CmoCh16G012280 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh16G012280
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionGTPase
LocationCmo_Chr16: 8794146 .. 8797221 (+)
RNA-Seq ExpressionCmoCh16G012280
SyntenyCmoCh16G012280
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGAGTTGCAGAGAGAAGCAGAAGAAAGTTCTAGAGAGAGAGTGAAATGGTTCTATGGGAGATCACTCTTGGAACAGCCTATTTCTTGGGGCTCAAGCGAACATATCGCCTCGCCCTCAAGCTTCAACGCCGTATCGTCAGCCCAAAGTTTCCCAAGATCCGTCAGTTTCTTCACCGGTAATTTCAATTTCTGTCTTCTTTTGATCTGTTGATTCGATGATGATGGAATTTGAGCTGGAAATGTGTTTCTGTGTTGTGTTATTTGTTGATTCGGCTTTCTTTTCCAATCGCGAGTTCGAATTGAGATAAACCCTGTTTTGGGTTTCGATTTTATCCTTCATTTCATTCAATTCGTTTGTTCGAAGATGATTTGATCTGATGAAATGGAGGATTATCTGTTTTACGAACCAAGAGTTTTTTCTTGCATCAAGAAGTTTATGGGAAGGTTGAAGAATCTTTCATTTTGCTGCTCTTTGTAATGTTGTTCTGTGTAAGAAATTGACTATTGTTATCAAATTTTGGCATCTCGTTTTCTTTGTTACCAAATCTTCGGTTTAAATAGATATATAATTTGATTTGCCTTTCAGCTTCCTAGGGGGATGTTATGATTTGTAATTTGGAGGTTAGGTTGATGAGTTAATCTCTTGGATCATTTTCAAGTGGCATTAATGAGGGGTTCTCTTCTTCCTTTCTCTCATTTTTCACTCTCATGCTTGATGATCAATTCCAGCACTTCTATCATCCCTTTCACCTTCCAACAGCAGTTCATTTTTATAATGAATGCACCAATAGTTCTTAGATCTTATAGTTCTAACATGGAGTGGAAAATCCACCCTTTTGAAGCATGATCAGGACATTTTGTCATGGGCTGTGATTATTGTTTCAAGGCTCATAATTTTGAAGCATGGAAGTTTGTTCCAAGAATTATAAAGCACCAATATTGTTTAGATCTTATGGTTCTAGCATGGGGTGAAAATCCACCCTTTTGAAGCATGATCAGGACATCTTGTCATGGTTGCTATGATTTTTGTTTTAATGCTCATAATTATGAAGCATGGAAGTTTGTTCCAAGAATTATAAAGCACCAATACCTTTTTAGATCTTGTAATTCTAACATTGGGTGAAAATCCACCTTTCTGAAGAATAATCAGAACATTTTGTCATGGTCTGTGATTATTGTTTTGAGGCTCATAATTATGAAGCGTGTTAGTTTGTTCCAAGAATTATAAAGCATGAAAAGTAAAGTCTTATGGATCATAATGATGGGAACCTCAAGGTATGCCATAGCAGTAAGGGCTTAGATACCTTCCGAGGTTTAAAAGCCTTTAAGCTATTTGTCTCCGAGCTGGCTTTGGGGTAGGCTAAGCCTCCCTGAGAATTTTGCACGGTGAACCACGAACACAATGCAAGATATGATAGATGTGAGCATGAACATTCTGATTATAATATAAATAATGATGATGATGAGTAAAAGCCATGTTCATTGGTCTTTAAATTGGGCTACAATGAGAGGAGTGTTGTAACAATCAAAGTCCACCGCTAGCAGATATTGTCTTCTTTGGATTTTCCCTTTTGAGCTTCCTCTCAAGGTTTTTATAACGCGTTTGCTAGGGAGAGGTTTCCACACCGTTTTAAAGAATGCTCCGTTCTCCTCTCCAACTGATGTGGGATCTCACAATCCACCCCCCTTCAGGGCCTAGCATCCTTAGAGACACACCACCTCGTGTCCATCCTCTTTTGGGGCTTAGCCTCCTCGCTGGCACATCATCCAGTGTTTGGCTCTGATACCATTTGTAATAACTCAAGCCCACTACTAGCCGATATTGTCTTTTTTGGGCTTTTTCTTTCAGGCTGGGCTTTCCCTTTCGGGCTTCCTCTCAAGGTTTTTAGAACGCGTTTGCTAGGGAGAGGTTTCCACACCCTTATGAACAATGCTTAGTTCTCTTCCAAACCGATATGGGATCTCACAAGTGCATAGAAAAGTTAGCATGTGCATGTAACCGCATCATGATTATGAGAAGGAGAATTAACTCTCTCGTTTTCTTGTGTAATTTGTTTCTTGTTACTCTAGTATGAGACGGTAGATTGTCTTTGTTGTGTTGGTTTAAAGGTGAACAGATAAAGGACTGTAATTTAGAACAGTTTTTTCTATGATGACATTCCTCTCTTCGTACATAATATGGTGCCACTCATTAAGTCATAATGTCCTGGTTTCTTATTGATACGATACTTTCAATAACCATGAATGTGAAATATTCTGCCTGTCGCCATTTCTTCTGCAGACGTACCCGTATCGTGTTTGATGTAGCATTAAAGGTTCATCTGAACATACAGCAGAGAGACTTAGAAGTTGGTCGGAATCTTGGTAACTGGATTCTACGACTGCTCGACAGATATAAACCATCAGCTCAAATCCGTAAACAAGATGGTGGATCGATCAAAAACGCGACAAAGCAGATTTCCAGCACCTCCGTCTCGAAAAATCCAGAGAGCTCCCAGGTCCTGAAGAAGCCAAAATCTTCTAGACAATTATTTACCTCATCAACAAACCTATGGCCTAAGCAATTTCCTACAATTTCCATGACGATGAAGCCTTCAAACCCAGCCACAACTATGATCCAGCATAGACATTTTGGTATTTTGACACCTGAAGCGCCTCGACCAAGATACGGAGGAAGAGGATGGCATGGCGGGGTCATTCGGGAGGATATAAGGCAATGGATGCTGCAAAACTAGGAACAAAAGTTCACTGTTCTCTTCCATTTTGTTGAGACAGGAAGGATTCACATGAACATGCTACAACAAGATCATAGGACATCATCATGGCAACTGAAAACAGAAGCTGCACCAATTGAATGCTTAGATTTTCTGGTCTGCTTCTTGGCGCTTGAACATTTGGTGGATAACTGGTTTTCTTTGGTTTCTGCGTACTGTTGTTACGAAAATTTATTAACATCGATCCAGAAGAGACTTCGTTAGAGGTTGATTCGCCTTTAGAAACATATATATGCTTTACAAGTTGTACCCTTTTGTTACCACAGAAAAGAAAAGTGAAGAATTTGCTCGTCTTTCTTGCA

mRNA sequence

CGAGTTGCAGAGAGAAGCAGAAGAAAGTTCTAGAGAGAGAGTGAAATGGTTCTATGGGAGATCACTCTTGGAACAGCCTATTTCTTGGGGCTCAAGCGAACATATCGCCTCGCCCTCAAGCTTCAACGCCGTATCGTCAGCCCAAAGTTTCCCAAGATCCGTCAGTTTCTTCACCGACGTACCCGTATCGTGTTTGATGTAGCATTAAAGGTTCATCTGAACATACAGCAGAGAGACTTAGAAGTTGGTCGGAATCTTGGTAACTGGATTCTACGACTGCTCGACAGATATAAACCATCAGCTCAAATCCGTAAACAAGATGGTGGATCGATCAAAAACGCGACAAAGCAGATTTCCAGCACCTCCGTCTCGAAAAATCCAGAGAGCTCCCAGGTCCTGAAGAAGCCAAAATCTTCTAGACAATTATTTACCTCATCAACAAACCTATGGCCTAAGCAATTTCCTACAATTTCCATGACGATGAAGCCTTCAAACCCAGCCACAACTATGATCCAGCATAGACATTTTGGTATTTTGACACCTGAAGCGCCTCGACCAAGATACGGAGGAAGAGGATGGCATGGCGGGGTCATTCGGGAGGATATAAGGCAATGGATGCTGCAAAACTAGGAACAAAAGTTCACTGTTCTCTTCCATTTTGTTGAGACAGGAAGGATTCACATGAACATGCTACAACAAGATCATAGGACATCATCATGGCAACTGAAAACAGAAGCTGCACCAATTGAATGCTTAGATTTTCTGGTCTGCTTCTTGGCGCTTGAACATTTGGTGGATAACTGGTTTTCTTTGGTTTCTGCGTACTGTTGTTACGAAAATTTATTAACATCGATCCAGAAGAGACTTCGTTAGAGGTTGATTCGCCTTTAGAAACATATATATGCTTTACAAGTTGTACCCTTTTGTTACCACAGAAAAGAAAAGTGAAGAATTTGCTCGTCTTTCTTGCA

Coding sequence (CDS)

ATGGTTCTATGGGAGATCACTCTTGGAACAGCCTATTTCTTGGGGCTCAAGCGAACATATCGCCTCGCCCTCAAGCTTCAACGCCGTATCGTCAGCCCAAAGTTTCCCAAGATCCGTCAGTTTCTTCACCGACGTACCCGTATCGTGTTTGATGTAGCATTAAAGGTTCATCTGAACATACAGCAGAGAGACTTAGAAGTTGGTCGGAATCTTGGTAACTGGATTCTACGACTGCTCGACAGATATAAACCATCAGCTCAAATCCGTAAACAAGATGGTGGATCGATCAAAAACGCGACAAAGCAGATTTCCAGCACCTCCGTCTCGAAAAATCCAGAGAGCTCCCAGGTCCTGAAGAAGCCAAAATCTTCTAGACAATTATTTACCTCATCAACAAACCTATGGCCTAAGCAATTTCCTACAATTTCCATGACGATGAAGCCTTCAAACCCAGCCACAACTATGATCCAGCATAGACATTTTGGTATTTTGACACCTGAAGCGCCTCGACCAAGATACGGAGGAAGAGGATGGCATGGCGGGGTCATTCGGGAGGATATAAGGCAATGGATGCTGCAAAACTAG

Protein sequence

MVLWEITLGTAYFLGLKRTYRLALKLQRRIVSPKFPKIRQFLHRRTRIVFDVALKVHLNIQQRDLEVGRNLGNWILRLLDRYKPSAQIRKQDGGSIKNATKQISSTSVSKNPESSQVLKKPKSSRQLFTSSTNLWPKQFPTISMTMKPSNPATTMIQHRHFGILTPEAPRPRYGGRGWHGGVIREDIRQWMLQN
Homology
[Close]
BLAST of CmoCh16G012280 vs. ExPASy TrEMBL
Match: A0A6J1E656 (uncharacterized protein LOC111431071 OS=Cucurbita moschata OX=3662 GN=LOC111431071 PE=4 SV=1)

HSP 1 Score: 387.9 bits (995), Expect = 2.5e-104
Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 0 

Query: 1   MVLWEITLGTAYFLGLKRTYRLALKLQRRIVSPKFPKIRQFLHRRTRIVFDVALKVHLNI 60
           MVLWEITLGTAYFLGLKRTYRLALKLQRRIVSPKFPKIRQFLHRRTRIVFDVALKVHLNI
Sbjct: 1   MVLWEITLGTAYFLGLKRTYRLALKLQRRIVSPKFPKIRQFLHRRTRIVFDVALKVHLNI 60

Query: 61  QQRDLEVGRNLGNWILRLLDRYKPSAQIRKQDGGSIKNATKQISSTSVSKNPESSQVLKK 120
           QQRDLEVGRNLGNWILRLLDRYKPSAQIRKQDGGSIKNATKQISSTSVSKNPESSQVLKK
Sbjct: 61  QQRDLEVGRNLGNWILRLLDRYKPSAQIRKQDGGSIKNATKQISSTSVSKNPESSQVLKK 120

Query: 121 PKSSRQLFTSSTNLWPKQFPTISMTMKPSNPATTMIQHRHFGILTPEAPRPRYGGRGWHG 180
           PKSSRQLFTSSTNLWPKQFPTISMTMKPSNPATTMIQHRHFGILTPEAPRPRYGGRGWHG
Sbjct: 121 PKSSRQLFTSSTNLWPKQFPTISMTMKPSNPATTMIQHRHFGILTPEAPRPRYGGRGWHG 180

Query: 181 GVIREDIRQWMLQN 195
           GVIREDIRQWMLQN
Sbjct: 181 GVIREDIRQWMLQN 194

[Close]
BLAST of CmoCh16G012280 vs. ExPASy TrEMBL
Match: A0A6J1HLD5 (uncharacterized protein LOC111465222 OS=Cucurbita maxima OX=3661 GN=LOC111465222 PE=4 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 2.4e-99
Identity = 187/194 (96.39%), Postives = 189/194 (97.42%), Query Frame = 0 

Query: 1   MVLWEITLGTAYFLGLKRTYRLALKLQRRIVSPKFPKIRQFLHRRTRIVFDVALKVHLNI 60
           MVLWEITLGTAYFLGLKRTYRLALKLQRRIVSPKFPKIRQFLHRRTRIVFDVALKVHLNI
Sbjct: 1   MVLWEITLGTAYFLGLKRTYRLALKLQRRIVSPKFPKIRQFLHRRTRIVFDVALKVHLNI 60

Query: 61  QQRDLEVGRNLGNWILRLLDRYKPSAQIRKQDGGSIKNATKQISSTSVSKNPESSQVLKK 120
           QQRDLEVGRNLGNWILRLLDRYKPSAQIRKQDGGSIKN TKQISS+ V KNPESSQVLKK
Sbjct: 61  QQRDLEVGRNLGNWILRLLDRYKPSAQIRKQDGGSIKNTTKQISSSPVLKNPESSQVLKK 120

Query: 121 PKSSRQLFTSSTNLWPKQFPTISMTMKPSNPATTMIQHRHFGILTPEAPRPRYGGRGWHG 180
           PKSSRQLFTSSTN+WPKQFPTISMTMKPSNPATTMIQHRHFGILTPE PRPRY GRGWHG
Sbjct: 121 PKSSRQLFTSSTNIWPKQFPTISMTMKPSNPATTMIQHRHFGILTPEVPRPRY-GRGWHG 180

Query: 181 GVIREDIRQWMLQN 195
           GVIREDIRQWMLQN
Sbjct: 181 GVIREDIRQWMLQN 193

[Close]
BLAST of CmoCh16G012280 vs. ExPASy TrEMBL
Match: A0A1S3BJL2 (uncharacterized protein LOC103490759 OS=Cucumis melo OX=3656 GN=LOC103490759 PE=4 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 2.4e-86
Identity = 166/194 (85.57%), Postives = 178/194 (91.75%), Query Frame = 0 

Query: 1   MVLWEITLGTAYFLGLKRTYRLALKLQRRIVSPKFPKIRQFLHRRTRIVFDVALKVHLNI 60
           MVLWEITLGTAYFLGLKRTYRLALKLQRRI+SPK PKIRQF+HRRTR VFDVALKVHLNI
Sbjct: 1   MVLWEITLGTAYFLGLKRTYRLALKLQRRIISPKLPKIRQFVHRRTRNVFDVALKVHLNI 60

Query: 61  QQRDLEVGRNLGNWILRLLDRYKPSAQIRKQDGGSIKNATKQISSTSVSKNPESSQVLKK 120
           Q+RDLEVGRNLGNWILRLLDRYKPSAQIRKQDG S+ NA KQISS+S+ K PESSQ LKK
Sbjct: 61  QKRDLEVGRNLGNWILRLLDRYKPSAQIRKQDGESMTNAKKQISSSSILKMPESSQTLKK 120

Query: 121 PKSSRQLFTSSTNLWPKQFPTISMTMKPSNPATTMIQHRHFGILTPEAPRPRYGGRGWHG 180
           PKSSRQLFTSSTN+WPKQFPTISM +K SNPA+ MIQHRHFGILTP AP P+Y  RGW G
Sbjct: 121 PKSSRQLFTSSTNIWPKQFPTISMMIKSSNPASNMIQHRHFGILTPVAPGPKY-VRGWQG 180

Query: 181 GVIREDIRQWMLQN 195
           GVIREDIR+W+LQN
Sbjct: 181 GVIREDIRRWLLQN 193

[Close]
BLAST of CmoCh16G012280 vs. ExPASy TrEMBL
Match: A0A0A0L6E7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G008880 PE=4 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 7.6e-85
Identity = 165/194 (85.05%), Postives = 176/194 (90.72%), Query Frame = 0 

Query: 1   MVLWEITLGTAYFLGLKRTYRLALKLQRRIVSPKFPKIRQFLHRRTRIVFDVALKVHLNI 60
           MVLWEITLGTAYFLGLKRTYRLALKLQRRI+SPK PKIRQF+ RRTR VFDVALKVHLNI
Sbjct: 1   MVLWEITLGTAYFLGLKRTYRLALKLQRRIISPKLPKIRQFVRRRTRDVFDVALKVHLNI 60

Query: 61  QQRDLEVGRNLGNWILRLLDRYKPSAQIRKQDGGSIKNATKQISSTSVSKNPESSQVLKK 120
           Q+RDLEVGRNLGNWILRLLDRYKPSAQIRKQDG S+ NA KQISS+S+ K PESSQ LKK
Sbjct: 61  QKRDLEVGRNLGNWILRLLDRYKPSAQIRKQDGESMANAKKQISSSSILKMPESSQTLKK 120

Query: 121 PKSSRQLFTSSTNLWPKQFPTISMTMKPSNPATTMIQHRHFGILTPEAPRPRYGGRGWHG 180
           PKSSRQLFTSSTN+WPKQFPTISM +K SNPA+ MIQHRHFGILTP A  P+Y  RGW G
Sbjct: 121 PKSSRQLFTSSTNIWPKQFPTISMMIKSSNPASNMIQHRHFGILTPAALGPKY-VRGWQG 180

Query: 181 GVIREDIRQWMLQN 195
           GVIR+DIRQWMLQN
Sbjct: 181 GVIRDDIRQWMLQN 193

[Close]
BLAST of CmoCh16G012280 vs. ExPASy TrEMBL
Match: A0A6J1CW49 (uncharacterized protein LOC111014837 OS=Momordica charantia OX=3673 GN=LOC111014837 PE=4 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 1.5e-77
Identity = 157/201 (78.11%), Postives = 165/201 (82.09%), Query Frame = 0 

Query: 1   MVLWEITLGTAYFLGLKRTYRLALKLQRRIVSPKFPKIRQFLHRRTRIVFDVALKVHLNI 60
           MVLWEITLGTAYFLGLKRTYRLALKLQRR+VSPK PKIR+FLH R R VFDVALKVH N+
Sbjct: 44  MVLWEITLGTAYFLGLKRTYRLALKLQRRLVSPKHPKIRRFLHGRVRTVFDVALKVHQNV 103

Query: 61  QQRDLEVGRNLGNWILRLLDRYKPSAQIRK-------QDGGSIKNATKQISSTSVSKNPE 120
           QQRDLEVGRNLGNWILR LDR+KPSAQIRK          GS  N TKQI S+SV KNPE
Sbjct: 104 QQRDLEVGRNLGNWILRWLDRFKPSAQIRKPVAVKSSNSSGSNTNMTKQIPSSSVLKNPE 163

Query: 121 SSQVLKKPKSSRQLFTSSTNLWPKQFPTISMTMKPSNPATTMIQHRHFGILTPEAPRPRY 180
           SSQ+LK PKSSRQLFTSSTN+W K FPTISM MK   PA TM QHRHFGI   EAPRP+Y
Sbjct: 164 SSQILKNPKSSRQLFTSSTNMWAKSFPTISMMMKSPKPAGTMFQHRHFGISMLEAPRPKY 223

Query: 181 GGRGWHGGVIREDIRQWMLQN 195
             RGWH GVIREDIRQWMLQN
Sbjct: 224 -VRGWHDGVIREDIRQWMLQN 243

[Close]
BLAST of CmoCh16G012280 vs. TAIR 10
Match: AT1G32260.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G35480.1); Has 48 Blast hits to 48 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 195.7 bits (496), Expect = 3.5e-50
Identity = 108/201 (53.73%), Postives = 139/201 (69.15%), Query Frame = 0 

Query: 1   MVLWEITLGTAYFLGLKRTYRLALKLQRRIVSPKFPKIRQFLHRRTRIVFDVALKVHLNI 60
           MV WEITLGTAYFLGL+RTYRLALK+QRR+V+PK PKIRQFLHRRTR +FDVA+ VH NI
Sbjct: 1   MVFWEITLGTAYFLGLRRTYRLALKIQRRLVTPKHPKIRQFLHRRTRKIFDVAISVHKNI 60

Query: 61  QQRDLEVGRNLGNWILRLLDRYKPSAQIRKQ-----DGGSIKNATKQISSTSVSK-NPES 120
           Q+RD+EVGRNLGNWILR LD+ KP+AQIR +     +  S  +  K+++  S  K +  +
Sbjct: 61  QERDIEVGRNLGNWILRWLDKMKPAAQIRTRPELPHNSNSNMDKAKRLTELSRPKSHTNT 120

Query: 121 SQVLKKPKSSRQLFTSSTNLWPKQFPTISMTMKPSNPATTMIQHRHF--GILTPEAPRPR 180
           +Q  +  +S R LFTS  +   K FP++SM ++P  P  T  Q+RH+  G L     +P 
Sbjct: 121 TQTPQNRESDRHLFTSLKHFRHKPFPSVSMMIQPPRPNGTTTQYRHYYSGGLAASLIQPS 180

Query: 181 YGGRGWHGGVIREDIRQWMLQ 194
           Y   G   GV+R+DI QWM Q
Sbjct: 181 YVTGGGFNGVVRKDILQWMAQ 201

[Close]
BLAST of CmoCh16G012280 vs. TAIR 10
Match: AT2G35480.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G32260.1); Has 47 Blast hits to 47 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 170.6 bits (431), Expect = 1.2e-42
Identity = 102/196 (52.04%), Postives = 128/196 (65.31%), Query Frame = 0 

Query: 1   MVLWEITLGTAYFLGLKRTYRLALKLQRRIVSPKFPKIRQFLHRRTRIVFDVALKVHLNI 60
           MVLWE+ LGTAYFLG++RTYRLALK QRR+VSPK P+IR F+HRRT  +FD+AL+VH NI
Sbjct: 1   MVLWELALGTAYFLGIRRTYRLALKTQRRLVSPKHPRIRDFMHRRTYQIFDMALRVHKNI 60

Query: 61  QQRDLEVGRNLGNWILRLLDRYKPSAQI--RKQDGGSIKNATKQISSTSVSKNPESSQVL 120
           QQRD+ +GRNLGNWILR LDR KPSAQ+   K    SI  A + + ST + K   ++Q  
Sbjct: 61  QQRDMVIGRNLGNWILRGLDRMKPSAQVLLPKNTEPSIDKAKRVLQSTRL-KPHVNTQTP 120

Query: 121 KKPKSSRQLFTSSTNLWPKQFPTISMTM-KPSNPATTMIQHRHFGILTPEAPRPRYGGRG 180
           +  +  R LF S  N   K +P  SM M KP     T  Q+R + +      +P Y  RG
Sbjct: 121 QNREVDRNLFMSLRNFRSK-YPIASMMMIKPPRSTGTTTQYRPYSVGESSLIKPIY-ARG 180

Query: 181 WHGGVIREDIRQWMLQ 194
               VIR+DI QWM+Q
Sbjct: 181 GFNSVIRKDILQWMVQ 193

The following BLAST results are available for this feature:
BLAST of CmoCh16G012280 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh16G012280 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1E6562.5e-104100.00uncharacterized protein LOC111431071 OS=Cucurbita moschata OX=3662 GN=LOC1114310... [more]
A0A6J1HLD52.4e-9996.39uncharacterized protein LOC111465222 OS=Cucurbita maxima OX=3661 GN=LOC111465222... [more]
A0A1S3BJL22.4e-8685.57uncharacterized protein LOC103490759 OS=Cucumis melo OX=3656 GN=LOC103490759 PE=... [more]
A0A0A0L6E77.6e-8585.05Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G008880 PE=4 SV=1[more]
A0A6J1CW491.5e-7778.11uncharacterized protein LOC111014837 OS=Momordica charantia OX=3673 GN=LOC111014... [more]
BLAST of CmoCh16G012280 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G32260.13.5e-5053.73unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT2G35480.11.2e-4252.04unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 89..124
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 91..124
NoneNo IPR availablePANTHERPTHR35998FAMILY NOT NAMEDcoord: 1..193

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh16G012280.1CmoCh16G012280.1mRNA