CmoCh16G012650 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTTATTCCTTCTGTTCCACTCACCTCCATGTATTTAAAAGCTCCACACTCGTCGTCCTCCCCAGTTAGTATTTCGTTTCTGTATTGAGCTTCGAGTCGCCATGGGTTTGAAGGTAGGTTTCTCTCTCATTCTTCTTCTGAATTCTCAGTTTCTTTACGTTATTAGCTTCGAAGCTCTCAATCCTTCTCTTTATGCCATTTTCTTGTTCGACCAGTAGTTGAATTCTTCGTTTAGAATGGGTGATTTGATGCCGAATGATTATGCTTTAGCTTTTCATTGGTGATGATCTTGGCATTGAGTTAGGGTATTAGTGCAGATCGCTGCATGTCTCTTGTTTTGCGTCGTAGTTATGCATTCATAATATGTTAGATTTGTTGGACTTCGTTAGAATGATTTCTGTTGGATCTGTCTTTTCAGATCTGTGTTTTTTAGAGTCGATCTGTGTTTGCCTTTCGAAGAATGAACGACATCTGGTCGTTCCGGATCGAGAGATGTTAATCTTTTGGTTGTTTCCAAATTGATTGCTTGACTCTAGATATTTAGGGCAATAGGTGCAGAGAATTGTAAGAACTTCATATATTTGTTCTGTTATATTGAACTAAAAGCACGCAGTCTGTATCACAACTTGATGAGGCTGAGTTCTGCAGGAGGAGTTTGAGGAGTATGCTGAGAAGGCAAAGACCTTGCCGGAGAACACAAGCAATGAAAACAAACTCATTCTCTATGGACTATACAAGCAGGCCACTGTTGGACCCGTGAACACTAGTAAGTACTGTCTTTCATTGAATATAATTTCTAAAGAAAATTTGTGTATAGATGGAATTATGTGATCAAATTCTCCAATGTAACCGTTTATTGCAACTATGATTGATTTGTAGGCCGACCTGGAGTGTTCAACCAGAGAGACAGAGCCAAATGGGATGCCTGGAAGGCTGTTGAAGGTATGTTTTCTCAGAATTCAACACTATGAAATGGATTTTCTCTATTTTGCGATGACATTGAAATATGTTTACTCTTTTTTGCCATGAACTCTATTAGATTAAAGATTTGTAAAAAATGTACAACAATGAGCTTGATTGAAGAGAATTAAATGTTTTTGCAGCAAAATCCAAGGATGATGCAATGAGCGACTACATCACGAAGGTGAAACAGTTACAAGAGGCAGCTGCTGCTAACTGATAAGTTTCTCGATTATCTGTATGAACAATGATGTTGAAATAATCCTTGTTTAAGTTCAGTACTTTTACCATATTTATCTACATTGTGTAACAATGAACTACACAATGAACTATGTGCAAGTATTATTACTATTGGATTTCGCTAATGAATCTTCAACCTTTTAACCAAATTAATATACTTGGGCTTGTTAATTGCTTTTTTCTTTTTTTCCACTTAAAAGCAGTATTCAAGCTGATAAGTGTCGACGGTGTCAACAGGATTTAGAAAGCTAGAG ATTTATTCCTTCTGTTCCACTCACCTCCATGTATTTAAAAGCTCCACACTCGTCGTCCTCCCCAGTTAGTATTTCGTTTCTGTATTGAGCTTCGAGTCGCCATGGGTTTGAAGGAGGAGTTTGAGGAGTATGCTGAGAAGGCAAAGACCTTGCCGGAGAACACAAGCAATGAAAACAAACTCATTCTCTATGGACTATACAAGCAGGCCACTGTTGGACCCGTGAACACTAGCCGACCTGGAGTGTTCAACCAGAGAGACAGAGCCAAATGGGATGCCTGGAAGGCTGTTGAAGCAAAATCCAAGGATGATGCAATGAGCGACTACATCACGAAGGTGAAACAGTTACAAGAGGCAGCTGCTGCTAACTGATAAGTTTCTCGATTATCTGTATGAACAATGATGTTGAAATAATCCTTGTTTAAGTTCAGTACTTTTACCATATTTATCTACATTGTGTAACAATGAACTACACAATGAACTATGTGCAAGTATTATTACTATTGGATTTCGCTAATGAATCTTCAACCTTTTAACCAAATTAATATACTTGGGCTTGTTAATTGCTTTTTTCTTTTTTTCCACTTAAAAGCAGTATTCAAGCTGATAAGTGTCGACGGTGTCAACAGGATTTAGAAAGCTAGAG ATGGGTTTGAAGGAGGAGTTTGAGGAGTATGCTGAGAAGGCAAAGACCTTGCCGGAGAACACAAGCAATGAAAACAAACTCATTCTCTATGGACTATACAAGCAGGCCACTGTTGGACCCGTGAACACTAGCCGACCTGGAGTGTTCAACCAGAGAGACAGAGCCAAATGGGATGCCTGGAAGGCTGTTGAAGCAAAATCCAAGGATGATGCAATGAGCGACTACATCACGAAGGTGAAACAGTTACAAGAGGCAGCTGCTGCTAACTGA MGLKEEFEEYAEKAKTLPENTSNENKLILYGLYKQATVGPVNTSRPGVFNQRDRAKWDAWKAVEAKSKDDAMSDYITKVKQLQEAAAAN Homology
BLAST of CmoCh16G012650 vs. ExPASy Swiss-Prot
Match: Q75G87 (Acyl-CoA-binding domain-containing protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=ACBP3 PE=2 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 3.4e-37 Identity = 76/88 (86.36%), Postives = 83/88 (94.32%), Query Frame = 0
BLAST of CmoCh16G012650 vs. ExPASy Swiss-Prot
Match: O04066 (Acyl-CoA-binding protein OS=Ricinus communis OX=3988 PE=3 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 3.4e-37 Identity = 76/89 (85.39%), Postives = 83/89 (93.26%), Query Frame = 0
BLAST of CmoCh16G012650 vs. ExPASy Swiss-Prot
Match: Q84SC3 (Acyl-CoA-binding domain-containing protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=ACBP1 PE=1 SV=1) HSP 1 Score: 153.7 bits (387), Expect = 9.9e-37 Identity = 75/88 (85.23%), Postives = 83/88 (94.32%), Query Frame = 0
BLAST of CmoCh16G012650 vs. ExPASy Swiss-Prot
Match: Q5VRM0 (Acyl-CoA-binding domain-containing protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=ACBP2 PE=1 SV=1) HSP 1 Score: 143.3 bits (360), Expect = 1.3e-33 Identity = 68/89 (76.40%), Postives = 80/89 (89.89%), Query Frame = 0
BLAST of CmoCh16G012650 vs. ExPASy Swiss-Prot
Match: O22643 (Acyl-CoA-binding protein OS=Fritillaria agrestis OX=64177 GN=ACABP PE=3 SV=1) HSP 1 Score: 142.9 bits (359), Expect = 1.8e-33 Identity = 69/87 (79.31%), Postives = 79/87 (90.80%), Query Frame = 0
BLAST of CmoCh16G012650 vs. ExPASy TrEMBL
Match: A0A6J1HK57 (acyl-CoA-binding protein OS=Cucurbita maxima OX=3661 GN=LOC111465252 PE=3 SV=1) HSP 1 Score: 178.7 bits (452), Expect = 1.1e-41 Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0
BLAST of CmoCh16G012650 vs. ExPASy TrEMBL
Match: A0A6J1E5N1 (acyl-CoA-binding protein OS=Cucurbita moschata OX=3662 GN=LOC111430996 PE=3 SV=1) HSP 1 Score: 178.7 bits (452), Expect = 1.1e-41 Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0
BLAST of CmoCh16G012650 vs. ExPASy TrEMBL
Match: A0A6J1CVA5 (acyl-CoA-binding protein OS=Momordica charantia OX=3673 GN=LOC111014892 PE=3 SV=1) HSP 1 Score: 172.2 bits (435), Expect = 9.9e-40 Identity = 84/89 (94.38%), Postives = 89/89 (100.00%), Query Frame = 0
BLAST of CmoCh16G012650 vs. ExPASy TrEMBL
Match: A0A6J1KW16 (acyl-CoA-binding domain-containing protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111498704 PE=3 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 1.7e-39 Identity = 86/89 (96.63%), Postives = 87/89 (97.75%), Query Frame = 0
BLAST of CmoCh16G012650 vs. ExPASy TrEMBL
Match: A0A6J1F9P6 (acyl-CoA-binding domain-containing protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111443564 PE=3 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 1.7e-39 Identity = 86/89 (96.63%), Postives = 87/89 (97.75%), Query Frame = 0
BLAST of CmoCh16G012650 vs. TAIR 10
Match: AT1G31812.1 (acyl-CoA-binding protein 6 ) HSP 1 Score: 130.6 bits (327), Expect = 6.4e-31 Identity = 64/88 (72.73%), Postives = 75/88 (85.23%), Query Frame = 0
BLAST of CmoCh16G012650 vs. TAIR 10
Match: AT5G53470.1 (acyl-CoA binding protein 1 ) HSP 1 Score: 60.1 bits (144), Expect = 1.1e-09 Identity = 32/75 (42.67%), Postives = 40/75 (53.33%), Query Frame = 0
BLAST of CmoCh16G012650 vs. TAIR 10
Match: AT4G27780.1 (acyl-CoA binding protein 2 ) HSP 1 Score: 52.8 bits (125), Expect = 1.7e-07 Identity = 27/69 (39.13%), Postives = 36/69 (52.17%), Query Frame = 0
BLAST of CmoCh16G012650 vs. TAIR 10
Match: AT3G05420.1 (acyl-CoA binding protein 4 ) HSP 1 Score: 50.4 bits (119), Expect = 8.4e-07 Identity = 21/63 (33.33%), Postives = 37/63 (58.73%), Query Frame = 0
BLAST of CmoCh16G012650 vs. TAIR 10
Match: AT3G05420.2 (acyl-CoA binding protein 4 ) HSP 1 Score: 50.4 bits (119), Expect = 8.4e-07 Identity = 21/63 (33.33%), Postives = 37/63 (58.73%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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