CmoCh16G009210 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCGGAAACAACCAAATCCCCCAATCGGAGTCGGGATTCGAAGACTGGCTGCCGGAGATGGCGTGCAAGCTCGGGGGAGAGGGGCTGATCGGAGAACTCTGCAACGGATTCAATCTGCTGATGGACCCTGAGAAGGGAGTGATCAATTTGGAGAGCTTGAAGAGGAATGCGGCGGCGCTAGGGCTGGGAGATCAGTCCGACGAGGAGCTGAGAGGCATGTTGAGAGAAGGGGATTTCGACGGCGACGGCGCTCTCAATCAGATGGAATTTTGTGTTCTTATGTTCAGATTAAGTCCGGAGTTGATGGACGCCTCCCGCTACTGCTTCCAACAAAGTCTCCGTCCAGACTTTCCCAATTTTAATTGA ATGGCCGGAAACAACCAAATCCCCCAATCGGAGTCGGGATTCGAAGACTGGCTGCCGGAGATGGCGTGCAAGCTCGGGGGAGAGGGGCTGATCGGAGAACTCTGCAACGGATTCAATCTGCTGATGGACCCTGAGAAGGGAGTGATCAATTTGGAGAGCTTGAAGAGGAATGCGGCGGCGCTAGGGCTGGGAGATCAGTCCGACGAGGAGCTGAGAGGCATGTTGAGAGAAGGGGATTTCGACGGCGACGGCGCTCTCAATCAGATGGAATTTTGTGTTCTTATGTTCAGATTAAGTCCGGAGTTGATGGACGCCTCCCGCTACTGCTTCCAACAAAGTCTCCGTCCAGACTTTCCCAATTTTAATTGA ATGGCCGGAAACAACCAAATCCCCCAATCGGAGTCGGGATTCGAAGACTGGCTGCCGGAGATGGCGTGCAAGCTCGGGGGAGAGGGGCTGATCGGAGAACTCTGCAACGGATTCAATCTGCTGATGGACCCTGAGAAGGGAGTGATCAATTTGGAGAGCTTGAAGAGGAATGCGGCGGCGCTAGGGCTGGGAGATCAGTCCGACGAGGAGCTGAGAGGCATGTTGAGAGAAGGGGATTTCGACGGCGACGGCGCTCTCAATCAGATGGAATTTTGTGTTCTTATGTTCAGATTAAGTCCGGAGTTGATGGACGCCTCCCGCTACTGCTTCCAACAAAGTCTCCGTCCAGACTTTCCCAATTTTAATTGA MAGNNQIPQSESGFEDWLPEMACKLGGEGLIGELCNGFNLLMDPEKGVINLESLKRNAAALGLGDQSDEELRGMLREGDFDGDGALNQMEFCVLMFRLSPELMDASRYCFQQSLRPDFPNFN Homology
BLAST of CmoCh16G009210 vs. ExPASy Swiss-Prot
Match: O81831 (Calcium-binding protein KRP1 OS=Arabidopsis thaliana OX=3702 GN=KRP1 PE=2 SV=1) HSP 1 Score: 150.6 bits (379), Expect = 1.2e-35 Identity = 75/109 (68.81%), Postives = 88/109 (80.73%), Query Frame = 0
BLAST of CmoCh16G009210 vs. ExPASy Swiss-Prot
Match: Q9LSQ6 (Calcium-binding protein PBP1 OS=Arabidopsis thaliana OX=3702 GN=PBP1 PE=1 SV=1) HSP 1 Score: 144.1 bits (362), Expect = 1.1e-33 Identity = 73/115 (63.48%), Postives = 88/115 (76.52%), Query Frame = 0
BLAST of CmoCh16G009210 vs. ExPASy Swiss-Prot
Match: Q9ZPX9 (Calcium-binding protein KIC OS=Arabidopsis thaliana OX=3702 GN=KIC PE=1 SV=2) HSP 1 Score: 120.9 bits (302), Expect = 9.8e-27 Identity = 58/112 (51.79%), Postives = 78/112 (69.64%), Query Frame = 0
BLAST of CmoCh16G009210 vs. ExPASy Swiss-Prot
Match: Q06827 (Caltractin OS=Scherffelia dubia OX=3190 PE=1 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 1.2e-08 Identity = 35/86 (40.70%), Postives = 50/86 (58.14%), Query Frame = 0
BLAST of CmoCh16G009210 vs. ExPASy Swiss-Prot
Match: P43646 (Caltractin (Fragment) OS=Tetraselmis striata OX=3165 PE=2 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 1.2e-08 Identity = 35/86 (40.70%), Postives = 50/86 (58.14%), Query Frame = 0
BLAST of CmoCh16G009210 vs. ExPASy TrEMBL
Match: A0A6J1F0V4 (calcium-binding protein PBP1-like OS=Cucurbita moschata OX=3662 GN=LOC111438477 PE=4 SV=1) HSP 1 Score: 256.9 bits (655), Expect = 4.2e-65 Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0
BLAST of CmoCh16G009210 vs. ExPASy TrEMBL
Match: A0A6J1JCW0 (calcium-binding protein PBP1-like OS=Cucurbita maxima OX=3661 GN=LOC111483323 PE=4 SV=1) HSP 1 Score: 248.1 bits (632), Expect = 2.0e-62 Identity = 118/122 (96.72%), Postives = 120/122 (98.36%), Query Frame = 0
BLAST of CmoCh16G009210 vs. ExPASy TrEMBL
Match: A0A0A0L2H0 (EF-hand domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G081900 PE=4 SV=1) HSP 1 Score: 211.8 bits (538), Expect = 1.6e-51 Identity = 102/118 (86.44%), Postives = 107/118 (90.68%), Query Frame = 0
BLAST of CmoCh16G009210 vs. ExPASy TrEMBL
Match: A0A5A7SII1 (Calcium-binding protein PBP1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold68G00340 PE=4 SV=1) HSP 1 Score: 210.7 bits (535), Expect = 3.5e-51 Identity = 101/118 (85.59%), Postives = 107/118 (90.68%), Query Frame = 0
BLAST of CmoCh16G009210 vs. ExPASy TrEMBL
Match: A0A1S3CKV7 (calcium-binding protein PBP1-like OS=Cucumis melo OX=3656 GN=LOC103501619 PE=4 SV=1) HSP 1 Score: 210.7 bits (535), Expect = 3.5e-51 Identity = 101/118 (85.59%), Postives = 107/118 (90.68%), Query Frame = 0
BLAST of CmoCh16G009210 vs. TAIR 10
Match: AT4G27280.1 (Calcium-binding EF-hand family protein ) HSP 1 Score: 150.6 bits (379), Expect = 8.2e-37 Identity = 75/109 (68.81%), Postives = 88/109 (80.73%), Query Frame = 0
BLAST of CmoCh16G009210 vs. TAIR 10
Match: AT5G54490.1 (pinoid-binding protein 1 ) HSP 1 Score: 144.1 bits (362), Expect = 7.7e-35 Identity = 73/115 (63.48%), Postives = 88/115 (76.52%), Query Frame = 0
BLAST of CmoCh16G009210 vs. TAIR 10
Match: AT2G46600.1 (Calcium-binding EF-hand family protein ) HSP 1 Score: 120.9 bits (302), Expect = 6.9e-28 Identity = 58/112 (51.79%), Postives = 78/112 (69.64%), Query Frame = 0
BLAST of CmoCh16G009210 vs. TAIR 10
Match: AT4G37010.1 (centrin 2 ) HSP 1 Score: 46.2 bits (108), Expect = 2.2e-05 Identity = 29/97 (29.90%), Postives = 49/97 (50.52%), Query Frame = 0
BLAST of CmoCh16G009210 vs. TAIR 10
Match: AT4G37010.2 (centrin 2 ) HSP 1 Score: 46.2 bits (108), Expect = 2.2e-05 Identity = 29/97 (29.90%), Postives = 49/97 (50.52%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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