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CmoCh16G012910 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGAGATACGATAGAGCCATTACGGTATTCTCACCGGACGGTCATCTCTTCCAAGTAGAATACGCTCTCGAGGCCGTCCGTAAGGGCAACGCCGCCGTCGGGGTTCGCGGTTCCGACACCGTCGTCCTTGGCGTCGAGAAGAAATCCACCCCCAAACTCCAAGATTCTAGGTCACTCTCTCAATTTCTTTTCCTCTTTAACGAATTCATCCTACTTCTAGATTGTTAGAATCAGGATATTGAGTTACTGTCAGAACCTCGTATCGAGTTTGATTTGATTTGATTTGATTTGACCTAATTTTTGGGTTGGAAGTTTCTTGTTAATGGTCGAATTTTAGGGTTATTGAAATGGCGATTGTTGTTTCTATTTGTTTCATATCTGATTTACTGTTTGCAGATCGGTTCGGAAAATTGTGAATCTTGATGATCATATTGCACTTGCTTGTGCTGGACTCAAGGCAGATGCACGAGTTCTGATAAACAGGGCTCGTGTTGAGTGTCAAAGCCATAGGCTTACAGTTGAGGATCCAGTGACTGTTGAGTATATAACGCGATACATTGCAGGGCTTCAGCAGAAGTACACACAGAGTGGTGGAGTAAGGCCATTTGGGCTTTCCACTTTGATTATTGGGTTTGATCCTTACACTGGTGCTCCATCATTGTATCAGACAGATCCTTCTGGGACTTTTTCCTCTTGGAAAGCCAGTGCAACCGGGAGAAATTCAAATTCGATTAGGGAATTTCTTGAGAAGAACTACAAGGAGACTTCTGGGCAAGAAACTGTGAAGCTTGCTATCCGTGCATTGCTCGAGGCAAGTTGTTATAGCTTTTCTTGTTTTCTTTACTTGCACGTTGTAAATAGGGCTGTTACAAAGGGTATCAAAGCTAGACACCGGGCAGTGTGTCAGCGAGGGGGTGGATTGTGAGATCCCCACATTGGTTGGAGATGAGAACGAAACATTCCTTTTAAAAGTGTGGAAACCTCTCCCTAGTAGACGTGTTTTAAAATCGTGAGGCTGATGCGATACGTAACAGGCCAAAGCAGATAATATCTGCTAGCAGTGAGCTTGGGGTGGTGTGCCAGCGAGGACGCTGGCCCCCAAGAGGGTGGATTATGAGATTTCACATCGGTTGGAGAGGAGAATGAAGCATTTCTCATAGGAGTGTGGAAACCTCTCCCTAGTAGACGCGGTTTAAAACCGTGAGGTTGACGGCGATACATAACAGGCCAAAACAAACAATATCTGCTAGCGATGGGTTTGAGCGGTTACAAATTTCTTGCATAGCCAACCTATTCTACTGCAGAATGGATTTTTCAAAGTTAATTGCTTGCATTTATCTCTGTTCCTTGTTTCCAAAAGACATATGGTTTGCATGTAAAGTTCTTTTGGATGATAGAACCTTTGTTTGGTTTCTGAAGTCAAGTAGTTGTTTGACCATGACTTGTAATGGGTGTTTGGTATTTCCTTGATTGAATACAGTAGTTTGTTTACATGAAGCTGCTTTAGTATTTGGTGTGGTGATTGGTTTTGAATCATCTGTGATGCTCGATTATATGAGACTTTTTTACTATTAGCACTCAAAATAAAACTCTGAAATCAATTGCATTGAAAAACAAAACAACTTGTGGCTTTTAGACCTTACAAACAGATGAAATTAGTAAACGATGAAATTAGCATACTCTAAAAATAATAAATTACCACCCATTAAATGATTTAGTGGTCCTAACATTCCTAAAGAAATGGTCTAATACGATCATCTTTAACAATTTCTCTCCTAAACTGATAGCTGAAATGCTTTCAGTTTACTCGTGGTACTACACACAGACTCACGCAGTTTTATGAACGCATCCAGCTTCAGTGGTTTTGTCATAATATCTGCAACTTGTTTTTGTGTGACACAATGCTTCAGCTCAATAACTATCTCTGATCAAATCACGCAAGTCAATGTGTTTTTACTCGGTGATGGAGTTGTGTCTTGGTCCTCAAGAGAAATTGTTAAAGATAGTCATATTAGACCGTTTCTTTAGGGTTGAAATGGTTAGATTAGACCATTTCTTTAGGGATGTTAAGACCATTAAATCATTTAGTGGGTTGTTAATTTATTATTTTTAGAGTTTATAATTTTTACAAACTTCATTTGTTTGTAACGCCTATAAAAGTCGCTAAGTTGTTTTGTTTTTCAATGCAATTGATTTCAGTGTTTCATTTTGAGTTAGTTTGTGTGTGTTCACAACATTTGGTATCAAAGTCATGCCTTTAACTTAGTCATGTCAATAGAATCCTCAAACTTAGTCATGTCAATAGAATTCTCAAATGTCGAACAAAAATGTCGAACAAAGAAGTTGTGAGCCTCGAAGGTATAGTCAAAGTGACTAAGTATCGAACAAAGGGTGTACTTTATTCGAGGGCTCGAGAGAAGGAGTCAAGCCTCGATTAAGGGGAGACTGTTCGAGGGCTCCATAGGCCTCAAGGGAGGCTCTATGGTGTACTTTGTTCGAGGGAGGATTGTTGGGAGGGAGTCCCACATTGGCTAATTAAGGAGAAGATCACGAATTTATAAGTAAGGAATACTATCTCCATTGGTATGAGGCCTTCTGGGAAAACCAAAAGAAAAGGTATGATAGTTTATGCTCAAAGTGAACAATATTATACCATTGTGGAGGTTCGTGATTCAATGTACAAAATGGAAAATAAGTTGTGGTTGTATCATATGACTAATGCTTAATGGTAGGCACATAGCTTGCATGCTTTTTGGTATTCCCTCTCTTGGTTGGGCTGATTTTTGTTTTTGTGGCTCTCCTTTGAACTTTCCTCTGTACTTTCATCCATGGTTCATTCATCGAAGAAAAAATGAATGATTCGGTTACTAAGCACTTAAGGGCACTTAAGGATTTGGACATTTCTTGCTATACTGCGCACATTCTTTGGTGTAACGGGTTATTCCTTACCCTAAGAACCAATTTGATCCTTTGGTGTAACTGGTTATTCCTTTACACAAAAGCTTCTTTGGATCATTGTTTAATCTTCATAGGGCTTAAAACATTAGACGGCAAATGGAAAAGTCATTTTAGAAACAATTCCATAAGGTTTTGGAAAAAATAGGTCACTTTGAGAATTGAGAACACACCCCCAAAAAAAAGAAACAACCTTAAAAAATGAGTACAAAAACACCTTCCAAATCCAAACAACTAGAAATGCCAAAATAGATATAACTATTGCTTTGCATTGACCTCTTCTTGGTTAATTTAGCTGATCTCGAGTAATCGAGCCAACGGCCGTTATGAATATTGGTTCGTGATTTAATGTCCTAAGTTAACATATTCGAGTTTACAATTATTCCTTCATTCTTCAGAGGTATTGCCATAAATATACCAAACGAGTTAAGTGAATTTCTTGAATGTTTATCTGTGGTACTTGGCGATTTACTTCCATCGACTCGACTCAATTTGTAGGTTGTCGAGAGCGGAGGAAAGAACATAGAGGTTGCTGTGATGACAAAGGAACATGGGTTGAAACAATTGGAGGAAGCTGAAATTGATGCCATTGTTGCTGAGATTGAAGCAGAAAAAGCAGCGGCAGAGGCTGCCAAGAAGTCCCGGCCGAAGGAAACATGA ATGGCGAGATACGATAGAGCCATTACGGTATTCTCACCGGACGGTCATCTCTTCCAAGTAGAATACGCTCTCGAGGCCGTCCGTAAGGGCAACGCCGCCGTCGGGGTTCGCGGTTCCGACACCGTCGTCCTTGGCGTCGAGAAGAAATCCACCCCCAAACTCCAAGATTCTAGATCGGTTCGGAAAATTGTGAATCTTGATGATCATATTGCACTTGCTTGTGCTGGACTCAAGGCAGATGCACGAGTTCTGATAAACAGGGCTCGTGTTGAGTGTCAAAGCCATAGGCTTACAGTTGAGGATCCAGTGACTGTTGAGTATATAACGCGATACATTGCAGGGCTTCAGCAGAAGTACACACAGAGTGGTGGAGTAAGGCCATTTGGGCTTTCCACTTTGATTATTGGGTTTGATCCTTACACTGGTGCTCCATCATTGTATCAGACAGATCCTTCTGGGACTTTTTCCTCTTGGAAAGCCAGTGCAACCGGGAGAAATTCAAATTCGATTAGGGAATTTCTTGAGAAGAACTACAAGGAGACTTCTGGGCAAGAAACTGTGAAGCTTGCTATCCGTGCATTGCTCGAGGTTGTCGAGAGCGGAGGAAAGAACATAGAGGTTGCTGTGATGACAAAGGAACATGGGTTGAAACAATTGGAGGAAGCTGAAATTGATGCCATTGTTGCTGAGATTGAAGCAGAAAAAGCAGCGGCAGAGGCTGCCAAGAAGTCCCGGCCGAAGGAAACATGA ATGGCGAGATACGATAGAGCCATTACGGTATTCTCACCGGACGGTCATCTCTTCCAAGTAGAATACGCTCTCGAGGCCGTCCGTAAGGGCAACGCCGCCGTCGGGGTTCGCGGTTCCGACACCGTCGTCCTTGGCGTCGAGAAGAAATCCACCCCCAAACTCCAAGATTCTAGATCGGTTCGGAAAATTGTGAATCTTGATGATCATATTGCACTTGCTTGTGCTGGACTCAAGGCAGATGCACGAGTTCTGATAAACAGGGCTCGTGTTGAGTGTCAAAGCCATAGGCTTACAGTTGAGGATCCAGTGACTGTTGAGTATATAACGCGATACATTGCAGGGCTTCAGCAGAAGTACACACAGAGTGGTGGAGTAAGGCCATTTGGGCTTTCCACTTTGATTATTGGGTTTGATCCTTACACTGGTGCTCCATCATTGTATCAGACAGATCCTTCTGGGACTTTTTCCTCTTGGAAAGCCAGTGCAACCGGGAGAAATTCAAATTCGATTAGGGAATTTCTTGAGAAGAACTACAAGGAGACTTCTGGGCAAGAAACTGTGAAGCTTGCTATCCGTGCATTGCTCGAGGTTGTCGAGAGCGGAGGAAAGAACATAGAGGTTGCTGTGATGACAAAGGAACATGGGTTGAAACAATTGGAGGAAGCTGAAATTGATGCCATTGTTGCTGAGATTGAAGCAGAAAAAGCAGCGGCAGAGGCTGCCAAGAAGTCCCGGCCGAAGGAAACATGA MARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGSDTVVLGVEKKSTPKLQDSRSVRKIVNLDDHIALACAGLKADARVLINRARVECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIIGFDPYTGAPSLYQTDPSGTFSSWKASATGRNSNSIREFLEKNYKETSGQETVKLAIRALLEVVESGGKNIEVAVMTKEHGLKQLEEAEIDAIVAEIEAEKAAAEAAKKSRPKET Homology
BLAST of CmoCh16G012910 vs. ExPASy Swiss-Prot
Match: Q9SXU1 (Proteasome subunit alpha type-7 OS=Cicer arietinum OX=3827 GN=PAD1 PE=2 SV=1) HSP 1 Score: 453.4 bits (1165), Expect = 1.7e-126 Identity = 235/249 (94.38%), Postives = 246/249 (98.80%), Query Frame = 0
BLAST of CmoCh16G012910 vs. ExPASy Swiss-Prot
Match: O24030 (Proteasome subunit alpha type-7 OS=Solanum lycopersicum OX=4081 GN=PAD1 PE=2 SV=1) HSP 1 Score: 451.4 bits (1160), Expect = 6.4e-126 Identity = 232/243 (95.47%), Postives = 241/243 (99.18%), Query Frame = 0
BLAST of CmoCh16G012910 vs. ExPASy Swiss-Prot
Match: A2Z3I9 (Proteasome subunit alpha type-7-B OS=Oryza sativa subsp. indica OX=39946 GN=PAD1 PE=2 SV=1) HSP 1 Score: 438.3 bits (1126), Expect = 5.6e-122 Identity = 227/249 (91.16%), Postives = 239/249 (95.98%), Query Frame = 0
BLAST of CmoCh16G012910 vs. ExPASy Swiss-Prot
Match: Q0J006 (Proteasome subunit alpha type-7-B OS=Oryza sativa subsp. japonica OX=39947 GN=PAD1 PE=2 SV=1) HSP 1 Score: 438.3 bits (1126), Expect = 5.6e-122 Identity = 227/249 (91.16%), Postives = 239/249 (95.98%), Query Frame = 0
BLAST of CmoCh16G012910 vs. ExPASy Swiss-Prot
Match: O24616 (Proteasome subunit alpha type-7-B OS=Arabidopsis thaliana OX=3702 GN=PAD2 PE=1 SV=2) HSP 1 Score: 436.4 bits (1121), Expect = 2.1e-121 Identity = 227/250 (90.80%), Postives = 242/250 (96.80%), Query Frame = 0
BLAST of CmoCh16G012910 vs. ExPASy TrEMBL
Match: A0A6J1E654 (Proteasome subunit alpha type OS=Cucurbita moschata OX=3662 GN=LOC111430959 PE=3 SV=1) HSP 1 Score: 474.9 bits (1221), Expect = 2.0e-130 Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 0
BLAST of CmoCh16G012910 vs. ExPASy TrEMBL
Match: A0A6J1HND4 (Proteasome subunit alpha type OS=Cucurbita maxima OX=3661 GN=LOC111465180 PE=3 SV=1) HSP 1 Score: 472.2 bits (1214), Expect = 1.3e-129 Identity = 247/249 (99.20%), Postives = 248/249 (99.60%), Query Frame = 0
BLAST of CmoCh16G012910 vs. ExPASy TrEMBL
Match: A0A1S4BD58 (Proteasome subunit alpha type OS=Nicotiana tabacum OX=4097 GN=LOC107807090 PE=3 SV=1) HSP 1 Score: 464.5 bits (1194), Expect = 2.7e-127 Identity = 240/249 (96.39%), Postives = 247/249 (99.20%), Query Frame = 0
BLAST of CmoCh16G012910 vs. ExPASy TrEMBL
Match: A0A314L4L1 (Proteasome subunit alpha type OS=Nicotiana attenuata OX=49451 GN=PAD1 PE=3 SV=1) HSP 1 Score: 464.5 bits (1194), Expect = 2.7e-127 Identity = 240/249 (96.39%), Postives = 247/249 (99.20%), Query Frame = 0
BLAST of CmoCh16G012910 vs. ExPASy TrEMBL
Match: A0A1U7XU73 (Proteasome subunit alpha type OS=Nicotiana sylvestris OX=4096 GN=LOC104242240 PE=3 SV=1) HSP 1 Score: 464.5 bits (1194), Expect = 2.7e-127 Identity = 240/249 (96.39%), Postives = 247/249 (99.20%), Query Frame = 0
BLAST of CmoCh16G012910 vs. TAIR 10
Match: AT5G66140.1 (proteasome alpha subunit D2 ) HSP 1 Score: 436.4 bits (1121), Expect = 1.5e-122 Identity = 227/250 (90.80%), Postives = 242/250 (96.80%), Query Frame = 0
BLAST of CmoCh16G012910 vs. TAIR 10
Match: AT3G51260.1 (20S proteasome alpha subunit PAD1 ) HSP 1 Score: 431.8 bits (1109), Expect = 3.7e-121 Identity = 226/250 (90.40%), Postives = 239/250 (95.60%), Query Frame = 0
BLAST of CmoCh16G012910 vs. TAIR 10
Match: AT3G51260.2 (20S proteasome alpha subunit PAD1 ) HSP 1 Score: 420.2 bits (1079), Expect = 1.1e-117 Identity = 221/249 (88.76%), Postives = 234/249 (93.98%), Query Frame = 0
BLAST of CmoCh16G012910 vs. TAIR 10
Match: AT3G22110.1 (20S proteasome alpha subunit C1 ) HSP 1 Score: 171.8 bits (434), Expect = 7.0e-43 Identity = 87/200 (43.50%), Postives = 132/200 (66.00%), Query Frame = 0
BLAST of CmoCh16G012910 vs. TAIR 10
Match: AT1G16470.1 (proteasome subunit PAB1 ) HSP 1 Score: 164.9 bits (416), Expect = 8.5e-41 Identity = 93/234 (39.74%), Postives = 141/234 (60.26%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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