CmoCh17G001600 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCGATTCAGTTTTTGTTTCTGGATTTCGTATGGGGCAGCAACCTTCCAAAGATGAGCTTGTGTACCAGCGCGCCAGCAATGGCGATGTGGATGGGATTAAAGCCCTTTCTAACGATGGTGCCGGCCTTGAGGTGATTGGAATTCGTAATTTGTTTATTTATTGATCTCTATTCTTTTGTAGTTTTGTATTCTCGTGGATCATTTTTGGTTTATTTTGGGTTATTGCTGTAGTGGGTTGATAGGGAAGGAAGGACTCCGTTGATTGTTGCCTGTACGAAACCCGAGCCCTACAACGTGGCGAAAACGTTGCTAGAACTTGGCGCCAATGTCAATGCGTTTGGACCAGGTTTGCTATGAACATTTCGGGTTTCCATGGTTTGATTTGGCCGATTAATTGATGTATCAGATTTTCATATACGTTTATTTCAATTTCTGTGACATAATTGGTTATTTTATTGCAAAGTATCCAATGGATTTAATATTTTATCATTTCGTAGCAGTTTGTTTTTGGAAGATTGGGTTGTAATTGTTTATTCTTTTGTCACGCTTTGAGAGCTGGATTTATGTTATTTTAGGCCGTCATGGTGGAACGCCATTGCACCATGCTGCTAAAAGAGGCTTGGAAAACACTGTTAGATTGCTTCTTTCATACAGAGGTTTGTTTGTTTTTGTTACTCGAAATATTATAACTTGTTCTGCATCCTGCCAATATCGGATAATTCATTTAACCTCCATTTTTGCTGTAATATTGCTTATTTTTGTTCCAATTTCCAGCAAATACTTCGATAATCAATGATGCTTGCCAAACTCCTTTGGAAGTTGCGCGAGCAGCGGGGCACAAAAATGTTGTTCGTGCCATTGAGGTACTCTATCTTGTATATATTTTTTAAATTCTCCCCACATTTAGGCTTGGATATTAATTTGATTCATACCCACATGTAAATTCTTAATATCAATTGGAGAGAAAATGACAATAGAGAAGTAGGATTTTCTATTCTAATACTATGTCACATTTTCATTAAGGTTGAACGCTTAAACTAATAGGTTTATGTATGTTCTTAACATACAAATGACCTCTTAATATGTCAATTTGAGCATATATCAATTGATTAAGATATATGCTCCCGAGATCAGGGGTTCTAGTCTACCCACTCTACATTTGGTTGAACTCTGAAAAAAAAGGAAAATGTTCTTTAAAATGTTGAAGCATCTTTAAACTACACAATGAAACTTCATTTTCATACTATTTTCTGTCCTCAGAAGATGTTTCTAATGATGTTTTGTAGAATCATATTTGTTTATTCTCTGGTTGGATGCGGGAATTTTATGGGCCGGAGTTTCTCGAAGTACTTGTTCCTCATCTCCTTTCGAGAAAAGTGTGAGTACTTTTTCCATATGATTTCGGTCATGTTTATCCCCTTTCCCCTCTTTCAATTGACATTGATACTCTGCATAGTATGTTAATCGTTGAAGGCATTAGGGAATCTTTGGCACTATCTTTTGATATTTATTAACCAAGTCTTTTGTCCAGCTTTTCTGTAAAGCCGTGAATAGTTTATCCTTACATAGTGCATGATATAGCTTGTACACTAACAATGCAATTTCTGCAGCTGGGTAGTCATTTTACCTTGTGGTTCTCGAAATCCTATGAAGCCTACTAAGTTGGAGCTTGCCTTGTACACTAGCTTGGAGGTATTGGTTTCTATACATGTCAGCTTTCATTTCCTTCATTTAAATTACGTTTCATTTAAATTACGTGTCAGATGTATTAATTGGATTTTTTATTGAATGGACAGGATGCCCAACCTCGTTTAATCATTCCATTGTGGAAGTCATGTTTAGAGGAACATAAGTTGCAGGATCCTGATCCCTCTGTGGTTATTGTCGACAACGCTCCAAGTAATTTCTAATTGCTGGAAAATGCTATTTCAGTAACAGTTATTGACTTCTTCAGTTAAATTTTATTTATTGTCCTTGGTTTTGCTCTCAGACTTAGTCTCAAGAGGAGTAAGGAGGCGAAAACGGAGTTGTCACACCTCCTGGGAAGCCAGATCTCGATTTCGAAAATCAAAGAGACGTAAGAACTAATAAGATCCTGTTCATATACTTGTGTTAAAAAATCAATTATTCACGTATTTCATGTTTGAAATTATATGAAACAGAAATTAGGGTCTTTCTAGTTTTGTGTTTAATGTGAAACGTCTTAGTCTATGCTCACTGTTTTACATCCTCCAAATTGATATGGTCGGGAGTGAATAGATCATTTTGGTCATGTTTAAATCACACTAAAATATGTCATTAATAATTAAAAATCAATTTAATGTTCTATTTTTTCACTTTGTTGCTTTTACAATTGAGATGTGGTAAGTAATTTTGTTTCATATCTGTGGTTTTTGCAGCTGGACGTCTTAGACTTGCACCTGATAATGAGTATGACAGACAACAACTTCAATGGTTTTGTGATGCTTGCAAAGGGATTCCTCAGCCAAAGGTATTATGCCTTTTCTTTCTTTATTTCTAGAAAGCGACTGAAACAGATCGATTAAAACATGTCGTCTCAAGCTTTCAGTTTCTCACATCCCCATCGTCGCGTTTCATGGGAAAGCTTAGCTTTACAGAAAGCTGTAACAGTCTAAGTTTACTGCTAGCAGAGATTGTCCTCTTTAAGTTTTTTTTGGGCTCCCCCTCAAGGTTTTGAAAACGCGTCTGTTAGGGAGAGGTTTCCACACCCTTGTAAAGAATGCTTTGTTCTCCTCCCCAACTAATGTGAGATCTAACAATCCACTTCCTTCGGGATTTAACCTCCTCGCTGACACTCGTTCTCAAAGAGGACAATATCTGCTAGCAGTGGACTTCGGTTGTTACAACTATCTTCAACAAATTCATTATCCAAACGGTTTTTTATATTAAAATAGAATACTCTAAAATCGAGTAGTTTTTTAACACCATTTCAAAGAGGTCTCGGCACTATATATAGTACATAGTCTCGATGATTTAGTACTCATTAGTGGAGGCACGAACTGCATATCTACATTTTCCTGTCTTTGAAGTAGTTTTCGCTCAGCCTGCAAGCCCAAGATATTGAATGTCTCTCTTTTGTGGGGCTGATCATAACATCAAGTACTGTTTTGAAATTTCAGATGATGCAATCTACAATGTGGCATAATCACCAGAGCCCGATCAACATTGCCACTGTACCTCCGGGTTCAGAAGATCCGGAGCTTACAATGGCCATAAATGCCTCTATTCAGTCAGCTATGCAGGAAAGTGGACAGCTTCATAATCCCCATTCATCAAGCTCTGAAGCAGGTGCCTCAAGTAGCAGTGCATTACCTCCACCTGCTCCTCCAAGGCCAGGCTCTAGCAAATCGACAATGCATGAAGAAGCAAGCCACTGTTACAATCCAAGCCATCGCGCTCAAGCGCCGATGAACACCAGCATCCAGATTACACACCCTCCAAATGCAGTCCCCACAGCTCCACCAGTTGAAGCCAAAACCTTCGAGGCTAGCACTAGTACGGTTGGCGACTACCCGTTGGTCGATTCCAATCCCACAGACAGCATGGCATCTTCATCCGTTGGGGACGATGGGAAACAAGGCAGTGGCAACACGACATGTGTAATATGTTTGGATGCACCAGTGGAGGGAGCCTGCGTCCCCTGTGGCCATATGGCTGGATGTATGTCTTGTTTAAGTGAGATCAAAGCCAAGAATTGGGGCTGCCCAGTTTGTCGCACCAAGATCAATCAAGTCATAAAGCTGTATGCTGTCTGAGGCACCCCAATCAACCAAGCATATAACCAGGTGAAACCCCTTGAACTCTGCCTGTATAATTTGCGCTATACATACCCTTCAGCTTTCAGATACTTAAATGTTTAAACTTATATAAATTCTTTCGACTGAAACAACCAGATTGGTACTTCTGCTAAAAGAAAAACTGGGGAGGTAAAACTACTGTGGGAGTATTTGGCTCATAAATTTGGACTTGTGTGTGTACATATTTCGTATATGAACTCTTCATTG TNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCGATTCAGTTTTTGTTTCTGGATTTCGTATGGGGCAGCAACCTTCCAAAGATGAGCTTGTGTACCAGCGCGCCAGCAATGGCGATGTGGATGGGATTAAAGCCCTTTCTAACGATGGTGCCGGCCTTGAGTGGGTTGATAGGGAAGGAAGGACTCCGTTGATTGTTGCCTGTACGAAACCCGAGCCCTACAACGTGGCGAAAACGTTGCTAGAACTTGGCGCCAATGTCAATGCGTTTGGACCAGGCCGTCATGGTGGAACGCCATTGCACCATGCTGCTAAAAGAGGCTTGGAAAACACTGTTAGATTGCTTCTTTCATACAGAGCAAATACTTCGATAATCAATGATGCTTGCCAAACTCCTTTGGAAGTTGCGCGAGCAGCGGGGCACAAAAATGTTGTTCGTGCCATTGAGAATCATATTTGTTTATTCTCTGGTTGGATGCGGGAATTTTATGGGCCGGAGTTTCTCGAAGTACTTGTTCCTCATCTCCTTTCGAGAAAAGTCTGGGTAGTCATTTTACCTTGTGGTTCTCGAAATCCTATGAAGCCTACTAAGTTGGAGCTTGCCTTGTACACTAGCTTGGAGGATGCCCAACCTCGTTTAATCATTCCATTGTGGAAGTCATGTTTAGAGGAACATAAGTTGCAGGATCCTGATCCCTCTGTGGTTATTGTCGACAACGCTCCAAACTTAGTCTCAAGAGGAGTAAGGAGGCGAAAACGGAGTTGTCACACCTCCTGGGAAGCCAGATCTCGATTTCGAAAATCAAAGAGACCTGGACGTCTTAGACTTGCACCTGATAATGAGTATGACAGACAACAACTTCAATGGTTTTGTGATGCTTGCAAAGGGATTCCTCAGCCAAAGATGATGCAATCTACAATGTGGCATAATCACCAGAGCCCGATCAACATTGCCACTGTACCTCCGGGTTCAGAAGATCCGGAGCTTACAATGGCCATAAATGCCTCTATTCAGTCAGCTATGCAGGAAAGTGGACAGCTTCATAATCCCCATTCATCAAGCTCTGAAGCAGGTGCCTCAAGTAGCAGTGCATTACCTCCACCTGCTCCTCCAAGGCCAGGCTCTAGCAAATCGACAATGCATGAAGAAGCAAGCCACTGTTACAATCCAAGCCATCGCGCTCAAGCGCCGATGAACACCAGCATCCAGATTACACACCCTCCAAATGCAGTCCCCACAGCTCCACCAGTTGAAGCCAAAACCTTCGAGGCTAGCACTAGTACGGTTGGCGACTACCCGTTGGTCGATTCCAATCCCACAGACAGCATGGCATCTTCATCCGTTGGGGACGATGGGAAACAAGGCAGTGGCAACACGACATGTGTAATATGTTTGGATGCACCAGTGGAGGGAGCCTGCGTCCCCTGTGGCCATATGGCTGGATGTATGTCTTGTTTAAGTGAGATCAAAGCCAAGAATTGGGGCTGCCCAGTTTGTCGCACCAAGATCAATCAAGTCATAAAGCTGTATGCTGTCTGAGGCACCCCAATCAACCAAGCATATAACCAGGTGAAACCCCTTGAACTCTGCCTGTATAATTTGCGCTATACATACCCTTCAGCTTTCAGATACTTAAATGTTTAAACTTATATAAATTCTTTCGACTGAAACAACCAGATTGGTACTTCTGCTAAAAGAAAAACTGGGGAGGTAAAACTACTGTGGGAGTATTTGGCTCATAAATTTGGACTTGTGTGTGTACATATTTCGTATATGAACTCTTCATTG ATGGGGCAGCAACCTTCCAAAGATGAGCTTGTGTACCAGCGCGCCAGCAATGGCGATGTGGATGGGATTAAAGCCCTTTCTAACGATGGTGCCGGCCTTGAGTGGGTTGATAGGGAAGGAAGGACTCCGTTGATTGTTGCCTGTACGAAACCCGAGCCCTACAACGTGGCGAAAACGTTGCTAGAACTTGGCGCCAATGTCAATGCGTTTGGACCAGGCCGTCATGGTGGAACGCCATTGCACCATGCTGCTAAAAGAGGCTTGGAAAACACTGTTAGATTGCTTCTTTCATACAGAGCAAATACTTCGATAATCAATGATGCTTGCCAAACTCCTTTGGAAGTTGCGCGAGCAGCGGGGCACAAAAATGTTGTTCGTGCCATTGAGAATCATATTTGTTTATTCTCTGGTTGGATGCGGGAATTTTATGGGCCGGAGTTTCTCGAAGTACTTGTTCCTCATCTCCTTTCGAGAAAAGTCTGGGTAGTCATTTTACCTTGTGGTTCTCGAAATCCTATGAAGCCTACTAAGTTGGAGCTTGCCTTGTACACTAGCTTGGAGGATGCCCAACCTCGTTTAATCATTCCATTGTGGAAGTCATGTTTAGAGGAACATAAGTTGCAGGATCCTGATCCCTCTGTGGTTATTGTCGACAACGCTCCAAACTTAGTCTCAAGAGGAGTAAGGAGGCGAAAACGGAGTTGTCACACCTCCTGGGAAGCCAGATCTCGATTTCGAAAATCAAAGAGACCTGGACGTCTTAGACTTGCACCTGATAATGAGTATGACAGACAACAACTTCAATGGTTTTGTGATGCTTGCAAAGGGATTCCTCAGCCAAAGATGATGCAATCTACAATGTGGCATAATCACCAGAGCCCGATCAACATTGCCACTGTACCTCCGGGTTCAGAAGATCCGGAGCTTACAATGGCCATAAATGCCTCTATTCAGTCAGCTATGCAGGAAAGTGGACAGCTTCATAATCCCCATTCATCAAGCTCTGAAGCAGGTGCCTCAAGTAGCAGTGCATTACCTCCACCTGCTCCTCCAAGGCCAGGCTCTAGCAAATCGACAATGCATGAAGAAGCAAGCCACTGTTACAATCCAAGCCATCGCGCTCAAGCGCCGATGAACACCAGCATCCAGATTACACACCCTCCAAATGCAGTCCCCACAGCTCCACCAGTTGAAGCCAAAACCTTCGAGGCTAGCACTAGTACGGTTGGCGACTACCCGTTGGTCGATTCCAATCCCACAGACAGCATGGCATCTTCATCCGTTGGGGACGATGGGAAACAAGGCAGTGGCAACACGACATGTGTAATATGTTTGGATGCACCAGTGGAGGGAGCCTGCGTCCCCTGTGGCCATATGGCTGGATGTATGTCTTGTTTAAGTGAGATCAAAGCCAAGAATTGGGGCTGCCCAGTTTGTCGCACCAAGATCAATCAAGTCATAAAGCTGTATGCTGTCTGA MGQQPSKDELVYQRASNGDVDGIKALSNDGAGLEWVDREGRTPLIVACTKPEPYNVAKTLLELGANVNAFGPGRHGGTPLHHAAKRGLENTVRLLLSYRANTSIINDACQTPLEVARAAGHKNVVRAIENHICLFSGWMREFYGPEFLEVLVPHLLSRKVWVVILPCGSRNPMKPTKLELALYTSLEDAQPRLIIPLWKSCLEEHKLQDPDPSVVIVDNAPNLVSRGVRRRKRSCHTSWEARSRFRKSKRPGRLRLAPDNEYDRQQLQWFCDACKGIPQPKMMQSTMWHNHQSPINIATVPPGSEDPELTMAINASIQSAMQESGQLHNPHSSSSEAGASSSSALPPPAPPRPGSSKSTMHEEASHCYNPSHRAQAPMNTSIQITHPPNAVPTAPPVEAKTFEASTSTVGDYPLVDSNPTDSMASSSVGDDGKQGSGNTTCVICLDAPVEGACVPCGHMAGCMSCLSEIKAKNWGCPVCRTKINQVIKLYAV Homology
BLAST of CmoCh17G001600 vs. ExPASy Swiss-Prot
Match: Q4FE47 (Putative E3 ubiquitin-protein ligase XBAT35 OS=Arabidopsis thaliana OX=3702 GN=XBAT35 PE=2 SV=1) HSP 1 Score: 469.5 bits (1207), Expect = 4.5e-131 Identity = 270/502 (53.78%), Postives = 334/502 (66.53%), Query Frame = 0
BLAST of CmoCh17G001600 vs. ExPASy Swiss-Prot
Match: Q7XI08 (Probable E3 ubiquitin-protein ligase XBOS34 OS=Oryza sativa subsp. japonica OX=39947 GN=XBOS34 PE=2 SV=1) HSP 1 Score: 391.3 bits (1004), Expect = 1.6e-107 Identity = 243/545 (44.59%), Postives = 306/545 (56.15%), Query Frame = 0
BLAST of CmoCh17G001600 vs. ExPASy Swiss-Prot
Match: Q9FPH0 (Putative E3 ubiquitin-protein ligase XBAT34 OS=Arabidopsis thaliana OX=3702 GN=XBAT34 PE=2 SV=1) HSP 1 Score: 350.9 bits (899), Expect = 2.3e-95 Identity = 210/494 (42.51%), Postives = 276/494 (55.87%), Query Frame = 0
BLAST of CmoCh17G001600 vs. ExPASy Swiss-Prot
Match: Q9SAR5 (Ankyrin repeat domain-containing protein 2A OS=Arabidopsis thaliana OX=3702 GN=AKR2A PE=1 SV=2) HSP 1 Score: 76.3 bits (186), Expect = 1.1e-12 Identity = 47/123 (38.21%), Postives = 70/123 (56.91%), Query Frame = 0
BLAST of CmoCh17G001600 vs. ExPASy Swiss-Prot
Match: Q29Q26 (Ankyrin repeat domain-containing protein 2B OS=Arabidopsis thaliana OX=3702 GN=AKR2B PE=1 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 1.1e-12 Identity = 48/123 (39.02%), Postives = 68/123 (55.28%), Query Frame = 0
BLAST of CmoCh17G001600 vs. ExPASy TrEMBL
Match: A0A6J1H4R2 (putative E3 ubiquitin-protein ligase XBAT34 OS=Cucurbita moschata OX=3662 GN=LOC111460381 PE=4 SV=1) HSP 1 Score: 1003.8 bits (2594), Expect = 2.5e-289 Identity = 492/492 (100.00%), Postives = 492/492 (100.00%), Query Frame = 0
BLAST of CmoCh17G001600 vs. ExPASy TrEMBL
Match: A0A6J1KUT9 (putative E3 ubiquitin-protein ligase XBAT34 OS=Cucurbita maxima OX=3661 GN=LOC111498913 PE=4 SV=1) HSP 1 Score: 939.1 bits (2426), Expect = 7.4e-270 Identity = 464/493 (94.12%), Postives = 473/493 (95.94%), Query Frame = 0
BLAST of CmoCh17G001600 vs. ExPASy TrEMBL
Match: A0A5D3BQH3 (Putative E3 ubiquitin-protein ligase XBAT34 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold772G00200 PE=4 SV=1) HSP 1 Score: 815.5 bits (2105), Expect = 1.2e-232 Identity = 408/497 (82.09%), Postives = 445/497 (89.54%), Query Frame = 0
BLAST of CmoCh17G001600 vs. ExPASy TrEMBL
Match: A0A1S3CCX3 (putative E3 ubiquitin-protein ligase XBAT34 OS=Cucumis melo OX=3656 GN=LOC103499423 PE=4 SV=1) HSP 1 Score: 815.5 bits (2105), Expect = 1.2e-232 Identity = 408/497 (82.09%), Postives = 445/497 (89.54%), Query Frame = 0
BLAST of CmoCh17G001600 vs. ExPASy TrEMBL
Match: A0A0A0LLI3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G174140 PE=4 SV=1) HSP 1 Score: 795.8 bits (2054), Expect = 1.0e-226 Identity = 401/493 (81.34%), Postives = 437/493 (88.64%), Query Frame = 0
BLAST of CmoCh17G001600 vs. TAIR 10
Match: AT3G23280.1 (XB3 ortholog 5 in Arabidopsis thaliana ) HSP 1 Score: 469.5 bits (1207), Expect = 3.2e-132 Identity = 270/502 (53.78%), Postives = 334/502 (66.53%), Query Frame = 0
BLAST of CmoCh17G001600 vs. TAIR 10
Match: AT3G23280.2 (XB3 ortholog 5 in Arabidopsis thaliana ) HSP 1 Score: 459.1 bits (1180), Expect = 4.3e-129 Identity = 263/502 (52.39%), Postives = 321/502 (63.94%), Query Frame = 0
BLAST of CmoCh17G001600 vs. TAIR 10
Match: AT4G14365.1 (XB3 ortholog 4 in Arabidopsis thaliana ) HSP 1 Score: 350.9 bits (899), Expect = 1.7e-96 Identity = 210/494 (42.51%), Postives = 276/494 (55.87%), Query Frame = 0
BLAST of CmoCh17G001600 vs. TAIR 10
Match: AT2G17390.1 (ankyrin repeat-containing 2B ) HSP 1 Score: 76.3 bits (186), Expect = 7.9e-14 Identity = 48/123 (39.02%), Postives = 68/123 (55.28%), Query Frame = 0
BLAST of CmoCh17G001600 vs. TAIR 10
Match: AT4G35450.3 (ankyrin repeat-containing protein 2 ) HSP 1 Score: 76.3 bits (186), Expect = 7.9e-14 Identity = 47/123 (38.21%), Postives = 70/123 (56.91%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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