Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTGCGAAGAACCTCGGCTTTTCTGGTTTCTTCTTTACATTTCTACCTGTTCTCGGCTTCCTCAATCCCTCAAGAATTAACAGGTAATTCCAATTTTCTCGTTCTTCATTTTTCCTAGCAGACTGTAGTAACGGAACAAATCGTTCAATGTTTCTTGATTTGGTTCATTGCTGACTTAATTTGGCTGAGGATGGAGATTAGTACTAGTTTATCTTTTTCTCGATTTTCAAATTTATGTTGTGTTTTTGGGATCGGAGTCTCGAAATTACTATTTATTGCTGGAATTATCAAGAATCTGAACGGGATGGAAATGTGGTGCACGGATGCTGTGTCTTTTCCCATTTGAATGAGGTTTTGAGTTGATTATTGTAGCTCTTGGCTTCTTACCTGTTGCTGTTATTGTTTTTAAGTTTAACGAAATCAGAGAGATTGGTGTATTTCATTCATATCTTTTTTCATCCCACTCAACTGTGTTATTGGCATGCATGTTCATTACTAAACTTTGCCACTGTGGACTGTTTTCTTTTTTGTTGGAGCTTCTCTAAATTTCTATTTGTTCACAGAAATTAGCAGATATAATATGCAGCAAAGGGGAGGAGCAGAAGGGAAGGACTCGCTTTTCTCAAGCGACTTCATGGGTGGTTTCCCTGGATTTGGTTTATTTGGATCCCACAGAAGTATGATGTCTAGCCTTTTTGGGGAGAGGGATCCATTTGATGATCCTTTCTTTACTCGCCCTTTCAATAGCATGCTTGAGCCGAGTGTATCCAATTCCCATGCTGCTGCATATGATAAGGAGAAGAAAGATAGGGCACAGGGACTTGTGATTCAAGAAATCTCATCTGATGAGGAGAGGGAGGTAGATGACGATCTTGTGAACCAGAAACAGGACAAGAATGAGAATAGTTATGGGTCAGACAAGGAGCCATCAGTTGAGCATCCTGATGATCCTAATGATGGTAATTGAGCTGTGATTTTGATGTTCTTTGGTTACGTGAACTGTGTTATTCAAAATTTACCATGCTTCAATCATTTTATTGTTTGATGTTCTAGAGCGCCAGATAATAACTCGTAGAGGTAGTGAAGATAATAGTTTTGGAGCTCAGCCAAAGGCTAGTAAGTCCAGTATGCATACTTGCAAAGTCACATATGGCGGTGTAGATGGAGCATATTACACTTCTACTAGAACTAGAAGGGTAGATAATGAGGGAGTAAGTCAAATTCTTCTGGAATGACTGTAAACTTTATGCATAAAGTACTGGGTTTTGATAGCAGGTTTTATGAATCAGGTATTGCTTGAAGAGACGAAAGAAGCCGATAAGACAACAGGTCAGGCCACTCATAGGATCTCTAGAGGAATTCATGATAAGGTATAGATTGATAATGGAACTCTGATACTTCAAGGACTGATAGATTGTTTGACTTCACCATGTCTTGTCCTTGATTATCTTTAATGATGGCTTGACATTGAATTCATGTAAACCTAGGAAATTCTCAAAACCTAGTCTGAAATTGTTTTTCCCTTCAAGTTTTCTTCTCGTTTCATATAAGTTTTAAGTGGTCCTTTTGTCAGTATTGTGAACCATGTATCTAATACAAATAGCTGCTTGAAATGAAAGACTTTGGTTCTTTTCTGAAAAGGGGACAGTATTTGGTGCAGTCGGACTCCATTAGTGTCGTTATTATATGTGTAATTTTAAATTTGTGCCCAATAAGTGAAAATTGTTTCTTATTATATTTGTAATCCAATCGTTTCCATTAAGAGCGGCAGGGTTATATTTTTCCAATTTGTATGTGATGCAGTGTGTTACATGCTTCATTTTCACATCATTTTCTGTGTATTTCTTTCCGATATTCGTTTGTAGCCTCCATTGCTTGAGATATGAAGTTGAATTAGAAAGCTGGGTACTAAACCAATTGCTTTACCTCTGCAGGGTCATTCAGTTACAAGGAAGCTGAACCCAGATGGTAAAGTGGACGTACTTCAGACTCTGCACAATCTGAATGAAGGTCTACTCTGTCTGTTCAACCATAATTAATGATTATCTGGTTTTTTTCATGTTAAAGCTATAACACTGTGTCGCAATACTTTTCATACAGAAGAACTTGCTGGCTTTGAAAAAGCATGGAAAGGTAATTTTCAAGGGCATCAAAATGTTCCAAAAGGTGGATTTCATATGGATCCCAGTGCAGGTAATCTGATTATTTGCTTTTCCAAAAGCATCTTTCTCATCCACTCTAACCCCATTTTGAACATCATATCCTCCATTCCAATACAAAGGAGAGAGTTTCTTTCTTAAATAAGTATGCCTGCCGAGTAGTTCGGTTTGGTTAGGTTGGTAACCTCTCAATACACAAATAGAGAAAAGAAATTTCACAGACGACCTGTGCATCCTCATCACCTCTGAGATGAAGTATATATTATACATGTTCTGCTGTTTTTTCCCAAGACATTCTCTGCAAAATATCCTTTTGGCACTTCAGTTTGCTCTTTGGTGTCGGTGTTTAATTTTGATCAACATTGACGATGCAGAATCTAGTGGCAGTAGAAACAGAGAGATGATCAGTCGGGGTTTTCCATCTTTTTCTGAAAGGAAATATGAACATGGTGGTGGTGCAAGGGAGAGATCTGGTTCTGGTGGAACCAAAAAAGTAATCAGGATCAACATAGAATAG
mRNA sequence
CTTGCGAAGAACCTCGGCTTTTCTGGTTTCTTCTTTACATTTCTACCTGTTCTCGGCTTCCTCAATCCCTCAAGAATTAACAGAAATTAGCAGATATAATATGCAGCAAAGGGGAGGAGCAGAAGGGAAGGACTCGCTTTTCTCAAGCGACTTCATGGGTGGTTTCCCTGGATTTGGTTTATTTGGATCCCACAGAAGTATGATGTCTAGCCTTTTTGGGGAGAGGGATCCATTTGATGATCCTTTCTTTACTCGCCCTTTCAATAGCATGCTTGAGCCGAGTGTATCCAATTCCCATGCTGCTGCATATGATAAGGAGAAGAAAGATAGGGCACAGGGACTTGTGATTCAAGAAATCTCATCTGATGAGGAGAGGGAGGTAGATGACGATCTTGTGAACCAGAAACAGGACAAGAATGAGAATAGTTATGGGTCAGACAAGGAGCCATCAGTTGAGCATCCTGATGATCCTAATGATGAGCGCCAGATAATAACTCGTAGAGGTAGTGAAGATAATAGTTTTGGAGCTCAGCCAAAGGCTAGTAAGTCCAGTATGCATACTTGCAAAGTCACATATGGCGGTGTAGATGGAGCATATTACACTTCTACTAGAACTAGAAGGGTAGATAATGAGGGAGTATTGCTTGAAGAGACGAAAGAAGCCGATAAGACAACAGGTCAGGCCACTCATAGGATCTCTAGAGGAATTCATGATAAGGGTCATTCAGTTACAAGGAAGCTGAACCCAGATGGTAAAGTGGACGTACTTCAGACTCTGCACAATCTGAATGAAGAAGAACTTGCTGGCTTTGAAAAAGCATGGAAAGGTAATTTTCAAGGGCATCAAAATGTTCCAAAAGGTGGATTTCATATGGATCCCAGTGCAGAATCTAGTGGCAGTAGAAACAGAGAGATGATCAGTCGGGGTTTTCCATCTTTTTCTGAAAGGAAATATGAACATGGTGGTGGTGCAAGGGAGAGATCTGGTTCTGGTGGAACCAAAAAAGTAATCAGGATCAACATAGAATAG
Coding sequence (CDS)
ATGCAGCAAAGGGGAGGAGCAGAAGGGAAGGACTCGCTTTTCTCAAGCGACTTCATGGGTGGTTTCCCTGGATTTGGTTTATTTGGATCCCACAGAAGTATGATGTCTAGCCTTTTTGGGGAGAGGGATCCATTTGATGATCCTTTCTTTACTCGCCCTTTCAATAGCATGCTTGAGCCGAGTGTATCCAATTCCCATGCTGCTGCATATGATAAGGAGAAGAAAGATAGGGCACAGGGACTTGTGATTCAAGAAATCTCATCTGATGAGGAGAGGGAGGTAGATGACGATCTTGTGAACCAGAAACAGGACAAGAATGAGAATAGTTATGGGTCAGACAAGGAGCCATCAGTTGAGCATCCTGATGATCCTAATGATGAGCGCCAGATAATAACTCGTAGAGGTAGTGAAGATAATAGTTTTGGAGCTCAGCCAAAGGCTAGTAAGTCCAGTATGCATACTTGCAAAGTCACATATGGCGGTGTAGATGGAGCATATTACACTTCTACTAGAACTAGAAGGGTAGATAATGAGGGAGTATTGCTTGAAGAGACGAAAGAAGCCGATAAGACAACAGGTCAGGCCACTCATAGGATCTCTAGAGGAATTCATGATAAGGGTCATTCAGTTACAAGGAAGCTGAACCCAGATGGTAAAGTGGACGTACTTCAGACTCTGCACAATCTGAATGAAGAAGAACTTGCTGGCTTTGAAAAAGCATGGAAAGGTAATTTTCAAGGGCATCAAAATGTTCCAAAAGGTGGATTTCATATGGATCCCAGTGCAGAATCTAGTGGCAGTAGAAACAGAGAGATGATCAGTCGGGGTTTTCCATCTTTTTCTGAAAGGAAATATGAACATGGTGGTGGTGCAAGGGAGAGATCTGGTTCTGGTGGAACCAAAAAAGTAATCAGGATCAACATAGAATAG
Protein sequence
MQQRGGAEGKDSLFSSDFMGGFPGFGLFGSHRSMMSSLFGERDPFDDPFFTRPFNSMLEPSVSNSHAAAYDKEKKDRAQGLVIQEISSDEEREVDDDLVNQKQDKNENSYGSDKEPSVEHPDDPNDERQIITRRGSEDNSFGAQPKASKSSMHTCKVTYGGVDGAYYTSTRTRRVDNEGVLLEETKEADKTTGQATHRISRGIHDKGHSVTRKLNPDGKVDVLQTLHNLNEEELAGFEKAWKGNFQGHQNVPKGGFHMDPSAESSGSRNREMISRGFPSFSERKYEHGGGARERSGSGGTKKVIRINIE
Homology
BLAST of CmoCh17G000350 vs. ExPASy TrEMBL
Match:
A0A6J1H4K0 (uncharacterized protein LOC111459979 OS=Cucurbita moschata OX=3662 GN=LOC111459979 PE=3 SV=1)
HSP 1 Score: 612.1 bits (1577), Expect = 1.3e-171
Identity = 309/309 (100.00%), Postives = 309/309 (100.00%), Query Frame = 0
Query: 1 MQQRGGAEGKDSLFSSDFMGGFPGFGLFGSHRSMMSSLFGERDPFDDPFFTRPFNSMLEP 60
MQQRGGAEGKDSLFSSDFMGGFPGFGLFGSHRSMMSSLFGERDPFDDPFFTRPFNSMLEP
Sbjct: 1 MQQRGGAEGKDSLFSSDFMGGFPGFGLFGSHRSMMSSLFGERDPFDDPFFTRPFNSMLEP 60
Query: 61 SVSNSHAAAYDKEKKDRAQGLVIQEISSDEEREVDDDLVNQKQDKNENSYGSDKEPSVEH 120
SVSNSHAAAYDKEKKDRAQGLVIQEISSDEEREVDDDLVNQKQDKNENSYGSDKEPSVEH
Sbjct: 61 SVSNSHAAAYDKEKKDRAQGLVIQEISSDEEREVDDDLVNQKQDKNENSYGSDKEPSVEH 120
Query: 121 PDDPNDERQIITRRGSEDNSFGAQPKASKSSMHTCKVTYGGVDGAYYTSTRTRRVDNEGV 180
PDDPNDERQIITRRGSEDNSFGAQPKASKSSMHTCKVTYGGVDGAYYTSTRTRRVDNEGV
Sbjct: 121 PDDPNDERQIITRRGSEDNSFGAQPKASKSSMHTCKVTYGGVDGAYYTSTRTRRVDNEGV 180
Query: 181 LLEETKEADKTTGQATHRISRGIHDKGHSVTRKLNPDGKVDVLQTLHNLNEEELAGFEKA 240
LLEETKEADKTTGQATHRISRGIHDKGHSVTRKLNPDGKVDVLQTLHNLNEEELAGFEKA
Sbjct: 181 LLEETKEADKTTGQATHRISRGIHDKGHSVTRKLNPDGKVDVLQTLHNLNEEELAGFEKA 240
Query: 241 WKGNFQGHQNVPKGGFHMDPSAESSGSRNREMISRGFPSFSERKYEHGGGARERSGSGGT 300
WKGNFQGHQNVPKGGFHMDPSAESSGSRNREMISRGFPSFSERKYEHGGGARERSGSGGT
Sbjct: 241 WKGNFQGHQNVPKGGFHMDPSAESSGSRNREMISRGFPSFSERKYEHGGGARERSGSGGT 300
Query: 301 KKVIRINIE 310
KKVIRINIE
Sbjct: 301 KKVIRINIE 309
BLAST of CmoCh17G000350 vs. ExPASy TrEMBL
Match:
A0A6J1KXU0 (uncharacterized protein LOC111499178 OS=Cucurbita maxima OX=3661 GN=LOC111499178 PE=3 SV=1)
HSP 1 Score: 587.0 bits (1512), Expect = 4.5e-164
Identity = 297/309 (96.12%), Postives = 302/309 (97.73%), Query Frame = 0
Query: 1 MQQRGGAEGKDSLFSSDFMGGFPGFGLFGSHRSMMSSLFGERDPFDDPFFTRPFNSMLEP 60
MQQRGGAEGKDSLFSSDFMGGFPGFG+FGSHRSMMS+LFGERDPFDDPFFTRPFNSMLEP
Sbjct: 1 MQQRGGAEGKDSLFSSDFMGGFPGFGIFGSHRSMMSNLFGERDPFDDPFFTRPFNSMLEP 60
Query: 61 SVSNSHAAAYDKEKKDRAQGLVIQEISSDEEREVDDDLVNQKQDKNENSYGSDKEPSVEH 120
SVSN HAAAYDK KKD AQGLVIQEISSDEEREVDDDLV+QKQDKNENSYGSDKEPSVEH
Sbjct: 61 SVSNPHAAAYDKGKKDGAQGLVIQEISSDEEREVDDDLVDQKQDKNENSYGSDKEPSVEH 120
Query: 121 PDDPNDERQIITRRGSEDNSFGAQPKASKSSMHTCKVTYGGVDGAYYTSTRTRRVDNEGV 180
PDDPNDERQIITRRGSE+NS GAQPKASKSSMHTCKVTYGGVDGAYYTSTRTRRVDNEGV
Sbjct: 121 PDDPNDERQIITRRGSENNSIGAQPKASKSSMHTCKVTYGGVDGAYYTSTRTRRVDNEGV 180
Query: 181 LLEETKEADKTTGQATHRISRGIHDKGHSVTRKLNPDGKVDVLQTLHNLNEEELAGFEKA 240
LLEETKEADKTTGQATHRISRGIHDKGHSVTRKLNPDGKVDVLQTLHNLNEEELAGFEKA
Sbjct: 181 LLEETKEADKTTGQATHRISRGIHDKGHSVTRKLNPDGKVDVLQTLHNLNEEELAGFEKA 240
Query: 241 WKGNFQGHQNVPKGGFHMDPSAESSGSRNREMISRGFPSFSERKYEHGGGARERSGSGGT 300
WKGNFQGHQ+VPKGGFHMDPSAESSGSRNREMISR FPSFSERKYEHGGGARE SGSG T
Sbjct: 241 WKGNFQGHQSVPKGGFHMDPSAESSGSRNREMISRAFPSFSERKYEHGGGARESSGSGRT 300
Query: 301 KKVIRINIE 310
KKVIRINIE
Sbjct: 301 KKVIRINIE 309
BLAST of CmoCh17G000350 vs. ExPASy TrEMBL
Match:
A0A1S3CC93 (uncharacterized protein LOC103499022 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499022 PE=3 SV=1)
HSP 1 Score: 456.8 bits (1174), Expect = 7.0e-125
Identity = 236/310 (76.13%), Postives = 262/310 (84.52%), Query Frame = 0
Query: 1 MQQRGGAEGKDSLFSSDFMGGFPGFGLFGSHRSMMSSLFGERDPFDDPFFTRPFNSMLEP 60
M+QR AEGKDSLFS DFMGGFPGFGLFGSHR M+ SLFGERDPFDDPFFTRP SM E
Sbjct: 1 MEQRRAAEGKDSLFSGDFMGGFPGFGLFGSHRGMIPSLFGERDPFDDPFFTRPLGSMFES 60
Query: 61 SVSNSHAAAYDKEKKDRAQGLVIQEISSDEEREVDDDLVNQKQDKNENSYGSDKEPSVEH 120
S+S SH AAYDK KKD A GLVIQEI SDEERE DDD +Q+ NEN+ GS +EPSVEH
Sbjct: 61 SISGSHTAAYDKGKKDGAPGLVIQEICSDEEREEDDDFRDQRHGWNENNSGSGQEPSVEH 120
Query: 121 PDDPNDERQIITRRGSEDNSFGAQPKASKSSMHTCKVTYGGVDGAYYTSTRTRRVDNEGV 180
PDD NDERQI T+ GSE+NSF QPKA KSS+H+CKVTYGGVDGAYY+STRTRRVDNEGV
Sbjct: 121 PDDSNDERQITTQGGSENNSFRVQPKAGKSSVHSCKVTYGGVDGAYYSSTRTRRVDNEGV 180
Query: 181 LLEETKEADKTTGQATHRISRGIHDKGHSVTRKLNPDGKVDVLQTLHNLNEEELAGFEKA 240
LLEETKEADKTTGQATHR+SRGIHDKGHSVTRKLNPDGKVDV+QTLHNL+EEEL GFE+A
Sbjct: 181 LLEETKEADKTTGQATHRVSRGIHDKGHSVTRKLNPDGKVDVVQTLHNLDEEELPGFEQA 240
Query: 241 WKGNFQGHQNVPKGGF-HMDPSAESSGSRNREMISRGFPSFSERKYEHGGGARERSGSGG 300
W GNFQGH+++P GF HMDP+ ES GSRN E+ S GFP +ER+ E+ GG R+ S G
Sbjct: 241 WNGNFQGHRHIPDAGFHHMDPNFESRGSRNNEISSWGFPFLAERRNENDGG-RDSSTPGR 300
Query: 301 TKKVIRINIE 310
TKKVIRINI+
Sbjct: 301 TKKVIRINID 309
BLAST of CmoCh17G000350 vs. ExPASy TrEMBL
Match:
A0A5A7TD14 (Myeloid leukemia factor 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G00470 PE=3 SV=1)
HSP 1 Score: 453.0 bits (1164), Expect = 1.0e-123
Identity = 234/310 (75.48%), Postives = 261/310 (84.19%), Query Frame = 0
Query: 1 MQQRGGAEGKDSLFSSDFMGGFPGFGLFGSHRSMMSSLFGERDPFDDPFFTRPFNSMLEP 60
M+QR AEGKDSLFS DFMGGFPGFGLFGSHR M+ SLFGERDPFDDPFFTRP SM E
Sbjct: 1 MEQRRAAEGKDSLFSGDFMGGFPGFGLFGSHRGMIPSLFGERDPFDDPFFTRPLGSMFES 60
Query: 61 SVSNSHAAAYDKEKKDRAQGLVIQEISSDEEREVDDDLVNQKQDKNENSYGSDKEPSVEH 120
S+S SH AAYDK KKD A GLVIQEI SDEERE DD+ +Q+ NEN+ GS +EPSVEH
Sbjct: 61 SISGSHTAAYDKGKKDGAPGLVIQEICSDEEREEDDEFRDQRHGWNENNSGSGQEPSVEH 120
Query: 121 PDDPNDERQIITRRGSEDNSFGAQPKASKSSMHTCKVTYGGVDGAYYTSTRTRRVDNEGV 180
PDD NDERQI T+ SE+NSF QPKA KSS+H+CKVTYGGVDGAYY+STRTRRVDNEGV
Sbjct: 121 PDDSNDERQITTQGSSENNSFRVQPKAGKSSVHSCKVTYGGVDGAYYSSTRTRRVDNEGV 180
Query: 181 LLEETKEADKTTGQATHRISRGIHDKGHSVTRKLNPDGKVDVLQTLHNLNEEELAGFEKA 240
LLEETKEADKTTGQATHR+SRGIHDKGHSVTRKLNPDGKVDV+QTLHNL+EEEL GFE+A
Sbjct: 181 LLEETKEADKTTGQATHRVSRGIHDKGHSVTRKLNPDGKVDVVQTLHNLDEEELPGFEQA 240
Query: 241 WKGNFQGHQNVPKGGF-HMDPSAESSGSRNREMISRGFPSFSERKYEHGGGARERSGSGG 300
W GNFQGH+++P GF HMDP+ ES GSRN E+ S GFP +ER+ E+ GG R+ S G
Sbjct: 241 WNGNFQGHRHIPDAGFHHMDPNFESRGSRNNEISSWGFPFLAERRNENDGG-RDSSTPGR 300
Query: 301 TKKVIRINIE 310
TKKVIRINI+
Sbjct: 301 TKKVIRINID 309
BLAST of CmoCh17G000350 vs. ExPASy TrEMBL
Match:
A0A1S3CD29 (uncharacterized protein LOC103499022 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499022 PE=3 SV=1)
HSP 1 Score: 404.8 bits (1039), Expect = 3.2e-109
Identity = 218/310 (70.32%), Postives = 243/310 (78.39%), Query Frame = 0
Query: 1 MQQRGGAEGKDSLFSSDFMGGFPGFGLFGSHRSMMSSLFGERDPFDDPFFTRPFNSMLEP 60
M+QR AEGKDSLFS DFMGGFPGFGLFGSHR SM E
Sbjct: 1 MEQRRAAEGKDSLFSGDFMGGFPGFGLFGSHR----------------------GSMFES 60
Query: 61 SVSNSHAAAYDKEKKDRAQGLVIQEISSDEEREVDDDLVNQKQDKNENSYGSDKEPSVEH 120
S+S SH AAYDK KKD A GLVIQEI SDEERE DDD +Q+ NEN+ GS +EPSVEH
Sbjct: 61 SISGSHTAAYDKGKKDGAPGLVIQEICSDEEREEDDDFRDQRHGWNENNSGSGQEPSVEH 120
Query: 121 PDDPNDERQIITRRGSEDNSFGAQPKASKSSMHTCKVTYGGVDGAYYTSTRTRRVDNEGV 180
PDD NDERQI T+ GSE+NSF QPKA KSS+H+CKVTYGGVDGAYY+STRTRRVDNEGV
Sbjct: 121 PDDSNDERQITTQGGSENNSFRVQPKAGKSSVHSCKVTYGGVDGAYYSSTRTRRVDNEGV 180
Query: 181 LLEETKEADKTTGQATHRISRGIHDKGHSVTRKLNPDGKVDVLQTLHNLNEEELAGFEKA 240
LLEETKEADKTTGQATHR+SRGIHDKGHSVTRKLNPDGKVDV+QTLHNL+EEEL GFE+A
Sbjct: 181 LLEETKEADKTTGQATHRVSRGIHDKGHSVTRKLNPDGKVDVVQTLHNLDEEELPGFEQA 240
Query: 241 WKGNFQGHQNVPKGGF-HMDPSAESSGSRNREMISRGFPSFSERKYEHGGGARERSGSGG 300
W GNFQGH+++P GF HMDP+ ES GSRN E+ S GFP +ER+ E+ GG R+ S G
Sbjct: 241 WNGNFQGHRHIPDAGFHHMDPNFESRGSRNNEISSWGFPFLAERRNENDGG-RDSSTPGR 287
Query: 301 TKKVIRINIE 310
TKKVIRINI+
Sbjct: 301 TKKVIRINID 287
BLAST of CmoCh17G000350 vs. TAIR 10
Match:
AT2G45380.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, flower, cultured cell; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT4G34070.1); Has 171 Blast hits to 170 proteins in 31 species: Archae - 2; Bacteria - 0; Metazoa - 68; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). )
HSP 1 Score: 217.6 bits (553), Expect = 1.4e-56
Identity = 145/295 (49.15%), Postives = 185/295 (62.71%), Query Frame = 0
Query: 21 GFPGFGLFGSHRSMMSSLFGERDPFDDPFFTRPFNSMLEPSVSNSHAAAY-DKEKKDRAQ 80
G P G FG R SLFG RDPFDDPFF+RPF +LEPS + S A++ + K + +
Sbjct: 221 GDPFGGRFGGFR---GSLFGGRDPFDDPFFSRPFEDLLEPSNTFSSGASFSNAHKNNGGR 280
Query: 81 GLVIQEISSDEEREVDDDLVNQKQDKNENSYGSDKEPSVEHPDDPND-ERQI--ITRRGS 140
GL I+E+ SDEE E D+ Q+ S +PSVEHP+D +D ER+I + +R
Sbjct: 281 GLTIEELPSDEEVEERKDIGIDDQE----HASSVNKPSVEHPEDDSDAERKIQNVNQRSD 340
Query: 141 EDNSFGAQPKASKSSMHTCKVTYGGVDGAYYTSTRTRRVDNEGVLLEETKEADKTTGQAT 200
+ G Q +A+ H KVTYGG+ GAYYTSTRTRR D +G+++EE+KEADKTTG+AT
Sbjct: 341 FNRREGTQSRANTFRHHISKVTYGGIHGAYYTSTRTRRKDGDGMVVEESKEADKTTGEAT 400
Query: 201 HRISRGIHDKGHSVTRKLNPDGKVDVLQTLHNLNEEELAGFEKAWKGNFQGHQNVPKGGF 260
HRISRGI+DKGHSVTRKLN G V+ QTLHNL+E+EL+GFE+AWKGN G
Sbjct: 401 HRISRGINDKGHSVTRKLNSSGGVESTQTLHNLDEDELSGFEEAWKGN-------SSLGK 460
Query: 261 HMDPSAESSGSRNREMISRGFPSFSE--RKYEHGGGARERSGSGGTKKVIRINIE 310
H E +GS N PS + R+ + RS + G KKV+RINIE
Sbjct: 461 H-----EFTGSDN-SFGGWVLPSLDQIRRQTDQSQTGSSRSAT-GAKKVVRINIE 494
BLAST of CmoCh17G000350 vs. TAIR 10
Match:
AT2G45380.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, flower, cultured cell; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT4G22740.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )
HSP 1 Score: 156.0 bits (393), Expect = 4.9e-38
Identity = 94/183 (51.37%), Postives = 118/183 (64.48%), Query Frame = 0
Query: 129 QIITRRGSEDNSFGAQPKASKSSMHTCKVTYGGVDGAYYTSTRTRRVDNEGVLLEETKEA 188
Q + +R + G Q +A+ H KVTYGG+ GAYYTSTRTRR D +G+++EE+KEA
Sbjct: 18 QNVNQRSDFNRREGTQSRANTFRHHISKVTYGGIHGAYYTSTRTRRKDGDGMVVEESKEA 77
Query: 189 DKTTGQATHRISRGIHDKGHSVTRKLNPDGKVDVLQTLHNLNEEELAGFEKAWKGNFQGH 248
DKTTG+ATHRISRGI+DKGHSVTRKLN G V+ QTLHNL+E+EL+GFE+AWKGN
Sbjct: 78 DKTTGEATHRISRGINDKGHSVTRKLNSSGGVESTQTLHNLDEDELSGFEEAWKGN---- 137
Query: 249 QNVPKGGFHMDPSAESSGSRNREMISRGFPSFSE--RKYEHGGGARERSGSGGTKKVIRI 308
G H E +GS N PS + R+ + RS + G KKV+RI
Sbjct: 138 ---SSLGKH-----EFTGSDN-SFGGWVLPSLDQIRRQTDQSQTGSSRSAT-GAKKVVRI 186
Query: 309 NIE 310
NIE
Sbjct: 198 NIE 186
BLAST of CmoCh17G000350 vs. TAIR 10
Match:
AT4G22740.1 (glycine-rich protein )
HSP 1 Score: 151.0 bits (380), Expect = 1.6e-36
Identity = 110/301 (36.54%), Postives = 154/301 (51.16%), Query Frame = 0
Query: 20 GGFPGFGLFGSHRSMMSSLFGERDPFDDPFFTRPF------NSMLEPSVSNSHAAAY--- 79
G F GFG S+MS+ FG RDPFDDPFFT+PF ++ PS+ N A +
Sbjct: 32 GSFGGFGGPNGPPSLMSNFFGGRDPFDDPFFTQPFGGGMFQSNFFGPSM-NPFAEMHRLP 91
Query: 80 -------DKEKKDRAQGLVIQEISSDEER----------------------EVDDDLVNQ 139
R++G VI+EI SD+E+ E +D V +
Sbjct: 92 QGFIENNQPPGPSRSRGPVIEEIDSDDEKEGEGDKEKKGSLGKHGRSSSEAETEDARVRE 151
Query: 140 KQDKNENSYGSDKEPSVEHPDDPNDERQIITRRGSEDNSFGA---------QPKASKSSM 199
++++ S + E + N + RR + + QP+ S
Sbjct: 152 RRNRQMQSMNVNAERRNREMQNMNVNAE---RRNPQMQNMNVNAMVNNGQWQPQTGSYSF 211
Query: 200 HTCKVTYGGVDGAYYTSTRTRRVDNEGVLLEETKEADKTTGQATHRISRGIHDKGHSVTR 259
+ VTYGG +G YYTS++TRR ++G+ LEE++EA+ T +A H ISRG+H+KGH+V R
Sbjct: 212 QSSTVTYGGQNGNYYTSSKTRRTGSDGLTLEESREANTATREAAHMISRGLHNKGHTVAR 271
Query: 260 KLNPDGKVDVLQTLHNLNEEELAGFEKAWKGNFQGHQNVP--KGGFHMDPSAESSGSRNR 272
KLN DG+VD QTLHNLNE+ELAGFE++W GN + +P G F SG NR
Sbjct: 272 KLNSDGRVDTTQTLHNLNEDELAGFEQSWSGNARRQMQLPSRSGSF-------GSGLVNR 321
BLAST of CmoCh17G000350 vs. TAIR 10
Match:
AT4G22740.2 (glycine-rich protein )
HSP 1 Score: 151.0 bits (380), Expect = 1.6e-36
Identity = 110/301 (36.54%), Postives = 154/301 (51.16%), Query Frame = 0
Query: 20 GGFPGFGLFGSHRSMMSSLFGERDPFDDPFFTRPF------NSMLEPSVSNSHAAAY--- 79
G F GFG S+MS+ FG RDPFDDPFFT+PF ++ PS+ N A +
Sbjct: 32 GSFGGFGGPNGPPSLMSNFFGGRDPFDDPFFTQPFGGGMFQSNFFGPSM-NPFAEMHRLP 91
Query: 80 -------DKEKKDRAQGLVIQEISSDEER----------------------EVDDDLVNQ 139
R++G VI+EI SD+E+ E +D V +
Sbjct: 92 QGFIENNQPPGPSRSRGPVIEEIDSDDEKEGEGDKEKKGSLGKHGRSSSEAETEDARVRE 151
Query: 140 KQDKNENSYGSDKEPSVEHPDDPNDERQIITRRGSEDNSFGA---------QPKASKSSM 199
++++ S + E + N + RR + + QP+ S
Sbjct: 152 RRNRQMQSMNVNAERRNREMQNMNVNAE---RRNPQMQNMNVNAMVNNGQWQPQTGSYSF 211
Query: 200 HTCKVTYGGVDGAYYTSTRTRRVDNEGVLLEETKEADKTTGQATHRISRGIHDKGHSVTR 259
+ VTYGG +G YYTS++TRR ++G+ LEE++EA+ T +A H ISRG+H+KGH+V R
Sbjct: 212 QSSTVTYGGQNGNYYTSSKTRRTGSDGLTLEESREANTATREAAHMISRGLHNKGHTVAR 271
Query: 260 KLNPDGKVDVLQTLHNLNEEELAGFEKAWKGNFQGHQNVP--KGGFHMDPSAESSGSRNR 272
KLN DG+VD QTLHNLNE+ELAGFE++W GN + +P G F SG NR
Sbjct: 272 KLNSDGRVDTTQTLHNLNEDELAGFEQSWSGNARRQMQLPSRSGSF-------GSGLVNR 321
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1H4K0 | 1.3e-171 | 100.00 | uncharacterized protein LOC111459979 OS=Cucurbita moschata OX=3662 GN=LOC1114599... | [more] |
A0A6J1KXU0 | 4.5e-164 | 96.12 | uncharacterized protein LOC111499178 OS=Cucurbita maxima OX=3661 GN=LOC111499178... | [more] |
A0A1S3CC93 | 7.0e-125 | 76.13 | uncharacterized protein LOC103499022 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... | [more] |
A0A5A7TD14 | 1.0e-123 | 75.48 | Myeloid leukemia factor 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E... | [more] |
A0A1S3CD29 | 3.2e-109 | 70.32 | uncharacterized protein LOC103499022 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... | [more] |
Match Name | E-value | Identity | Description | |
AT2G45380.1 | 1.4e-56 | 49.15 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... | [more] |
AT2G45380.2 | 4.9e-38 | 51.37 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... | [more] |
AT4G22740.1 | 1.6e-36 | 36.54 | glycine-rich protein | [more] |
AT4G22740.2 | 1.6e-36 | 36.54 | glycine-rich protein | [more] |