAFCYVIASMGLQLTWSFML 60

Query: 61  ALLDAYALLRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSDLGRCSFGDE 120
           ALLDAYALLRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSDLGRCSFG+E
Sbjct: 61  ALLDAYALLRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSDLGRCSFGNE 120

Query: 121 CRNFQISVVLAFLSWITIAISALIMLWILAAV 153
           CRNFQISVVLAFLSWITIAIS+LIMLWILAAV
Sbjct: 121 CRNFQISVVLAFLSWITIAISSLIMLWILAAV 152

[Close]

BLAST of CmoCh17G001680 vs. ExPASy TrEMBL
Match: A0A6J1KMZ0 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111494799 PE=3 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 5.6e-67
Identity = 140/151 (92.72%), Postives = 145/151 (96.03%), Query Frame = 0


Query: 1   MLDFAGTPGTLTGLVLRVLQCAFAAGAVASMATSVGFYNFTAFCYVIASMGLQLTWSFML 60
           MLDF GTPGTLT  VLR+LQC FAAG+VASMAT+VGFYNFTAFCYVIASMGLQ+TWSFML
Sbjct: 1   MLDFPGTPGTLTAFVLRILQCVFAAGSVASMATAVGFYNFTAFCYVIASMGLQVTWSFML 60

Query: 61  ALLDAYALLRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSDLGRCSFGDE 120
           ALLDAYALLRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFS+LG CSFGDE
Sbjct: 61  ALLDAYALLRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSNLGHCSFGDE 120

Query: 121 CRNFQISVVLAFLSWITIAISALIMLWILAA 152
           CR FQISVVLAFLSWITIAISALIMLWILAA
Sbjct: 121 CRKFQISVVLAFLSWITIAISALIMLWILAA 151

[Close]

BLAST of CmoCh17G001680 vs. ExPASy TrEMBL
Match: A0A6J1EV36 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111436867 PE=3 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 5.6e-67
Identity = 140/151 (92.72%), Postives = 145/151 (96.03%), Query Frame = 0


Query: 1   MLDFAGTPGTLTGLVLRVLQCAFAAGAVASMATSVGFYNFTAFCYVIASMGLQLTWSFML 60
           MLDF GTPGTLT  VLR+LQC FAAG+VASMAT+VGFYNFTAFCYVIASMGLQ+TWSFML
Sbjct: 1   MLDFPGTPGTLTAFVLRILQCVFAAGSVASMATAVGFYNFTAFCYVIASMGLQVTWSFML 60

Query: 61  ALLDAYALLRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSDLGRCSFGDE 120
           ALLDAYALLRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFS+LG CSFGDE
Sbjct: 61  ALLDAYALLRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSNLGHCSFGDE 120

Query: 121 CRNFQISVVLAFLSWITIAISALIMLWILAA 152
           CR FQISVVLAFLSWITIAISALIMLWILAA
Sbjct: 121 CRKFQISVVLAFLSWITIAISALIMLWILAA 151

[Close]

BLAST of CmoCh17G001680 vs. ExPASy TrEMBL
Match: A0A6J1CCY5 (CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111009600 PE=3 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 1.6e-66
Identity = 139/151 (92.05%), Postives = 144/151 (95.36%), Query Frame = 0


Query: 1   MLDFAGTPGTLTGLVLRVLQCAFAAGAVASMATSVGFYNFTAFCYVIASMGLQLTWSFML 60
           MLDFAGTPGTLTG VLR+LQC  A G+VASMAT+ GFYNFTAFCYVIASMGLQ+TWSFML
Sbjct: 1   MLDFAGTPGTLTGFVLRILQCVLAVGSVASMATASGFYNFTAFCYVIASMGLQVTWSFML 60

Query: 61  ALLDAYALLRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSDLGRCSFGDE 120
           ALLDAYAL RKK+LHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSDLGRCSFGDE
Sbjct: 61  ALLDAYALARKKVLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSDLGRCSFGDE 120

Query: 121 CRNFQISVVLAFLSWITIAISALIMLWILAA 152
           CR FQISVVLAFLSWITIAISALIMLWILAA
Sbjct: 121 CRKFQISVVLAFLSWITIAISALIMLWILAA 151

[Close]

BLAST of CmoCh17G001680 vs. TAIR 10
Match: AT3G23200.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 198.4 bits (503), Expect = 4.3e-51
Identity = 101/151 (66.89%), Postives = 126/151 (83.44%), Query Frame = 0


Query: 1   MLDFAGTPGTLTGLVLRVLQCAFAAGAVASMATSVGFYNFTAFCYVIASMGLQLTWSFML 60
           M+D  GTPGTLTGLVLR+ QC FAAG+++ M TS GF++FTAFCY+IA+MGLQ+ WSF L
Sbjct: 1   MIDIPGTPGTLTGLVLRISQCVFAAGSISYMVTSGGFFSFTAFCYLIAAMGLQVIWSFGL 60

Query: 61  ALLDAYALLRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSDLGRCSFGDE 120
           A+LD +AL+RKK L +P+LVSLFVVGDWVT+TLSLA AS+S G+ VL+F DLG CSF  E
Sbjct: 61  AILDTFALVRKKTLLSPVLVSLFVVGDWVTSTLSLAGASSSAGITVLYFGDLGSCSFEAE 120

Query: 121 CRNFQISVVLAFLSWITIAISALIMLWILAA 152
           C  +Q+SV LAFL WITIA+S+L  LW+LA+
Sbjct: 121 CWKYQLSVALAFLCWITIAVSSLTTLWLLAS 151

[Close]

BLAST of CmoCh17G001680 vs. TAIR 10
Match: AT3G53850.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 147.1 bits (370), Expect = 1.1e-35
Identity = 85/154 (55.19%), Postives = 109/154 (70.78%), Query Frame = 0


Query: 1   MLDFAGTPGTLTGLVLRVLQCAFAAGAVASMATSVGFYNFTAFCYVIASMGLQLTWSFML 60
           M    G PGT+ GL+LR+ QCA AA ++  M ++  F   TAFCY+IASMGLQL WSF L
Sbjct: 1   MKKLLGGPGTVCGLLLRIGQCASAAASIGVMVSAKEFSVHTAFCYLIASMGLQLLWSFGL 60

Query: 61  ALLDAYALLRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSDLGRCSFGDE 120
           A LD YAL  KK L NPILVSLFVVGDWVTA LSLAAA +S GV VL+  D+  C+   +
Sbjct: 61  ACLDVYALRGKKDLQNPILVSLFVVGDWVTAMLSLAAACSSAGVVVLYEKDIKYCNTQSQ 120

Query: 121 --CRNFQISVVLAFLSWITIAISALIMLWILAAV 153
             C  ++++V L+F++WI IA+S+ +  WILA+V
Sbjct: 121 YPCLRYEVAVALSFVTWIQIAVSSHVTFWILASV 154

[Close]

BLAST of CmoCh17G001680 vs. TAIR 10
Match: AT5G02060.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 143.7 bits (361), Expect = 1.2e-34
Identity = 83/151 (54.97%), Postives = 103/151 (68.21%), Query Frame = 0


Query: 1   MLDFAGTPGTLTGLVLRVLQCAFAAGAVASMATSVGFYNFTAFCYVIASMGLQLTWSFML 60
           M    G+PGT++GL+LR+ QCA AA ++  M +S  F N+TAFC+++ASMGLQL WSF L
Sbjct: 1   MKKMIGSPGTMSGLILRLGQCATAAASIGVMVSSYDFSNYTAFCFLVASMGLQLIWSFGL 60

Query: 61  ALLDAYALLRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSDLGRCSFGD- 120
           A LD YA+ RK  L +PIL+SLF VGDWVTA L+LAAA +S GV VLF  D   C     
Sbjct: 61  ACLDVYAIRRKSDLRSPILLSLFTVGDWVTALLALAAACSSAGVTVLFTKDTEFCRQQPA 120

Query: 121 -ECRNFQISVVLAFLSWITIAISALIMLWIL 150
             C  FQISV L+F +W   AIS+  M WIL
Sbjct: 121 LSCDRFQISVGLSFFNWFLAAISSHTMFWIL 151

[Close]

BLAST of CmoCh17G001680 vs. TAIR 10
Match: AT2G28370.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 122.1 bits (305), Expect = 3.9e-28
Identity = 73/151 (48.34%), Postives = 95/151 (62.91%), Query Frame = 0


Query: 1   MLDFAGTPGTLTGLVLRVLQCAFAAGAVASMATSVGFYNFTAFCYVIASMGLQLTWSFML 60
           M D  G PGTL GL LR  Q  FAA A+  MA++  F + TAFCY++A+ GLQ  WS  L
Sbjct: 29  MDDMEGMPGTLLGLALRFFQFLFAAAALCVMASTSDFPSVTAFCYLVAATGLQSLWSLAL 88

Query: 61  ALLDAYALLRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSDLGRCSFGDE 120
           A++D YA++ K+ L N  LVSLF +GD VT+TL+ AAA AS G+ VL  +DL  C+  + 
Sbjct: 89  AMVDVYAIMVKRSLQNRRLVSLFAIGDGVTSTLTFAAACASAGITVLIDNDLNSCA-QNH 148

Query: 121 CRNFQISVVLAFLSWITIAISALIMLWILAA 152
           C  F+ S  LAF+SW     S L   W LA+
Sbjct: 149 CVQFETSTALAFISWFAALPSFLFNFWSLAS 178

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BLAST of CmoCh17G001680 vs. TAIR 10
Match: AT2G37200.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 106.3 bits (264), Expect = 2.2e-23
Identity = 64/150 (42.67%), Postives = 95/150 (63.33%), Query Frame = 0


Query: 1   MLDFAGTPGTLTGLVLRVLQCAFAAGAVASMATSVGFYNFTAFCYVIASMGLQLTWSFML 60
           M D  G PGT  GL+LR+ Q   A  +V+ M T+  F + TAFC ++ ++ LQ  WS  L
Sbjct: 31  MKDVQGMPGTTGGLILRLSQFVPALISVSVMVTTSDFRSATAFCCLVLAVSLQSLWSLSL 90

Query: 61  ALLDAYALLRKKMLHNPILVSLFVVGDWVTATLSLAAASASGGVAVLFFSDLGRCSFGDE 120
            ++DAYALL ++ L N  +V  F +GD VT+TL+ AAASAS G+ VL  +DLG+C+  + 
Sbjct: 91  FIIDAYALLVRRSLRNHSVVQCFTIGDGVTSTLTFAAASASAGITVL-INDLGQCNV-NH 150

Query: 121 CRNFQISVVLAFLSWITIAISALIMLWILA 151
           C  F+ +  +AF+SW  ++ S ++  W LA
Sbjct: 151 CTRFETATAMAFISWFAVSPSFILNFWSLA 178

The following BLAST results are available for this feature:

BLAST of CmoCh17G001680 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L7R5	6.0e-50	66.89	CASP-like protein 5B3 OS=Arabidopsis thaliana OX=3702 GN=At3g23200 PE=2 SV=1	[more]
B8BD96	3.6e-39	57.79	CASP-like protein 5B3 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_30532 PE=3 S...	[more]
Q6K478	3.6e-39	57.79	CASP-like protein 5B3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os09g0249400 P...	[more]
B6T990	1.5e-37	56.49	CASP-like protein 5B3 OS=Zea mays OX=4577 PE=2 SV=1	[more]
P0DI71	2.4e-35	54.97	CASP-like protein 5B1 OS=Ginkgo biloba OX=3311 GN=gba_locus_13664 PE=3 SV=1	[more]

BLAST of CmoCh17G001680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H420	1.5e-72	100.00	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111459952 PE=3 SV=1	[more]
A0A6J1KXH2	2.9e-71	98.03	CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111499096 PE=3 SV=1	[more]
A0A6J1KMZ0	5.6e-67	92.72	CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111494799 PE=3 SV=1	[more]
A0A6J1EV36	5.6e-67	92.72	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111436867 PE=3 SV=1	[more]
A0A6J1CCY5	1.6e-66	92.05	CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111009600 PE=3 SV=1	[more]

BLAST of CmoCh17G001680 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G23200.1	4.3e-51	66.89	Uncharacterised protein family (UPF0497)	[more]
AT3G53850.1	1.1e-35	55.19	Uncharacterised protein family (UPF0497)	[more]
AT5G02060.1	1.2e-34	54.97	Uncharacterised protein family (UPF0497)	[more]
AT2G28370.1	3.9e-28	48.34	Uncharacterised protein family (UPF0497)	[more]
AT2G37200.1	2.2e-23	42.67	Uncharacterised protein family (UPF0497)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 8..136 e-value: 1.1E-24 score: 87.0
IPR045009	CASP-like protein 5	PANTHER	PTHR32021	CASP-LIKE PROTEIN 5B3	coord: 1..151
None	No IPR available	PANTHER	PTHR32021:SF5	CASP-LIKE PROTEIN 5B3	coord: 1..151

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh17G001680.1	CmoCh17G001680.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane