CmoCh16G011360 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGACGGCTTCAGAGGATGAAAATTCCGTCCACAGGTAAATTCGCAGCCCGCAGATGGTTTTCTTTGTTGATTTAATGCTTTATTGTTTTCAATCTGAAATTTGTTCGTGATCGCAAACTATGACCTAATTTTCTGATGCATTTTGAAATGTGTCTCTGTATTCTTGTGATTCTTCTTGATCGTGCTCATATTGTTACGAATCTTGATTTCTCGCGTTCTTTCTAATACTATATCTTAATTGAAATTAGGGTTCTTCTTTCTGCATTTGTGAAATTTTTAAGAGATTTGATAGGTGGAAAAAGAGTGAAGTCATTGATCTTGACGCTTCAAGAAGTTGGTATTTGATTTAGATTATCATAGAGCCATCAATTTCTGGTAATTAGGTTCGATCAAATTTTGATGGCGTACGCCAAGCATTTTGAGTTTGTGCTTTATTTCAATTTGGTGCATGTAGTTTTGTAAGTTTCAATTTAGTTCATATAGTTTGGTTTCATTGCATTACCAGTCTCCCTTTACCTGGAAACGCGCCCGTCCCTCCGTATCTCATATCGTCAACCAACTTCTAGATATATCTTGTACTATAAAGATACTATGAGCGGTTTGTAATGACTTTTTAAGTGCTTAAAAATACTTTTTTGGCACTTAGAAGTGATTCCAATCTGATCTTAAATGTCAGCTCATTGCCTCGTTTTGCCACGTCAAAAGAAAACATACTTAGTAAATGTACCATCTCAAGCCCACCACTAGCCGTTATGGTTCTCTTTGGGCTTTCCCTTTCGGGCTTCTCCTCAAGGTTTTTAAAACGTGTCTGCTAGGGAGAGTTTCCACACCCTTATAAAGAATGTTTCGTTCTCCTCCCCAATCGATGTGGGATCCAACAATAAAAGAGTATACAAAAGTTGATATCGGGACAACAAACTTGAGAGACTTAACTAAAACCACTTTAGCTATGTAACGGCTCAATCCCATTGCTAGCAGATATTGTCCTCTTTGGGCTTTCCCTTCCGGGATTCCCCTCAAGGTTTTAAAACACGTCACCTAGGGAGAGGTTTCCACACCCTTATACATAATGCTTTGTTCTCCTTCCCAACCGACGTGGGATCTCACAATCCACCCCCTTTTGGGGCCTAGCGTCCTTGCTGGCACATCGCCTCATGTCCACCCCCATTCAGGGCTCAGCCTCCTCGCTGACACATTGTTCGGTGTTTGGCTCTGATACCATTTGTAACGACCCAAGCCCACTGTTAGCAAATATTGTCCTCGTTCTCTTTGGACTTTCTCTTTCGAGCTTCCCCTCAAGGTTTTTAAAATTTTAAAACAATGAGAACCAACTTGAAACAAAACGCAAACTATGGAGACTAAAGTGGAAATTAACCTAATAACTGTCGTAAAAGAAAGAAGTACGAGCACGAGATCGAAACATTTGTTTGTCACGACTCTAGTCAAACGTAAGACTAACAATGTCCACCAAAATCTTTTTTAGTTTTCCCTTCAGCTCTTACTGCTTTAAATGATTTGGTTTGCCTGTGCTATTCTGGTTTCCTTATTGCTCGTATTTTGTGGAGCCAGCAAAAGCTCTCTTGTCATGCTTGCTCCTGTGGAAGCAGTTCTTTTCGATGTAGATGGAACATTGTGTGATTCGGATCCGCTTCATTACTATGCCTTCCGTGAAATGCTTCAAGAGGTTAGATTCATTTTGTTTTGTTTAGAAGGAAAAGATCAACGTCCCAACATCCCAAATTAGTTGGAGAGGGGAACGAAGCATTCCTTGTAAACCGCTCCCTAGTAGATGCATTTTAAAACTGTGAGGCTGACGGTGATACGTAACGGGCTAAAGTAGACAATATCTGCTAGCGGCGGGCTTGGGCCGTTACAAATGGTATCAGAGCCAAACGGGCGGTGTGCTAGCGAGAACGCTAGACCCCAAGGGGGTGGATTGTGAGATCCCACATTGGTTGGAGTGTTTGGAGAGGGGAACAAAGCATTCATCATAAGGTTGTGGAAACCTCTCCCTAGTAGGCGCGTTTTAAAACTGTGAGGCTGACGGTGATGATATGTAACGGACTAAAGCTGACAATATCTGCTAGCGGTTATAAATGGTATCAGAGCCAGATACTGGGCGGTGTGTCAACGAGGACATTGGGCCCCTAAGGGGGGTTGGATTGTGAGATCCCACATTGGATAGAGAGGGGAACGAAACATGCCTTATAAGAGTGTGGAAACCTCTCTTTAGTAGACGCATTTTAAAAGCGTGAGGCTTATGGTGATACATAACGGGCTAAAACGGAAAATATCTTCTAGCGGTGGGCTTGGGATGTTACAGTATCTGCTGATATGATTTGCAGATTGGTTTCAATGGTGGGGTTCCTATTGACGAGGAGTTTTTCATTAAAAATGTTGCTGGCAAGCATAACGATGATGTTGCCCGAGCAATATTCCCAGATGATTTCGAACGAGGTTTGAAATTTTGCGACGAGAAGGAGGCTATGTTTCGAAGGTAAATCTTTCTCTTCATACCTTAGAATGTCTTTATAGGTCTGATTAGACAATATAATCAAATAACTTGATGCAACAGGTTGGTTACCGAACAATTAAAACCCGTGAACGGTTTGTATAAAGTGAAGAAATGGATAGAAGACCGCGGACTGAAACGTGCTGCAGTTACGAACGCCCCTCGACCGAATGCCGAGCTCATGATCTCCATGCTTGGTCTTACGGATTTCTTCGAGGCTGTTATTATAGGTGGTGAATGTGAGCATGCCAAACCACATCCAGAACCATATTTAAAGGCTCTGGAAGTACTCGAAGTGTCAAAGGATCACACTTTCATCTTTGAGGTCTGCCTTCTTTGGAAGAACAATTTTTCTTTTCCATGAACGTTCAGCGAGCACGTTTGGAATTTGACACATCTTGATTGCTTTGCATTGCTAGGATTCTGTATCGGGGATCAAAGCCGGAGTGGCAGCCGAGATGCCTGTCGTCGGTATAGCTACGAGAAATCCCGAGCACTTATTGATGCAAGCAAAGCCTGCCCTCGTCGTAAAGGACTACGATGATCCGAGATTGTGGGCAGCTTTGGACGGACTCGATAAGAGAGGTGGTTCCGTTAAGAACGCATGAATGATCGTCAATGGATGGTATTGATGAAATGGTTTCTCAATTCATTGGTACTCTCTATCTTGTTCTTAAATAACTTAGCTGTAGAGATAAAGTTGCTTTGGCTCTCAATGCCAATCCTAATACAATCAGTATACTACTTGTTGCCTTTCTTTCTTGTATTTATTGGCGGAAATTTTCTCTGAAAATTTATCGATATATGAAAATGACCAAAATACCCTCA ATGACGGCTTCAGAGGATGAAAATTCCGTCCACAGCAAAAGCTCTCTTGTCATGCTTGCTCCTGTGGAAGCAGTTCTTTTCGATGTAGATGGAACATTGTGTGATTCGGATCCGCTTCATTACTATGCCTTCCGTGAAATGCTTCAAGAGATTGGTTTCAATGGTGGGGTTCCTATTGACGAGGAGTTTTTCATTAAAAATGTTGCTGGCAAGCATAACGATGATGTTGCCCGAGCAATATTCCCAGATGATTTCGAACGAGGTTTGAAATTTTGCGACGAGAAGGAGGCTATGTTTCGAAGGTTGGTTACCGAACAATTAAAACCCGTGAACGGTTTGTATAAAGTGAAGAAATGGATAGAAGACCGCGGACTGAAACGTGCTGCAGTTACGAACGCCCCTCGACCGAATGCCGAGCTCATGATCTCCATGCTTGGTCTTACGGATTTCTTCGAGGCTGTTATTATAGGTGGTGAATGTGAGCATGCCAAACCACATCCAGAACCATATTTAAAGGCTCTGGAAGTACTCGAAGTGTCAAAGGATCACACTTTCATCTTTGAGGATTCTGTATCGGGGATCAAAGCCGGAGTGGCAGCCGAGATGCCTGTCGTCGGTATAGCTACGAGAAATCCCGAGCACTTATTGATGCAAGCAAAGCCTGCCCTCGTCGTAAAGGACTACGATGATCCGAGATTGTGGGCAGCTTTGGACGGACTCGATAAGAGAGGTGGTTCCGTTAAGAACGCATGAATGATCGTCAATGGATGGTATTGATGAAATGGTTTCTCAATTCATTGGTACTCTCTATCTTGTTCTTAAATAACTTAGCTGTAGAGATAAAGTTGCTTTGGCTCTCAATGCCAATCCTAATACAATCAGTATACTACTTGTTGCCTTTCTTTCTTGTATTTATTGGCGGAAATTTTCTCTGAAAATTTATCGATATATGAAAATGACCAAAATACCCTCA ATGACGGCTTCAGAGGATGAAAATTCCGTCCACAGCAAAAGCTCTCTTGTCATGCTTGCTCCTGTGGAAGCAGTTCTTTTCGATGTAGATGGAACATTGTGTGATTCGGATCCGCTTCATTACTATGCCTTCCGTGAAATGCTTCAAGAGATTGGTTTCAATGGTGGGGTTCCTATTGACGAGGAGTTTTTCATTAAAAATGTTGCTGGCAAGCATAACGATGATGTTGCCCGAGCAATATTCCCAGATGATTTCGAACGAGGTTTGAAATTTTGCGACGAGAAGGAGGCTATGTTTCGAAGGTTGGTTACCGAACAATTAAAACCCGTGAACGGTTTGTATAAAGTGAAGAAATGGATAGAAGACCGCGGACTGAAACGTGCTGCAGTTACGAACGCCCCTCGACCGAATGCCGAGCTCATGATCTCCATGCTTGGTCTTACGGATTTCTTCGAGGCTGTTATTATAGGTGGTGAATGTGAGCATGCCAAACCACATCCAGAACCATATTTAAAGGCTCTGGAAGTACTCGAAGTGTCAAAGGATCACACTTTCATCTTTGAGGATTCTGTATCGGGGATCAAAGCCGGAGTGGCAGCCGAGATGCCTGTCGTCGGTATAGCTACGAGAAATCCCGAGCACTTATTGATGCAAGCAAAGCCTGCCCTCGTCGTAAAGGACTACGATGATCCGAGATTGTGGGCAGCTTTGGACGGACTCGATAAGAGAGGTGGTTCCGTTAAGAACGCATGA MTASEDENSVHSKSSLVMLAPVEAVLFDVDGTLCDSDPLHYYAFREMLQEIGFNGGVPIDEEFFIKNVAGKHNDDVARAIFPDDFERGLKFCDEKEAMFRRLVTEQLKPVNGLYKVKKWIEDRGLKRAAVTNAPRPNAELMISMLGLTDFFEAVIIGGECEHAKPHPEPYLKALEVLEVSKDHTFIFEDSVSGIKAGVAAEMPVVGIATRNPEHLLMQAKPALVVKDYDDPRLWAALDGLDKRGGSVKNA Homology
BLAST of CmoCh16G011360 vs. ExPASy Swiss-Prot
Match: Q9ZVJ5 (Haloacid dehalogenase-like hydrolase domain-containing protein Sgpp OS=Arabidopsis thaliana OX=3702 GN=SGPP PE=1 SV=2) HSP 1 Score: 365.5 bits (937), Expect = 4.7e-100 Identity = 167/243 (68.72%), Postives = 203/243 (83.54%), Query Frame = 0
BLAST of CmoCh16G011360 vs. ExPASy Swiss-Prot
Match: Q9X0Y1 (Phosphorylated carbohydrates phosphatase TM_1254 OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=TM_1254 PE=1 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 1.3e-17 Identity = 58/211 (27.49%), Postives = 109/211 (51.66%), Query Frame = 0
BLAST of CmoCh16G011360 vs. ExPASy Swiss-Prot
Match: Q3J8A0 (Phosphoglycolate phosphatase OS=Nitrosococcus oceani (strain ATCC 19707 / BCRC 17464 / NCIMB 11848 / C-107) OX=323261 GN=Noc_2493 PE=3 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 1.3e-14 Identity = 53/194 (27.32%), Postives = 88/194 (45.36%), Query Frame = 0
BLAST of CmoCh16G011360 vs. ExPASy Swiss-Prot
Match: P44004 (Uncharacterized protein HI_0488 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=HI_0488 PE=3 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 1.8e-14 Identity = 48/190 (25.26%), Postives = 94/190 (49.47%), Query Frame = 0
BLAST of CmoCh16G011360 vs. ExPASy Swiss-Prot
Match: P77475 (Fructose-1-phosphate phosphatase YqaB OS=Escherichia coli (strain K12) OX=83333 GN=yqaB PE=1 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 1.9e-13 Identity = 54/186 (29.03%), Postives = 95/186 (51.08%), Query Frame = 0
BLAST of CmoCh16G011360 vs. ExPASy TrEMBL
Match: A0A6J1EBR7 (haloacid dehalogenase-like hydrolase domain-containing protein Sgpp isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111431121 PE=4 SV=1) HSP 1 Score: 512.3 bits (1318), Expect = 1.1e-141 Identity = 250/250 (100.00%), Postives = 250/250 (100.00%), Query Frame = 0
BLAST of CmoCh16G011360 vs. ExPASy TrEMBL
Match: A0A6J1HMY1 (haloacid dehalogenase-like hydrolase domain-containing protein Sgpp isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111465097 PE=4 SV=1) HSP 1 Score: 492.3 bits (1266), Expect = 1.2e-135 Identity = 239/250 (95.60%), Postives = 245/250 (98.00%), Query Frame = 0
BLAST of CmoCh16G011360 vs. ExPASy TrEMBL
Match: A0A6J1E6R7 (haloacid dehalogenase-like hydrolase domain-containing protein Sgpp isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111431121 PE=4 SV=1) HSP 1 Score: 481.9 bits (1239), Expect = 1.6e-132 Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 0
BLAST of CmoCh16G011360 vs. ExPASy TrEMBL
Match: A0A1S3BL19 (haloacid dehalogenase-like hydrolase domain-containing protein Sgpp OS=Cucumis melo OX=3656 GN=LOC103490819 PE=4 SV=1) HSP 1 Score: 476.5 bits (1225), Expect = 6.9e-131 Identity = 230/250 (92.00%), Postives = 241/250 (96.40%), Query Frame = 0
BLAST of CmoCh16G011360 vs. ExPASy TrEMBL
Match: A0A6J1FED3 (haloacid dehalogenase-like hydrolase domain-containing protein Sgpp OS=Cucurbita moschata OX=3662 GN=LOC111443283 PE=4 SV=1) HSP 1 Score: 474.6 bits (1220), Expect = 2.6e-130 Identity = 226/250 (90.40%), Postives = 239/250 (95.60%), Query Frame = 0
BLAST of CmoCh16G011360 vs. TAIR 10
Match: AT2G38740.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein ) HSP 1 Score: 365.5 bits (937), Expect = 3.3e-101 Identity = 167/243 (68.72%), Postives = 203/243 (83.54%), Query Frame = 0
BLAST of CmoCh16G011360 vs. TAIR 10
Match: AT1G56500.1 (haloacid dehalogenase-like hydrolase family protein ) HSP 1 Score: 85.5 bits (210), Expect = 6.6e-17 Identity = 60/216 (27.78%), Postives = 102/216 (47.22%), Query Frame = 0
BLAST of CmoCh16G011360 vs. TAIR 10
Match: AT4G21470.1 (riboflavin kinase/FMN hydrolase ) HSP 1 Score: 63.5 bits (153), Expect = 2.7e-10 Identity = 53/189 (28.04%), Postives = 90/189 (47.62%), Query Frame = 0
BLAST of CmoCh16G011360 vs. TAIR 10
Match: AT4G39970.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein ) HSP 1 Score: 58.2 bits (139), Expect = 1.1e-08 Identity = 59/232 (25.43%), Postives = 98/232 (42.24%), Query Frame = 0
BLAST of CmoCh16G011360 vs. TAIR 10
Match: AT2G41250.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein ) HSP 1 Score: 45.8 bits (107), Expect = 5.8e-05 Identity = 26/68 (38.24%), Postives = 40/68 (58.82%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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