CmoCh16G013090 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGATTACAAGAAACTGGTTCAGAAGAGCTCGAAGGAAGCTGAGTAGAAAAGCCAACAGAGACATTGTTTTTCTGCAGACAAACGCCAGCCCAAATCATGATGAAGAAGAAACCAATCTTACATTAGCACAACAACAAGAAGATGAAGAACATGAAGATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATGAAGAATTTACATATGATTCAAGGATACCCAGTTTTCAAAACAAAGATTTGTCTATAGAGGAAGTGGCAGCCATCAAAATCCAAGCTTGTTTCAGAGGCCATCTTGTATTATATCTTACCATGACATATTTGTTCTTTGAATTCTTGATGAATTTGTCTATGCTAAAGTAGGCTACATTTAGTCCTTTGGTGTATTATCAACGCCTACGCTTGTTGTTCAGGCAAGACGAGCATTTCAAGCACTAAGAAGCTTGGTGAAGCTGCAAGCGCTGGCTCGAGGGGTGTGTGCGAGGAGGCAGGCGCGGGTAGCTCTTCAATTCATGCATGCATTGGTTCGATTGCAGGTTCGGGTTCGTGCTCGCCAGCTTCTGAACAGGTACAGTGAAGAGTCTGATTATTGA ATGGGGATTACAAGAAACTGGTTCAGAAGAGCTCGAAGGAAGCTGAGTAGAAAAGCCAACAGAGACATTGTTTTTCTGCAGACAAACGCCAGCCCAAATCATGATGAAGAAGAAACCAATCTTACATTAGCACAACAACAAGAAGATGAAGAACATGAAGATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATGAAGAATTTACATATGATTCAAGGATACCCAGTTTTCAAAACAAAGATTTGTCTATAGAGGAAGTGGCAGCCATCAAAATCCAAGCTTGTTTCAGAGGCCATCTTGCAAGACGAGCATTTCAAGCACTAAGAAGCTTGGTGAAGCTGCAAGCGCTGGCTCGAGGGGTGTGTGCGAGGAGGCAGGCGCGGGTAGCTCTTCAATTCATGCATGCATTGGTTCGATTGCAGGTTCGGGTTCGTGCTCGCCAGCTTCTGAACAGGTACAGTGAAGAGTCTGATTATTGA ATGGGGATTACAAGAAACTGGTTCAGAAGAGCTCGAAGGAAGCTGAGTAGAAAAGCCAACAGAGACATTGTTTTTCTGCAGACAAACGCCAGCCCAAATCATGATGAAGAAGAAACCAATCTTACATTAGCACAACAACAAGAAGATGAAGAACATGAAGATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATGAAGAATTTACATATGATTCAAGGATACCCAGTTTTCAAAACAAAGATTTGTCTATAGAGGAAGTGGCAGCCATCAAAATCCAAGCTTGTTTCAGAGGCCATCTTGCAAGACGAGCATTTCAAGCACTAAGAAGCTTGGTGAAGCTGCAAGCGCTGGCTCGAGGGGTGTGTGCGAGGAGGCAGGCGCGGGTAGCTCTTCAATTCATGCATGCATTGGTTCGATTGCAGGTTCGGGTTCGTGCTCGCCAGCTTCTGAACAGGTACAGTGAAGAGTCTGATTATTGA MGITRNWFRRARRKLSRKANRDIVFLQTNASPNHDEEETNLTLAQQQEDEEHEDEEEEEEEEEEDEEFTYDSRIPSFQNKDLSIEEVAAIKIQACFRGHLARRAFQALRSLVKLQALARGVCARRQARVALQFMHALVRLQVRVRARQLLNRYSEESDY Homology
BLAST of CmoCh16G013090 vs. ExPASy Swiss-Prot
Match: Q9SD11 (Protein IQ-DOMAIN 20 OS=Arabidopsis thaliana OX=3702 GN=IQD20 PE=1 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 5.2e-20 Identity = 54/67 (80.60%), Postives = 61/67 (91.04%), Query Frame = 0
BLAST of CmoCh16G013090 vs. ExPASy Swiss-Prot
Match: Q9FT53 (Protein IQ-DOMAIN 3 OS=Arabidopsis thaliana OX=3702 GN=IQD3 PE=1 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 5.2e-12 Identity = 41/74 (55.41%), Postives = 55/74 (74.32%), Query Frame = 0
BLAST of CmoCh16G013090 vs. ExPASy Swiss-Prot
Match: A0A1P8B590 (Protein IQ-DOMAIN 19 OS=Arabidopsis thaliana OX=3702 GN=IQD19 PE=1 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 2.0e-11 Identity = 38/66 (57.58%), Postives = 49/66 (74.24%), Query Frame = 0
BLAST of CmoCh16G013090 vs. ExPASy Swiss-Prot
Match: O64852 (Protein IQ-DOMAIN 6 OS=Arabidopsis thaliana OX=3702 GN=IQD6 PE=1 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 5.7e-11 Identity = 40/65 (61.54%), Postives = 50/65 (76.92%), Query Frame = 0
BLAST of CmoCh16G013090 vs. ExPASy Swiss-Prot
Match: F4J061 (Protein IQ-DOMAIN 5 OS=Arabidopsis thaliana OX=3702 GN=IQD5 PE=1 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 2.2e-10 Identity = 41/76 (53.95%), Postives = 52/76 (68.42%), Query Frame = 0
BLAST of CmoCh16G013090 vs. ExPASy TrEMBL
Match: A0A6J1E674 (protein IQ-DOMAIN 31-like OS=Cucurbita moschata OX=3662 GN=LOC111431153 PE=4 SV=1) HSP 1 Score: 282.7 bits (722), Expect = 9.3e-73 Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0
BLAST of CmoCh16G013090 vs. ExPASy TrEMBL
Match: A0A0A0L4V7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G002470 PE=4 SV=1) HSP 1 Score: 222.2 bits (565), Expect = 1.5e-54 Identity = 135/159 (84.91%), Postives = 140/159 (88.05%), Query Frame = 0
BLAST of CmoCh16G013090 vs. ExPASy TrEMBL
Match: A0A6J1H822 (protein IQ-DOMAIN 1 OS=Cucurbita moschata OX=3662 GN=LOC111460382 PE=4 SV=1) HSP 1 Score: 184.5 bits (467), Expect = 3.5e-43 Identity = 107/158 (67.72%), Postives = 117/158 (74.05%), Query Frame = 0
BLAST of CmoCh16G013090 vs. ExPASy TrEMBL
Match: A0A6J1I877 (protein IQ-DOMAIN 1 OS=Cucurbita maxima OX=3661 GN=LOC111470076 PE=4 SV=1) HSP 1 Score: 176.4 bits (446), Expect = 9.4e-41 Identity = 106/159 (66.67%), Postives = 113/159 (71.07%), Query Frame = 0
BLAST of CmoCh16G013090 vs. ExPASy TrEMBL
Match: A0A1R3GCE4 (IQ motif, EF-hand binding site OS=Corchorus capsularis OX=210143 GN=CCACVL1_27041 PE=4 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 1.0e-23 Identity = 78/155 (50.32%), Postives = 99/155 (63.87%), Query Frame = 0
BLAST of CmoCh16G013090 vs. TAIR 10
Match: AT3G51380.1 (IQ-domain 20 ) HSP 1 Score: 99.0 bits (245), Expect = 3.7e-21 Identity = 54/67 (80.60%), Postives = 61/67 (91.04%), Query Frame = 0
BLAST of CmoCh16G013090 vs. TAIR 10
Match: AT3G52290.1 (IQ-domain 3 ) HSP 1 Score: 72.4 bits (176), Expect = 3.7e-13 Identity = 41/74 (55.41%), Postives = 55/74 (74.32%), Query Frame = 0
BLAST of CmoCh16G013090 vs. TAIR 10
Match: AT4G14750.1 (IQ-domain 19 ) HSP 1 Score: 70.5 bits (171), Expect = 1.4e-12 Identity = 38/66 (57.58%), Postives = 49/66 (74.24%), Query Frame = 0
BLAST of CmoCh16G013090 vs. TAIR 10
Match: AT2G26180.1 (IQ-domain 6 ) HSP 1 Score: 68.9 bits (167), Expect = 4.1e-12 Identity = 40/65 (61.54%), Postives = 50/65 (76.92%), Query Frame = 0
BLAST of CmoCh16G013090 vs. TAIR 10
Match: AT3G22190.1 (IQ-domain 5 ) HSP 1 Score: 67.0 bits (162), Expect = 1.5e-11 Identity = 41/76 (53.95%), Postives = 52/76 (68.42%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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