CmoCh16G010690 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh16G010690
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionF-box protein At4g35733-like
LocationCmo_Chr16: 7511839 .. 7512795 (-)
RNA-Seq ExpressionCmoCh16G010690
SyntenyCmoCh16G010690
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAATTCAAAATCTCGAGATTGGACAACACTTGACTACGATGTTCTTGGTGTGATTCTCAACAAAATGGTGTCTCTCTACGATTATTTCCAATTCAGCTTGGTATGTAAGTCTTGGTATTTTCATGCATTACGCCACAAACACCAACGATCCATAATTGCCTCCAAGGTTCCTCAACTGGCGATGCTCATTGTTCCCTTAGAGGATGGTTTTGAAAAGCAGCATTGCTTATACGATCTCACTAGGAACATAGTTCGCTCGGTTGACTTCAAATTTTGCTTCAACAAAAGGTGTCGTGGTTCCTCTTTCGGTTGGTTGATCATGCGTGATGAGACACTCGGTATCGTTTTATTCAACCCTTTTTCTGGGACTGTGATTTATCTTCCTCCGGTTGCTACATATGATGACATTGAGTGGATTCCAGGCCACATAATTAAAGCAATACTAACCAAAGATCCATCGTTATATCCAAACGATTACATGGTTGTAGGTATCTTTGGTACATACAAAAGATTGTGTCTGATAAGAGCAAATGATAAAACTTGGACGTATTACTACCCAACACCAAACATTCCTTTTAATGATATTAATATTTGTGGTGATACTTTATATGCTACAGAATACTACTTGAATGTTTGGAAAGTTGAAGTTGAAAATAGTGAGGATGAAAGTTCATCTATTTGTATATCTGTAAAGATGGTCCACACAATAGAAATGGGGCACATGGTTACGTCGTATATTACAGAGTCTTCCAAAGGAGAGCTTTTGGTTGTTTTGAGGATATTAGACTCTGGAGAAGAACAGTTCGAGACAGTGGACTTTGAAGTTTACAAACTTATCCATGAGAATGAAGATGAGATGCGAAGGGCGGTAGAGATAAAGAGCTTAGATGGTGATGCTATTTTTATTGGCGACTCCCAGTCCATTTGTGTTTCAACTAAAGAATTTCCTTGA

mRNA sequence

ATGGAAAATTCAAAATCTCGAGATTGGACAACACTTGACTACGATGTTCTTGGTGTGATTCTCAACAAAATGGTGTCTCTCTACGATTATTTCCAATTCAGCTTGGTATGTAAGTCTTGGTATTTTCATGCATTACGCCACAAACACCAACGATCCATAATTGCCTCCAAGGTTCCTCAACTGGCGATGCTCATTGTTCCCTTAGAGGATGGTTTTGAAAAGCAGCATTGCTTATACGATCTCACTAGGAACATAGTTCGCTCGGTTGACTTCAAATTTTGCTTCAACAAAAGGTGTCGTGGTTCCTCTTTCGGTTGGTTGATCATGCGTGATGAGACACTCGGTATCGTTTTATTCAACCCTTTTTCTGGGACTGTGATTTATCTTCCTCCGGTTGCTACATATGATGACATTGAGTGGATTCCAGGCCACATAATTAAAGCAATACTAACCAAAGATCCATCGTTATATCCAAACGATTACATGGTTGTAGGTATCTTTGGTACATACAAAAGATTGTGTCTGATAAGAGCAAATGATAAAACTTGGACGTATTACTACCCAACACCAAACATTCCTTTTAATGATATTAATATTTGTGGTGATACTTTATATGCTACAGAATACTACTTGAATGTTTGGAAAGTTGAAGTTGAAAATAGTGAGGATGAAAGTTCATCTATTTGTATATCTGTAAAGATGGTCCACACAATAGAAATGGGGCACATGGTTACGTCGTATATTACAGAGTCTTCCAAAGGAGAGCTTTTGGTTGTTTTGAGGATATTAGACTCTGGAGAAGAACAGTTCGAGACAGTGGACTTTGAAGTTTACAAACTTATCCATGAGAATGAAGATGAGATGCGAAGGGCGGTAGAGATAAAGAGCTTAGATGGTGATGCTATTTTTATTGGCGACTCCCAGTCCATTTGTGTTTCAACTAAAGAATTTCCTTGA

Coding sequence (CDS)

ATGGAAAATTCAAAATCTCGAGATTGGACAACACTTGACTACGATGTTCTTGGTGTGATTCTCAACAAAATGGTGTCTCTCTACGATTATTTCCAATTCAGCTTGGTATGTAAGTCTTGGTATTTTCATGCATTACGCCACAAACACCAACGATCCATAATTGCCTCCAAGGTTCCTCAACTGGCGATGCTCATTGTTCCCTTAGAGGATGGTTTTGAAAAGCAGCATTGCTTATACGATCTCACTAGGAACATAGTTCGCTCGGTTGACTTCAAATTTTGCTTCAACAAAAGGTGTCGTGGTTCCTCTTTCGGTTGGTTGATCATGCGTGATGAGACACTCGGTATCGTTTTATTCAACCCTTTTTCTGGGACTGTGATTTATCTTCCTCCGGTTGCTACATATGATGACATTGAGTGGATTCCAGGCCACATAATTAAAGCAATACTAACCAAAGATCCATCGTTATATCCAAACGATTACATGGTTGTAGGTATCTTTGGTACATACAAAAGATTGTGTCTGATAAGAGCAAATGATAAAACTTGGACGTATTACTACCCAACACCAAACATTCCTTTTAATGATATTAATATTTGTGGTGATACTTTATATGCTACAGAATACTACTTGAATGTTTGGAAAGTTGAAGTTGAAAATAGTGAGGATGAAAGTTCATCTATTTGTATATCTGTAAAGATGGTCCACACAATAGAAATGGGGCACATGGTTACGTCGTATATTACAGAGTCTTCCAAAGGAGAGCTTTTGGTTGTTTTGAGGATATTAGACTCTGGAGAAGAACAGTTCGAGACAGTGGACTTTGAAGTTTACAAACTTATCCATGAGAATGAAGATGAGATGCGAAGGGCGGTAGAGATAAAGAGCTTAGATGGTGATGCTATTTTTATTGGCGACTCCCAGTCCATTTGTGTTTCAACTAAAGAATTTCCTTGA

Protein sequence

MENSKSRDWTTLDYDVLGVILNKMVSLYDYFQFSLVCKSWYFHALRHKHQRSIIASKVPQLAMLIVPLEDGFEKQHCLYDLTRNIVRSVDFKFCFNKRCRGSSFGWLIMRDETLGIVLFNPFSGTVIYLPPVATYDDIEWIPGHIIKAILTKDPSLYPNDYMVVGIFGTYKRLCLIRANDKTWTYYYPTPNIPFNDINICGDTLYATEYYLNVWKVEVENSEDESSSICISVKMVHTIEMGHMVTSYITESSKGELLVVLRILDSGEEQFETVDFEVYKLIHENEDEMRRAVEIKSLDGDAIFIGDSQSICVSTKEFP
Homology
BLAST of CmoCh16G010690 vs. ExPASy Swiss-Prot
Match: Q9FLP7 (Putative F-box protein At5g55150 OS=Arabidopsis thaliana OX=3702 GN=At5g55150 PE=4 SV=2)

HSP 1 Score: 67.0 bits (162), Expect = 4.4e-10
Identity = 55/226 (24.34%), Postives = 101/226 (44.69%), Query Frame = 0

Query: 101 GSSFGWLIMRDETLGIVLFNPFSGTVIYLPPVATYDDI-------------EWIPGHIIK 160
           G+   W+     TLG +L  P + +V  LPP+ +++D+             E +   I K
Sbjct: 85  GNQQAWVC--GSTLGFLLTKPVTKSVTSLPPLISFEDVQRLLQSQAIIPDSEALKNFIKK 144

Query: 161 AILTKDPSLYPNDYMVVGIFGTYKRLCLIRANDKTWTYYYPTPNIPFNDINICGDTLYAT 220
           A+     SL  ++++V+ I+ T ++L   R  DK WT      +   +DI  C    +A 
Sbjct: 145 AV--SSTSLLDDEWVVLVIYNTDRKLAFCRRGDKQWTDLESVAS-SVDDIVFCNGVFFAI 204

Query: 221 EYYLNVWKVEVENSEDESSSICISVKMVHTIEMGHMVTSYITESSKGELLVVLRILDSGE 280
           +    ++  E+  +  +++ +C +    +          Y+ ES   EL VVL+ L+  +
Sbjct: 205 DRLGEIYHCELSANNPKATPLCSTSPFRY-----DSCKKYLAESDYDELWVVLKKLELND 264

Query: 281 EQFETVDFEVYKLIHENEDEMRRAVEIKSLDGDAIFIGDSQSICVS 314
           +     DFE    I+E   E     ++ SL G A+F+   Q  C++
Sbjct: 265 D----CDFETSFEIYEFNRETNEWTKVMSLRGKALFL-SPQGRCIA 295

BLAST of CmoCh16G010690 vs. ExPASy TrEMBL
Match: A0A6J1E5W8 (uncharacterized protein LOC111431008 OS=Cucurbita moschata OX=3662 GN=LOC111431008 PE=4 SV=1)

HSP 1 Score: 660.6 bits (1703), Expect = 3.3e-186
Identity = 318/318 (100.00%), Postives = 318/318 (100.00%), Query Frame = 0

Query: 1   MENSKSRDWTTLDYDVLGVILNKMVSLYDYFQFSLVCKSWYFHALRHKHQRSIIASKVPQ 60
           MENSKSRDWTTLDYDVLGVILNKMVSLYDYFQFSLVCKSWYFHALRHKHQRSIIASKVPQ
Sbjct: 1   MENSKSRDWTTLDYDVLGVILNKMVSLYDYFQFSLVCKSWYFHALRHKHQRSIIASKVPQ 60

Query: 61  LAMLIVPLEDGFEKQHCLYDLTRNIVRSVDFKFCFNKRCRGSSFGWLIMRDETLGIVLFN 120
           LAMLIVPLEDGFEKQHCLYDLTRNIVRSVDFKFCFNKRCRGSSFGWLIMRDETLGIVLFN
Sbjct: 61  LAMLIVPLEDGFEKQHCLYDLTRNIVRSVDFKFCFNKRCRGSSFGWLIMRDETLGIVLFN 120

Query: 121 PFSGTVIYLPPVATYDDIEWIPGHIIKAILTKDPSLYPNDYMVVGIFGTYKRLCLIRAND 180
           PFSGTVIYLPPVATYDDIEWIPGHIIKAILTKDPSLYPNDYMVVGIFGTYKRLCLIRAND
Sbjct: 121 PFSGTVIYLPPVATYDDIEWIPGHIIKAILTKDPSLYPNDYMVVGIFGTYKRLCLIRAND 180

Query: 181 KTWTYYYPTPNIPFNDINICGDTLYATEYYLNVWKVEVENSEDESSSICISVKMVHTIEM 240
           KTWTYYYPTPNIPFNDINICGDTLYATEYYLNVWKVEVENSEDESSSICISVKMVHTIEM
Sbjct: 181 KTWTYYYPTPNIPFNDINICGDTLYATEYYLNVWKVEVENSEDESSSICISVKMVHTIEM 240

Query: 241 GHMVTSYITESSKGELLVVLRILDSGEEQFETVDFEVYKLIHENEDEMRRAVEIKSLDGD 300
           GHMVTSYITESSKGELLVVLRILDSGEEQFETVDFEVYKLIHENEDEMRRAVEIKSLDGD
Sbjct: 241 GHMVTSYITESSKGELLVVLRILDSGEEQFETVDFEVYKLIHENEDEMRRAVEIKSLDGD 300

Query: 301 AIFIGDSQSICVSTKEFP 319
           AIFIGDSQSICVSTKEFP
Sbjct: 301 AIFIGDSQSICVSTKEFP 318

BLAST of CmoCh16G010690 vs. ExPASy TrEMBL
Match: A0A6J1E923 (probable F-box protein At4g22165 OS=Cucurbita moschata OX=3662 GN=LOC111431007 PE=4 SV=1)

HSP 1 Score: 625.9 bits (1613), Expect = 9.0e-176
Identity = 300/318 (94.34%), Postives = 306/318 (96.23%), Query Frame = 0

Query: 1   MENSKSRDWTTLDYDVLGVILNKMVSLYDYFQFSLVCKSWYFHALRHKHQRSIIASKVPQ 60
           MENS SRDWT LDYDVLGVILNKMVSLYDY QF+LVCKSWYF ALRHKH+RSII SKV Q
Sbjct: 1   MENSNSRDWTALDYDVLGVILNKMVSLYDYLQFNLVCKSWYFLALRHKHERSIITSKVTQ 60

Query: 61  LAMLIVPLEDGFEKQHCLYDLTRNIVRSVDFKFCFNKRCRGSSFGWLIMRDETLGIVLFN 120
           L MLIVP +DG EKQHCLYDLTRN+VR VDFKFCFNKRC GSSFGWLIMRDETLGIVLFN
Sbjct: 61  LPMLIVPSKDGLEKQHCLYDLTRNVVRPVDFKFCFNKRCCGSSFGWLIMRDETLGIVLFN 120

Query: 121 PFSGTVIYLPPVATYDDIEWIPGHIIKAILTKDPSLYPNDYMVVGIFGTYKRLCLIRAND 180
           PFSGTVIYLPPVATYDDIEWIPGHIIKAILTKDPSLYPNDYMVV IFGTYKRLCLIRAND
Sbjct: 121 PFSGTVIYLPPVATYDDIEWIPGHIIKAILTKDPSLYPNDYMVVAIFGTYKRLCLIRAND 180

Query: 181 KTWTYYYPTPNIPFNDINICGDTLYATEYYLNVWKVEVENSEDESSSICISVKMVHTIEM 240
           KTWTYYYPTPNIPFNDINICGDTLYATEYYLNVWKVEVENSEDESSSICISVKMVHTIEM
Sbjct: 181 KTWTYYYPTPNIPFNDINICGDTLYATEYYLNVWKVEVENSEDESSSICISVKMVHTIEM 240

Query: 241 GHMVTSYITESSKGELLVVLRILDSGEEQFETVDFEVYKLIHENEDEMRRAVEIKSLDGD 300
           GH+VTSYITESSKGELLVVLRILDSGEEQFETVDFEVYKLIHENEDEMRRAVE+KSLDGD
Sbjct: 241 GHLVTSYITESSKGELLVVLRILDSGEEQFETVDFEVYKLIHENEDEMRRAVEVKSLDGD 300

Query: 301 AIFIGDSQSICVSTKEFP 319
           AIFIGDSQSICVSTKEFP
Sbjct: 301 AIFIGDSQSICVSTKEFP 318

BLAST of CmoCh16G010690 vs. ExPASy TrEMBL
Match: A0A6J1E5P5 (probable F-box protein At1g65740 OS=Cucurbita moschata OX=3662 GN=LOC111431012 PE=4 SV=1)

HSP 1 Score: 591.7 bits (1524), Expect = 1.9e-165
Identity = 287/317 (90.54%), Postives = 298/317 (94.01%), Query Frame = 0

Query: 1   MENSKSRDWTTLDYDVLGVILNKMVSLYDYFQFSLVCKSWYFHALRHKHQRSIIASKVPQ 60
           MENSKSRDWT LDYDVLGVILNKMVSLYDY QFSLVCKSWYF AL HKHQRSIIASKVPQ
Sbjct: 1   MENSKSRDWTALDYDVLGVILNKMVSLYDYLQFSLVCKSWYFLALHHKHQRSIIASKVPQ 60

Query: 61  LAMLIVPLEDGFEKQHCLYDLTRNIVRSVDFKFCFNKRCRGSSFGWLIMRDETLGIVLFN 120
           L MLIVP +DG EKQHCLYDLT NIVRSVDFKFCFNKRC GSSFGWLIMRDETLGIVLFN
Sbjct: 61  LPMLIVPSKDGLEKQHCLYDLTTNIVRSVDFKFCFNKRCCGSSFGWLIMRDETLGIVLFN 120

Query: 121 PFSGTVIYLPPVATYDDIEWIPGHIIKAILTKDPSLYPNDYMVVGIFGTYKRLCLIRAND 180
           PFSG VIYLPPVATYDDIEWIPGHIIKAILTKDPSLYPNDYMVVGIFGTYKRLCLIRAND
Sbjct: 121 PFSGAVIYLPPVATYDDIEWIPGHIIKAILTKDPSLYPNDYMVVGIFGTYKRLCLIRAND 180

Query: 181 KTWTYYYPTPNIPFNDINICGDTLYATEYYLNVWKVEVENSEDESSSICISVKMVHTIEM 240
           KTWTYYYPTPNIPFNDINIC DT+YATE  L+VWKVEV+NSEDESSSI ISVKMVHT  +
Sbjct: 181 KTWTYYYPTPNIPFNDINICRDTIYATENDLDVWKVEVQNSEDESSSISISVKMVHTKRI 240

Query: 241 GHMVTSYITESSKGELLVVLRILDSGEEQFETVDFEVYKLIHENEDEMRRAVEIKSLDGD 300
            ++ T+YITESSKGELLVVLRI +SGEEQFETVDFEVYKLIHENEDE+RRAVE+KSLDGD
Sbjct: 241 RYIGTAYITESSKGELLVVLRIFNSGEEQFETVDFEVYKLIHENEDELRRAVEVKSLDGD 300

Query: 301 AIFIGDSQSICVSTKEF 318
           AIFIGDSQSICVSTKEF
Sbjct: 301 AIFIGDSQSICVSTKEF 317

BLAST of CmoCh16G010690 vs. ExPASy TrEMBL
Match: A0A6J1EBA6 (F-box protein At4g35733-like OS=Cucurbita moschata OX=3662 GN=LOC111431009 PE=4 SV=1)

HSP 1 Score: 498.8 bits (1283), Expect = 1.7e-137
Identity = 242/255 (94.90%), Postives = 245/255 (96.08%), Query Frame = 0

Query: 63  MLIVPLEDGFEKQHCLYDLTRNIVRSVDFKFCFNKRCRGSSFGWLIMRDETLGIVLFNPF 122
           MLIVP +DG EKQHCLYDLT NIVRSVDFKF FNKRC GSSFGWLIMRDETLGIVLFNPF
Sbjct: 1   MLIVPSKDGPEKQHCLYDLTTNIVRSVDFKFYFNKRCCGSSFGWLIMRDETLGIVLFNPF 60

Query: 123 SGTVIYLPPVATYDDIEWIPGHIIKAILTKDPSLYPNDYMVVGIFGTYKRLCLIRANDKT 182
           SG VIYLPPVATYDDIEWIPGHIIKAILTKDPSLYPNDYMVV IFGTYKRL LIRANDKT
Sbjct: 61  SGAVIYLPPVATYDDIEWIPGHIIKAILTKDPSLYPNDYMVVSIFGTYKRLYLIRANDKT 120

Query: 183 WTYYYPTPNIPFNDINICGDTLYATEYYLNVWKVEVENSEDESSSICISVKMVHTIEMGH 242
           WTYYYPTPNIPFNDINICGDTLYATEYYLNVWKVEVENSEDESSSICISVKMVHTIEMGH
Sbjct: 121 WTYYYPTPNIPFNDINICGDTLYATEYYLNVWKVEVENSEDESSSICISVKMVHTIEMGH 180

Query: 243 MVTSYITESSKGELLVVLRILDSGEEQFETVDFEVYKLIHENEDEMRRAVEIKSLDGDAI 302
           MVTSYITESSKGELL+VLRILDSGEEQFETV FEVYKLIHENEDEMRRAVE+KSLDG AI
Sbjct: 181 MVTSYITESSKGELLIVLRILDSGEEQFETVGFEVYKLIHENEDEMRRAVEVKSLDGGAI 240

Query: 303 FIGDSQSICVSTKEF 318
           FIGDSQSICVSTKEF
Sbjct: 241 FIGDSQSICVSTKEF 255

BLAST of CmoCh16G010690 vs. ExPASy TrEMBL
Match: A0A6J1E6C7 (probable F-box protein At1g65740 OS=Cucurbita moschata OX=3662 GN=LOC111431011 PE=4 SV=1)

HSP 1 Score: 471.9 bits (1213), Expect = 2.2e-129
Identity = 229/318 (72.01%), Postives = 258/318 (81.13%), Query Frame = 0

Query: 1   MENSKSRDWTTLDYDVLGVILNKMVSLYDYFQFSLVCKSWYFHALRHKHQRSIIASKVPQ 60
           MENSK RDWT LDYDVLGVILNKMVSLYDY QFS+VCKSWYF ALRHKHQRSII SK PQ
Sbjct: 1   MENSKFRDWTALDYDVLGVILNKMVSLYDYLQFSIVCKSWYFVALRHKHQRSIITSKFPQ 60

Query: 61  LAMLIVPLEDGFEKQHCLYDLTRNIVRSVDFKFCFNKRCRGSSFGWLIMRDETLGIVLFN 120
           L MLIVP ++G EKQHCLYD  +N  R VDFKFCFNKRC GSSFGWLIM +ETL + LFN
Sbjct: 61  LPMLIVPSKNGLEKQHCLYDPRKNRTRPVDFKFCFNKRCCGSSFGWLIMCEETLNLTLFN 120

Query: 121 PFSGTVIYLPPVATYDDIEWIPGHIIKAILTKDPSLYPNDYMVVGIFGTYKRLCLIRAND 180
           PFSGTVI LP +   D+ ++ P  I+KAILTKDPSLYPNDYMVV I+ +Y RLCL+RAND
Sbjct: 121 PFSGTVICLPSIFIDDEPDYAPDRIVKAILTKDPSLYPNDYMVVAIYSSYSRLCLMRAND 180

Query: 181 KTWTYYYPTPNIPFNDINICGDTLYATEYYLNVWKVEVENSEDESSSICISVKMVHTIEM 240
           K+WTY YP PNIPF DIN+  DTLYATE  + VWKVEV+N +DESSSI IS+KMVH    
Sbjct: 181 KSWTYSYPEPNIPFKDINVSSDTLYATENNMMVWKVEVKNRDDESSSISISLKMVHAKRT 240

Query: 241 GHMVTSYITESSKGELLVVLRILDSGEEQFETVDFEVYKLIHENEDEMRRAVEIKSLDGD 300
              V SYITESSKGELL+VLR +   + Q ET  F+VYKLI E E++M RAV++KSLDGD
Sbjct: 241 NDFVVSYITESSKGELLLVLRSISEEDSQLETTKFKVYKLIDECENDMLRAVKLKSLDGD 300

Query: 301 AIFIGDSQSICVSTKEFP 319
           A+FIGDSQSICVSTK FP
Sbjct: 301 AMFIGDSQSICVSTKYFP 318

BLAST of CmoCh16G010690 vs. TAIR 10
Match: AT5G55150.1 (Protein of unknown function (DUF295) )

HSP 1 Score: 67.0 bits (162), Expect = 3.1e-11
Identity = 55/226 (24.34%), Postives = 101/226 (44.69%), Query Frame = 0

Query: 101 GSSFGWLIMRDETLGIVLFNPFSGTVIYLPPVATYDDI-------------EWIPGHIIK 160
           G+   W+     TLG +L  P + +V  LPP+ +++D+             E +   I K
Sbjct: 85  GNQQAWVC--GSTLGFLLTKPVTKSVTSLPPLISFEDVQRLLQSQAIIPDSEALKNFIKK 144

Query: 161 AILTKDPSLYPNDYMVVGIFGTYKRLCLIRANDKTWTYYYPTPNIPFNDINICGDTLYAT 220
           A+     SL  ++++V+ I+ T ++L   R  DK WT      +   +DI  C    +A 
Sbjct: 145 AV--SSTSLLDDEWVVLVIYNTDRKLAFCRRGDKQWTDLESVAS-SVDDIVFCNGVFFAI 204

Query: 221 EYYLNVWKVEVENSEDESSSICISVKMVHTIEMGHMVTSYITESSKGELLVVLRILDSGE 280
           +    ++  E+  +  +++ +C +    +          Y+ ES   EL VVL+ L+  +
Sbjct: 205 DRLGEIYHCELSANNPKATPLCSTSPFRY-----DSCKKYLAESDYDELWVVLKKLELND 264

Query: 281 EQFETVDFEVYKLIHENEDEMRRAVEIKSLDGDAIFIGDSQSICVS 314
           +     DFE    I+E   E     ++ SL G A+F+   Q  C++
Sbjct: 265 D----CDFETSFEIYEFNRETNEWTKVMSLRGKALFL-SPQGRCIA 295

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9FLP74.4e-1024.34Putative F-box protein At5g55150 OS=Arabidopsis thaliana OX=3702 GN=At5g55150 PE... [more]
Match NameE-valueIdentityDescription
A0A6J1E5W83.3e-186100.00uncharacterized protein LOC111431008 OS=Cucurbita moschata OX=3662 GN=LOC1114310... [more]
A0A6J1E9239.0e-17694.34probable F-box protein At4g22165 OS=Cucurbita moschata OX=3662 GN=LOC111431007 P... [more]
A0A6J1E5P51.9e-16590.54probable F-box protein At1g65740 OS=Cucurbita moschata OX=3662 GN=LOC111431012 P... [more]
A0A6J1EBA61.7e-13794.90F-box protein At4g35733-like OS=Cucurbita moschata OX=3662 GN=LOC111431009 PE=4 ... [more]
A0A6J1E6C72.2e-12972.01probable F-box protein At1g65740 OS=Cucurbita moschata OX=3662 GN=LOC111431011 P... [more]
Match NameE-valueIdentityDescription
AT5G55150.13.1e-1124.34Protein of unknown function (DUF295) [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005174Domain unknown function DUF295PFAMPF03478DUF295coord: 292..318
e-value: 7.7E-5
score: 22.3
NoneNo IPR availablePANTHERPTHR44259OS07G0183000 PROTEIN-RELATEDcoord: 5..318
NoneNo IPR availablePANTHERPTHR44259:SF18UBIQUITIN-PROTEIN LIGASEcoord: 5..318

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh16G010690.1CmoCh16G010690.1mRNA