CmoCh16G013020 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh16G013020
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	NEP1-interacting protein 2
Location	Cmo_Chr16: 9267706 .. 9269643 (-)
RNA-Seq Expression	CmoCh16G013020
Synteny	CmoCh16G013020

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGCACCGAACCCCCCACAGCCTCGAAATCTCCGAAAGGAAAATAAGAAATGTAAGAACATCAAAGTTAAAAAAAAGTAAAAAAAAGAAAAAACAACGGAGGAAATTGGTGACGGTGGAGCCACTTGATCGGCGGTGGATTTGTGGAGGAGGAGGAGCGAGAAGATGGCATTGGTATGGCGATCTCGAATCCTGTTTGATTTGGGGTTAAAGCCATTTTAGATGAATCTGGAATTGGCATTGCAAATTGTTAGGGTTTGTTGTGGCCCAATTAATTACCCTGAACTACACGCTGAAGCAAGCCATCCCCAACCCTCCTTTTTCCTCTTCTTGTTTTCCCTTTTCTTCTCGGATCGTTTTCAATGCAATCTCTCCATTTATTATCCCTAAACCCTTTAATTTGGAGCGCGAATAAAACTCTTCGAAGCACAGAGAGCTTTAAATGCGAGTTGGTTGATGCGGTTGCTTTCCATCTCCTCCTCCTTCTTCTTCTTCTTCTTAAGCGCTAAGTTTTCGAAATCCCTAATCTTATATCGTTAAAACCCATTTTCGCTTCTCGATTTTGGATCGACCCTTTTGATTTCCATGGATTTCATCGCGAATCCATTTCGATTTTCTTCATCTTCCTCGCCTTCGTTTGGTAATCTCTTTGAGAGAGTTCGAGACATTTGTTGCTATGCGGTTTCTGCGATTCTTGGCAACGTCTTGTCCGCGATCTTCACTTTTTTCTTCGCCCTAGGTTTGTTTCTCATTCATCTTCTGCATTTCTTCGCATCATTTCTCTGTGTTTATGTGATGATAATCATCCGATCAAGGAGAAGAAGAAGAACAGAAAAACAGGGTTTCTGAAACTTATTTGGATTTCAAGGAAATGAAATCGTTCTTTGTTGTTTCTGGCAGTGGGGACTTTGCTTGGGGCCATGACTGGCGCATTGATTGGCCAAGAAACAGAGAGTGGGTTTGTTAGAGGAGCGGCTGTTGGGGCAATTTCTGGAGCTGTTTTCTCCATTGAAGTCTTTGAATCTTCTCTGGTTCTTTGGCAATCAGATGAATCAGGGATTGGCTGTCTTCTTTATCTGGTGCACAAACTTTGTATCCAAATCTTTTGAGAGTTGAAAAATGGTTTCTCTGGTAATCCAACATTAATTTTGTTTGTTATTCTGTATAGATTGATGTCATTGCAAGCCTCCTAAGCGGACGACTCGTTCGAGAACGGATTGGTCCAGCCATATTGAGCGCAGTTCAAAGTCAGGTAGCTTTGCAATGCCATTGATGAATTGTATAGTTGTAGCTTGATTTAGAATGATGAAACTCATGTTCTGGTTTTGGTGTGAATCAGATGGGTGCTACAGAGACGAGCTTTGACGACATCCCAAACATCTTCGATACGAGTAGCGCAAAAGGATTGCCTGGGGACTCGGTCGAGAAAATTCCCAAGATCTTAGTATCTAAGAACAACAGTGTAGATGCTTACGGCGAGCGAGTCTGTTGTTCTGTTTGCCTTCAGGTTAGTCTCTAACTTTTGAATCTTCATACCAAATCGTCGTCGAAATGGCTACTTAATCGTATTTTCGGGTCGTATTTTCCCAGGACTTTCAACTAGGAGAGACTGTAAGAAGTTTACCATATTGCCATCACATGTTCCATTTGCCCTGCATTGATAAATGGCTTCTTACTCATGGCTCTTGCCCTTTATGTAGAAGGGATCTGTAATATTTTTCCACTACTACTACTGTCTTAACTTGCCCATGTAAATTACAAAATCCGCGAAAAATTTCCTTATTTTTCGCTAAAACTCGAGTTGGATCATTGCTTCAGTTGTTCGAACAGGGGCATTCGTAACATACTGAGGCAATCGATCGTCACCGATGTATAAAAATTTTGAGTAATTATAGCTTTATATTGCTCTTGTGAATAATCCATATTCCTCTTCTACTGAT

mRNA sequence

AGCACCGAACCCCCCACAGCCTCGAAATCTCCGAAAGGAAAATAAGAAATGTAAGAACATCAAAGTTAAAAAAAAGTAAAAAAAAGAAAAAACAACGGAGGAAATTGGTGACGGTGGAGCCACTTGATCGGCGGTGGATTTGTGGAGGAGGAGGAGCGAGAAGATGGCATTGGTATGGCGATCTCGAATCCTGTTTGATTTGGGGTTAAAGCCATTTTAGATGAATCTGGAATTGGCATTGCAAATTGTTAGGGTTTGTTGTGGCCCAATTAATTACCCTGAACTACACGCTGAAGCAAGCCATCCCCAACCCTCCTTTTTCCTCTTCTTGTTTTCCCTTTTCTTCTCGGATCGTTTTCAATGCAATCTCTCCATTTATTATCCCTAAACCCTTTAATTTGGAGCGCGAATAAAACTCTTCGAAGCACAGAGAGCTTTAAATGCGAGTTGGTTGATGCGGTTGCTTTCCATCTCCTCCTCCTTCTTCTTCTTCTTCTTAAGCGCTAAGTTTTCGAAATCCCTAATCTTATATCGTTAAAACCCATTTTCGCTTCTCGATTTTGGATCGACCCTTTTGATTTCCATGGATTTCATCGCGAATCCATTTCGATTTTCTTCATCTTCCTCGCCTTCGTTTGGTAATCTCTTTGAGAGAGTTCGAGACATTTGTTGCTATGCGGTTTCTGCGATTCTTGGCAACGTCTTGTCCGCGATCTTCACTTTTTTCTTCGCCCTAGTGGGGACTTTGCTTGGGGCCATGACTGGCGCATTGATTGGCCAAGAAACAGAGAGTGGGTTTGTTAGAGGAGCGGCTGTTGGGGCAATTTCTGGAGCTGTTTTCTCCATTGAAGTCTTTGAATCTTCTCTGGTTCTTTGGCAATCAGATGAATCAGGGATTGGCTGTCTTCTTTATCTGATTGATGTCATTGCAAGCCTCCTAAGCGGACGACTCGTTCGAGAACGGATTGGTCCAGCCATATTGAGCGCAGTTCAAAGTCAGATGGGTGCTACAGAGACGAGCTTTGACGACATCCCAAACATCTTCGATACGAGTAGCGCAAAAGGATTGCCTGGGGACTCGGTCGAGAAAATTCCCAAGATCTTAGTATCTAAGAACAACAGTGTAGATGCTTACGGCGAGCGAGTCTGTTGTTCTGTTTGCCTTCAGGACTTTCAACTAGGAGAGACTGTAAGAAGTTTACCATATTGCCATCACATGTTCCATTTGCCCTGCATTGATAAATGGCTTCTTACTCATGGCTCTTGCCCTTTATGTAGAAGGGATCTGTAATATTTTTCCACTACTACTACTGTCTTAACTTGCCCATGTAAATTACAAAATCCGCGAAAAATTTCCTTATTTTTCGCTAAAACTCGAGTTGGATCATTGCTTCAGTTGTTCGAACAGGGGCATTCGTAACATACTGAGGCAATCGATCGTCACCGATGTATAAAAATTTTGAGTAATTATAGCTTTATATTGCTCTTGTGAATAATCCATATTCCTCTTCTACTGAT

Coding sequence (CDS)

ATGGATTTCATCGCGAATCCATTTCGATTTTCTTCATCTTCCTCGCCTTCGTTTGGTAATCTCTTTGAGAGAGTTCGAGACATTTGTTGCTATGCGGTTTCTGCGATTCTTGGCAACGTCTTGTCCGCGATCTTCACTTTTTTCTTCGCCCTAGTGGGGACTTTGCTTGGGGCCATGACTGGCGCATTGATTGGCCAAGAAACAGAGAGTGGGTTTGTTAGAGGAGCGGCTGTTGGGGCAATTTCTGGAGCTGTTTTCTCCATTGAAGTCTTTGAATCTTCTCTGGTTCTTTGGCAATCAGATGAATCAGGGATTGGCTGTCTTCTTTATCTGATTGATGTCATTGCAAGCCTCCTAAGCGGACGACTCGTTCGAGAACGGATTGGTCCAGCCATATTGAGCGCAGTTCAAAGTCAGATGGGTGCTACAGAGACGAGCTTTGACGACATCCCAAACATCTTCGATACGAGTAGCGCAAAAGGATTGCCTGGGGACTCGGTCGAGAAAATTCCCAAGATCTTAGTATCTAAGAACAACAGTGTAGATGCTTACGGCGAGCGAGTCTGTTGTTCTGTTTGCCTTCAGGACTTTCAACTAGGAGAGACTGTAAGAAGTTTACCATATTGCCATCACATGTTCCATTTGCCCTGCATTGATAAATGGCTTCTTACTCATGGCTCTTGCCCTTTATGTAGAAGGGATCTGTAA

Protein sequence

MDFIANPFRFSSSSSPSFGNLFERVRDICCYAVSAILGNVLSAIFTFFFALVGTLLGAMTGALIGQETESGFVRGAAVGAISGAVFSIEVFESSLVLWQSDESGIGCLLYLIDVIASLLSGRLVRERIGPAILSAVQSQMGATETSFDDIPNIFDTSSAKGLPGDSVEKIPKILVSKNNSVDAYGERVCCSVCLQDFQLGETVRSLPYCHHMFHLPCIDKWLLTHGSCPLCRRDL

Homology

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BLAST of CmoCh16G013020 vs. ExPASy Swiss-Prot
Match: Q8GT74 (NEP1-interacting protein 2 OS=Arabidopsis thaliana OX=3702 GN=NIP2 PE=1 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 1.1e-95
Identity = 173/236 (73.31%), Postives = 199/236 (84.32%), Query Frame = 0


Query: 5   ANPFRFSS-----SSSPSFGNLFERVRDICCYAVSAILGNVLSAIFTFFFALVGTLLGAM 64
           ++ +RF S     SSSPS GN  ER++D C + VSA+LG ++SAI TFFFALVGTLLGA+
Sbjct: 6   SSSYRFQSGSYPLSSSPSLGNFVERIKDACHFLVSAVLGTIISAILTFFFALVGTLLGAL 65

Query: 65  TGALIGQETESGFVRGAAVGAISGAVFSIEVFESSLVLWQSDESGIGCLLYLIDVIASLL 124
           TGALIGQETESGF+RGAA+GAISGAVFSIEVFESSL LW+SDESG GC LYLIDVI SLL
Sbjct: 66  TGALIGQETESGFIRGAAIGAISGAVFSIEVFESSLDLWKSDESGFGCFLYLIDVIVSLL 125

Query: 125 SGRLVRERIGPAILSAVQSQMGATETSFDDIPNIFDTSSAKGLPGDSVEKIPKILVSKNN 184
           SGRLVRERIGPA+LSAVQSQMGA +T+FDD  ++FDT  +KGL GD VEKIPK+ ++ NN
Sbjct: 126 SGRLVRERIGPAMLSAVQSQMGAVDTAFDDHTSLFDTGGSKGLTGDLVEKIPKMTITGNN 185

Query: 185 SVDAYGERVCCSVCLQDFQLGETVRSLPYCHHMFHLPCIDKWLLTHGSCPLCRRDL 236
           + DA      CSVCLQDFQLGETVRSLP+CHHMFHLPCID WLL HGSCP+CRRD+
Sbjct: 186 NTDASENTDSCSVCLQDFQLGETVRSLPHCHHMFHLPCIDNWLLRHGSCPMCRRDI 241

[Close]

BLAST of CmoCh16G013020 vs. ExPASy Swiss-Prot
Match: Q8GT75 (NEP1-interacting protein 1 OS=Arabidopsis thaliana OX=3702 GN=NIP1 PE=1 SV=2)

HSP 1 Score: 343.2 bits (879), Expect = 2.3e-93
Identity = 165/223 (73.99%), Postives = 194/223 (87.00%), Query Frame = 0


Query: 13  SSSPSFGNLFERVRDICCYAVSAILGNVLSAIFTFFFALVGTLLGAMTGALIGQETESGF 72
           SS PS  N  ER++D C + +SA+LG +LSA+ TFFFALVGTLLGA+TGALIGQETESGF
Sbjct: 14  SSCPSLENFIERIKDACRFTLSAVLGTILSAVLTFFFALVGTLLGALTGALIGQETESGF 73

Query: 73  VRGAAVGAISGAVFSIEVFESSLVLWQSDESGIGCLLYLIDVIASLLSGRLVRERIGPAI 132
           +RGAAVGAISGAVFSIEVFESSLVLW+S+ES  GCLLYLIDVI SL+SGRLVRERIGPA+
Sbjct: 74  IRGAAVGAISGAVFSIEVFESSLVLWKSNESRFGCLLYLIDVIVSLISGRLVRERIGPAM 133

Query: 133 LSAVQSQMGATETSFDDIPNIFDTSSAKGLPGDSVEKIPKILVSKNNSVDAYGERVCCSV 192
           LSAVQSQMGA +++F+++ +IFDT  +KGL GD V+KIPKI ++  N++DA G +  CSV
Sbjct: 134 LSAVQSQMGAVDSTFEELSSIFDTGGSKGLTGDLVDKIPKIKITGKNNLDASGNKDSCSV 193

Query: 193 CLQDFQLGETVRSLPYCHHMFHLPCIDKWLLTHGSCPLCRRDL 236
           CLQDFQLGETVRSLP+CHHMFHLPCID WL  HGSCP+CRRDL
Sbjct: 194 CLQDFQLGETVRSLPHCHHMFHLPCIDNWLFRHGSCPMCRRDL 236

[Close]

BLAST of CmoCh16G013020 vs. ExPASy Swiss-Prot
Match: Q9FKX5 (NEP1-interacting protein-like 1 OS=Arabidopsis thaliana OX=3702 GN=ATL27 PE=2 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 1.9e-87
Identity = 163/216 (75.46%), Postives = 186/216 (86.11%), Query Frame = 0


Query: 20  NLFERVRDICCYAVSAILGNVLSAIFTFFFALVGTLLGAMTGALIGQETESGFVRGAAVG 79
           ++  R++D   +AVSA+L N+ SA+FTFFFALVGTLLGA+TGALIGQETESGF+RGAAVG
Sbjct: 11  SVLHRIKDSFHFAVSALLANLFSALFTFFFALVGTLLGALTGALIGQETESGFIRGAAVG 70

Query: 80  AISGAVFSIEVFESSLVLWQSDESGIGCLLYLIDVIASLLSGRLVRERIGPAILSAVQSQ 139
           AISGAVFSIEVFESSL+LWQSDESGIGCLLYLIDVIASLLSGRLVRERIGPA+LSAVQSQ
Sbjct: 71  AISGAVFSIEVFESSLLLWQSDESGIGCLLYLIDVIASLLSGRLVRERIGPAMLSAVQSQ 130

Query: 140 MGATETSFDDIPNIFDTSSAKGLPGDSVEKIPKILVSKNNSVDAYGERVCCSVCLQDFQL 199
           MGA E+ F D  +IFDT+ +KGL GDS+ +IPK+ ++     D   E V CSVCLQDFQ+
Sbjct: 131 MGAVESQFQDHTDIFDTAISKGLTGDSLNRIPKVRIT-----DTSPEIVSCSVCLQDFQV 190

Query: 200 GETVRSLPYCHHMFHLPCIDKWLLTHGSCPLCRRDL 236
           GETVRSLP+CHHMFHLPCIDKWL  H SCPLCRR L
Sbjct: 191 GETVRSLPHCHHMFHLPCIDKWLRRHASCPLCRRHL 221

[Close]

BLAST of CmoCh16G013020 vs. ExPASy Swiss-Prot
Match: Q8LBA0 (NEP1-interacting protein-like 2 OS=Arabidopsis thaliana OX=3702 GN=ATL24 PE=1 SV=2)

HSP 1 Score: 160.6 bits (405), Expect = 2.1e-38
Identity = 80/211 (37.91%), Postives = 127/211 (60.19%), Query Frame = 0


Query: 23  ERVRDICCYAVSAILGNVLSAIFTFFFALVGTLLGAMTGALIGQETESGFVRGAAVGAIS 82
           E++ D     VS ++  V S   T  FA+ G   GA+TGA+ G+  + G +RGAA+GA++
Sbjct: 12  EQIADSTIDTVSRLIAGVFSGALTGIFAMAGAFTGAVTGAVAGRAAQYGVLRGAALGAVA 71

Query: 83  GAVFSIEVFESSLVLWQSDESGIGCLLYLIDVIASLLSGRLVRERIGPAILSAVQSQMGA 142
           GA+ S+EV E+S   W  + SG      + D +  L  GRLV E++   ++++   Q+  
Sbjct: 72  GAILSVEVLEASRAYWYLELSGSRGPSSMADFVEQLFRGRLVDEQLMSTMINSHHWQLRI 131

Query: 143 TETSFDDIPNIFDTSSAKGLPGDSVEKIPKILVSKNNSVDAYGERVCCSVCLQDFQLGET 202
           ++ S+++  +++    A+GL GDS+ K+P  ++S   S     +   C++CLQD + GE 
Sbjct: 132 SDVSYEEREDVYGELEARGLSGDSLRKLPCYIMS---SEMVRRQVTHCTICLQDIKTGEI 191

Query: 203 VRSLPYCHHMFHLPCIDKWLLTHGSCPLCRR 234
            RSLP C H FHL C+DKWL+ HGSCP+CR+
Sbjct: 192 TRSLPKCDHTFHLVCVDKWLIRHGSCPICRQ 219

[Close]

BLAST of CmoCh16G013020 vs. ExPASy Swiss-Prot
Match: Q9SRQ8 (RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2)

HSP 1 Score: 80.5 bits (197), Expect = 2.8e-14
Identity = 39/100 (39.00%), Postives = 53/100 (53.00%), Query Frame = 0


Query: 133 LSAVQSQMGATETSFDDIPNIFDTSSAKGLPGDSVEKIPKILVSKNNSVDAYGERVCCSV 192
           +S+  +  G    + +   N   T    G  G     I  I V K   +D + E   CSV
Sbjct: 102 ISSDYTWQGTNNNNNNGATNPNQTIGGGGGDGLDESLIKSITVYKYRKMDGFVESSDCSV 161

Query: 193 CLQDFQLGETVRSLPYCHHMFHLPCIDKWLLTHGSCPLCR 233
           CL +FQ  E++R LP C+H FH+PCID WL +H +CPLCR
Sbjct: 162 CLSEFQENESLRLLPKCNHAFHVPCIDTWLKSHSNCPLCR 201

[Close]

BLAST of CmoCh16G013020 vs. ExPASy TrEMBL
Match: A0A6J1HJZ0 (NEP1-interacting protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111465207 PE=4 SV=1)

HSP 1 Score: 467.6 bits (1202), Expect = 3.0e-128
Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 0


Query: 1   MDFIANPFRFSSSSSPSFGNLFERVRDICCYAVSAILGNVLSAIFTFFFALVGTLLGAMT 60
           MDFIANPFRFSSSSSPSFGNLFERVRDICCYAVSAILGNVLSAIFTFFFALVGTLLGAMT
Sbjct: 1   MDFIANPFRFSSSSSPSFGNLFERVRDICCYAVSAILGNVLSAIFTFFFALVGTLLGAMT 60

Query: 61  GALIGQETESGFVRGAAVGAISGAVFSIEVFESSLVLWQSDESGIGCLLYLIDVIASLLS 120
           GALIGQETESGFVRGAAVGAISGAVFSIEVFESSLVLWQSDESGIGCLLYLIDVIASLLS
Sbjct: 61  GALIGQETESGFVRGAAVGAISGAVFSIEVFESSLVLWQSDESGIGCLLYLIDVIASLLS 120

Query: 121 GRLVRERIGPAILSAVQSQMGATETSFDDIPNIFDTSSAKGLPGDSVEKIPKILVSKNNS 180
           GRLVRERIGPAILSAVQSQMGATETSFDDIPNIFDTSSAKGLPGDSVEKIPKILVSKNNS
Sbjct: 121 GRLVRERIGPAILSAVQSQMGATETSFDDIPNIFDTSSAKGLPGDSVEKIPKILVSKNNS 180

Query: 181 VDAYGERVCCSVCLQDFQLGETVRSLPYCHHMFHLPCIDKWLLTHGSCPLCRRDL 236
           VDAYGERVCCSVCLQDFQLGETVRSLPYCHHMFHLPCIDKWLLTHGSCPLCRRDL
Sbjct: 181 VDAYGERVCCSVCLQDFQLGETVRSLPYCHHMFHLPCIDKWLLTHGSCPLCRRDL 235

[Close]

BLAST of CmoCh16G013020 vs. ExPASy TrEMBL
Match: A0A6J1EC93 (NEP1-interacting protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111431224 PE=4 SV=1)

HSP 1 Score: 467.6 bits (1202), Expect = 3.0e-128
Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 0


Query: 1   MDFIANPFRFSSSSSPSFGNLFERVRDICCYAVSAILGNVLSAIFTFFFALVGTLLGAMT 60
           MDFIANPFRFSSSSSPSFGNLFERVRDICCYAVSAILGNVLSAIFTFFFALVGTLLGAMT
Sbjct: 1   MDFIANPFRFSSSSSPSFGNLFERVRDICCYAVSAILGNVLSAIFTFFFALVGTLLGAMT 60

Query: 61  GALIGQETESGFVRGAAVGAISGAVFSIEVFESSLVLWQSDESGIGCLLYLIDVIASLLS 120
           GALIGQETESGFVRGAAVGAISGAVFSIEVFESSLVLWQSDESGIGCLLYLIDVIASLLS
Sbjct: 61  GALIGQETESGFVRGAAVGAISGAVFSIEVFESSLVLWQSDESGIGCLLYLIDVIASLLS 120

Query: 121 GRLVRERIGPAILSAVQSQMGATETSFDDIPNIFDTSSAKGLPGDSVEKIPKILVSKNNS 180
           GRLVRERIGPAILSAVQSQMGATETSFDDIPNIFDTSSAKGLPGDSVEKIPKILVSKNNS
Sbjct: 121 GRLVRERIGPAILSAVQSQMGATETSFDDIPNIFDTSSAKGLPGDSVEKIPKILVSKNNS 180

Query: 181 VDAYGERVCCSVCLQDFQLGETVRSLPYCHHMFHLPCIDKWLLTHGSCPLCRRDL 236
           VDAYGERVCCSVCLQDFQLGETVRSLPYCHHMFHLPCIDKWLLTHGSCPLCRRDL
Sbjct: 181 VDAYGERVCCSVCLQDFQLGETVRSLPYCHHMFHLPCIDKWLLTHGSCPLCRRDL 235

[Close]

BLAST of CmoCh16G013020 vs. ExPASy TrEMBL
Match: A0A5A7UHC4 (NEP1-interacting protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G00490 PE=4 SV=1)

HSP 1 Score: 464.5 bits (1194), Expect = 2.6e-127
Identity = 232/235 (98.72%), Postives = 235/235 (100.00%), Query Frame = 0


Query: 1   MDFIANPFRFSSSSSPSFGNLFERVRDICCYAVSAILGNVLSAIFTFFFALVGTLLGAMT 60
           MDFIANPFRFSSSSSPSFGNLFERVR+ICCYAVSAILGN+LSAIFTFFFALVGTLLGAMT
Sbjct: 1   MDFIANPFRFSSSSSPSFGNLFERVREICCYAVSAILGNILSAIFTFFFALVGTLLGAMT 60

Query: 61  GALIGQETESGFVRGAAVGAISGAVFSIEVFESSLVLWQSDESGIGCLLYLIDVIASLLS 120
           GALIGQETESGFVRGAAVGAISGAVFSIEVFESSLVLWQSDESGIGCLLYLIDVIASLLS
Sbjct: 61  GALIGQETESGFVRGAAVGAISGAVFSIEVFESSLVLWQSDESGIGCLLYLIDVIASLLS 120

Query: 121 GRLVRERIGPAILSAVQSQMGATETSFDDIPNIFDTSSAKGLPGDSVEKIPKILVSKNNS 180
           GRLVRERIGPAILSAVQSQMGATETSFDDIPNIFDTSSAKGLPGDSVEKIPKI+VSKNNS
Sbjct: 121 GRLVRERIGPAILSAVQSQMGATETSFDDIPNIFDTSSAKGLPGDSVEKIPKIVVSKNNS 180

Query: 181 VDAYGERVCCSVCLQDFQLGETVRSLPYCHHMFHLPCIDKWLLTHGSCPLCRRDL 236
           VDAYGERVCCSVCLQDFQLGETVRSLPYCHHMFHLPCIDKWLLTHGSCPLCRRDL
Sbjct: 181 VDAYGERVCCSVCLQDFQLGETVRSLPYCHHMFHLPCIDKWLLTHGSCPLCRRDL 235

[Close]

BLAST of CmoCh16G013020 vs. ExPASy TrEMBL
Match: A0A0A0L659 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G002560 PE=4 SV=1)

HSP 1 Score: 464.5 bits (1194), Expect = 2.6e-127
Identity = 232/235 (98.72%), Postives = 235/235 (100.00%), Query Frame = 0


Query: 1   MDFIANPFRFSSSSSPSFGNLFERVRDICCYAVSAILGNVLSAIFTFFFALVGTLLGAMT 60
           MDFIANPFRFSSSSSPSFGNLFERVR+ICCYAVSAILGN+LSAIFTFFFALVGTLLGAMT
Sbjct: 1   MDFIANPFRFSSSSSPSFGNLFERVREICCYAVSAILGNILSAIFTFFFALVGTLLGAMT 60

Query: 61  GALIGQETESGFVRGAAVGAISGAVFSIEVFESSLVLWQSDESGIGCLLYLIDVIASLLS 120
           GALIGQETESGFVRGAAVGAISGAVFSIEVFESSLVLWQSDESGIGCLLYLIDVIASLLS
Sbjct: 61  GALIGQETESGFVRGAAVGAISGAVFSIEVFESSLVLWQSDESGIGCLLYLIDVIASLLS 120

Query: 121 GRLVRERIGPAILSAVQSQMGATETSFDDIPNIFDTSSAKGLPGDSVEKIPKILVSKNNS 180
           GRLVRERIGPAILSAVQSQMGATETSFDDIPNIFDTSSAKGLPGDSVEKIPKI+VSKNNS
Sbjct: 121 GRLVRERIGPAILSAVQSQMGATETSFDDIPNIFDTSSAKGLPGDSVEKIPKIVVSKNNS 180

Query: 181 VDAYGERVCCSVCLQDFQLGETVRSLPYCHHMFHLPCIDKWLLTHGSCPLCRRDL 236
           VDAYGERVCCSVCLQDFQLGETVRSLPYCHHMFHLPCIDKWLLTHGSCPLCRRDL
Sbjct: 181 VDAYGERVCCSVCLQDFQLGETVRSLPYCHHMFHLPCIDKWLLTHGSCPLCRRDL 235

[Close]

BLAST of CmoCh16G013020 vs. ExPASy TrEMBL
Match: A0A1S3BJV1 (NEP1-interacting protein 2-like OS=Cucumis melo OX=3656 GN=LOC103490668 PE=4 SV=1)

HSP 1 Score: 464.5 bits (1194), Expect = 2.6e-127
Identity = 232/235 (98.72%), Postives = 235/235 (100.00%), Query Frame = 0


Query: 1   MDFIANPFRFSSSSSPSFGNLFERVRDICCYAVSAILGNVLSAIFTFFFALVGTLLGAMT 60
           MDFIANPFRFSSSSSPSFGNLFERVR+ICCYAVSAILGN+LSAIFTFFFALVGTLLGAMT
Sbjct: 1   MDFIANPFRFSSSSSPSFGNLFERVREICCYAVSAILGNILSAIFTFFFALVGTLLGAMT 60

Query: 61  GALIGQETESGFVRGAAVGAISGAVFSIEVFESSLVLWQSDESGIGCLLYLIDVIASLLS 120
           GALIGQETESGFVRGAAVGAISGAVFSIEVFESSLVLWQSDESGIGCLLYLIDVIASLLS
Sbjct: 61  GALIGQETESGFVRGAAVGAISGAVFSIEVFESSLVLWQSDESGIGCLLYLIDVIASLLS 120

Query: 121 GRLVRERIGPAILSAVQSQMGATETSFDDIPNIFDTSSAKGLPGDSVEKIPKILVSKNNS 180
           GRLVRERIGPAILSAVQSQMGATETSFDDIPNIFDTSSAKGLPGDSVEKIPKI+VSKNNS
Sbjct: 121 GRLVRERIGPAILSAVQSQMGATETSFDDIPNIFDTSSAKGLPGDSVEKIPKIVVSKNNS 180

Query: 181 VDAYGERVCCSVCLQDFQLGETVRSLPYCHHMFHLPCIDKWLLTHGSCPLCRRDL 236
           VDAYGERVCCSVCLQDFQLGETVRSLPYCHHMFHLPCIDKWLLTHGSCPLCRRDL
Sbjct: 181 VDAYGERVCCSVCLQDFQLGETVRSLPYCHHMFHLPCIDKWLLTHGSCPLCRRDL 235

[Close]

BLAST of CmoCh16G013020 vs. TAIR 10
Match: AT2G17730.1 (NEP-interacting protein 2 )

HSP 1 Score: 350.9 bits (899), Expect = 7.9e-97
Identity = 173/236 (73.31%), Postives = 199/236 (84.32%), Query Frame = 0


Query: 5   ANPFRFSS-----SSSPSFGNLFERVRDICCYAVSAILGNVLSAIFTFFFALVGTLLGAM 64
           ++ +RF S     SSSPS GN  ER++D C + VSA+LG ++SAI TFFFALVGTLLGA+
Sbjct: 6   SSSYRFQSGSYPLSSSPSLGNFVERIKDACHFLVSAVLGTIISAILTFFFALVGTLLGAL 65

Query: 65  TGALIGQETESGFVRGAAVGAISGAVFSIEVFESSLVLWQSDESGIGCLLYLIDVIASLL 124
           TGALIGQETESGF+RGAA+GAISGAVFSIEVFESSL LW+SDESG GC LYLIDVI SLL
Sbjct: 66  TGALIGQETESGFIRGAAIGAISGAVFSIEVFESSLDLWKSDESGFGCFLYLIDVIVSLL 125

Query: 125 SGRLVRERIGPAILSAVQSQMGATETSFDDIPNIFDTSSAKGLPGDSVEKIPKILVSKNN 184
           SGRLVRERIGPA+LSAVQSQMGA +T+FDD  ++FDT  +KGL GD VEKIPK+ ++ NN
Sbjct: 126 SGRLVRERIGPAMLSAVQSQMGAVDTAFDDHTSLFDTGGSKGLTGDLVEKIPKMTITGNN 185

Query: 185 SVDAYGERVCCSVCLQDFQLGETVRSLPYCHHMFHLPCIDKWLLTHGSCPLCRRDL 236
           + DA      CSVCLQDFQLGETVRSLP+CHHMFHLPCID WLL HGSCP+CRRD+
Sbjct: 186 NTDASENTDSCSVCLQDFQLGETVRSLPHCHHMFHLPCIDNWLLRHGSCPMCRRDI 241

[Close]

BLAST of CmoCh16G013020 vs. TAIR 10
Match: AT4G35840.1 (RING/U-box superfamily protein )

HSP 1 Score: 343.2 bits (879), Expect = 1.7e-94
Identity = 165/223 (73.99%), Postives = 194/223 (87.00%), Query Frame = 0


Query: 13  SSSPSFGNLFERVRDICCYAVSAILGNVLSAIFTFFFALVGTLLGAMTGALIGQETESGF 72
           SS PS  N  ER++D C + +SA+LG +LSA+ TFFFALVGTLLGA+TGALIGQETESGF
Sbjct: 14  SSCPSLENFIERIKDACRFTLSAVLGTILSAVLTFFFALVGTLLGALTGALIGQETESGF 73

Query: 73  VRGAAVGAISGAVFSIEVFESSLVLWQSDESGIGCLLYLIDVIASLLSGRLVRERIGPAI 132
           +RGAAVGAISGAVFSIEVFESSLVLW+S+ES  GCLLYLIDVI SL+SGRLVRERIGPA+
Sbjct: 74  IRGAAVGAISGAVFSIEVFESSLVLWKSNESRFGCLLYLIDVIVSLISGRLVRERIGPAM 133

Query: 133 LSAVQSQMGATETSFDDIPNIFDTSSAKGLPGDSVEKIPKILVSKNNSVDAYGERVCCSV 192
           LSAVQSQMGA +++F+++ +IFDT  +KGL GD V+KIPKI ++  N++DA G +  CSV
Sbjct: 134 LSAVQSQMGAVDSTFEELSSIFDTGGSKGLTGDLVDKIPKIKITGKNNLDASGNKDSCSV 193

Query: 193 CLQDFQLGETVRSLPYCHHMFHLPCIDKWLLTHGSCPLCRRDL 236
           CLQDFQLGETVRSLP+CHHMFHLPCID WL  HGSCP+CRRDL
Sbjct: 194 CLQDFQLGETVRSLPHCHHMFHLPCIDNWLFRHGSCPMCRRDL 236

[Close]

BLAST of CmoCh16G013020 vs. TAIR 10
Match: AT2G17730.2 (NEP-interacting protein 2 )

HSP 1 Score: 328.9 bits (842), Expect = 3.2e-90
Identity = 165/226 (73.01%), Postives = 189/226 (83.63%), Query Frame = 0


Query: 5   ANPFRFSS-----SSSPSFGNLFERVRDICCYAVSAILGNVLSAIFTFFFALVGTLLGAM 64
           ++ +RF S     SSSPS GN  ER++D C + VSA+LG ++SAI TFFFALVGTLLGA+
Sbjct: 6   SSSYRFQSGSYPLSSSPSLGNFVERIKDACHFLVSAVLGTIISAILTFFFALVGTLLGAL 65

Query: 65  TGALIGQETESGFVRGAAVGAISGAVFSIEVFESSLVLWQSDESGIGCLLYLIDVIASLL 124
           TGALIGQETESGF+RGAA+GAISGAVFSIEVFESSL LW+SDESG GC LYLIDVI SLL
Sbjct: 66  TGALIGQETESGFIRGAAIGAISGAVFSIEVFESSLDLWKSDESGFGCFLYLIDVIVSLL 125

Query: 125 SGRLVRERIGPAILSAVQSQMGATETSFDDIPNIFDTSSAKGLPGDSVEKIPKILVSKNN 184
           SGRLVRERIGPA+LSAVQSQMGA +T+FDD  ++FDT  +KGL GD VEKIPK+ ++ NN
Sbjct: 126 SGRLVRERIGPAMLSAVQSQMGAVDTAFDDHTSLFDTGGSKGLTGDLVEKIPKMTITGNN 185

Query: 185 SVDAYGERVCCSVCLQDFQLGETVRSLPYCHHMFHLPCIDKWLLTH 226
           + DA      CSVCLQDFQLGETVRSLP+CHHMFHLPCID WLL H
Sbjct: 186 NTDASENTDSCSVCLQDFQLGETVRSLPHCHHMFHLPCIDNWLLRH 231

[Close]

BLAST of CmoCh16G013020 vs. TAIR 10
Match: AT5G66070.1 (RING/U-box superfamily protein )

HSP 1 Score: 323.6 bits (828), Expect = 1.4e-88
Identity = 163/216 (75.46%), Postives = 186/216 (86.11%), Query Frame = 0


Query: 20  NLFERVRDICCYAVSAILGNVLSAIFTFFFALVGTLLGAMTGALIGQETESGFVRGAAVG 79
           ++  R++D   +AVSA+L N+ SA+FTFFFALVGTLLGA+TGALIGQETESGF+RGAAVG
Sbjct: 11  SVLHRIKDSFHFAVSALLANLFSALFTFFFALVGTLLGALTGALIGQETESGFIRGAAVG 70

Query: 80  AISGAVFSIEVFESSLVLWQSDESGIGCLLYLIDVIASLLSGRLVRERIGPAILSAVQSQ 139
           AISGAVFSIEVFESSL+LWQSDESGIGCLLYLIDVIASLLSGRLVRERIGPA+LSAVQSQ
Sbjct: 71  AISGAVFSIEVFESSLLLWQSDESGIGCLLYLIDVIASLLSGRLVRERIGPAMLSAVQSQ 130

Query: 140 MGATETSFDDIPNIFDTSSAKGLPGDSVEKIPKILVSKNNSVDAYGERVCCSVCLQDFQL 199
           MGA E+ F D  +IFDT+ +KGL GDS+ +IPK+ ++     D   E V CSVCLQDFQ+
Sbjct: 131 MGAVESQFQDHTDIFDTAISKGLTGDSLNRIPKVRIT-----DTSPEIVSCSVCLQDFQV 190

Query: 200 GETVRSLPYCHHMFHLPCIDKWLLTHGSCPLCRRDL 236
           GETVRSLP+CHHMFHLPCIDKWL  H SCPLCRR L
Sbjct: 191 GETVRSLPHCHHMFHLPCIDKWLRRHASCPLCRRHL 221

[Close]

BLAST of CmoCh16G013020 vs. TAIR 10
Match: AT5G66070.2 (RING/U-box superfamily protein )

HSP 1 Score: 310.1 bits (793), Expect = 1.6e-84
Identity = 163/240 (67.92%), Postives = 186/240 (77.50%), Query Frame = 0


Query: 20  NLFERVRDICCYAVSAILGNVLSAIFTFFFALVGTLLGAMTGALIGQETESGFVRGAAVG 79
           ++  R++D   +AVSA+L N+ SA+FTFFFALVGTLLGA+TGALIGQETESGF+RGAAVG
Sbjct: 11  SVLHRIKDSFHFAVSALLANLFSALFTFFFALVGTLLGALTGALIGQETESGFIRGAAVG 70

Query: 80  AISGAVFSIEVFESSLVLWQSDESGIGCLLYLIDVIASLLSGRLVRERIGPAILSAVQS- 139
           AISGAVFSIEVFESSL+LWQSDESGIGCLLYLIDVIASLLSGRLVRERIGPA+LSAVQS 
Sbjct: 71  AISGAVFSIEVFESSLLLWQSDESGIGCLLYLIDVIASLLSGRLVRERIGPAMLSAVQSQ 130

Query: 140 -----------------------QMGATETSFDDIPNIFDTSSAKGLPGDSVEKIPKILV 199
                                  QMGA E+ F D  +IFDT+ +KGL GDS+ +IPK+ +
Sbjct: 131 VQLPFLFFDASFIILLNFCINNKQMGAVESQFQDHTDIFDTAISKGLTGDSLNRIPKVRI 190

Query: 200 SKNNSVDAYGERVCCSVCLQDFQLGETVRSLPYCHHMFHLPCIDKWLLTHGSCPLCRRDL 236
           +     D   E V CSVCLQDFQ+GETVRSLP+CHHMFHLPCIDKWL  H SCPLCRR L
Sbjct: 191 T-----DTSPEIVSCSVCLQDFQVGETVRSLPHCHHMFHLPCIDKWLRRHASCPLCRRHL 245

The following BLAST results are available for this feature:

BLAST of CmoCh16G013020 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GT74	1.1e-95	73.31	NEP1-interacting protein 2 OS=Arabidopsis thaliana OX=3702 GN=NIP2 PE=1 SV=1	[more]
Q8GT75	2.3e-93	73.99	NEP1-interacting protein 1 OS=Arabidopsis thaliana OX=3702 GN=NIP1 PE=1 SV=2	[more]
Q9FKX5	1.9e-87	75.46	NEP1-interacting protein-like 1 OS=Arabidopsis thaliana OX=3702 GN=ATL27 PE=2 SV...	[more]
Q8LBA0	2.1e-38	37.91	NEP1-interacting protein-like 2 OS=Arabidopsis thaliana OX=3702 GN=ATL24 PE=1 SV...	[more]
Q9SRQ8	2.8e-14	39.00	RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2	[more]

BLAST of CmoCh16G013020 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HJZ0	3.0e-128	100.00	NEP1-interacting protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111465207 PE=4...	[more]
A0A6J1EC93	3.0e-128	100.00	NEP1-interacting protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111431224 PE=4 SV...	[more]
A0A5A7UHC4	2.6e-127	98.72	NEP1-interacting protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A0A0L659	2.6e-127	98.72	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G002560 P...	[more]
A0A1S3BJV1	2.6e-127	98.72	NEP1-interacting protein 2-like OS=Cucumis melo OX=3656 GN=LOC103490668 PE=4 SV=...	[more]

BLAST of CmoCh16G013020 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G17730.1	7.9e-97	73.31	NEP-interacting protein 2	[more]
AT4G35840.1	1.7e-94	73.99	RING/U-box superfamily protein	[more]
AT2G17730.2	3.2e-90	73.01	NEP-interacting protein 2	[more]
AT5G66070.1	1.4e-88	75.46	RING/U-box superfamily protein	[more]
AT5G66070.2	1.6e-84	67.92	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 190..231 e-value: 1.3E-6 score: 38.0
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 190..232 e-value: 7.4E-11 score: 42.2
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 190..232 score: 11.825393
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 152..235 e-value: 9.4E-22 score: 78.5
None	No IPR available	PANTHER	PTHR46151:SF11	NEP1-INTERACTING PROTEIN-LIKE 1	coord: 9..235
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 189..232 e-value: 1.85896E-18 score: 73.8753
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 177..235
IPR044523	RING domain-containing protein NIP1/2-like	PANTHER	PTHR46151	NEP1-INTERACTING PROTEIN-LIKE 2	coord: 9..235

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh16G013020.1	CmoCh16G013020.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane