CmoCh16G012030 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh16G012030
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	AT-hook motif nuclear-localized protein
Location	Cmo_Chr16: 8608087 .. 8615957 (-)
RNA-Seq Expression	CmoCh16G012030
Synteny	CmoCh16G012030

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGTTGTCTCTCCTTTCCTTGTCTGTTCACTTGTCACTAACCACTGATCGAACAAATTAGCAACACGAATCACTGAACCAACAATTTCCTTTTTCTTGCTTCTTCCTTTATAAATCCAAACAAAAATCGAAGAACAAGAAAGGATTCTTTCTCCGTTCTTCCCACATTCCCCCATCTGATTTTCCGCCATGGATTCACGAGAGAGGTCGATGCCTTCTGTTCATCAACATCACCAACAATCAACTCCACCAAACAGGATGATGGGCAACGCTTCCTATTCCACAAATTTACCCAATACCAACAATTCTTCCCAAATGATCAACCCCAATTCCGCCGCTGCTCAAATCATGTCCTCCGCCTCCCGATTTCCCTTCAACTCCATGATGGGGTCCGCTTCTAAGCCCTCCGACTCTCCCAATACGGCTTCTTATGATGGATCGCATTCCGAATTGCGGACTGGTGGGTTTAACATTGATTCCGGGAAGAAGAAGCGAGGCCGACCCAGAAAGTATTCCCCTGATGGGAATATCGCCTTGGGTTTAGCGCCAACAACCATCACTAATTCCGCCGTTCCCGGCGATTCTTCCGGCATGAACTCCTCGGATCCTCGCCCTAAGAAGAACAGAGGACGGCCTCCCGGTACAGGGAAGAAGCAAATGGATGCTTTGGGTAGTCATCTTTATGCCTTTGCTACTGCTTCTTGTTTTTTTGTGCCTTGAATAATGGTGTTATTCCGGTGGACAGGGACTGGCGGTGTTGGCTTTACTCCGCATGTCATTCTGGTGAATCCAGGAGAGGTATAAGCAACTTGTTTTGTTTTGTATATTATATTGCTGATGAATTTGATTTGATCTTATCTGTTTTCTTTCAAATTTTTATTGTCTATTCAATGGTATTCAATATTATTTATTCCCTCGGTCGATCTTTTGGGATTCTATTGCAGAACATAACATTAGTTCATTAAATCAAGTGAGCTGGGAGCCTGTTTGTTTAAGATAAGATATTAAGATTCTACAATCATGGTAGATTTAACACTGGCTGATGCACCACAACTCCTTGAGAATGTGGATGTGTAAATGTGTAAGTATACACGATTATACGGGCAAGTTTTCGGGGTCTGATGCTTAAGTTTTTTTTTTCTTTTTTGGATAAACTGTTATACGTTTCAAAGTGTTGTTCACGTTCCTCTTTGGTTTTGCATTGAATTGGATCCACGATTTGTAGAGTTCAATATTGTGATTTCTTGTCATTTTTAATATGTAATGTTAATATTTGATCATCCAAAGTCAAAACAGTTCCCTAAACCTCGTTTCAGAGTGGAGCTTTGTTATGAACTGTACATGTTGATGGTGATTGTAATTAGGTTCGAGAAGACACTTCATCACTCAACAACCTCTTATATTGGTGTTTTCAAGACTTTTCGACATTGTAGAAGTCTAGAATTGTGTGGTGCGAGGGAGGAGACTGGTCTATTAGTTGGAGGAGAATTTGGACTGGTCGGGAAAGAGAAAAAAAGACTTTCCTTGAAGGAGCTTTTGAGGAGCTTTCTAGTTCAGTTTGGTTTGATTCCATTCCTTGGGTCTTTTGCTAAATCTCGTTCTTCCATTTACCAAGCGATATCCCATTCAGAGATATCAACAAAGATATTTGGCATATGAAACTCTAAAGATATCTTTCGCTTGTGTTATCTTCGTCACTAATTGGTTTGTTTTTCTGGTAGGATGCGTCTTCGAATGCTCCGTTTGTTCTTTTTAGATGAATTTTGAGTTTCTTCTGGTGTTCATCTGCTTTAGATTGTGATTACCTCTTTTGCTCTGATAATATTTTAAAACAATGCAGTTCTTTCTTCTTTAAACCTTTATGCAAATTGATCTGTTCTGGAAGGCAAGAAATTTAAGGCCTTCAATCCTTTTTTTGTCGAGCAGCTTCATATTTCTTTAATGATTTTATCGTATATTGTTAACATATTGTCATACATTCTAGCAAATGTTATTCGGAAACATGTGCTCTTTTTTATTTTTTGGATGTTCATGAACGTGAGGGCATGTTTGCACACATCAACATTGTTCTGATGCCAAATTTGGATAACTTTCTGATGTCAAATTTGGATAAATTTGTATATCTTTTAAGACTCATACGATCGTTCATAAATATAGTTTTGTCAGTCAAGTTTAATATCGAGATACTTTTTGAATTCAGAATAATCCTCTTATATGATTTTAGAGAAGTTTTCCATGGTACAGATTTGTGCGTTTTTGAATGTGTTTTCGTAGTTTGCTCCCCTTCCTTAAGATGGATATGGGTTTATTAGTTTGAAGGTTAATTGATACTTGTTTTAAACAGGATGCCTTTTCATTGGTTTGCAGGATATTGCCTCAAAAGTTATGTCATTTTCACAGCAGGGGCCGCGAACCATTTGTATTCTCTCTGCCCATGGTGCTGTTTGCAATGTTACCCTTCACCAACCCGCAGCTGGTAGTGTGACATATGAGGCAAGTTTTTAATTTTCCTAAGTTATACGGTCTTGATGTCGATTAACTGTACCGTCCTGCACATTAACTTACAAAACATAGAAAGATCCATGTGCGAGATTTGCTTAAGCTTATGTGCATATGCATACACATCATGTTCTTGTTTATTAATGCTGTCACCCGTCATCTACTCTCGATTTTGGTTTTCCTTCGGAGCGTGAGTCACTTTACATCGAACGCTTGTAGATTGTAGCTCAGGCTAGCTATCCTATTCCTGTATGTACTCTTTGCCTCTCTTAACCTTCTTGCCGTAGCTTGTTCTAGTACATAATGAGTGCATGGTGTTGGTCACCCCTGACCAGCCGTTCGGGCTTATCTATATGGAAGTTAAGGTAATCTCCTCTGTTTTAAATATGTATAGTACTTGTAGTGTATCTTATCCGTTTCTTTTCGAGCGTCCTAAAAGAAGGAAAAGTTAGCATTGACCATTAAGGATTTTAGCCTTATGAAGGTGTGACCAAAAGGTGGTTGCAGAAAGAATCCCCTAAGATTTTGGGAGCACACCAGGAGTGATTGAAGGTAGAGGTCAAATAGTATTAGAAAGCAGTGACAAGGGGGCAGGGGATAAACAAACGTTTTCCGTCTTGTTCTTACATAGCACATACGACCGACTAGGGGCTGACTGGTTTTCGTAGAAAAGCTTCTAGATGAACATCTTGACTTTCTTAGTATGAGATTCATTCCAAATCTACTTGCAACGGTGTAGGATTTGAGATTCCATGGCTATTTCTTCAAGGAGTGACTCACAAGTGACTATATACCAATGGAGTTTAGAGCGAAACTATTTATCTCGAGGCAAGTTAAGGCAAGGGTCATTAATGAGATACTCGAGGGAGGAGGTTGCAACCGTTCTACTTTTTCCGATCCTTTATTAAAATTCAGAAATAGAAATACTAATAATCTACCCTAACAAAGGAACTATGTCCTAAGTGCGGAAAACTTGACTTTATTCCATAGCCTTCTCAGGTGGCGCTGTCTCCCTTGCCTTTATTTGAAAAAATGATCCATAGGATGAGTATTTACAAATACTCATTAAGTGACCTTTTTTGGTTGGAAAATGCAATCGCATGCAACGTGGTTCATGACTAGTGGGACTTACTTTTCTTGACTGTTTCTTGGTCTCTACTTTCTTTTCTAGATAAGGTTGAATGCATGATATTTCTCTATACAAGGTTTATACACGCATGCATGCACTCACTAGGTGGGGTCGTATATATACCCTAGGTTTAACAATGGGCTAGTGCACATTTACACTGTCAAAAGCCAACAGAAAAGACACGAGCATGTATAATATCGTGGTGTACGCGTGCGTACGTAACATACTGGAGAAATAATTAATATTTGTGATATATAACATGCATGAGGTACTGCATTTAAAATCACGATACAATGTTATGATGTACATAATACTTCAATACTTTTCATGACATGAATTCATTATGCTCGTTATATATGGCATGTCATAGCATCTCATAGGGCATAAACATAATTATAGCAATATAACAAACATGAGCAAAAATAAAAAATAAGATAGAATAATTTCACTTAAAAGAGCCATAGGATACGTGATAATTCATGTTTCAATTCATCCAACTTGATAATCATGTTTCAATTCATCCAACTTAGCCCATAGGCGTTCCGACATGAAATCAACTTACAAGGTTATCCTAAGCTAATGTCACTCACTTTTCTCTTAGCTGGCAGTAGCCTAGTAATTTAGTTGTGGTCCAATTCCACCTATAATGTCCATGGCTTCGAACTTAGAACACATTCAAGAAACTAACTCGACCTAATTCTTCTAAATTGATCTAAAATAGTTCTAAATACATCAAATTTGAAAAATCATTGCTTTACTGGTCTCAATTGCCTTCAATTACTTAAAAAACAGTTCTATAATGATCCATAGTGGTAGTACAAGGTCAAAAATCCAAAACAAAGCTGCCGATTCTAAACATTTGGATGGCGTCTCGGCTCAACGGCTTCCTTGGCTTAGACAACTTTGTTTGGGTTTTGACCCTATTTCACTATTTAGGACCATTTCGTAGCTGATTTTGAAGTAATTGAAGACATTTGACGTTAGTAAGGCTATTGTTTTGCCAATTTGATATATTAAGAGTTGTTTTGGATCAATTTAGGAGAATTAGGTGAAACTAATTTCTTGTATGTGTTCCAAGTTTAATGCCATGAAACGTCATAGGTGGAATGAGACCACGACAAATACAATTAGGTTATTACCAACTAATGGAAGTAAATGACATTGGCTTAGGCTAACACTGTAAGTCGGTTTACTAAATGACGAACTAGATTGGATGAACTGAGTGAAGTATAGATTGGATGAAGAATTGAGCAAAGCACGAATATCATGTAAACTATGACTTTTTTATGTGATATTATTCTATCTTATGATGTTGGAGTGAGCCTTCGTGATGCATGTACTTCCTGATCTTTACTCATGTTTACTATATCACTATGATTATGTTTATATGCCCTATGGAGATACTATGACGCACCATGTATGAACATGTAAGCACGTCTCATTAGGAACTCATGTCTGAAAAATATGGAAGTACTATCACGTCATTACATTGTACCCTGATTTTCAATGCAGGACCTCATGTATGTTGTATGTCACGAGCGTGAATTACTTCTCTAATATGTTACATACGGATGCGTGACCACAATATTAAGTGCTCTCTTTTTTTTTTTTTGTTGGTTTCCAGTAGCGTGAGTATGTGCTAGCCCATAGTCAGGCCTAGGTGGTATGTATATGAGCCCGCCTAGTGGACTCTTACGTGCGTTCGTGAACTATTTATAGATAAGCATTATGCATCTAACCCTTCTTGAAAAAGAGAGTAAAACCTAAGGAATAGTTAGGAAAAGTAAGTTTCACCCGCCATGAACCATGTTGTATGTAATTGCATTTTTTGACCTCAATAGTGGAGTTGCTTACTGAATATTTTTAAATACTCATCTTATGTCTATCATTTTTTCCCGTAAAAACAAGAGCATCATGTACCAATGTCACGGTGGAGGCCATTGAATAAAGTAGATTAGTAGCATTTTTATTTCTGAACTTTAATTGAGGATGTTTTCTTTCCTATTTCGATTATGCTTGCAATATTTATGAACCTTTTAAGTCTATGATGAAATGTTTTAAATGATTTTCTTCACATAGTAGTCATTGACGTACATGTAGAATATTTGAACGCAAGAAACGGAATAATGTTCCATTTCTCAATCACTCAAGTTTCTTCTTTGGGGAGCATTTATCTTTTTTAGTGTCTCCATCCTTTTCAAATGCTTTAGAATATTTGAACGCAAGAAACGGAATAATGTTCCAAATGATTGATATGCTAAGGGATGAGCTTTGAGACTGGTATTCTTGTAGCTTCTTCTGGGTATATTTTTGTGAGAATCCCATGGTGTGTGGAGAGGAGAACGAAACACCCTTTATAAGGGTGTGGAAACCTTTCCCTAGCAGACACGCTTTAAAGCCTTGAGGGAAAGCCCGTAAGGGAAAGCCGAAAGAGGACAATATCGGCTAATGGTGGGCCTGAGCCATTACAAATGGTGTTAGAGCCAGACATCGGGCGATGTGTTAGCGAGGAGGCTATTCCCCGAAGGGGGTAGACATGAGGCAGTGTGTTGGTAAGGACGTTGGGCCCTGAAGGGGGTGGATTTGGTGAGGGTCCCACATCGATTGGAGAAAGGAACGAGTGCCAACGAGGACGTTGGGCCCCTTGAGAGGGGTGGATTGTGAAAATCCCGCATTAGTTGGGGGAGGAGAACGAAACACCCTTTATAAGGGTGTGGAATCCTTTCCCTAACAGATGCGTTTTAAAGCCTTGAGGGGAAGCCCGCAAGGGAAAAAGAAGACAATATCTGCTAGCGGTGAGATTGAGCCGTTACAATTTTCTTTACTCTTTTGCAGCTTTTTATCCATTAAATATGCTTCATATTCTGTTGGCTTGGTTGTGAGGGTTTCAACTTTTTGCACATCTTATTTATCCATTAAATATGCTTCGAAAAGCGAGAGAAAAAGAAGCACGTGCACTCAACGCAGTTCGTTTTTAATGCATATAAGCATTTGTTCTGTATCACTAAAACCTCAAAAAGTTTCTATTGCTTGTCAAAGGAAAAAGAACTTAATCTAGTTGTAGTTTACCCGAACGTTAAGAAAAATTCTTTTGGTGGTCTCGACTCAAGAAATGAAGTAAAAATAAAATCTATTCTAGCTGTATTATTTTCGTTACACGCAAGGCATCATCAATTCTATTGCTTCAAAATCTAATGCAGGGCCGCTACGAAATCATCTCTCTATCAGGTTCCTTCTTGATTTCCGACAATAATGGTAATCGAAGTCGAACCGGTGGTTTAAGTGTGTCTCTAGCAAGTGCAGATGGTCAAGTTCTTGGTGGAGTGACCAACATGCTAACAGCAGCATCTACAGTTCAGGTATTAGCCTGACATAATGTTGATATTTCCCTTTCTAGATGGATTTTGTGCCTTAAACCATGTCTTTGGTGCAAAATCAGGTCATAGTCGGTAGCTTTCTCGTCGATGGGAAAAAGCTAGGCGATAATATACAGAAATCTGGGCCATCTTCGACATCACCCAATATGTTAAACTTTAATACACCCGTGGCAGCAGGCTGTCCGTCTGAAGGCGCTTCAAATAACTCATCCGACGACAATGGTGGAAGCCCTTTAAGCCGGGGGCCGGGAATGTACACCAACGCCAACCAACCAATTCATAATATGCAGATGTATCAATTATGGGGTAGTCGAAATCAATAATGAAGCTGCTTGCTCGCCCAACTTAACAGTGTACTGCATTCGGTGTCGTCGAAGGGGTTAGTGTTTTGCATCTCGATGTATAGAGGTTAGTCCTGGATTCTGTCCCTAACATGAATTGCGCAAACCGTAACCGTAACGTTTCTAGATTCTCTATTGATGTTTCAGCTGCTGGTTAGCTTTATTTATAGTCAGTTCAAATTGCCTTCTTTAACATTACTCCATGAACGAGGAGTTTCTGAAGATTGTGGTAAATCATATACAGATTGGGATGTCTCCTTTTCTCATGGAAAAGCCATGAAGTTGAGTTCATATGATATGATATTCATTTAGGTTCATATCAAGATTGTCCCTATTAATTCAATTTTAATATCATTTTTAGGAGAATTCTTTAGTTTCTTTGGATTTTGTTGCTGAAATAGGTGATTCTGTGATCTAGAGCTATGTGTAAAATTCAAAATTCATTTGTGCACCATATATGATGTTCTGCTGACCCTATTAGACATGTATAAACTGTATTTGATCTCGGTTCTAAACATAATTTCATT

mRNA sequence

GGTTGTCTCTCCTTTCCTTGTCTGTTCACTTGTCACTAACCACTGATCGAACAAATTAGCAACACGAATCACTGAACCAACAATTTCCTTTTTCTTGCTTCTTCCTTTATAAATCCAAACAAAAATCGAAGAACAAGAAAGGATTCTTTCTCCGTTCTTCCCACATTCCCCCATCTGATTTTCCGCCATGGATTCACGAGAGAGGTCGATGCCTTCTGTTCATCAACATCACCAACAATCAACTCCACCAAACAGGATGATGGGCAACGCTTCCTATTCCACAAATTTACCCAATACCAACAATTCTTCCCAAATGATCAACCCCAATTCCGCCGCTGCTCAAATCATGTCCTCCGCCTCCCGATTTCCCTTCAACTCCATGATGGGGTCCGCTTCTAAGCCCTCCGACTCTCCCAATACGGCTTCTTATGATGGATCGCATTCCGAATTGCGGACTGGTGGGTTTAACATTGATTCCGGGAAGAAGAAGCGAGGCCGACCCAGAAAGTATTCCCCTGATGGGAATATCGCCTTGGGTTTAGCGCCAACAACCATCACTAATTCCGCCGTTCCCGGCGATTCTTCCGGCATGAACTCCTCGGATCCTCGCCCTAAGAAGAACAGAGGACGGCCTCCCGGTACAGGGAAGAAGCAAATGGATGCTTTGGGGACTGGCGGTGTTGGCTTTACTCCGCATGTCATTCTGGTGAATCCAGGAGAGGATATTGCCTCAAAAGTTATGTCATTTTCACAGCAGGGGCCGCGAACCATTTGTATTCTCTCTGCCCATGGTGCTGTTTGCAATGTTACCCTTCACCAACCCGCAGCTGGTAGTGTGACATATGAGGGCCGCTACGAAATCATCTCTCTATCAGGTTCCTTCTTGATTTCCGACAATAATGGTAATCGAAGTCGAACCGGTGGTTTAAGTGTGTCTCTAGCAAGTGCAGATGGTCAAGTTCTTGGTGGAGTGACCAACATGCTAACAGCAGCATCTACAGTTCAGGTCATAGTCGGTAGCTTTCTCGTCGATGGGAAAAAGCTAGGCGATAATATACAGAAATCTGGGCCATCTTCGACATCACCCAATATGTTAAACTTTAATACACCCGTGGCAGCAGGCTGTCCGTCTGAAGGCGCTTCAAATAACTCATCCGACGACAATGGTGGAAGCCCTTTAAGCCGGGGGCCGGGAATGTACACCAACGCCAACCAACCAATTCATAATATGCAGATGTATCAATTATGGGGTAGTCGAAATCAATAATGAAGCTGCTTGCTCGCCCAACTTAACAGTGTACTGCATTCGGTGTCGTCGAAGGGGTTAGTGTTTTGCATCTCGATGTATAGAGGTTAGTCCTGGATTCTGTCCCTAACATGAATTGCGCAAACCGTAACCGTAACGTTTCTAGATTCTCTATTGATGTTTCAGCTGCTGGTTAGCTTTATTTATAGTCAGTTCAAATTGCCTTCTTTAACATTACTCCATGAACGAGGAGTTTCTGAAGATTGTGGTAAATCATATACAGATTGGGATGTCTCCTTTTCTCATGGAAAAGCCATGAAGTTGAGTTCATATGATATGATATTCATTTAGGTTCATATCAAGATTGTCCCTATTAATTCAATTTTAATATCATTTTTAGGAGAATTCTTTAGTTTCTTTGGATTTTGTTGCTGAAATAGGTGATTCTGTGATCTAGAGCTATGTGTAAAATTCAAAATTCATTTGTGCACCATATATGATGTTCTGCTGACCCTATTAGACATGTATAAACTGTATTTGATCTCGGTTCTAAACATAATTTCATT

Coding sequence (CDS)

ATGGATTCACGAGAGAGGTCGATGCCTTCTGTTCATCAACATCACCAACAATCAACTCCACCAAACAGGATGATGGGCAACGCTTCCTATTCCACAAATTTACCCAATACCAACAATTCTTCCCAAATGATCAACCCCAATTCCGCCGCTGCTCAAATCATGTCCTCCGCCTCCCGATTTCCCTTCAACTCCATGATGGGGTCCGCTTCTAAGCCCTCCGACTCTCCCAATACGGCTTCTTATGATGGATCGCATTCCGAATTGCGGACTGGTGGGTTTAACATTGATTCCGGGAAGAAGAAGCGAGGCCGACCCAGAAAGTATTCCCCTGATGGGAATATCGCCTTGGGTTTAGCGCCAACAACCATCACTAATTCCGCCGTTCCCGGCGATTCTTCCGGCATGAACTCCTCGGATCCTCGCCCTAAGAAGAACAGAGGACGGCCTCCCGGTACAGGGAAGAAGCAAATGGATGCTTTGGGGACTGGCGGTGTTGGCTTTACTCCGCATGTCATTCTGGTGAATCCAGGAGAGGATATTGCCTCAAAAGTTATGTCATTTTCACAGCAGGGGCCGCGAACCATTTGTATTCTCTCTGCCCATGGTGCTGTTTGCAATGTTACCCTTCACCAACCCGCAGCTGGTAGTGTGACATATGAGGGCCGCTACGAAATCATCTCTCTATCAGGTTCCTTCTTGATTTCCGACAATAATGGTAATCGAAGTCGAACCGGTGGTTTAAGTGTGTCTCTAGCAAGTGCAGATGGTCAAGTTCTTGGTGGAGTGACCAACATGCTAACAGCAGCATCTACAGTTCAGGTCATAGTCGGTAGCTTTCTCGTCGATGGGAAAAAGCTAGGCGATAATATACAGAAATCTGGGCCATCTTCGACATCACCCAATATGTTAAACTTTAATACACCCGTGGCAGCAGGCTGTCCGTCTGAAGGCGCTTCAAATAACTCATCCGACGACAATGGTGGAAGCCCTTTAAGCCGGGGGCCGGGAATGTACACCAACGCCAACCAACCAATTCATAATATGCAGATGTATCAATTATGGGGTAGTCGAAATCAATAA

Protein sequence

MDSRERSMPSVHQHHQQSTPPNRMMGNASYSTNLPNTNNSSQMINPNSAAAQIMSSASRFPFNSMMGSASKPSDSPNTASYDGSHSELRTGGFNIDSGKKKRGRPRKYSPDGNIALGLAPTTITNSAVPGDSSGMNSSDPRPKKNRGRPPGTGKKQMDALGTGGVGFTPHVILVNPGEDIASKVMSFSQQGPRTICILSAHGAVCNVTLHQPAAGSVTYEGRYEIISLSGSFLISDNNGNRSRTGGLSVSLASADGQVLGGVTNMLTAASTVQVIVGSFLVDGKKLGDNIQKSGPSSTSPNMLNFNTPVAAGCPSEGASNNSSDDNGGSPLSRGPGMYTNANQPIHNMQMYQLWGSRNQ

Homology

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BLAST of CmoCh16G012030 vs. ExPASy Swiss-Prot
Match: Q9FIR1 (AT-hook motif nuclear-localized protein 8 OS=Arabidopsis thaliana OX=3702 GN=AHL8 PE=2 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 9.8e-59
Identity = 187/419 (44.63%), Postives = 228/419 (54.42%), Query Frame = 0


Query: 1   MDSRERSMPSVHQHHQQSTPPNRMMGNASYSTNLPNTNNSSQMINPNSAAAQIMSSAS-- 60
           MDSR+  +P    H+Q   PP  +M               S   NPN+AA+ +M   S  
Sbjct: 1   MDSRD--IPP--SHNQLQPPPGMLM---------------SHYRNPNAAASPLMVPTSTS 60

Query: 61  ------RFPFNSMMGSAS----------------------KPSDSPNTASYDGSHSELRT 120
                 R PF +   S +                       PS  P     D  + +L+ 
Sbjct: 61  QPIQHPRLPFGNQQQSQTFHQQQQQQMDQKTLESLGFGDGSPSSQPMRFGIDDQNQQLQV 120

Query: 121 GGFNIDSGKKKRGRPRKYSPDGNIALGLAPTTITNSAVP--------GDSSGM-NSSDPR 180
                   KKKRGRPRKY+PDG+IALGLAPT+   SA          GDS G  NS DP 
Sbjct: 121 --------KKKRGRPRKYTPDGSIALGLAPTSPLLSAASNSYGEGGVGDSGGNGNSVDPP 180

Query: 181 PKKNRGRPPGTGKKQMDAL-GTGGVGFTPHVILVNPGEDIASKVMSFSQQGPRTICILSA 240
            K+NRGRPPG+ KKQ+DAL GT GVGFTPHVI VN GEDIASKVM+FS QG RTICILSA
Sbjct: 181 VKRNRGRPPGSSKKQLDALGGTSGVGFTPHVIEVNTGEDIASKVMAFSDQGSRTICILSA 240

Query: 241 HGAVCNVTLHQP--AAGSVTYEGRYEIISLSGSFLISDNNGNRSRTGGLSVSLASADGQV 300
            GAV  V L Q   ++G VTYEGR+EII+LSGS L  + NG+ +R+G LSV+LA  DG +
Sbjct: 241 SGAVSRVMLRQASHSSGIVTYEGRFEIITLSGSVLNYEVNGSTNRSGNLSVALAGPDGGI 300

Query: 301 LGG-VTNMLTAASTVQVIVGSFLVDGKK---LGDNI---QKSGPSSTSPNMLNFNTPVAA 360
           +GG V   L AA+ VQVIVGSF+ + KK      NI   Q   P+S   NMLNF      
Sbjct: 301 VGGSVVGNLVAATQVQVIVGSFVAEAKKPKQSSVNIARGQNPEPASAPANMLNF------ 360

[Close]

BLAST of CmoCh16G012030 vs. ExPASy Swiss-Prot
Match: Q940I0 (AT-hook motif nuclear-localized protein 13 OS=Arabidopsis thaliana OX=3702 GN=AHL13 PE=1 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 2.8e-58
Identity = 180/420 (42.86%), Postives = 236/420 (56.19%), Query Frame = 0


Query: 4   RERSMPSVHQHHQQSTPPNRMMGNASYSTNLPNTNNSSQMINPNSAAAQIMSSASRFPFN 63
           +++     H   QQ  PP  +M + +     PN   ++ ++  N++ +Q M    R PF 
Sbjct: 18  QQQQQQQQHLQQQQQPPPGMLMSHHNSYNRNPNA-AAAVLMGHNTSTSQAMH--QRLPFG 77

Query: 64  SMMGSASKPSD---------------SPNTASYDGSHSELRTG-------GFNIDSGKKK 123
             M S  +P                 +  +  +DGS S +          G +    KKK
Sbjct: 78  GSM-SPHQPQQHQYHHPQPQQQIDQKTLESLGFDGSPSSVAATQQHSMRFGIDHQQVKKK 137

Query: 124 RGRPRKYSPDG--------NIALGLAPTTITNSAV-----------PGDSSG--MNSSDP 183
           RGRPRKY+ DG        NIALGLAPT+   SA             GDS+G   NSSDP
Sbjct: 138 RGRPRKYAADGGGGGGGGSNIALGLAPTSPLPSASNSYGGGNEGGGGGDSAGANANSSDP 197

Query: 184 RPKKNRGRPPGTGKKQMDAL-GTGGVGFTPHVILVNPGEDIASKVMSFSQQGPRTICILS 243
             K+NRGRPPG+GKKQ+DAL GTGGVGFTPHVI V  GEDIA+K+++F+ QGPR ICILS
Sbjct: 198 PAKRNRGRPPGSGKKQLDALGGTGGVGFTPHVIEVKTGEDIATKILAFTNQGPRAICILS 257

Query: 244 AHGAVCNVTLHQP----AAGSVTYEGRYEIISLSGSFLISDNNGNRSRTGGLSVSLASAD 303
           A GAV NV L Q       G+V YEGR+EIISLSGSFL S++NG  ++TG LSVSLA  +
Sbjct: 258 ATGAVTNVMLRQANNSNPTGTVKYEGRFEIISLSGSFLNSESNGTVTKTGNLSVSLAGHE 317

Query: 304 GQVLGG-VTNMLTAASTVQVIVGSFLVDGKKLGDNIQKS----GPSSTSPNMLNFNTPVA 355
           G+++GG V  ML A S VQVIVGSF+ DG+K   +  ++     P+S   NML+F     
Sbjct: 318 GRIVGGCVDGMLVAGSQVQVIVGSFVPDGRKQKQSAGRAQNTPEPASAPANMLSFGGVGG 377

[Close]

BLAST of CmoCh16G012030 vs. ExPASy Swiss-Prot
Match: O22812 (AT-hook motif nuclear-localized protein 10 OS=Arabidopsis thaliana OX=3702 GN=AHL10 PE=1 SV=2)

HSP 1 Score: 190.3 bits (482), Expect = 3.9e-47
Identity = 136/296 (45.95%), Postives = 179/296 (60.47%), Query Frame = 0


Query: 62  FNSMMGSASKPSD-SPNTASYDGSHSELRTG----------GFNIDSGKKKRGRPRKYSP 121
           +   M S S P    PN+A   G +S L             G   +  KK+RGRPRKY P
Sbjct: 52  YKQPMRSVSPPQQYQPNSA---GENSVLNMNLPGGESGGMTGTGSEPVKKRRGRPRKYGP 111

Query: 122 D-GNIALGLAPTTITNSAVPGDSSGMNSSDPRPKKNRGRPPGTGKK--QMDALGTGGVGF 181
           D G ++LGL P    +  V   SSG +  +    K RGRPPG+  K  ++ ALG+ G+GF
Sbjct: 112 DSGEMSLGLNPGA-PSFTVSQPSSGGDGGE----KKRGRPPGSSSKRLKLQALGSTGIGF 171

Query: 182 TPHVILVNPGEDIASKVMSFSQQGPRTICILSAHGAVCNVTLHQPA--AGSVTYEGRYEI 241
           TPHV+ V  GED++SK+M+ +  GPR +C+LSA+GA+ NVTL Q A   G+VTYEGR+EI
Sbjct: 172 TPHVLTVLAGEDVSSKIMALTHNGPRAVCVLSANGAISNVTLRQSATSGGTVTYEGRFEI 231

Query: 242 ISLSGSFLISDNNGNRSRTGGLSVSLASADGQVLGG-VTNMLTAASTVQVIVGSFLVDG- 301
           +SLSGSF + +NNG RSRTGGLSVSL+S DG VLGG V  +L AAS VQ++VGSFL DG 
Sbjct: 232 LSLSGSFHLLENNGQRSRTGGLSVSLSSPDGNVLGGSVAGLLIAASPVQIVVGSFLPDGE 291

Query: 302 KKLGDNIQKSGPSS-TSPNMLNFNTPVAAGCP-SEGASNNSSDDNG-GSPLSRGPG 337
           K+   ++ + G SS   P +      +    P S G  + SS   G GSP+ +  G
Sbjct: 292 KEPKQHVGQMGLSSPVLPRVAPTQVLMTPSSPQSRGTMSESSCGGGHGSPIHQSTG 339

[Close]

BLAST of CmoCh16G012030 vs. ExPASy Swiss-Prot
Match: Q8GXB3 (AT-hook motif nuclear-localized protein 5 OS=Arabidopsis thaliana OX=3702 GN=AHL5 PE=1 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 3.1e-44
Identity = 122/269 (45.35%), Postives = 160/269 (59.48%), Query Frame = 0


Query: 99  KKKRGRPRKYSPDGNIALGLAPTTITNSAVPGDSSGMNSSDPR-PKKNRGRPPGTGKKQM 158
           KKKRGRPRKY PDG ++LGL+P     S    DSS M  SDP  PK+ RGRPPGTG+KQ 
Sbjct: 105 KKKRGRPRKYVPDGQVSLGLSPMPCV-SKKSKDSSSM--SDPNAPKRARGRPPGTGRKQR 164

Query: 159 DA-LG-----TGGVGFTPHVILVNPGEDIASKVMSFSQQGPRTICILSAHGAVCNVTLHQ 218
            A LG     + G+ F PHVI V  GEDI SKV+SFSQ+ PR +CI+S  G V +VTL +
Sbjct: 165 LANLGEWMNTSAGLAFAPHVISVGSGEDIVSKVLSFSQKRPRALCIMSGTGTVSSVTLRE 224

Query: 219 PAA--GSVTYEGRYEIISLSGSFLISDNNGNRSRTGGLSVSLASADGQVLGGVTNMLTAA 278
           PA+   S+T+EGR+EI+SL GS+L+++  G++SRTGGLSVSL+  +G V+GG   ML AA
Sbjct: 225 PASTTPSLTFEGRFEILSLGGSYLVNEEGGSKSRTGGLSVSLSGPEGHVIGGGIGMLIAA 284

Query: 279 STVQVIVGSFLVDGKKLGDNIQKSGPSSTSPNMLNFNTPVAAGCPSEGASNNSSDDNGGS 338
           S VQV+  SF+               +S   N  N  T      P +  +N+  +   GS
Sbjct: 285 SLVQVVACSFVYG-------------ASAKSNNNNNKTIKQEIKPKQEPTNSEMETTPGS 344

Query: 339 --PLSRGPGMYTNANQPIHNMQMYQLWGS 357
               +   G +T  N P   M  + + GS
Sbjct: 345 APEAAASTGQHTPQNFPAQGMSGWPVSGS 357

[Close]

BLAST of CmoCh16G012030 vs. ExPASy Swiss-Prot
Match: O80834 (AT-hook motif nuclear-localized protein 9 OS=Arabidopsis thaliana OX=3702 GN=AHL9 PE=2 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 9.8e-43
Identity = 108/237 (45.57%), Postives = 156/237 (65.82%), Query Frame = 0


Query: 99  KKKRGRPRKYSPDGNIALGLAPTTITNSAVPGDSSGMNSSDPRPKKNRGRPPGTGKKQ-M 158
           K+KRGRPRKY  DG+++L L+ +++ ++  P +S+         K+ RGRPPG+GKKQ M
Sbjct: 98  KRKRGRPRKYGQDGSVSLALSSSSV-STITPNNSN---------KRGRGRPPGSGKKQRM 157

Query: 159 DALG-----TGGVGFTPHVILVNPGEDIASKVMSFSQQGPRTICILSAHGAVCNVTLHQP 218
            ++G     + G+ FTPHVI V+ GEDIASKV++FSQQGPR IC+LSA GAV   TL QP
Sbjct: 158 ASVGELMPSSSGMSFTPHVIAVSIGEDIASKVIAFSQQGPRAICVLSASGAVSTATLIQP 217

Query: 219 AA--GSVTYEGRYEIISLSGSFLISDNNGNRSRTGGLSVSLASADGQVLGG-VTNMLTAA 278
           +A  G++ YEGR+EI++LS S++++ +   R+RTG LSVSLAS DG+V+GG +   L AA
Sbjct: 218 SASPGAIKYEGRFEILALSTSYIVATDGSFRNRTGNLSVSLASPDGRVIGGAIGGPLIAA 277

Query: 279 STVQVIVGSFL-----VDGKKLGDNIQKSGPSSTSPNMLNFNTPVAAGCPSEGASNN 322
           S VQVIVGSF+     +  KK  +   +    +   ++L+ N    +  P +  + N
Sbjct: 278 SPVQVIVGSFIWAAPKIKSKKREEEASEVVQETDDHHVLDNNNNTISPVPQQQPNQN 324

[Close]

BLAST of CmoCh16G012030 vs. ExPASy TrEMBL
Match: A0A6J1HJE2 (AT-hook motif nuclear-localized protein OS=Cucurbita maxima OX=3661 GN=LOC111465055 PE=4 SV=1)

HSP 1 Score: 696.0 bits (1795), Expect = 8.0e-197
Identity = 359/359 (100.00%), Postives = 359/359 (100.00%), Query Frame = 0


Query: 1   MDSRERSMPSVHQHHQQSTPPNRMMGNASYSTNLPNTNNSSQMINPNSAAAQIMSSASRF 60
           MDSRERSMPSVHQHHQQSTPPNRMMGNASYSTNLPNTNNSSQMINPNSAAAQIMSSASRF
Sbjct: 1   MDSRERSMPSVHQHHQQSTPPNRMMGNASYSTNLPNTNNSSQMINPNSAAAQIMSSASRF 60

Query: 61  PFNSMMGSASKPSDSPNTASYDGSHSELRTGGFNIDSGKKKRGRPRKYSPDGNIALGLAP 120
           PFNSMMGSASKPSDSPNTASYDGSHSELRTGGFNIDSGKKKRGRPRKYSPDGNIALGLAP
Sbjct: 61  PFNSMMGSASKPSDSPNTASYDGSHSELRTGGFNIDSGKKKRGRPRKYSPDGNIALGLAP 120

Query: 121 TTITNSAVPGDSSGMNSSDPRPKKNRGRPPGTGKKQMDALGTGGVGFTPHVILVNPGEDI 180
           TTITNSAVPGDSSGMNSSDPRPKKNRGRPPGTGKKQMDALGTGGVGFTPHVILVNPGEDI
Sbjct: 121 TTITNSAVPGDSSGMNSSDPRPKKNRGRPPGTGKKQMDALGTGGVGFTPHVILVNPGEDI 180

Query: 181 ASKVMSFSQQGPRTICILSAHGAVCNVTLHQPAAGSVTYEGRYEIISLSGSFLISDNNGN 240
           ASKVMSFSQQGPRTICILSAHGAVCNVTLHQPAAGSVTYEGRYEIISLSGSFLISDNNGN
Sbjct: 181 ASKVMSFSQQGPRTICILSAHGAVCNVTLHQPAAGSVTYEGRYEIISLSGSFLISDNNGN 240

Query: 241 RSRTGGLSVSLASADGQVLGGVTNMLTAASTVQVIVGSFLVDGKKLGDNIQKSGPSSTSP 300
           RSRTGGLSVSLASADGQVLGGVTNMLTAASTVQVIVGSFLVDGKKLGDNIQKSGPSSTSP
Sbjct: 241 RSRTGGLSVSLASADGQVLGGVTNMLTAASTVQVIVGSFLVDGKKLGDNIQKSGPSSTSP 300

Query: 301 NMLNFNTPVAAGCPSEGASNNSSDDNGGSPLSRGPGMYTNANQPIHNMQMYQLWGSRNQ 360
           NMLNFNTPVAAGCPSEGASNNSSDDNGGSPLSRGPGMYTNANQPIHNMQMYQLWGSRNQ
Sbjct: 301 NMLNFNTPVAAGCPSEGASNNSSDDNGGSPLSRGPGMYTNANQPIHNMQMYQLWGSRNQ 359

[Close]

BLAST of CmoCh16G012030 vs. ExPASy TrEMBL
Match: A0A6J1E6L1 (AT-hook motif nuclear-localized protein OS=Cucurbita moschata OX=3662 GN=LOC111431178 PE=4 SV=1)

HSP 1 Score: 696.0 bits (1795), Expect = 8.0e-197
Identity = 359/359 (100.00%), Postives = 359/359 (100.00%), Query Frame = 0


Query: 1   MDSRERSMPSVHQHHQQSTPPNRMMGNASYSTNLPNTNNSSQMINPNSAAAQIMSSASRF 60
           MDSRERSMPSVHQHHQQSTPPNRMMGNASYSTNLPNTNNSSQMINPNSAAAQIMSSASRF
Sbjct: 1   MDSRERSMPSVHQHHQQSTPPNRMMGNASYSTNLPNTNNSSQMINPNSAAAQIMSSASRF 60

Query: 61  PFNSMMGSASKPSDSPNTASYDGSHSELRTGGFNIDSGKKKRGRPRKYSPDGNIALGLAP 120
           PFNSMMGSASKPSDSPNTASYDGSHSELRTGGFNIDSGKKKRGRPRKYSPDGNIALGLAP
Sbjct: 61  PFNSMMGSASKPSDSPNTASYDGSHSELRTGGFNIDSGKKKRGRPRKYSPDGNIALGLAP 120

Query: 121 TTITNSAVPGDSSGMNSSDPRPKKNRGRPPGTGKKQMDALGTGGVGFTPHVILVNPGEDI 180
           TTITNSAVPGDSSGMNSSDPRPKKNRGRPPGTGKKQMDALGTGGVGFTPHVILVNPGEDI
Sbjct: 121 TTITNSAVPGDSSGMNSSDPRPKKNRGRPPGTGKKQMDALGTGGVGFTPHVILVNPGEDI 180

Query: 181 ASKVMSFSQQGPRTICILSAHGAVCNVTLHQPAAGSVTYEGRYEIISLSGSFLISDNNGN 240
           ASKVMSFSQQGPRTICILSAHGAVCNVTLHQPAAGSVTYEGRYEIISLSGSFLISDNNGN
Sbjct: 181 ASKVMSFSQQGPRTICILSAHGAVCNVTLHQPAAGSVTYEGRYEIISLSGSFLISDNNGN 240

Query: 241 RSRTGGLSVSLASADGQVLGGVTNMLTAASTVQVIVGSFLVDGKKLGDNIQKSGPSSTSP 300
           RSRTGGLSVSLASADGQVLGGVTNMLTAASTVQVIVGSFLVDGKKLGDNIQKSGPSSTSP
Sbjct: 241 RSRTGGLSVSLASADGQVLGGVTNMLTAASTVQVIVGSFLVDGKKLGDNIQKSGPSSTSP 300

Query: 301 NMLNFNTPVAAGCPSEGASNNSSDDNGGSPLSRGPGMYTNANQPIHNMQMYQLWGSRNQ 360
           NMLNFNTPVAAGCPSEGASNNSSDDNGGSPLSRGPGMYTNANQPIHNMQMYQLWGSRNQ
Sbjct: 301 NMLNFNTPVAAGCPSEGASNNSSDDNGGSPLSRGPGMYTNANQPIHNMQMYQLWGSRNQ 359

[Close]

BLAST of CmoCh16G012030 vs. ExPASy TrEMBL
Match: A0A5D3CHX0 (AT-hook motif nuclear-localized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G001670 PE=4 SV=1)

HSP 1 Score: 620.2 bits (1598), Expect = 5.6e-174
Identity = 326/363 (89.81%), Postives = 346/363 (95.32%), Query Frame = 0


Query: 1   MDSRERSMPSVHQHHQQSTPPNRMM-GNASYSTNLPNTNNSSQMINPNSAAAQIMSSASR 60
           MDSRERSMPSVHQHHQQSTPPNRM+  NASYS N+PN+NN+S +INPNSAAAQ+MSSASR
Sbjct: 1   MDSRERSMPSVHQHHQQSTPPNRMIPNNASYSANMPNSNNTSPLINPNSAAAQMMSSASR 60

Query: 61  FPFNSMMGSASKPSDSPNTASYDGSHSELRTGGFNIDSGKKKRGRPRKYSPDGNIALGLA 120
           FPFNSMMGS+SKPS+SPN ASYDGS SELRTGGFNIDSGKKKRGRPRKYSPDGNIALGL+
Sbjct: 61  FPFNSMMGSSSKPSESPNAASYDGSQSELRTGGFNIDSGKKKRGRPRKYSPDGNIALGLS 120

Query: 121 PTTITNSAVPGDSSGMNSSDPRPKKNRGRPPGTGKKQMDALGTGGVGFTPHVILVNPGED 180
           PT IT+SAVP DS+GM+S DPRPKKNRGRPPGTGKKQMDALGTGGVGFTPHVILV PGED
Sbjct: 121 PTPITSSAVPADSAGMHSPDPRPKKNRGRPPGTGKKQMDALGTGGVGFTPHVILVKPGED 180

Query: 181 IASKVMSFSQQGPRTICILSAHGAVCNVTLHQPA--AGSVTYEGRYEIISLSGSFLISDN 240
           IASKVM+FSQQGPRT+CILSAHGAVCNVTL QPA  +GSV+YEGRYEIISLSGSFLIS+N
Sbjct: 181 IASKVMAFSQQGPRTVCILSAHGAVCNVTL-QPALSSGSVSYEGRYEIISLSGSFLISEN 240

Query: 241 NGNRSRTGGLSVSLASADGQVLGGVTNMLTAASTVQVIVGSFLVDGKKLGDNIQKSGPSS 300
           NGNRSR+GGLSVSLASADGQVLGG+TNMLTAASTVQVIVGSFLVDGKKLG +IQKSGPSS
Sbjct: 241 NGNRSRSGGLSVSLASADGQVLGGITNMLTAASTVQVIVGSFLVDGKKLGASIQKSGPSS 300

Query: 301 TSPNMLNFNTPVAAGCPSEGASNNSSDDNGGSPLSRGPGMYTNANQPIHNMQMY-QLWGS 360
           TSPNMLNF TPVAAGCPSEGASNNSSDDNGGSPLSRGPGMYTNANQPIHNMQMY QLW S
Sbjct: 301 TSPNMLNFGTPVAAGCPSEGASNNSSDDNGGSPLSRGPGMYTNANQPIHNMQMYQQLWAS 360

[Close]

BLAST of CmoCh16G012030 vs. ExPASy TrEMBL
Match: A0A1S3BL68 (AT-hook motif nuclear-localized protein OS=Cucumis melo OX=3656 GN=LOC103490790 PE=4 SV=1)

HSP 1 Score: 620.2 bits (1598), Expect = 5.6e-174
Identity = 326/363 (89.81%), Postives = 346/363 (95.32%), Query Frame = 0


Query: 1   MDSRERSMPSVHQHHQQSTPPNRMM-GNASYSTNLPNTNNSSQMINPNSAAAQIMSSASR 60
           MDSRERSMPSVHQHHQQSTPPNRM+  NASYS N+PN+NN+S +INPNSAAAQ+MSSASR
Sbjct: 1   MDSRERSMPSVHQHHQQSTPPNRMIPNNASYSANMPNSNNTSPLINPNSAAAQMMSSASR 60

Query: 61  FPFNSMMGSASKPSDSPNTASYDGSHSELRTGGFNIDSGKKKRGRPRKYSPDGNIALGLA 120
           FPFNSMMGS+SKPS+SPN ASYDGS SELRTGGFNIDSGKKKRGRPRKYSPDGNIALGL+
Sbjct: 61  FPFNSMMGSSSKPSESPNAASYDGSQSELRTGGFNIDSGKKKRGRPRKYSPDGNIALGLS 120

Query: 121 PTTITNSAVPGDSSGMNSSDPRPKKNRGRPPGTGKKQMDALGTGGVGFTPHVILVNPGED 180
           PT IT+SAVP DS+GM+S DPRPKKNRGRPPGTGKKQMDALGTGGVGFTPHVILV PGED
Sbjct: 121 PTPITSSAVPADSAGMHSPDPRPKKNRGRPPGTGKKQMDALGTGGVGFTPHVILVKPGED 180

Query: 181 IASKVMSFSQQGPRTICILSAHGAVCNVTLHQPA--AGSVTYEGRYEIISLSGSFLISDN 240
           IASKVM+FSQQGPRT+CILSAHGAVCNVTL QPA  +GSV+YEGRYEIISLSGSFLIS+N
Sbjct: 181 IASKVMAFSQQGPRTVCILSAHGAVCNVTL-QPALSSGSVSYEGRYEIISLSGSFLISEN 240

Query: 241 NGNRSRTGGLSVSLASADGQVLGGVTNMLTAASTVQVIVGSFLVDGKKLGDNIQKSGPSS 300
           NGNRSR+GGLSVSLASADGQVLGG+TNMLTAASTVQVIVGSFLVDGKKLG +IQKSGPSS
Sbjct: 241 NGNRSRSGGLSVSLASADGQVLGGITNMLTAASTVQVIVGSFLVDGKKLGASIQKSGPSS 300

Query: 301 TSPNMLNFNTPVAAGCPSEGASNNSSDDNGGSPLSRGPGMYTNANQPIHNMQMY-QLWGS 360
           TSPNMLNF TPVAAGCPSEGASNNSSDDNGGSPLSRGPGMYTNANQPIHNMQMY QLW S
Sbjct: 301 TSPNMLNFGTPVAAGCPSEGASNNSSDDNGGSPLSRGPGMYTNANQPIHNMQMYQQLWAS 360

[Close]

BLAST of CmoCh16G012030 vs. ExPASy TrEMBL
Match: A0A0A0L1A5 (AT-hook motif nuclear-localized protein OS=Cucumis sativus OX=3659 GN=Csa_3G011720 PE=4 SV=1)

HSP 1 Score: 619.0 bits (1595), Expect = 1.2e-173
Identity = 325/363 (89.53%), Postives = 346/363 (95.32%), Query Frame = 0


Query: 1   MDSRERSMPSVHQHHQQSTPPNRMM-GNASYSTNLPNTNNSSQMINPNSAAAQIMSSASR 60
           MDSRERSMPSVHQHHQQSTPPNRM+  NASYS N+PN+NN+S +INPNSAAAQ+MSSASR
Sbjct: 1   MDSRERSMPSVHQHHQQSTPPNRMIPNNASYSANMPNSNNTSPLINPNSAAAQMMSSASR 60

Query: 61  FPFNSMMGSASKPSDSPNTASYDGSHSELRTGGFNIDSGKKKRGRPRKYSPDGNIALGLA 120
           FPFNSMMGS+SKPS+SPN ASYDGS SELRTGGFNIDSGKKKRGRPRKYSPDGNIALGL+
Sbjct: 61  FPFNSMMGSSSKPSESPNAASYDGSQSELRTGGFNIDSGKKKRGRPRKYSPDGNIALGLS 120

Query: 121 PTTITNSAVPGDSSGMNSSDPRPKKNRGRPPGTGKKQMDALGTGGVGFTPHVILVNPGED 180
           PT IT+SAVP DS+GM+S DPRPKKNRGRPPGTGK+QMDALGTGGVGFTPHVILV PGED
Sbjct: 121 PTPITSSAVPADSAGMHSPDPRPKKNRGRPPGTGKRQMDALGTGGVGFTPHVILVKPGED 180

Query: 181 IASKVMSFSQQGPRTICILSAHGAVCNVTLHQPA--AGSVTYEGRYEIISLSGSFLISDN 240
           IASKVM+FSQQGPRT+CILSAHGAVCNVTL QPA  +GSV+YEGRYEIISLSGSFLIS+N
Sbjct: 181 IASKVMAFSQQGPRTVCILSAHGAVCNVTL-QPALSSGSVSYEGRYEIISLSGSFLISEN 240

Query: 241 NGNRSRTGGLSVSLASADGQVLGGVTNMLTAASTVQVIVGSFLVDGKKLGDNIQKSGPSS 300
           NGNRSR+GGLSVSLASADGQVLGG+TNMLTAASTVQVIVGSFLVDGKKLG +IQKSGPSS
Sbjct: 241 NGNRSRSGGLSVSLASADGQVLGGITNMLTAASTVQVIVGSFLVDGKKLGASIQKSGPSS 300

Query: 301 TSPNMLNFNTPVAAGCPSEGASNNSSDDNGGSPLSRGPGMYTNANQPIHNMQMY-QLWGS 360
           TSPNMLNF TPVAAGCPSEGASNNSSDDNGGSPLSRGPGMYTNANQPIHNMQMY QLW S
Sbjct: 301 TSPNMLNFGTPVAAGCPSEGASNNSSDDNGGSPLSRGPGMYTNANQPIHNMQMYQQLWAS 360

[Close]

BLAST of CmoCh16G012030 vs. TAIR 10
Match: AT5G46640.1 (AT hook motif DNA-binding family protein )

HSP 1 Score: 228.8 bits (582), Expect = 6.9e-60
Identity = 187/419 (44.63%), Postives = 228/419 (54.42%), Query Frame = 0


Query: 1   MDSRERSMPSVHQHHQQSTPPNRMMGNASYSTNLPNTNNSSQMINPNSAAAQIMSSAS-- 60
           MDSR+  +P    H+Q   PP  +M               S   NPN+AA+ +M   S  
Sbjct: 1   MDSRD--IPP--SHNQLQPPPGMLM---------------SHYRNPNAAASPLMVPTSTS 60

Query: 61  ------RFPFNSMMGSAS----------------------KPSDSPNTASYDGSHSELRT 120
                 R PF +   S +                       PS  P     D  + +L+ 
Sbjct: 61  QPIQHPRLPFGNQQQSQTFHQQQQQQMDQKTLESLGFGDGSPSSQPMRFGIDDQNQQLQV 120

Query: 121 GGFNIDSGKKKRGRPRKYSPDGNIALGLAPTTITNSAVP--------GDSSGM-NSSDPR 180
                   KKKRGRPRKY+PDG+IALGLAPT+   SA          GDS G  NS DP 
Sbjct: 121 --------KKKRGRPRKYTPDGSIALGLAPTSPLLSAASNSYGEGGVGDSGGNGNSVDPP 180

Query: 181 PKKNRGRPPGTGKKQMDAL-GTGGVGFTPHVILVNPGEDIASKVMSFSQQGPRTICILSA 240
            K+NRGRPPG+ KKQ+DAL GT GVGFTPHVI VN GEDIASKVM+FS QG RTICILSA
Sbjct: 181 VKRNRGRPPGSSKKQLDALGGTSGVGFTPHVIEVNTGEDIASKVMAFSDQGSRTICILSA 240

Query: 241 HGAVCNVTLHQP--AAGSVTYEGRYEIISLSGSFLISDNNGNRSRTGGLSVSLASADGQV 300
            GAV  V L Q   ++G VTYEGR+EII+LSGS L  + NG+ +R+G LSV+LA  DG +
Sbjct: 241 SGAVSRVMLRQASHSSGIVTYEGRFEIITLSGSVLNYEVNGSTNRSGNLSVALAGPDGGI 300

Query: 301 LGG-VTNMLTAASTVQVIVGSFLVDGKK---LGDNI---QKSGPSSTSPNMLNFNTPVAA 360
           +GG V   L AA+ VQVIVGSF+ + KK      NI   Q   P+S   NMLNF      
Sbjct: 301 VGGSVVGNLVAATQVQVIVGSFVAEAKKPKQSSVNIARGQNPEPASAPANMLNF------ 360

[Close]

BLAST of CmoCh16G012030 vs. TAIR 10
Match: AT4G17950.1 (AT hook motif DNA-binding family protein )

HSP 1 Score: 227.3 bits (578), Expect = 2.0e-59
Identity = 180/420 (42.86%), Postives = 236/420 (56.19%), Query Frame = 0


Query: 4   RERSMPSVHQHHQQSTPPNRMMGNASYSTNLPNTNNSSQMINPNSAAAQIMSSASRFPFN 63
           +++     H   QQ  PP  +M + +     PN   ++ ++  N++ +Q M    R PF 
Sbjct: 18  QQQQQQQQHLQQQQQPPPGMLMSHHNSYNRNPNA-AAAVLMGHNTSTSQAMH--QRLPFG 77

Query: 64  SMMGSASKPSD---------------SPNTASYDGSHSELRTG-------GFNIDSGKKK 123
             M S  +P                 +  +  +DGS S +          G +    KKK
Sbjct: 78  GSM-SPHQPQQHQYHHPQPQQQIDQKTLESLGFDGSPSSVAATQQHSMRFGIDHQQVKKK 137

Query: 124 RGRPRKYSPDG--------NIALGLAPTTITNSAV-----------PGDSSG--MNSSDP 183
           RGRPRKY+ DG        NIALGLAPT+   SA             GDS+G   NSSDP
Sbjct: 138 RGRPRKYAADGGGGGGGGSNIALGLAPTSPLPSASNSYGGGNEGGGGGDSAGANANSSDP 197

Query: 184 RPKKNRGRPPGTGKKQMDAL-GTGGVGFTPHVILVNPGEDIASKVMSFSQQGPRTICILS 243
             K+NRGRPPG+GKKQ+DAL GTGGVGFTPHVI V  GEDIA+K+++F+ QGPR ICILS
Sbjct: 198 PAKRNRGRPPGSGKKQLDALGGTGGVGFTPHVIEVKTGEDIATKILAFTNQGPRAICILS 257

Query: 244 AHGAVCNVTLHQP----AAGSVTYEGRYEIISLSGSFLISDNNGNRSRTGGLSVSLASAD 303
           A GAV NV L Q       G+V YEGR+EIISLSGSFL S++NG  ++TG LSVSLA  +
Sbjct: 258 ATGAVTNVMLRQANNSNPTGTVKYEGRFEIISLSGSFLNSESNGTVTKTGNLSVSLAGHE 317

Query: 304 GQVLGG-VTNMLTAASTVQVIVGSFLVDGKKLGDNIQKS----GPSSTSPNMLNFNTPVA 355
           G+++GG V  ML A S VQVIVGSF+ DG+K   +  ++     P+S   NML+F     
Sbjct: 318 GRIVGGCVDGMLVAGSQVQVIVGSFVPDGRKQKQSAGRAQNTPEPASAPANMLSFGGVGG 377

[Close]

BLAST of CmoCh16G012030 vs. TAIR 10
Match: AT2G33620.1 (AT hook motif DNA-binding family protein )

HSP 1 Score: 190.3 bits (482), Expect = 2.7e-48
Identity = 136/296 (45.95%), Postives = 179/296 (60.47%), Query Frame = 0


Query: 62  FNSMMGSASKPSD-SPNTASYDGSHSELRTG----------GFNIDSGKKKRGRPRKYSP 121
           +   M S S P    PN+A   G +S L             G   +  KK+RGRPRKY P
Sbjct: 52  YKQPMRSVSPPQQYQPNSA---GENSVLNMNLPGGESGGMTGTGSEPVKKRRGRPRKYGP 111

Query: 122 D-GNIALGLAPTTITNSAVPGDSSGMNSSDPRPKKNRGRPPGTGKK--QMDALGTGGVGF 181
           D G ++LGL P    +  V   SSG +  +    K RGRPPG+  K  ++ ALG+ G+GF
Sbjct: 112 DSGEMSLGLNPGA-PSFTVSQPSSGGDGGE----KKRGRPPGSSSKRLKLQALGSTGIGF 171

Query: 182 TPHVILVNPGEDIASKVMSFSQQGPRTICILSAHGAVCNVTLHQPA--AGSVTYEGRYEI 241
           TPHV+ V  GED++SK+M+ +  GPR +C+LSA+GA+ NVTL Q A   G+VTYEGR+EI
Sbjct: 172 TPHVLTVLAGEDVSSKIMALTHNGPRAVCVLSANGAISNVTLRQSATSGGTVTYEGRFEI 231

Query: 242 ISLSGSFLISDNNGNRSRTGGLSVSLASADGQVLGG-VTNMLTAASTVQVIVGSFLVDG- 301
           +SLSGSF + +NNG RSRTGGLSVSL+S DG VLGG V  +L AAS VQ++VGSFL DG 
Sbjct: 232 LSLSGSFHLLENNGQRSRTGGLSVSLSSPDGNVLGGSVAGLLIAASPVQIVVGSFLPDGE 291

Query: 302 KKLGDNIQKSGPSS-TSPNMLNFNTPVAAGCP-SEGASNNSSDDNG-GSPLSRGPG 337
           K+   ++ + G SS   P +      +    P S G  + SS   G GSP+ +  G
Sbjct: 292 KEPKQHVGQMGLSSPVLPRVAPTQVLMTPSSPQSRGTMSESSCGGGHGSPIHQSTG 339

[Close]

BLAST of CmoCh16G012030 vs. TAIR 10
Match: AT2G33620.2 (AT hook motif DNA-binding family protein )

HSP 1 Score: 190.3 bits (482), Expect = 2.7e-48
Identity = 136/296 (45.95%), Postives = 179/296 (60.47%), Query Frame = 0


Query: 62  FNSMMGSASKPSD-SPNTASYDGSHSELRTG----------GFNIDSGKKKRGRPRKYSP 121
           +   M S S P    PN+A   G +S L             G   +  KK+RGRPRKY P
Sbjct: 52  YKQPMRSVSPPQQYQPNSA---GENSVLNMNLPGGESGGMTGTGSEPVKKRRGRPRKYGP 111

Query: 122 D-GNIALGLAPTTITNSAVPGDSSGMNSSDPRPKKNRGRPPGTGKK--QMDALGTGGVGF 181
           D G ++LGL P    +  V   SSG +  +    K RGRPPG+  K  ++ ALG+ G+GF
Sbjct: 112 DSGEMSLGLNPGA-PSFTVSQPSSGGDGGE----KKRGRPPGSSSKRLKLQALGSTGIGF 171

Query: 182 TPHVILVNPGEDIASKVMSFSQQGPRTICILSAHGAVCNVTLHQPA--AGSVTYEGRYEI 241
           TPHV+ V  GED++SK+M+ +  GPR +C+LSA+GA+ NVTL Q A   G+VTYEGR+EI
Sbjct: 172 TPHVLTVLAGEDVSSKIMALTHNGPRAVCVLSANGAISNVTLRQSATSGGTVTYEGRFEI 231

Query: 242 ISLSGSFLISDNNGNRSRTGGLSVSLASADGQVLGG-VTNMLTAASTVQVIVGSFLVDG- 301
           +SLSGSF + +NNG RSRTGGLSVSL+S DG VLGG V  +L AAS VQ++VGSFL DG 
Sbjct: 232 LSLSGSFHLLENNGQRSRTGGLSVSLSSPDGNVLGGSVAGLLIAASPVQIVVGSFLPDGE 291

Query: 302 KKLGDNIQKSGPSS-TSPNMLNFNTPVAAGCP-SEGASNNSSDDNG-GSPLSRGPG 337
           K+   ++ + G SS   P +      +    P S G  + SS   G GSP+ +  G
Sbjct: 292 KEPKQHVGQMGLSSPVLPRVAPTQVLMTPSSPQSRGTMSESSCGGGHGSPIHQSTG 339

[Close]

BLAST of CmoCh16G012030 vs. TAIR 10
Match: AT2G33620.3 (AT hook motif DNA-binding family protein )

HSP 1 Score: 190.3 bits (482), Expect = 2.7e-48
Identity = 136/296 (45.95%), Postives = 179/296 (60.47%), Query Frame = 0


Query: 62  FNSMMGSASKPSD-SPNTASYDGSHSELRTG----------GFNIDSGKKKRGRPRKYSP 121
           +   M S S P    PN+A   G +S L             G   +  KK+RGRPRKY P
Sbjct: 52  YKQPMRSVSPPQQYQPNSA---GENSVLNMNLPGGESGGMTGTGSEPVKKRRGRPRKYGP 111

Query: 122 D-GNIALGLAPTTITNSAVPGDSSGMNSSDPRPKKNRGRPPGTGKK--QMDALGTGGVGF 181
           D G ++LGL P    +  V   SSG +  +    K RGRPPG+  K  ++ ALG+ G+GF
Sbjct: 112 DSGEMSLGLNPGA-PSFTVSQPSSGGDGGE----KKRGRPPGSSSKRLKLQALGSTGIGF 171

Query: 182 TPHVILVNPGEDIASKVMSFSQQGPRTICILSAHGAVCNVTLHQPA--AGSVTYEGRYEI 241
           TPHV+ V  GED++SK+M+ +  GPR +C+LSA+GA+ NVTL Q A   G+VTYEGR+EI
Sbjct: 172 TPHVLTVLAGEDVSSKIMALTHNGPRAVCVLSANGAISNVTLRQSATSGGTVTYEGRFEI 231

Query: 242 ISLSGSFLISDNNGNRSRTGGLSVSLASADGQVLGG-VTNMLTAASTVQVIVGSFLVDG- 301
           +SLSGSF + +NNG RSRTGGLSVSL+S DG VLGG V  +L AAS VQ++VGSFL DG 
Sbjct: 232 LSLSGSFHLLENNGQRSRTGGLSVSLSSPDGNVLGGSVAGLLIAASPVQIVVGSFLPDGE 291

Query: 302 KKLGDNIQKSGPSS-TSPNMLNFNTPVAAGCP-SEGASNNSSDDNG-GSPLSRGPG 337
           K+   ++ + G SS   P +      +    P S G  + SS   G GSP+ +  G
Sbjct: 292 KEPKQHVGQMGLSSPVLPRVAPTQVLMTPSSPQSRGTMSESSCGGGHGSPIHQSTG 339

The following BLAST results are available for this feature:

BLAST of CmoCh16G012030 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FIR1	9.8e-59	44.63	AT-hook motif nuclear-localized protein 8 OS=Arabidopsis thaliana OX=3702 GN=AHL...	[more]
Q940I0	2.8e-58	42.86	AT-hook motif nuclear-localized protein 13 OS=Arabidopsis thaliana OX=3702 GN=AH...	[more]
O22812	3.9e-47	45.95	AT-hook motif nuclear-localized protein 10 OS=Arabidopsis thaliana OX=3702 GN=AH...	[more]
Q8GXB3	3.1e-44	45.35	AT-hook motif nuclear-localized protein 5 OS=Arabidopsis thaliana OX=3702 GN=AHL...	[more]
O80834	9.8e-43	45.57	AT-hook motif nuclear-localized protein 9 OS=Arabidopsis thaliana OX=3702 GN=AHL...	[more]

BLAST of CmoCh16G012030 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HJE2	8.0e-197	100.00	AT-hook motif nuclear-localized protein OS=Cucurbita maxima OX=3661 GN=LOC111465...	[more]
A0A6J1E6L1	8.0e-197	100.00	AT-hook motif nuclear-localized protein OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A5D3CHX0	5.6e-174	89.81	AT-hook motif nuclear-localized protein OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S3BL68	5.6e-174	89.81	AT-hook motif nuclear-localized protein OS=Cucumis melo OX=3656 GN=LOC103490790 ...	[more]
A0A0A0L1A5	1.2e-173	89.53	AT-hook motif nuclear-localized protein OS=Cucumis sativus OX=3659 GN=Csa_3G0117...	[more]

BLAST of CmoCh16G012030 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G46640.1	6.9e-60	44.63	AT hook motif DNA-binding family protein	[more]
AT4G17950.1	2.0e-59	42.86	AT hook motif DNA-binding family protein	[more]
AT2G33620.1	2.7e-48	45.95	AT hook motif DNA-binding family protein	[more]
AT2G33620.2	2.7e-48	45.95	AT hook motif DNA-binding family protein	[more]
AT2G33620.3	2.7e-48	45.95	AT hook motif DNA-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017956	AT hook, DNA-binding motif	SMART	SM00384	AT_hook_2	coord: 143..155 e-value: 15.0 score: 8.6 coord: 99..111 e-value: 0.21 score: 19.0
None	No IPR available	GENE3D	3.30.1330.80		coord: 169..293 e-value: 2.0E-24 score: 88.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 64..91
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 12..42
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 291..342
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..42
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 118..140
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 64..161
None	No IPR available	PANTHER	PTHR31500:SF76	AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 13-LIKE ISOFORM X1	coord: 81..355
None	No IPR available	SUPERFAMILY	117856	AF0104/ALDC/Ptd012-like	coord: 167..280
IPR005175	PPC domain	PFAM	PF03479	PCC	coord: 169..279 e-value: 1.3E-25 score: 89.9
IPR005175	PPC domain	PROSITE	PS51742	PPC	coord: 163..301 score: 32.663162
IPR005175	PPC domain	CDD	cd11378	DUF296	coord: 168..279 e-value: 1.75778E-31 score: 113.064
IPR039605	AT-hook motif nuclear-localized protein	PANTHER	PTHR31500	AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9	coord: 81..355

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh16G012030.1	CmoCh16G012030.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003680	minor groove of adenine-thymine-rich DNA binding
molecular_function	GO:0003677	DNA binding