CmoCh16G009020 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh16G009020
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	ATP-dependent RNA helicase, putative
Location	Cmo_Chr16: 5319681 .. 5327824 (-)
RNA-Seq Expression	CmoCh16G009020
Synteny	CmoCh16G009020

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTCTTTCAAGGACAGTGTCCGATGACACGAGTGTATCGACATTACACTCCAGCCCATGTGTCAGAGGTTGGTTTATGAACTCACTATCCGATATGGAGTTTGTAAATGACTTAGCATGGACACAAGAGGGTTCATACCTCGATGAGAACCTGAATGGATGTTCGGGATATCTCGATAAGATGAGCAATACATGTGTATAGACATGTTTGAGCAAGCCAAAATGGGCAAGCTGTTCCGAGACATGGGACGACATCACGATGCATGAGTTGGTCGACGAGAGCTAAGATGATGATAAGATGTGACGTTGCTTATGAGAGACCTTGACTTAAAGTAGAGACAAAATCAAGTCTGATGACTTGGTATAGAGTAAAGGCAAGTTAGTTAGAGTTGCAGATGATTGAACATGTACGCACGAACGACGTGTGTGATCAAACAAGTTTGGATTCTACACGGTTGTGTCTGGTTGGTGAAAGCGAATCTTGCCTAAGGTTCGACGAAGCCACAAATTGGGGCGAAAAATGTGAATGAGACTTGAGTTCTCCTTAAAACTTATTATGAATGTGTCAAGATCATGTTGTCGCATGATTGAAAATGTATAATTGTGACCAATCGAGAATGACTTTCAAAAGGAGTAACAATTTTAGTTCATTAAAGACTCCTGATTCAATTTACAGATATGAGAAAAGCAAGCGTCTTTCCTGAATCAACTTTGGTTGCACCAAAAACATCTCGACTACAAAGCACATGAGGCAATGGATTCTTTTATATGTCACTCATATCAATGAACTCAAATTGGCAAGCACGTATCAACATCGATCGATCCTCATCACTGCGTCGGAACATGTAGTTATGTTCGGGATAAAAAAAGGGTCAATTTTTTTTTAAAAAAAAAATTTTATTTTAATTTTTTTATAATAATTATTGTATATATTTTTACAAATATATTATAAATAAAGGAAAATAATTACCGAGCCAAATAACTTATATTTTTTTTTCCAAAAAATTTACTTTTTAATGTTAATTAGGAAAATAATTAGATAATTATGAAATTTAATTTGTAAGCCTAAACCTAAACCCTCGACTGTTCTTTTCCCTTTGTCTCGGAGTCACCCACGACTAGGGGAGTGTTCATCGTGCGACGGCTTATCATCATCCTCTTTTCTTTCTCGGTTTCCGCCGCCGGTTGGCCAACGCCGGTGCTCCCATCGACCAGTGCTCGGCGGTCGGCCATTCTCTCTCTTCAACAGTTCCGATAACGAGCGCGACTCTGTTTTTCTTTCCTCACCGGCTGTGACTACAGGCCCTCAACGACCCTTTCCGGTGGGTTCTAGTGACGACTCGAGGTGAGATTTGTTTCTTAAAAGGTTTTGTGGTTGATTTTATTCGAGTCAAACCCATGAGCTTTCAAAATCGTTTTGAAGTATCCGTTTAGGCTTGGAGCTTGGAGTCGGATAGGTGAAATCATAACTAATCTAAGAAAAACTAGCAAGCATTTGGGTAATTCCCCTCTATATATCAGCCATTGAAATTAAGTTATAAGTTTTTTGTAATTGATTATAACTGGCTTTTGTTTCATCCTTTTTTTTTTGTAAAACTACAGGGGCAATGGAAAGACTCGGAGTCAATGCCAAGGTCTCAGCTAATGATTGCAAGAGCGAAAATATCTCCAGGTATGTACTTATAGTTCTAACCTGTTTTTGGCTACAACTCAATGTTTTGGTAGTAGTTTTGGTGACGTGATTTTGGTTGCTATGCAGGAAGCGAAAAATTGCAGAACATAGAAAGTCACTCCCAGTAGCTTCGGGTACTAACCTAAATTCTTTTGGTCTTCTATTTCAAATTAGTTGTTTTTCTAAGTTCCTGAGAGTTGTTGATTTCTTTTATGTGATTAGTTGAACATCTGCTCATACAAGAGGTGCATAGAAATGATACATTAGTCATCGTTGGTGAAACTGGGAGTGGAAAAACGACGCGTGAGATTCTGTCCCATGTTTTTAAATTTTATACTCGTAGTTACCTTATTGTTATGCTGAACTATTTGTATCCATGTTTTTTAGAAATACCGCAGTTCCTGTTTAATGCTGGATTTTGTCGAGATGGGAAAGCTATTGGGGTGACCCAACCTCGGCGTGTTGCTGCGGTAACTGTTGCTAAAAGAGTTTCTGAGGAATGTGGTGTTGAAGTGGGGCAAAAGGTTGGGTATTCCATTAGATTTGAGGATGTAACTTCTAGTTCCACAAGAATCAAGTACATGACTGATGGTCTATTGCTAAGGTACTATATAGAAACTTTGACTTCTTTTCAAATTGCCATTTCAATGGACGTGCGAATAAGGTTTTGTTACAATTTTTTATTCTATATTTCTTTATTGTCTTTTTGAGTATTCGTATTTGAAGGTGATACTTGATTTTGAATTCACGTTGTTTCCCTCCTCTTGTTCCATGCAATGTATATATTTTTCCACGTAACCTATTTGTTGATAGGCATGATAAATAAAATTTGTTTGATGACTAATACATGAAGTAAATTTTTTTTTTTTATTGACATTCTAATTGTCTCTTTAAGATTTGCAGAACTTAGGGTAAATATGGACTTTGTGCAATTTTCTAACTTAGGTATCATGTTGCTTTTGTAAATTTTCAGGGAAGCACTGTTGGATCCTTTTCTCTCAAGATATTCAGTTATCATTGTTGATGAAGCTCACGAGAGAACAGTTAATACTGATGTATTGTTAGGATTTTTGAAAAAAGTGCAGAAAACTAGATCTAGATCTTTGAATGACTCTTTGAATGCCGAGAACATGCATGCTAATGGCCTAGTGGTAGAAAATGGAAATAATGGTAAATATGCAAGTTCCCTCAGGCAATATCGTGGAAGGAAACTACCTCCATTGAAGTTAATTATCATGTCTGCTAGCTTAGATGCACGCCTTTTCTCTGAGTACTTTGGTGGTGCAAGGGCTCTTCGTGTCCAGGGGCGTCAACATCCAGTGGCTATATTTTATACTCGTAAGCATGTATCAGATTATTTGGAGGCCACTCTTATTACTATATTTCAGGTAGTTATTAAATTCTCACCATGGCTTTTATTAACAATAACATGTAAATTTTCTATCACTTGCTTATTATATAAATGTTTTTCACGACTATTGTTTGTCAAGTTTTGTTTTGAATGTAAACTTTTGAACACCCTGTCTTTCTAATTCATGTAACAATTTCAATGTATTATCACACATATCTTGTGAACTAGATTCATTTGGAGGAGAGTCCCGGTGATATACTTGCATTTTTAACTGGGCAAGAGGAGATAGAATCTATTGAAAATCTTGCCAAGGACAAGATTCAGAAGTTGCCTGAAAGCAAACAGAACATAGTAGTTATTCCTATATATTCAGCCCTTCCATCGGAGCAACAATTGCGAGTTTTTGCCCCAACTCCACCTGGAGTCCGTAAGGTAGTTCAACCACATTGTATTAAATGAATTCTTTATTTTCTTTTCATCCTTTCTCCCAGTCAAATATTATCATTTTAAAAAAATCCTTTTCATTCTCGCATTTTTTTTTATTTTATTTTTTTATTATCTCATAGATTCCTTGTTTGTTTCATATTTGAAATTGATGCTTCTTGGAGTTTTTAAGGTAGTTTAACAACGTTGTATCTAAAGTGTTCATTGTATAAATTTTCTTTTTCCATTCTTTCTCCAAGTCAAATATTATCATTTCAGCATATCTTACTAAAAAGATCCTTTACATTCTTGCATTTTTTTTTTATATCTCCTAGAGTCCTTGTTTGTTTTATATTTGAAATTAATGCTTCTTGCCTAAAGATTTTGCTGGTGGCCCTGCTTTTTAGGTGATATTGGCAACAAACATTGCTGAGACATCCGTGACAATACCTGGGATCAAATATGTTATTGATCCTGGATTTGTAAAAGCACGCACGTATGATCCAAACAAAGGGATGGAATCATTGATTGTTTTTCCAACCTCAAAAGCACAGGCACTACAAAGGAGGTAATATGTTGGATTAAGCATGACTGCATGATTGCTATTATGAAATTTTGTTTAGGCTATAATTCTAGCGAAAAATATTTGAATTTAACTAGTGAGAGTTCTAGTATTAATATTCTAGTGCTTCAGTGGGCGTGCTGGCCGTGAAGGACCTGGAAAATGCTTTCGTCAGTATCCTGAGGATATGTTTTATAAACTTGAGGATTCAACAAAGCCAGAGATAAAGAGATGCAACCTTTCTAATGTCATCTTACAGTTGAAGGCTTTAGGCGTTGATAATATCATGGAATTTGATTTCTTGGAAGAACCGCCAAGGTGCAAGTTTTATAGAGTTTATTGCTTAAGCATGTTGTATGGTTTATCTTTGCATGTGTGGGTGCCGGATGTTTTTATATGTAGGTGTTAAGTGAATAGGAGCTACTACTTTTTATTTTCTTTTATCTACCTTAGCTTCCTCTTACTTGTGGGAAAAAAAGGGAAGAAAAGATAGCTTTTGAGGGGTGGGGGTTGAAAGATGGGAATGTGTCCTTGACCCTTATTTTCAACAGGCAAGCTATTTTCAAGTCGTTGGAGCAATTGATTCTGCTTGGGGCTGTAGCACATGACGGCAAACTATCTAATCCAGTAGGACATTTGATGGCTCGTATTCCATTAGATCCAATATACTCTAAAGCTTTGATTGTTGCCGGTCAGTTCAACTGTTTGGAAGAAATGTTGATAACTGTGTCAATGCTCTCAGTTGAATCCATTTTTTACCACCCTCGTGAGAAGTTAGAAGAGGTCAGTCCACACTTTATACAAATTATGTTGTTTCTATTCCTCTTTTGTTTTTAGATTTTGTCCTCGTATCATAAAAGTTATAGCATGCTACTGTCATTCACTAGTTAATAATTAGAAATATTTCCTATGATGAAGTCTTGTTTAGTCTTCTATTTAACTCTATGGTAAAATTCCATATATTTATTCTGCTTTCAGGCAAGAGCTAAAATGAAATGTTTTTCAAGTCTGGAAGGTGATCATCTCACTCTAATCAATGTGTATCGATCTGCTGAGGAATTTTTGAATAAGAAAAAGTTGGAACTTAGCAAAGAAAAAGTGGAGAAAAGCTTGAAAAAGTGGTGCAAAGAAAATTTTATAAATAGCAGATCTTTGAGACACGCACGTGACGTTCACAGGTTAGCAACAAAATTCCTTGGTTAATGATCATGCATCAAGTGATGAGGTCTCATAGATAATTGATCCCTCTAACTAGAGCACATTCTTCACTTTTGAAATTTTGTTTAAGTTCTATTTTAGTATCTTAATTTATAAATATATTTTTTAGCATTATAACTTTGGATAAAAAAATATTTTAGTCCTTGCCATTAATTTCTTAATGAATTATTTAAAAGGAACTTTGCCGGGGCTCTTCTTTTGTTTATTTAATTGATTATTGAATGTTTACATGCACAAAATGTTTTAAGCTATACATTTTGCATCTCTTCCCACGTATTTTTTAATTGAGTCCGCATCCATCGAGCAGGGTGTAGGCTTTATAGGGTCAGGGTGCTAAATCCCTAGTTAATACTAAGCAGATATACAATTCTTCTTAGAATTCTCATTCTGATTTGATGCAAGTCTTTGAGTCCTTGTTTCATGTCCAAAGTTGCTCTCCTCTTCTCTTATGCTGAGTCCTCCTATTTTACCTGGAATTGAGTTTTTTTCCTTGTCCTTGTCTTTTTACAACCCCCTCCTAATTTCCATTGTTTAAACTGCATCAGTTCTGAGGTTAGCATGGTCTCACAAAGGTTGGTTACAACTTTAATGGGGAGAGTGGGTTTTTGATTACTCCTTTGTGTTAGCCATAGAGCATGTGTGGGGTCTTGAAAGCCACTTCGAGACTACTAGAGGTCATATTGGTTTTCCAAGGCCAAGACTTAATTCTCTGGAGTACCGCTTCCAAGAGAGAATGGTATGGTTGGTTGCTATGCTCTCCTCAATCGGTGAGAAATCATCTTGTTTCAATTGAGCAGTCTCAAGAGCATTTGGGGAAGGAGAAGGGGCAAAAGACAGTTGGACCATGAGTAAGAGGCTAAGGGAGCTGAAAAACCTAGATTGTTCAATTAACTAGGATGGCAAAAAGGCTTTGTCATAAGCTGGGGAACTAAACTTAATGAGGCTTTGTCTCTTGGAATGTGTGGGGTTTGAGTGGGAGGGACAAGTGGAGGCTGCTCAAGGATTTCTTACTTTGGGAAAGGCCAAATGTTGTCACTTTGTTGGAAACTAAGCTCCAAGAATATTGTAGTCTCTTTGTTAAGAGTCTTTAGGTGGTATCATGTTGAGTAGGCAGGGCTGGAGTTAATATGGGCTTTGGAGGCATTCTTTTGATGTGGTATGTGAGAGTTTTTAAGTCTACAATATTCTGAAAGGAGTGTTTTCTCTCTTTGTATATTTTGAGTTCCAAGTTGTGAAGGTAGGATAGTCTTGGATGTGTATGGCCCGTCTAGTCTCAAAGGGAGGAAGGAGTTTTGGGAGCCTCTATGACCTTTATGGTGAGCATTGGTGCTTAGCTGTGAGTTTCAAGGTTATTAGATTCCTGTCTGAGAAGTTTAGTTGAGGAAGAGTCACGAGGTCGGCGAGGAACCTTAATAAAATTATTGAGTGCAAACTCTTAGATCCTTCTCTAGTTATCAATAGGTTTACTCGGTCTAGTGGCAGAGAGAGTGGTGTTTTGTAGATTGGGAAGAATTCGTTTTTACTAATGGGTGGATAATGTTTTCAGGTGATCGTTGAGGGGGCCTAGACTTCAGATCCTTGGCCTATCATCTTTAGATTCGAAAATATTTGGTGACATGGGATTTTGCCCTTTTTAGATTTAAAAACATTTGGTTCTACCACCCTTCTTCTAAAGCTTCTCTTCTGAAGCTTCCCTTTTCCCGTTTAGGACACCTCATGTTTTCCTCTTTGTGGAAGGTTAAAATCCACAAGAAAGTGAAGTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCCTGATGGAGTTAACACTCACGATCATATCCGACGACCTTCATCCTTGATTTTGGATTTGCAGTGGTGTGATCGATGACAACATGCAAGGATCTTGATCATCTTTTGTTGAGTTGCTAGTTTGTGTCCCTTTGGAGTTGGTCAAGTTGTTTAGGATAGACTTGGTACGTAGTAGGAAATGTGGGTCTTTGTTTGAGGAGATTGCGATGAACTCAACCTGTCGTGAAGTTGAGGTCTTGTGGTTGTTATGTTGTTTTTCTATCTTGTTGGAAGTGTGGATGGTGAGGAACAAAAGAATTTTTAGAGGATTGGAGGGTCTTCATAAAATCTTTGGGAAGGCGCAAGGTTTAAAGCCTATTTGTGGGCGTCTTTTGTTGGGCTTTTTTGAATTATCAGCTTAATACTTATTATTCTTTTGGATTGGAGCATGTTCTTATAGGTTGTTGAGGGGTTTTTTTTTTTTTTTTTTGTAGATTGTTTTTTGTATGCGCTTGTACACTCTTTCATTTCTCTCTCAGCTTATGAAAAGCAAAGAACCATATAAATTTTTCATTGTATAATCTTTCCAACCATATATTTTATTGCAGTCAAATTAGGGAACATGTTGAACAAATGAATCTTCCTCTTCACTCTTGTGGAGATGACACGATTCAGTTTTGTAGATGCCTAGCTGCTTCCTTTTTCCTCAACGTAGCCACAAAGCAGCCAGATGGAACATACAGGTATTCATCTGTATGTCTCATGCTTGTATCAATCTCTAATCACGCTTTTTGTAACTTGGGCTTTTGGATTACTCTAGAATAAAGGCCATTCTGGGTCGTGTTTATGATACGTTCTTCATGTAGTTCTAGTTGTCTTGTTAATTTTTTTTAATTCTATCTCACACATGACAAAAAATGCAGGGATTGTGCTAGTGGTGAGGTGGTACAGATTCATCCCTCTTCTGTGCTATTCCGCAAAAAACCAGATTGTGTAATTTTCAACGAGTTCGTGCAAACTAATCACAAGTACATCCGCAATATCACTAGAATTGATCGACTTTGGCTGTCTGAACTGGCTCCGCATTATTATGCACTGCAAAACTAA

mRNA sequence

ATGGGTCTTTCAAGGACAGTGTCCGATGACACGAGTGTATCGACATTACACTCCAGCCCATGTGTCAGAGGGGAGTGTTCATCGTGCGACGGCTTATCATCATCCTCTTTTCTTTCTCGGTTTCCGCCGCCGGTTGGCCAACGCCGGTGCTCCCATCGACCAGTGCTCGGCGGTCGGCCATTCTCTCTCTTCAACAGTTCCGATAACGAGCGCGACTCTGTTTTTCTTTCCTCACCGGCTGTGACTACAGGCCCTCAACGACCCTTTCCGGTGGGTTCTAGTGACGACTCGAGGCTTGGAGCTTGGAGTCGGATAGGTGAAATCATAACTAATCTAAGAAAAACTAGCAAGCATTTGGGGGCAATGGAAAGACTCGGAGTCAATGCCAAGGTCTCAGCTAATGATTGCAAGAGCGAAAATATCTCCAGGAAGCGAAAAATTGCAGAACATAGAAAGTCACTCCCAGTAGCTTCGGTTGAACATCTGCTCATACAAGAGGTGCATAGAAATGATACATTAGTCATCGTTGGTGAAACTGGGAGTGGAAAAACGACGCAAATACCGCAGTTCCTGTTTAATGCTGGATTTTGTCGAGATGGGAAAGCTATTGGGGTGACCCAACCTCGGCGTGTTGCTGCGGTAACTGTTGCTAAAAGAGTTTCTGAGGAATGTGGTGTTGAAGTGGGGCAAAAGGTTGGGTATTCCATTAGATTTGAGGATGTAACTTCTAGTTCCACAAGAATCAAGTACATGACTGATGGTCTATTGCTAAGGGAAGCACTGTTGGATCCTTTTCTCTCAAGATATTCAGTTATCATTGTTGATGAAGCTCACGAGAGAACAGTTAATACTGATGTATTGTTAGGATTTTTGAAAAAAGTGCAGAAAACTAGATCTAGATCTTTGAATGACTCTTTGAATGCCGAGAACATGCATGCTAATGGCCTAGTGGTAGAAAATGGAAATAATGGTAAATATGCAAGTTCCCTCAGGCAATATCGTGGAAGGAAACTACCTCCATTGAAGTTAATTATCATGTCTGCTAGCTTAGATGCACGCCTTTTCTCTGAGTACTTTGGTGGTGCAAGGGCTCTTCGTGTCCAGGGGCGTCAACATCCAGTGGCTATATTTTATACTCGTAAGCATGTATCAGATTATTTGGAGGCCACTCTTATTACTATATTTCAGATTCATTTGGAGGAGAGTCCCGGTGATATACTTGCATTTTTAACTGGGCAAGAGGAGATAGAATCTATTGAAAATCTTGCCAAGGACAAGATTCAGAAGTTGCCTGAAAGCAAACAGAACATAGTAGTTATTCCTATATATTCAGCCCTTCCATCGGAGCAACAATTGCGAGTTTTTGCCCCAACTCCACCTGGAGTCCGTAAGGTGATATTGGCAACAAACATTGCTGAGACATCCGTGACAATACCTGGGATCAAATATGTTATTGATCCTGGATTTGTAAAAGCACGCACGTATGATCCAAACAAAGGGATGGAATCATTGATTGTTTTTCCAACCTCAAAAGCACAGGCACTACAAAGGAGTGGGCGTGCTGGCCGTGAAGGACCTGGAAAATGCTTTCGTCAGTATCCTGAGGATATGTTTTATAAACTTGAGGATTCAACAAAGCCAGAGATAAAGAGATGCAACCTTTCTAATGTCATCTTACAGTTGAAGGCTTTAGGCGTTGATAATATCATGGAATTTGATTTCTTGGAAGAACCGCCAAGGCAAGCTATTTTCAAGTCGTTGGAGCAATTGATTCTGCTTGGGGCTGTAGCACATGACGGCAAACTATCTAATCCAGTAGGACATTTGATGGCTCGTATTCCATTAGATCCAATATACTCTAAAGCTTTGATTGTTGCCGGTCAGTTCAACTGTTTGGAAGAAATGTTGATAACTGTGTCAATGCTCTCAGTTGAATCCATTTTTTACCACCCTCGTGAGAAGTTAGAAGAGGCAAGAGCTAAAATGAAATGTTTTTCAAGTCTGGAAGGTGATCATCTCACTCTAATCAATGTGTATCGATCTGCTGAGGAATTTTTGAATAAGAAAAAGTTGGAACTTAGCAAAGAAAAAGTGGAGAAAAGCTTGAAAAAGTGGTGCAAAGAAAATTTTATAAATAGCAGATCTTTGAGACACGCACGTGACGTTCACAGTCAAATTAGGGAACATGTTGAACAAATGAATCTTCCTCTTCACTCTTGTGGAGATGACACGATTCAGTTTTGTAGATGCCTAGCTGCTTCCTTTTTCCTCAACGTAGCCACAAAGCAGCCAGATGGAACATACAGGGATTGTGCTAGTGGTGAGGTGGTACAGATTCATCCCTCTTCTGTGCTATTCCGCAAAAAACCAGATTGTGTAATTTTCAACGAGTTCGTGCAAACTAATCACAAGTACATCCGCAATATCACTAGAATTGATCGACTTTGGCTGTCTGAACTGGCTCCGCATTATTATGCACTGCAAAACTAA

Coding sequence (CDS)

ATGGGTCTTTCAAGGACAGTGTCCGATGACACGAGTGTATCGACATTACACTCCAGCCCATGTGTCAGAGGGGAGTGTTCATCGTGCGACGGCTTATCATCATCCTCTTTTCTTTCTCGGTTTCCGCCGCCGGTTGGCCAACGCCGGTGCTCCCATCGACCAGTGCTCGGCGGTCGGCCATTCTCTCTCTTCAACAGTTCCGATAACGAGCGCGACTCTGTTTTTCTTTCCTCACCGGCTGTGACTACAGGCCCTCAACGACCCTTTCCGGTGGGTTCTAGTGACGACTCGAGGCTTGGAGCTTGGAGTCGGATAGGTGAAATCATAACTAATCTAAGAAAAACTAGCAAGCATTTGGGGGCAATGGAAAGACTCGGAGTCAATGCCAAGGTCTCAGCTAATGATTGCAAGAGCGAAAATATCTCCAGGAAGCGAAAAATTGCAGAACATAGAAAGTCACTCCCAGTAGCTTCGGTTGAACATCTGCTCATACAAGAGGTGCATAGAAATGATACATTAGTCATCGTTGGTGAAACTGGGAGTGGAAAAACGACGCAAATACCGCAGTTCCTGTTTAATGCTGGATTTTGTCGAGATGGGAAAGCTATTGGGGTGACCCAACCTCGGCGTGTTGCTGCGGTAACTGTTGCTAAAAGAGTTTCTGAGGAATGTGGTGTTGAAGTGGGGCAAAAGGTTGGGTATTCCATTAGATTTGAGGATGTAACTTCTAGTTCCACAAGAATCAAGTACATGACTGATGGTCTATTGCTAAGGGAAGCACTGTTGGATCCTTTTCTCTCAAGATATTCAGTTATCATTGTTGATGAAGCTCACGAGAGAACAGTTAATACTGATGTATTGTTAGGATTTTTGAAAAAAGTGCAGAAAACTAGATCTAGATCTTTGAATGACTCTTTGAATGCCGAGAACATGCATGCTAATGGCCTAGTGGTAGAAAATGGAAATAATGGTAAATATGCAAGTTCCCTCAGGCAATATCGTGGAAGGAAACTACCTCCATTGAAGTTAATTATCATGTCTGCTAGCTTAGATGCACGCCTTTTCTCTGAGTACTTTGGTGGTGCAAGGGCTCTTCGTGTCCAGGGGCGTCAACATCCAGTGGCTATATTTTATACTCGTAAGCATGTATCAGATTATTTGGAGGCCACTCTTATTACTATATTTCAGATTCATTTGGAGGAGAGTCCCGGTGATATACTTGCATTTTTAACTGGGCAAGAGGAGATAGAATCTATTGAAAATCTTGCCAAGGACAAGATTCAGAAGTTGCCTGAAAGCAAACAGAACATAGTAGTTATTCCTATATATTCAGCCCTTCCATCGGAGCAACAATTGCGAGTTTTTGCCCCAACTCCACCTGGAGTCCGTAAGGTGATATTGGCAACAAACATTGCTGAGACATCCGTGACAATACCTGGGATCAAATATGTTATTGATCCTGGATTTGTAAAAGCACGCACGTATGATCCAAACAAAGGGATGGAATCATTGATTGTTTTTCCAACCTCAAAAGCACAGGCACTACAAAGGAGTGGGCGTGCTGGCCGTGAAGGACCTGGAAAATGCTTTCGTCAGTATCCTGAGGATATGTTTTATAAACTTGAGGATTCAACAAAGCCAGAGATAAAGAGATGCAACCTTTCTAATGTCATCTTACAGTTGAAGGCTTTAGGCGTTGATAATATCATGGAATTTGATTTCTTGGAAGAACCGCCAAGGCAAGCTATTTTCAAGTCGTTGGAGCAATTGATTCTGCTTGGGGCTGTAGCACATGACGGCAAACTATCTAATCCAGTAGGACATTTGATGGCTCGTATTCCATTAGATCCAATATACTCTAAAGCTTTGATTGTTGCCGGTCAGTTCAACTGTTTGGAAGAAATGTTGATAACTGTGTCAATGCTCTCAGTTGAATCCATTTTTTACCACCCTCGTGAGAAGTTAGAAGAGGCAAGAGCTAAAATGAAATGTTTTTCAAGTCTGGAAGGTGATCATCTCACTCTAATCAATGTGTATCGATCTGCTGAGGAATTTTTGAATAAGAAAAAGTTGGAACTTAGCAAAGAAAAAGTGGAGAAAAGCTTGAAAAAGTGGTGCAAAGAAAATTTTATAAATAGCAGATCTTTGAGACACGCACGTGACGTTCACAGTCAAATTAGGGAACATGTTGAACAAATGAATCTTCCTCTTCACTCTTGTGGAGATGACACGATTCAGTTTTGTAGATGCCTAGCTGCTTCCTTTTTCCTCAACGTAGCCACAAAGCAGCCAGATGGAACATACAGGGATTGTGCTAGTGGTGAGGTGGTACAGATTCATCCCTCTTCTGTGCTATTCCGCAAAAAACCAGATTGTGTAATTTTCAACGAGTTCGTGCAAACTAATCACAAGTACATCCGCAATATCACTAGAATTGATCGACTTTGGCTGTCTGAACTGGCTCCGCATTATTATGCACTGCAAAACTAA

Protein sequence

MGLSRTVSDDTSVSTLHSSPCVRGECSSCDGLSSSSFLSRFPPPVGQRRCSHRPVLGGRPFSLFNSSDNERDSVFLSSPAVTTGPQRPFPVGSSDDSRLGAWSRIGEIITNLRKTSKHLGAMERLGVNAKVSANDCKSENISRKRKIAEHRKSLPVASVEHLLIQEVHRNDTLVIVGETGSGKTTQIPQFLFNAGFCRDGKAIGVTQPRRVAAVTVAKRVSEECGVEVGQKVGYSIRFEDVTSSSTRIKYMTDGLLLREALLDPFLSRYSVIIVDEAHERTVNTDVLLGFLKKVQKTRSRSLNDSLNAENMHANGLVVENGNNGKYASSLRQYRGRKLPPLKLIIMSASLDARLFSEYFGGARALRVQGRQHPVAIFYTRKHVSDYLEATLITIFQIHLEESPGDILAFLTGQEEIESIENLAKDKIQKLPESKQNIVVIPIYSALPSEQQLRVFAPTPPGVRKVILATNIAETSVTIPGIKYVIDPGFVKARTYDPNKGMESLIVFPTSKAQALQRSGRAGREGPGKCFRQYPEDMFYKLEDSTKPEIKRCNLSNVILQLKALGVDNIMEFDFLEEPPRQAIFKSLEQLILLGAVAHDGKLSNPVGHLMARIPLDPIYSKALIVAGQFNCLEEMLITVSMLSVESIFYHPREKLEEARAKMKCFSSLEGDHLTLINVYRSAEEFLNKKKLELSKEKVEKSLKKWCKENFINSRSLRHARDVHSQIREHVEQMNLPLHSCGDDTIQFCRCLAASFFLNVATKQPDGTYRDCASGEVVQIHPSSVLFRKKPDCVIFNEFVQTNHKYIRNITRIDRLWLSELAPHYYALQN

Homology

[Close]

BLAST of CmoCh16G009020 vs. ExPASy Swiss-Prot
Match: F4IE66 (Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 OS=Arabidopsis thaliana OX=3702 GN=RID1 PE=1 SV=1)

HSP 1 Score: 950.3 bits (2455), Expect = 1.5e-275
Identity = 471/707 (66.62%), Postives = 578/707 (81.75%), Query Frame = 0


Query: 120 GAMERLGVNAKVSANDCKSENISRKRKIAEHRKSLPVASVEHLLIQEVHRNDTLVIVGET 179
           G ++    N++ +         S ++KIAEHR+SLP+ASVE  L++EV +ND L+IVGET
Sbjct: 7   GELKSFVQNSRPNPKSPTVSPFSMRQKIAEHRRSLPIASVEKRLVEEVQKNDILIIVGET 66

Query: 180 GSGKTTQIPQFLFNAGFCRDGKAIGVTQPRRVAAVTVAKRVSEECGVEVGQKVGYSIRFE 239
           GSGKTTQ+PQFL+NAGFCR+GK IG+TQPRR+AAVTVAKRV+EEC V++GQKVGYSIRF+
Sbjct: 67  GSGKTTQLPQFLYNAGFCREGKMIGITQPRRIAAVTVAKRVAEECEVQLGQKVGYSIRFD 126

Query: 240 DVTSSSTRIKYMTDGLLLREALLDPFLSRYSVIIVDEAHERTVNTDVLLGFLKKVQKTRS 299
           D TS STR+KYMTDGLLLREALLDP LSRYSVIIVDEAH+R+V+TDVLL  LKK+Q+TRS
Sbjct: 127 DTTSGSTRLKYMTDGLLLREALLDPHLSRYSVIIVDEAHDRSVHTDVLLALLKKIQRTRS 186

Query: 300 RSLNDSLNAENMHANGLVVENGNNGKYASS-LRQYRGRKLPPLKLIIMSASLDARLFSEY 359
           + +++     N+ +         NG   +  L+ Y+GRKL PLKLIIMSASLDAR+FSEY
Sbjct: 187 QPVSEKTEFGNVASQVQTTTRDANGPQQNGVLKGYQGRKLSPLKLIIMSASLDARVFSEY 246

Query: 360 FGGARALRVQGRQHPVAIFYTRKHVSDYLEATLITIFQIHLEESPGDILAFLTGQEEIES 419
           FGGA+A+ VQGRQ PV I YT    SDY++ATL+TIFQIH EE PGDIL FLTGQ+EIES
Sbjct: 247 FGGAKAVHVQGRQFPVDILYTVHPESDYVDATLVTIFQIHFEEKPGDILVFLTGQDEIES 306

Query: 420 IENLAKDKIQKLPESKQNIVVIPIYSALPSEQQLRVFAPTPPGVRKVILATNIAETSVTI 479
           +E L ++++Q +PE K+ ++ + I+SALPSEQQ++VFAP P G RKVILATNIAETS+TI
Sbjct: 307 VERLVQERLQNIPEDKRKLLPLAIFSALPSEQQMKVFAPAPTGFRKVILATNIAETSITI 366

Query: 480 PGIKYVIDPGFVKARTYDPNKGMESLIVFPTSKAQALQRSGRAGREGPGKCFRQYPEDMF 539
           PGI+YVIDPGFVKAR+YDP+KGMESL V P SKAQ LQRSGRAGREGPGK FR YPE  F
Sbjct: 367 PGIRYVIDPGFVKARSYDPSKGMESLDVVPASKAQTLQRSGRAGREGPGKSFRLYPEREF 426

Query: 540 YKLEDSTKPEIKRCNLSNVILQLKALGVDNIMEFDFLEEPPRQAIFKSLEQLILLGAVAH 599
            KLEDSTKPEIKRCNLSN+ILQLKALG+D+I+ FDF+++P R AI K+L +L  LGA+A 
Sbjct: 427 EKLEDSTKPEIKRCNLSNIILQLKALGIDDIVGFDFIDKPSRGAIIKALAELHSLGALAD 486

Query: 600 DGKLSNPVGHLMARIPLDPIYSKALIVAGQFNCLEEMLITVSMLSVESIFYHPREKLEEA 659
           DGKL NPVG+ M+R+PL+P+YSKALI+A QFNCLEEMLITV++LSVESIFY PREK EEA
Sbjct: 487 DGKLENPVGYQMSRLPLEPVYSKALILANQFNCLEEMLITVAVLSVESIFYDPREKREEA 546

Query: 660 RAKMKCFSSLEGDHLTLINVYRSAEEFLNKKKLELSKEKVEKSLKKWCKENFINSRSLRH 719
           R     F+S+EGDHLT ++VYR ++EFL K+K   S   ++K +KKWCKEN++NSRSL+H
Sbjct: 547 RTSKNHFASVEGDHLTYLSVYRESDEFLEKRKAAGSGNNIDKIMKKWCKENYVNSRSLKH 606

Query: 720 ARDVHSQIREHVEQMNLPLHSCGDDTIQFCRCLAASFFLNVATKQPDGTYRDCASGEVVQ 779
           ARD++ QIREHVEQ+   + SCG+D + F RCLAASFFL  A +Q DGTYR   SGEVV 
Sbjct: 607 ARDIYRQIREHVEQIGFNVSSCGNDMLAFRRCLAASFFLKAAQRQLDGTYRALESGEVVH 666

Query: 780 IHPSSVLFRKKPDCVIFNEFVQTNHKYIRNITRIDRLWLSELAPHYY 826
           IHP+SVLFR KP+CVIFNE +QT+ KYI+N+T ID LWLSELAPH++
Sbjct: 667 IHPTSVLFRAKPECVIFNELMQTSKKYIKNLTIIDSLWLSELAPHHF 713

[Close]

BLAST of CmoCh16G009020 vs. ExPASy Swiss-Prot
Match: Q14562 (ATP-dependent RNA helicase DHX8 OS=Homo sapiens OX=9606 GN=DHX8 PE=1 SV=1)

HSP 1 Score: 602.1 bits (1551), Expect = 9.8e-171
Identity = 315/684 (46.05%), Postives = 439/684 (64.18%), Query Frame = 0


Query: 147  IAEHRKSLPVASVEHLLIQEVHRNDTLVIVGETGSGKTTQIPQFLFNAGFCRDGKAIGVT 206
            I E R+SLP+  ++  L+Q VH N  L+++GETGSGKTTQI Q+L  AG+   GK IG T
Sbjct: 558  ILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGK-IGCT 617

Query: 207  QPRRVAAVTVAKRVSEECGVEVGQKVGYSIRFEDVTSSSTRIKYMTDGLLLREALLDPFL 266
            QPRRVAA++VAKRVSEE G  +GQ+VGY+IRFED TS  T IKYMTDG+LLRE L+DP L
Sbjct: 618  QPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDL 677

Query: 267  SRYSVIIVDEAHERTVNTDVLLGFLKKVQKTRSRSLNDSLNAENMHANGLVVENGNNGKY 326
            ++Y++I++DEAHERT++TDVL G LKK  + R                            
Sbjct: 678  TQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQ--------------------------- 737

Query: 327  ASSLRQYRGRKLPPLKLIIMSASLDARLFSEYFGGARALRVQGRQHPVAIFYTRKHVSDY 386
                          +KLI+ SA+LDA  FS+YF  A    + GR +PV I YT++  +DY
Sbjct: 738  -------------DMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDY 797

Query: 387  LEATLITIFQIHLEESPGDILAFLTGQEEIESIENLAKDKIQKLPESKQNIVVIPIYSAL 446
            L+A+LIT+ QIHL E PGDIL FLTGQEEI++   +  ++++ L      ++++P+YSAL
Sbjct: 798  LDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSAL 857

Query: 447  PSEQQLRVFAPTPPGVRKVILATNIAETSVTIPGIKYVIDPGFVKARTYDPNKGMESLIV 506
            PSE Q R+F P PPG RKV++ATNIAETS+TI GI YV+DPGFVK + Y+   G++ L+V
Sbjct: 858  PSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVV 917

Query: 507  FPTSKAQALQRSGRAGREGPGKCFRQYPEDMFY-KLEDSTKPEIKRCNLSNVILQLKALG 566
             P S+AQA QR+GRAGR GPGKC+R Y E  +  ++  +  PEI+R NL++ +L LKA+G
Sbjct: 918  TPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMG 977

Query: 567  VDNIMEFDFLEEPPRQAIFKSLEQLILLGAVAHDGKLSNPVGHLMARIPLDPIYSKALIV 626
            +++++ FDF++ PP + +  ++EQL  LGA+  +G L+  +G  MA  PL+P+  K LI+
Sbjct: 978  INDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTR-LGRRMAEFPLEPMLCKMLIM 1037

Query: 627  AGQFNCLEEMLITVSMLSVESIFYHPREKLEEARAKMKCFSSLEGDHLTLINVYRSAEEF 686
            +    C EEML  VSMLSV+++FY P++K   A  K   F   EGDHLTL+ VY S    
Sbjct: 1038 SVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNS---- 1097

Query: 687  LNKKKLELSKEKVEKSLKKWCKENFINSRSLRHARDVHSQIREHVEQMNLPLHSCGDDTI 746
                       K  K    WC ENFI +RSLR A+D+  Q+   +++  L + SCG  T+
Sbjct: 1098 ----------WKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKSTV 1157

Query: 747  QFCRCLAASFFLNVATKQPDGTYRDCASGEVVQIHPSSVLFRKKPDCVIFNEFVQTNHKY 806
            +  + + + FF N A K P   YR     +VV IHPSS LF ++P+ V+++E V T  +Y
Sbjct: 1158 RVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEY 1185

Query: 807  IRNITRIDRLWLSELAPHYYALQN 830
            +R +T ID  WL E AP ++ + +
Sbjct: 1218 MREVTTIDPRWLVEFAPAFFKVSD 1185

[Close]

BLAST of CmoCh16G009020 vs. ExPASy Swiss-Prot
Match: A2A4P0 (ATP-dependent RNA helicase DHX8 OS=Mus musculus OX=10090 GN=Dhx8 PE=2 SV=1)

HSP 1 Score: 602.1 bits (1551), Expect = 9.8e-171
Identity = 315/684 (46.05%), Postives = 439/684 (64.18%), Query Frame = 0


Query: 147  IAEHRKSLPVASVEHLLIQEVHRNDTLVIVGETGSGKTTQIPQFLFNAGFCRDGKAIGVT 206
            I E R+SLP+  ++  L+Q VH N  L+++GETGSGKTTQI Q+L  AG+   GK IG T
Sbjct: 582  ILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGK-IGCT 641

Query: 207  QPRRVAAVTVAKRVSEECGVEVGQKVGYSIRFEDVTSSSTRIKYMTDGLLLREALLDPFL 266
            QPRRVAA++VAKRVSEE G  +GQ+VGY+IRFED TS  T IKYMTDG+LLRE L+DP L
Sbjct: 642  QPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDL 701

Query: 267  SRYSVIIVDEAHERTVNTDVLLGFLKKVQKTRSRSLNDSLNAENMHANGLVVENGNNGKY 326
            ++Y++I++DEAHERT++TDVL G LKK  + R                            
Sbjct: 702  TQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQ--------------------------- 761

Query: 327  ASSLRQYRGRKLPPLKLIIMSASLDARLFSEYFGGARALRVQGRQHPVAIFYTRKHVSDY 386
                          +KLI+ SA+LDA  FS+YF  A    + GR +PV I YT++  +DY
Sbjct: 762  -------------DMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDY 821

Query: 387  LEATLITIFQIHLEESPGDILAFLTGQEEIESIENLAKDKIQKLPESKQNIVVIPIYSAL 446
            L+A+LIT+ QIHL E PGDIL FLTGQEEI++   +  ++++ L      ++++P+YSAL
Sbjct: 822  LDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSAL 881

Query: 447  PSEQQLRVFAPTPPGVRKVILATNIAETSVTIPGIKYVIDPGFVKARTYDPNKGMESLIV 506
            PSE Q R+F P PPG RKV++ATNIAETS+TI GI YV+DPGFVK + Y+   G++ L+V
Sbjct: 882  PSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVV 941

Query: 507  FPTSKAQALQRSGRAGREGPGKCFRQYPEDMFY-KLEDSTKPEIKRCNLSNVILQLKALG 566
             P S+AQA QR+GRAGR GPGKC+R Y E  +  ++  +  PEI+R NL++ +L LKA+G
Sbjct: 942  TPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMG 1001

Query: 567  VDNIMEFDFLEEPPRQAIFKSLEQLILLGAVAHDGKLSNPVGHLMARIPLDPIYSKALIV 626
            +++++ FDF++ PP + +  ++EQL  LGA+  +G L+  +G  MA  PL+P+  K LI+
Sbjct: 1002 INDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTR-LGRRMAEFPLEPMLCKMLIM 1061

Query: 627  AGQFNCLEEMLITVSMLSVESIFYHPREKLEEARAKMKCFSSLEGDHLTLINVYRSAEEF 686
            +    C EEML  VSMLSV+++FY P++K   A  K   F   EGDHLTL+ VY S    
Sbjct: 1062 SVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNS---- 1121

Query: 687  LNKKKLELSKEKVEKSLKKWCKENFINSRSLRHARDVHSQIREHVEQMNLPLHSCGDDTI 746
                       K  K    WC ENFI +RSLR A+D+  Q+   +++  L + SCG  T+
Sbjct: 1122 ----------WKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKSTV 1181

Query: 747  QFCRCLAASFFLNVATKQPDGTYRDCASGEVVQIHPSSVLFRKKPDCVIFNEFVQTNHKY 806
            +  + + + FF N A K P   YR     +VV IHPSS LF ++P+ V+++E V T  +Y
Sbjct: 1182 RVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEY 1209

Query: 807  IRNITRIDRLWLSELAPHYYALQN 830
            +R +T ID  WL E AP ++ + +
Sbjct: 1242 MREVTTIDPRWLVEFAPAFFKVSD 1209

[Close]

BLAST of CmoCh16G009020 vs. ExPASy Swiss-Prot
Match: Q9H6R0 (ATP-dependent RNA helicase DHX33 OS=Homo sapiens OX=9606 GN=DHX33 PE=1 SV=2)

HSP 1 Score: 597.4 bits (1539), Expect = 2.4e-169
Identity = 328/745 (44.03%), Postives = 463/745 (62.15%), Query Frame = 0


Query: 85  PQRPFPVGSSDDSRLGAWSRIGEIITNLRKTSKHLGAMERLGVNAKVSANDCKSENISRK 144
           P + F  GS   SR G++    +++  L       G+  R G   +         + S  
Sbjct: 9   PAKRFRPGSGPPSRAGSFPPGRQVVMLLT-----AGSGGRGGGGGRRQQPPLAQPSASPY 68

Query: 145 RKIAE-HRKSLPVASVEHLLIQEVHRNDTLVIVGETGSGKTTQIPQFLFNAGFCRDGKAI 204
            +  E  R+SLP+      L+ ++   D  V++GETGSGKTTQIPQ+L+  G  R G  I
Sbjct: 69  PEAVELQRRSLPIFQARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYEGGISRQG-II 128

Query: 205 GVTQPRRVAAVTVAKRVSEECGVEVGQKVGYSIRFEDVTSSSTRIKYMTDGLLLREALLD 264
            VTQPRRVAA+++A RVS+E   E+G+ VGY++RF+DVTS  TRIK++TDG+LLREA+ D
Sbjct: 129 AVTQPRRVAAISLATRVSDEKRTELGKLVGYTVRFDDVTSEDTRIKFLTDGMLLREAISD 188

Query: 265 PFLSRYSVIIVDEAHERTVNTDVLLGFLKKVQKTRSRSLNDSLNAENMHANGLVVENGNN 324
             L +YS +I+DEAHERT++TDVL G +K  QK R                         
Sbjct: 189 SLLRKYSCVILDEAHERTIHTDVLFGVVKAAQKRRKEL---------------------- 248

Query: 325 GKYASSLRQYRGRKLPPLKLIIMSASLDARLFSEYFGGARALRVQGRQHPVAIFYTRKHV 384
           GK              PLK+I+MSA++D  LFS+YF GA  L ++GRQHP+ +FYT++  
Sbjct: 249 GKL-------------PLKVIVMSATMDVDLFSQYFNGAPVLYLEGRQHPIQVFYTKQPQ 308

Query: 385 SDYLEATLITIFQIHLE-ESPGDILAFLTGQEEIESIENLAKDKIQKLPESKQNIVVIPI 444
           +DYL A L+++FQIH E  S  DIL FLTGQEEIE++    +D  + LP+    ++V+P+
Sbjct: 309 NDYLHAALVSVFQIHQEAPSSQDILVFLTGQEEIEAMSKTCRDIAKHLPDGCPAMLVLPL 368

Query: 445 YSALPSEQQLRVFAPTPPGVRKVILATNIAETSVTIPGIKYVIDPGFVKARTYDPNKGME 504
           Y++LP  QQLRVF   P G RKVI++TNIAETS+TI GIKYV+D G VKA+ Y+P+ G+E
Sbjct: 369 YASLPYAQQLRVFQGAPKGYRKVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLE 428

Query: 505 SLIVFPTSKAQALQRSGRAGREGPGKCFRQYPEDMFYKLEDSTKPEIKRCNLSNVILQLK 564
            L V   SK QA QR+GRAGRE  G C+R Y ED F K +  T PEI+RCNL++V+LQL 
Sbjct: 429 VLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEFEKFDKMTVPEIQRCNLASVMLQLL 488

Query: 565 ALGVDNIMEFDFLEEPPRQAIFKSLEQLILLGAVAH-DGKLS-NPVGHLMARIPLDPIYS 624
           A+ V N++ FDF+ +P    I  ++ QL LLGA+ H D +L+  P+G  MA  PL+P ++
Sbjct: 489 AMKVPNVLTFDFMSKPSPDHIQAAIAQLDLLGALEHKDDQLTLTPMGRKMAAFPLEPKFA 548

Query: 625 KALIVAGQFNCLEEMLITVSMLSVESIFYHPREKLEEARAKMKCFSSLEGDHLTLINVYR 684
           K ++++ +F+C EE+L  VS+LSV+S+ ++P  + EE +   K F S EGDH+TL+N+YR
Sbjct: 549 KTILMSPKFHCTEEILTIVSLLSVDSVLHNPPSRREEVQGVRKKFISSEGDHMTLLNIYR 608

Query: 685 SAEEFLNKKKLELSKEKVEKSLKKWCKENFINSRSLRHARDVHSQIREHVEQMNLPLHSC 744
           + +                   K WCKENF+NS+++    +V +Q+R+   +M++P+ S 
Sbjct: 609 TFKNLGGN--------------KDWCKENFVNSKNMTLVAEVRAQLRDICLKMSMPIASS 668

Query: 745 GDDTIQFCRCLAASFFLNVATKQPDGTYRDCASGEVVQIHPSSVLFRKKPDCVIFNEFVQ 804
             D     RCLA S F++ A  QPDGTY    + + V IHPSSVLF  KP CV++ E + 
Sbjct: 669 RGDVESVRRCLAHSLFMSTAELQPDGTYATTDTHQPVAIHPSSVLFHCKPACVVYTELLY 698

Query: 805 TNHKYIRNITRIDRLWLSELAPHYY 826
           TN  Y+R++  ID  WL E AP Y+
Sbjct: 729 TNKCYMRDLCVIDAQWLYEAAPEYF 698

[Close]

BLAST of CmoCh16G009020 vs. ExPASy Swiss-Prot
Match: Q80VY9 (ATP-dependent RNA helicase DHX33 OS=Mus musculus OX=10090 GN=Dhx33 PE=1 SV=1)

HSP 1 Score: 597.0 bits (1538), Expect = 3.2e-169
Identity = 316/679 (46.54%), Postives = 440/679 (64.80%), Query Frame = 0


Query: 151 RKSLPVASVEHLLIQEVHRNDTLVIVGETGSGKTTQIPQFLFNAGFCRDGKAIGVTQPRR 210
           R+SLP+      L+ ++   D  V++GETGSGKTTQIPQ+L+  G  R G  I VTQPRR
Sbjct: 62  RRSLPIFRARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYEGGISRQG-IIAVTQPRR 121

Query: 211 VAAVTVAKRVSEECGVEVGQKVGYSIRFEDVTSSSTRIKYMTDGLLLREALLDPFLSRYS 270
           VAA+++A RVS+E   E+G+ VGY++RFEDVTS  TRIK++TDG+LLREA+ D  L +YS
Sbjct: 122 VAAISLATRVSDEKRTELGKLVGYTVRFEDVTSEDTRIKFLTDGMLLREAISDSLLRKYS 181

Query: 271 VIIVDEAHERTVNTDVLLGFLKKVQKTRSRSLNDSLNAENMHANGLVVENGNNGKYASSL 330
            +I+DEAHERT++TDVL G +K  QK R                         GK     
Sbjct: 182 CVILDEAHERTIHTDVLFGVVKTAQKRRKEL----------------------GKL---- 241

Query: 331 RQYRGRKLPPLKLIIMSASLDARLFSEYFGGARALRVQGRQHPVAIFYTRKHVSDYLEAT 390
                    PLK+I+MSA++D  LFS+YF  A  L ++GRQHP+ IFYT++   DYL A 
Sbjct: 242 ---------PLKVIVMSATMDVDLFSQYFNRAPVLYLEGRQHPIQIFYTKQPQQDYLHAA 301

Query: 391 LITIFQIHLEESPG--DILAFLTGQEEIESIENLAKDKIQKLPESKQNIVVIPIYSALPS 450
           L+++FQIH +E+P   DIL FLTGQEEIE++    +D  + LP+   +++V+P+Y++LP 
Sbjct: 302 LVSVFQIH-QEAPASQDILVFLTGQEEIEAMSKTCRDIARHLPDGCPSMLVLPLYASLPY 361

Query: 451 EQQLRVFAPTPPGVRKVILATNIAETSVTIPGIKYVIDPGFVKARTYDPNKGMESLIVFP 510
            QQLRVF   P G RKVI++TNIAETS+TI GIKYV+D G VKA+ Y+P+ G+E L V  
Sbjct: 362 SQQLRVFQGAPKGYRKVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQR 421

Query: 511 TSKAQALQRSGRAGREGPGKCFRQYPEDMFYKLEDSTKPEIKRCNLSNVILQLKALGVDN 570
            SK QA QR+GRAGRE  G C+R Y ED F K E  T PEI+RCNL++VILQL A+ V N
Sbjct: 422 VSKTQAWQRTGRAGREDSGICYRLYTEDEFEKFEKMTVPEIQRCNLASVILQLLAMKVPN 481

Query: 571 IMEFDFLEEPPRQAIFKSLEQLILLGAVAH-DGKLS-NPVGHLMARIPLDPIYSKALIVA 630
           ++ FDF+ +P    I  ++ QL LLGA+ H D +L+  P+G  MA  PL+P ++K ++++
Sbjct: 482 VLTFDFMSKPSPDHIEAAIAQLDLLGALEHKDDQLTLTPIGRKMAAFPLEPRFAKTILLS 541

Query: 631 GQFNCLEEMLITVSMLSVESIFYHPREKLEEARAKMKCFSSLEGDHLTLINVYRSAEEFL 690
            +F+C EE+L  VS+LSV+S+ Y+P  + +E ++  K F S EGDH+TL+N+YR+ +   
Sbjct: 542 SKFHCTEEILTIVSLLSVDSVLYNPPARRDEVQSVRKKFISSEGDHITLLNIYRTFKNIG 601

Query: 691 NKKKLELSKEKVEKSLKKWCKENFINSRSLRHARDVHSQIREHVEQMNLPLHSCGDDTIQ 750
                           K WCKENF+NS+++    +V +Q+RE   +M++P+ S   D   
Sbjct: 602 GN--------------KDWCKENFVNSKNMLLVAEVRAQLREICLKMSMPIMSSRGDMES 661

Query: 751 FCRCLAASFFLNVATKQPDGTYRDCASGEVVQIHPSSVLFRKKPDCVIFNEFVQTNHKYI 810
             RC+A S F+N A  Q DGTY    + + V IHPSSVLF  KP CV++   + TN  Y+
Sbjct: 662 VRRCMAHSLFMNTAELQTDGTYATTDTHQPVAIHPSSVLFHCKPACVVYTSLLYTNKCYM 689

Query: 811 RNITRIDRLWLSELAPHYY 826
           R++  +D  WL E AP Y+
Sbjct: 722 RDLCVVDAEWLYEAAPDYF 689

[Close]

BLAST of CmoCh16G009020 vs. ExPASy TrEMBL
Match: A0A6J1EVL1 (pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 OS=Cucurbita moschata OX=3662 GN=LOC111438478 PE=4 SV=1)

HSP 1 Score: 1397.1 bits (3615), Expect = 0.0e+00
Identity = 708/708 (100.00%), Postives = 708/708 (100.00%), Query Frame = 0


Query: 122 MERLGVNAKVSANDCKSENISRKRKIAEHRKSLPVASVEHLLIQEVHRNDTLVIVGETGS 181
           MERLGVNAKVSANDCKSENISRKRKIAEHRKSLPVASVEHLLIQEVHRNDTLVIVGETGS
Sbjct: 1   MERLGVNAKVSANDCKSENISRKRKIAEHRKSLPVASVEHLLIQEVHRNDTLVIVGETGS 60

Query: 182 GKTTQIPQFLFNAGFCRDGKAIGVTQPRRVAAVTVAKRVSEECGVEVGQKVGYSIRFEDV 241
           GKTTQIPQFLFNAGFCRDGKAIGVTQPRRVAAVTVAKRVSEECGVEVGQKVGYSIRFEDV
Sbjct: 61  GKTTQIPQFLFNAGFCRDGKAIGVTQPRRVAAVTVAKRVSEECGVEVGQKVGYSIRFEDV 120

Query: 242 TSSSTRIKYMTDGLLLREALLDPFLSRYSVIIVDEAHERTVNTDVLLGFLKKVQKTRSRS 301
           TSSSTRIKYMTDGLLLREALLDPFLSRYSVIIVDEAHERTVNTDVLLGFLKKVQKTRSRS
Sbjct: 121 TSSSTRIKYMTDGLLLREALLDPFLSRYSVIIVDEAHERTVNTDVLLGFLKKVQKTRSRS 180

Query: 302 LNDSLNAENMHANGLVVENGNNGKYASSLRQYRGRKLPPLKLIIMSASLDARLFSEYFGG 361
           LNDSLNAENMHANGLVVENGNNGKYASSLRQYRGRKLPPLKLIIMSASLDARLFSEYFGG
Sbjct: 181 LNDSLNAENMHANGLVVENGNNGKYASSLRQYRGRKLPPLKLIIMSASLDARLFSEYFGG 240

Query: 362 ARALRVQGRQHPVAIFYTRKHVSDYLEATLITIFQIHLEESPGDILAFLTGQEEIESIEN 421
           ARALRVQGRQHPVAIFYTRKHVSDYLEATLITIFQIHLEESPGDILAFLTGQEEIESIEN
Sbjct: 241 ARALRVQGRQHPVAIFYTRKHVSDYLEATLITIFQIHLEESPGDILAFLTGQEEIESIEN 300

Query: 422 LAKDKIQKLPESKQNIVVIPIYSALPSEQQLRVFAPTPPGVRKVILATNIAETSVTIPGI 481
           LAKDKIQKLPESKQNIVVIPIYSALPSEQQLRVFAPTPPGVRKVILATNIAETSVTIPGI
Sbjct: 301 LAKDKIQKLPESKQNIVVIPIYSALPSEQQLRVFAPTPPGVRKVILATNIAETSVTIPGI 360

Query: 482 KYVIDPGFVKARTYDPNKGMESLIVFPTSKAQALQRSGRAGREGPGKCFRQYPEDMFYKL 541
           KYVIDPGFVKARTYDPNKGMESLIVFPTSKAQALQRSGRAGREGPGKCFRQYPEDMFYKL
Sbjct: 361 KYVIDPGFVKARTYDPNKGMESLIVFPTSKAQALQRSGRAGREGPGKCFRQYPEDMFYKL 420

Query: 542 EDSTKPEIKRCNLSNVILQLKALGVDNIMEFDFLEEPPRQAIFKSLEQLILLGAVAHDGK 601
           EDSTKPEIKRCNLSNVILQLKALGVDNIMEFDFLEEPPRQAIFKSLEQLILLGAVAHDGK
Sbjct: 421 EDSTKPEIKRCNLSNVILQLKALGVDNIMEFDFLEEPPRQAIFKSLEQLILLGAVAHDGK 480

Query: 602 LSNPVGHLMARIPLDPIYSKALIVAGQFNCLEEMLITVSMLSVESIFYHPREKLEEARAK 661
           LSNPVGHLMARIPLDPIYSKALIVAGQFNCLEEMLITVSMLSVESIFYHPREKLEEARAK
Sbjct: 481 LSNPVGHLMARIPLDPIYSKALIVAGQFNCLEEMLITVSMLSVESIFYHPREKLEEARAK 540

Query: 662 MKCFSSLEGDHLTLINVYRSAEEFLNKKKLELSKEKVEKSLKKWCKENFINSRSLRHARD 721
           MKCFSSLEGDHLTLINVYRSAEEFLNKKKLELSKEKVEKSLKKWCKENFINSRSLRHARD
Sbjct: 541 MKCFSSLEGDHLTLINVYRSAEEFLNKKKLELSKEKVEKSLKKWCKENFINSRSLRHARD 600

Query: 722 VHSQIREHVEQMNLPLHSCGDDTIQFCRCLAASFFLNVATKQPDGTYRDCASGEVVQIHP 781
           VHSQIREHVEQMNLPLHSCGDDTIQFCRCLAASFFLNVATKQPDGTYRDCASGEVVQIHP
Sbjct: 601 VHSQIREHVEQMNLPLHSCGDDTIQFCRCLAASFFLNVATKQPDGTYRDCASGEVVQIHP 660

Query: 782 SSVLFRKKPDCVIFNEFVQTNHKYIRNITRIDRLWLSELAPHYYALQN 830
           SSVLFRKKPDCVIFNEFVQTNHKYIRNITRIDRLWLSELAPHYYALQN
Sbjct: 661 SSVLFRKKPDCVIFNEFVQTNHKYIRNITRIDRLWLSELAPHYYALQN 708

[Close]

BLAST of CmoCh16G009020 vs. ExPASy TrEMBL
Match: A0A6J1JAN7 (pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 OS=Cucurbita maxima OX=3661 GN=LOC111483262 PE=4 SV=1)

HSP 1 Score: 1389.0 bits (3594), Expect = 0.0e+00
Identity = 707/712 (99.30%), Postives = 707/712 (99.30%), Query Frame = 0


Query: 122 MERLGVNAKVSANDCKSENISRKRKIAEHRKSLPVASVEHLLIQEVHRNDTLVIVGETGS 181
           ME LGVNAKVSANDCKSENISRKRKIAEHRKSLPVASVEHLLIQEVHRNDTLVIVGETGS
Sbjct: 1   METLGVNAKVSANDCKSENISRKRKIAEHRKSLPVASVEHLLIQEVHRNDTLVIVGETGS 60

Query: 182 GKTTQIPQFLFNAGFCRDGKAIGVTQPRRVAAVTVAKRVSEECGVEVGQKVGYSIRFEDV 241
           GKTTQIPQFLFNAGFCRDGKAIGVTQPRRVAAVTVAKRVSEECGVEVGQKVGYSIRFEDV
Sbjct: 61  GKTTQIPQFLFNAGFCRDGKAIGVTQPRRVAAVTVAKRVSEECGVEVGQKVGYSIRFEDV 120

Query: 242 TSSSTRIKYMTDGLLLREALLDPFLSRYSVIIVDEAHERTVNTDVLLGFLKKVQKTRSR- 301
           TSSSTRIKYMTDGLLLREALLDPFLSRYSVIIVDEAHERTVNTDVLLGFLKKVQKTRSR 
Sbjct: 121 TSSSTRIKYMTDGLLLREALLDPFLSRYSVIIVDEAHERTVNTDVLLGFLKKVQKTRSRS 180

Query: 302 ---SLNDSLNAENMHANGLVVENGNNGKYASSLRQYRGRKLPPLKLIIMSASLDARLFSE 361
              SLNDSLNAENMHANGLVVENGNNGKYASSLRQYRGRKLPPLKLIIMSASLDARLFSE
Sbjct: 181 LNDSLNDSLNAENMHANGLVVENGNNGKYASSLRQYRGRKLPPLKLIIMSASLDARLFSE 240

Query: 362 YFGGARALRVQGRQHPVAIFYTRKHVSDYLEATLITIFQIHLEESPGDILAFLTGQEEIE 421
           YFGGARALRVQGRQHPVAIFYTRKHVSDYLEATLITIFQIHLEESPGDILAFLTGQEEIE
Sbjct: 241 YFGGARALRVQGRQHPVAIFYTRKHVSDYLEATLITIFQIHLEESPGDILAFLTGQEEIE 300

Query: 422 SIENLAKDKIQKLPESKQNIVVIPIYSALPSEQQLRVFAPTPPGVRKVILATNIAETSVT 481
           SIENLAKDKIQKLPESKQNIVVIPIYSALPSEQQLRVFAPTPPGVRKVILATNIAETSVT
Sbjct: 301 SIENLAKDKIQKLPESKQNIVVIPIYSALPSEQQLRVFAPTPPGVRKVILATNIAETSVT 360

Query: 482 IPGIKYVIDPGFVKARTYDPNKGMESLIVFPTSKAQALQRSGRAGREGPGKCFRQYPEDM 541
           IPGIKYVIDPGFVKARTYDPNKGMESLIVFPTSKAQALQRSGRAGREGPGKCFRQYPEDM
Sbjct: 361 IPGIKYVIDPGFVKARTYDPNKGMESLIVFPTSKAQALQRSGRAGREGPGKCFRQYPEDM 420

Query: 542 FYKLEDSTKPEIKRCNLSNVILQLKALGVDNIMEFDFLEEPPRQAIFKSLEQLILLGAVA 601
           FYKLEDSTKPEIKRCNLSNVILQLKALGVDNIMEFDFLEEPPRQAIFKSLEQLILLGAVA
Sbjct: 421 FYKLEDSTKPEIKRCNLSNVILQLKALGVDNIMEFDFLEEPPRQAIFKSLEQLILLGAVA 480

Query: 602 HDGKLSNPVGHLMARIPLDPIYSKALIVAGQFNCLEEMLITVSMLSVESIFYHPREKLEE 661
           HDGKLSNPVGHLMARIPLDPIYSKALIVAGQFNCLEEMLITVSMLSVESIFYHPREKLEE
Sbjct: 481 HDGKLSNPVGHLMARIPLDPIYSKALIVAGQFNCLEEMLITVSMLSVESIFYHPREKLEE 540

Query: 662 ARAKMKCFSSLEGDHLTLINVYRSAEEFLNKKKLELSKEKVEKSLKKWCKENFINSRSLR 721
           ARAKMKCFSSLEGDHLTLINVYRSAEEFLNKKKLELSKEKVEKSLKKWCKENFINSRSLR
Sbjct: 541 ARAKMKCFSSLEGDHLTLINVYRSAEEFLNKKKLELSKEKVEKSLKKWCKENFINSRSLR 600

Query: 722 HARDVHSQIREHVEQMNLPLHSCGDDTIQFCRCLAASFFLNVATKQPDGTYRDCASGEVV 781
           HARDVHSQIREHVEQMNLPLHSCGDDTIQFCRCLAASFFLNVATKQPDGTYRDCASGEVV
Sbjct: 601 HARDVHSQIREHVEQMNLPLHSCGDDTIQFCRCLAASFFLNVATKQPDGTYRDCASGEVV 660

Query: 782 QIHPSSVLFRKKPDCVIFNEFVQTNHKYIRNITRIDRLWLSELAPHYYALQN 830
           QIHPSSVLFRKKPDCVIFNEFVQTNHKYIRNITRIDRLWLSELAPHYYALQN
Sbjct: 661 QIHPSSVLFRKKPDCVIFNEFVQTNHKYIRNITRIDRLWLSELAPHYYALQN 712

[Close]

BLAST of CmoCh16G009020 vs. ExPASy TrEMBL
Match: A0A1S3CJ82 (pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 OS=Cucumis melo OX=3656 GN=LOC103501587 PE=4 SV=1)

HSP 1 Score: 1276.2 bits (3301), Expect = 0.0e+00
Identity = 643/708 (90.82%), Postives = 677/708 (95.62%), Query Frame = 0


Query: 122 MERLGVNAKVSANDCKSENISRKRKIAEHRKSLPVASVEHLLIQEVHRNDTLVIVGETGS 181
           MER G+N KVS NDCKSENISRKRK+AEHRKSLPVASVE+LLIQEV RNDTL+IVGETGS
Sbjct: 1   MERQGLNVKVSNNDCKSENISRKRKLAEHRKSLPVASVENLLIQEVLRNDTLIIVGETGS 60

Query: 182 GKTTQIPQFLFNAGFCRDGKAIGVTQPRRVAAVTVAKRVSEECGVEVGQKVGYSIRFEDV 241
           GKTTQIPQFLFNAGFCRDGKAIGVTQPRRVAAVTVAKRV+EECGVEVGQKVGYSIRFEDV
Sbjct: 61  GKTTQIPQFLFNAGFCRDGKAIGVTQPRRVAAVTVAKRVAEECGVEVGQKVGYSIRFEDV 120

Query: 242 TSSSTRIKYMTDGLLLREALLDPFLSRYSVIIVDEAHERTVNTDVLLGFLKKVQKTRSRS 301
           TSSSTRIKYMTDGLLLREALLDP+LSRYSVIIVDEAHERTV+TDVLLGFLKKVQKTRSRS
Sbjct: 121 TSSSTRIKYMTDGLLLREALLDPYLSRYSVIIVDEAHERTVHTDVLLGFLKKVQKTRSRS 180

Query: 302 LNDSLNAENMHANGLVVENGNNGKYASSLRQYRGRKLPPLKLIIMSASLDARLFSEYFGG 361
           LNDS N EN++ NGLV+E GNNGKY SSLRQ+RGRKLPPLKLIIMSASLDARLFSEYFGG
Sbjct: 181 LNDSFNTENVNTNGLVLEKGNNGKYVSSLRQHRGRKLPPLKLIIMSASLDARLFSEYFGG 240

Query: 362 ARALRVQGRQHPVAIFYTRKHVSDYLEATLITIFQIHLEESPGDILAFLTGQEEIESIEN 421
           ARA R+ GRQ+PVAI YTRKHV DY E TLITIFQIHLEESPGDILAFLTGQEEIESIEN
Sbjct: 241 ARAFRIPGRQYPVAISYTRKHVLDYSETTLITIFQIHLEESPGDILAFLTGQEEIESIEN 300

Query: 422 LAKDKIQKLPESKQNIVVIPIYSALPSEQQLRVFAPTPPGVRKVILATNIAETSVTIPGI 481
           LAK+ IQKLPESK+N+VVIPIYSALPSEQQLRVFAPTPPGVRKVILATNIAETSVTIPGI
Sbjct: 301 LAKETIQKLPESKRNLVVIPIYSALPSEQQLRVFAPTPPGVRKVILATNIAETSVTIPGI 360

Query: 482 KYVIDPGFVKARTYDPNKGMESLIVFPTSKAQALQRSGRAGREGPGKCFRQYPEDMFYKL 541
           KYVIDPGFVKARTYDPNKGMESLIVFPTSKAQALQRSGRAGREGPGKCFRQYPEDMFYKL
Sbjct: 361 KYVIDPGFVKARTYDPNKGMESLIVFPTSKAQALQRSGRAGREGPGKCFRQYPEDMFYKL 420

Query: 542 EDSTKPEIKRCNLSNVILQLKALGVDNIMEFDFLEEPPRQAIFKSLEQLILLGAVAHDGK 601
           EDSTKPEIKRCNLSNVILQL ALGVDN+ EFDFLE PPRQAIFKSLEQLILLGA+A+DGK
Sbjct: 421 EDSTKPEIKRCNLSNVILQLTALGVDNVAEFDFLEAPPRQAIFKSLEQLILLGAIANDGK 480

Query: 602 LSNPVGHLMARIPLDPIYSKALIVAGQFNCLEEMLITVSMLSVESIFYHPREKLEEARAK 661
           LS+PVGH MARIPLDPIYSKALIVA Q NCLEEMLITVSMLSVESIFYHPREK EEARAK
Sbjct: 481 LSDPVGHQMARIPLDPIYSKALIVASQSNCLEEMLITVSMLSVESIFYHPREKQEEARAK 540

Query: 662 MKCFSSLEGDHLTLINVYRSAEEFLNKKKLELSKEKVEKSLKKWCKENFINSRSLRHARD 721
           MKCFSS EGDHLTLINVYRSA +FLNKKKLEL+K+K+EKSL+KWCKENFINSRSLRHARD
Sbjct: 541 MKCFSSPEGDHLTLINVYRSAVDFLNKKKLELNKDKLEKSLRKWCKENFINSRSLRHARD 600

Query: 722 VHSQIREHVEQMNLPLHSCGDDTIQFCRCLAASFFLNVATKQPDGTYRDCASGEVVQIHP 781
           +HSQIR HVE+M LPL+SCGDD +QFCRCLA SFFLNVATKQPDGTYRD ASGEVVQIHP
Sbjct: 601 IHSQIRGHVERMGLPLNSCGDDMLQFCRCLAGSFFLNVATKQPDGTYRDFASGEVVQIHP 660

Query: 782 SSVLFRKKPDCVIFNEFVQTNHKYIRNITRIDRLWLSELAPHYYALQN 830
           SSVLFRKKPDCVIFNEFVQTN+KYIRNIT+IDRLWL ELAPHY+AL++
Sbjct: 661 SSVLFRKKPDCVIFNEFVQTNNKYIRNITKIDRLWLLELAPHYHALKS 708

[Close]

BLAST of CmoCh16G009020 vs. ExPASy TrEMBL
Match: A0A0A0L7N3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G077650 PE=4 SV=1)

HSP 1 Score: 1197.2 bits (3096), Expect = 0.0e+00
Identity = 610/673 (90.64%), Postives = 638/673 (94.80%), Query Frame = 0


Query: 122 MERLGVNAKVSANDCKSENISRKRKIAEHRKSLPVASVEHLLIQEVHRNDTLVIVGETGS 181
           MER G++AKVS NDCKSEN+SRKRK+AEHRKSLPVASVE  L+QEV RNDTL+IVGETGS
Sbjct: 1   MERQGLDAKVSTNDCKSENVSRKRKLAEHRKSLPVASVESSLMQEVLRNDTLIIVGETGS 60

Query: 182 GKTTQIPQFLFNAGFCRDGKAIGVTQPRRVAAVTVAKRVSEECGVEVGQKVGYSIRFEDV 241
           GKTTQIPQFLFNAGFCRDGKAIGVTQPRRVAAVTVAKRV+EECGVEVGQKVGYSIRFEDV
Sbjct: 61  GKTTQIPQFLFNAGFCRDGKAIGVTQPRRVAAVTVAKRVAEECGVEVGQKVGYSIRFEDV 120

Query: 242 TSSSTRIKYMTDGLLLREALLDPFLSRYSVIIVDEAHERTVNTDVLLGFLKKVQKTRSRS 301
           TSSSTRIKYMTDGLLLREALLDP+LSRYSVIIVDEAHERTVNTDVLLGFLKKVQKTRSRS
Sbjct: 121 TSSSTRIKYMTDGLLLREALLDPYLSRYSVIIVDEAHERTVNTDVLLGFLKKVQKTRSRS 180

Query: 302 LNDSLNAENMHANGLVVENGNNGKYASSLRQYRGRKLPPLKLIIMSASLDARLFSEYFGG 361
           LNDS N ENM+ NG  +E GNNGKY SSLRQ+RGRKL PLKLIIMSASLDARLFSEYFGG
Sbjct: 181 LNDSFNTENMNTNG-KLEKGNNGKYVSSLRQHRGRKLHPLKLIIMSASLDARLFSEYFGG 240

Query: 362 ARALRVQGRQHPVAIFYTRKHVSDYLEATLITIFQIHLEESPGDILAFLTGQEEIESIEN 421
           A+A RVQGRQ+PVAI YTRKHV DY EATLITIFQIHLEESPGDILAFLTGQ+EIESIE 
Sbjct: 241 AKAFRVQGRQYPVAISYTRKHVLDYTEATLITIFQIHLEESPGDILAFLTGQDEIESIET 300

Query: 422 LAKDKIQKLPESKQNIVVIPIYSALPSEQQLRVFAPTPPGVRKVILATNIAETSVTIPGI 481
           LAK+ IQKLPESK+N+VVIPIYSALPSEQQLRVFAPTPPGVRKVILATNIAETSVTIPGI
Sbjct: 301 LAKETIQKLPESKRNLVVIPIYSALPSEQQLRVFAPTPPGVRKVILATNIAETSVTIPGI 360

Query: 482 KYVIDPGFVKARTYDPNKGMESLIVFPTSKAQALQRSGRAGREGPGKCFRQYPEDMFYKL 541
           KYVIDPGFVKARTYDPNKGMESLIVFPTSKAQALQRSGRAGREGPGKCFRQYPEDMFYKL
Sbjct: 361 KYVIDPGFVKARTYDPNKGMESLIVFPTSKAQALQRSGRAGREGPGKCFRQYPEDMFYKL 420

Query: 542 EDSTKPEIKRCNLSNVILQLKALGVDNIMEFDFLEEPPRQAIFKSLEQLILLGAVAHDG- 601
           EDSTKPEIKRCNLSNVILQL ALGVDN+ EFDFLE PPRQAIFKSLEQLILLGA+ +DG 
Sbjct: 421 EDSTKPEIKRCNLSNVILQLTALGVDNVTEFDFLEAPPRQAIFKSLEQLILLGAITNDGK 480

Query: 602 -KLSNPVGHLMARIPLDPIYSKALIVAGQFNCLEEMLITVSMLSVESIFYHPREKLEEAR 661
            KLS+PVGH MARIPLDPIYSKALIVA QFNCLEEMLITVSMLSVESIFYHPREK EEAR
Sbjct: 481 LKLSDPVGHQMARIPLDPIYSKALIVASQFNCLEEMLITVSMLSVESIFYHPREKQEEAR 540

Query: 662 AKMKCFSSLEGDHLTLINVYRSAEEFLNKKKLELSKEKVEKSLKKWCKENFINSRSLRHA 721
           AKMKCFSS EGDHLTLINVYRSA +FLNKKKLELSKEK+EKSL+KWCKENFINSRSLRHA
Sbjct: 541 AKMKCFSSPEGDHLTLINVYRSAVDFLNKKKLELSKEKLEKSLRKWCKENFINSRSLRHA 600

Query: 722 RDVHSQIREHVEQMNLPLHSCGDDTIQFCRCLAASFFLNVATKQPDGTYRDCASGEVVQI 781
           RD+HSQIR HVEQM LPL+SCGDD +QFCRCLA SFFLNVATKQPDGTYRD +SGEVVQI
Sbjct: 601 RDIHSQIRRHVEQMGLPLNSCGDDMLQFCRCLAGSFFLNVATKQPDGTYRDFSSGEVVQI 660

Query: 782 HPSSVLFRKKPDC 793
           HPSSVLFRKKPDC
Sbjct: 661 HPSSVLFRKKPDC 672

[Close]

BLAST of CmoCh16G009020 vs. ExPASy TrEMBL
Match: A0A6J1DA28 (pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 OS=Momordica charantia OX=3673 GN=LOC111019037 PE=4 SV=1)

HSP 1 Score: 1171.0 bits (3028), Expect = 0.0e+00
Identity = 591/705 (83.83%), Postives = 641/705 (90.92%), Query Frame = 0


Query: 127 VNAKVSANDCKSENISRKRKIAEHRKSLPVASVEHLLIQEVHRNDTLVIVGETGSGKTTQ 186
           + +K SAN CK     ++++I E RKSLP+ASVE LL+Q VH NDTL+IVG+TGSGKTTQ
Sbjct: 1   MESKFSANGCK-----KRKRIEEQRKSLPIASVEKLLVQRVHSNDTLIIVGDTGSGKTTQ 60

Query: 187 IPQFLFNAGFCRDGKAIGVTQPRRVAAVTVAKRVSEECGVEVGQKVGYSIRFEDVTSSST 246
           IPQFLFNAGFCRDG+AIGVTQPRRVAAVTVAKRV+EECGVE+GQKVGYSIRFED TSSST
Sbjct: 61  IPQFLFNAGFCRDGRAIGVTQPRRVAAVTVAKRVAEECGVELGQKVGYSIRFEDETSSST 120

Query: 247 RIKYMTDGLLLREALLDPFLSRYSVIIVDEAHERTVNTDVLLGFLKKVQKTRSRSLNDSL 306
           RIKYMTDGLLLREALLDP+LSRYSVIIVDEAHERTVNTDVLLGFLKKVQ+ RSRSLNDS+
Sbjct: 121 RIKYMTDGLLLREALLDPYLSRYSVIIVDEAHERTVNTDVLLGFLKKVQRARSRSLNDSV 180

Query: 307 --NAENMHANGLVVENGNNGKYASSLRQYRGRKLPPLKLIIMSASLDARLFSEYFGGARA 366
             N ENM+ N +++ENGN GK  SS ++ +GRKLPPLKLIIMSASLDARLFSEYFGGARA
Sbjct: 181 MSNTENMNVNSMMLENGNGGKNDSSFKRCQGRKLPPLKLIIMSASLDARLFSEYFGGARA 240

Query: 367 LRVQGRQHPVAIFYTRKHVSDYLEATLITIFQIHLEESPGDILAFLTGQEEIESIENLAK 426
           + VQGRQ+PV IFY  K   DYLEA LITIFQIHLEESPGDIL FLTGQEEIES+ENL K
Sbjct: 241 VHVQGRQYPVDIFYLYKPDPDYLEAILITIFQIHLEESPGDILTFLTGQEEIESMENLVK 300

Query: 427 DKIQKLPESKQNIVVIPIYSALPSEQQLRVFAPTPPGVRKVILATNIAETSVTIPGIKYV 486
           DKIQKLPE ++N+V IPIYSALPSEQQLRVFAP PPG+RKVILATNIAETS+TIPGIKYV
Sbjct: 301 DKIQKLPEGRRNLVTIPIYSALPSEQQLRVFAPAPPGIRKVILATNIAETSLTIPGIKYV 360

Query: 487 IDPGFVKARTYDPNKGMESLIVFPTSKAQALQRSGRAGREGPGKCFRQYPEDMFYKLEDS 546
           IDPG VKARTYDP+KGMESLI+ PTSK QALQRSGRAGREGPGKCFR YPE  F KLEDS
Sbjct: 361 IDPGLVKARTYDPSKGMESLIIIPTSKEQALQRSGRAGREGPGKCFRLYPEITFDKLEDS 420

Query: 547 TKPEIKRCNLSNVILQLKALGVDNIMEFDFLEEPPRQAIFKSLEQLILLGAVAHDGKLSN 606
           TKPEIKRCNLSNVILQLKALGVD+I+ FDFLE+PPRQAI +SLEQL+LL A+  DGKLSN
Sbjct: 421 TKPEIKRCNLSNVILQLKALGVDDIIGFDFLEKPPRQAIIRSLEQLLLLRALTDDGKLSN 480

Query: 607 PVGHLMARIPLDPIYSKALIVAGQFNCLEEMLITVSMLSVESIFYHPREKLEEARAKMKC 666
           P+GH MAR+PLDP+YSKALIVAGQFNCLEEMLITVSMLSVESIFY PREKLEEARAKMKC
Sbjct: 481 PIGHQMARLPLDPMYSKALIVAGQFNCLEEMLITVSMLSVESIFYSPREKLEEARAKMKC 540

Query: 667 FSSLEGDHLTLINVYRSAEEFLNKKKLELSKEKVEKSLKKWCKENFINSRSLRHARDVHS 726
           FSS EGDHLTLINVYRSAEEFL+KK L  SKEKVEKSL+KWCKENFINSRSLRHARDVHS
Sbjct: 541 FSSPEGDHLTLINVYRSAEEFLSKKTLTFSKEKVEKSLRKWCKENFINSRSLRHARDVHS 600

Query: 727 QIREHVEQMNLPLHSCGDDTIQFCRCLAASFFLNVATKQPDGTYRDCASGEVVQIHPSSV 786
           QIR HVEQM+LPL SCG+D +QF RCLAASFFLN ATKQPDGTYRDCASGE VQIHPSSV
Sbjct: 601 QIRGHVEQMSLPLQSCGEDMLQFRRCLAASFFLNAATKQPDGTYRDCASGEAVQIHPSSV 660

Query: 787 LFRKKPDCVIFNEFVQTNHKYIRNITRIDRLWLSELAPHYYALQN 830
           LFRKKPDCVIFNEF+QTNHKYIRN+TRIDRLWL+ELAPH YAL N
Sbjct: 661 LFRKKPDCVIFNEFIQTNHKYIRNLTRIDRLWLTELAPHCYALPN 700

[Close]

BLAST of CmoCh16G009020 vs. TAIR 10
Match: AT1G26370.1 (RNA helicase family protein )

HSP 1 Score: 950.3 bits (2455), Expect = 1.0e-276
Identity = 471/707 (66.62%), Postives = 578/707 (81.75%), Query Frame = 0


Query: 120 GAMERLGVNAKVSANDCKSENISRKRKIAEHRKSLPVASVEHLLIQEVHRNDTLVIVGET 179
           G ++    N++ +         S ++KIAEHR+SLP+ASVE  L++EV +ND L+IVGET
Sbjct: 7   GELKSFVQNSRPNPKSPTVSPFSMRQKIAEHRRSLPIASVEKRLVEEVQKNDILIIVGET 66

Query: 180 GSGKTTQIPQFLFNAGFCRDGKAIGVTQPRRVAAVTVAKRVSEECGVEVGQKVGYSIRFE 239
           GSGKTTQ+PQFL+NAGFCR+GK IG+TQPRR+AAVTVAKRV+EEC V++GQKVGYSIRF+
Sbjct: 67  GSGKTTQLPQFLYNAGFCREGKMIGITQPRRIAAVTVAKRVAEECEVQLGQKVGYSIRFD 126

Query: 240 DVTSSSTRIKYMTDGLLLREALLDPFLSRYSVIIVDEAHERTVNTDVLLGFLKKVQKTRS 299
           D TS STR+KYMTDGLLLREALLDP LSRYSVIIVDEAH+R+V+TDVLL  LKK+Q+TRS
Sbjct: 127 DTTSGSTRLKYMTDGLLLREALLDPHLSRYSVIIVDEAHDRSVHTDVLLALLKKIQRTRS 186

Query: 300 RSLNDSLNAENMHANGLVVENGNNGKYASS-LRQYRGRKLPPLKLIIMSASLDARLFSEY 359
           + +++     N+ +         NG   +  L+ Y+GRKL PLKLIIMSASLDAR+FSEY
Sbjct: 187 QPVSEKTEFGNVASQVQTTTRDANGPQQNGVLKGYQGRKLSPLKLIIMSASLDARVFSEY 246

Query: 360 FGGARALRVQGRQHPVAIFYTRKHVSDYLEATLITIFQIHLEESPGDILAFLTGQEEIES 419
           FGGA+A+ VQGRQ PV I YT    SDY++ATL+TIFQIH EE PGDIL FLTGQ+EIES
Sbjct: 247 FGGAKAVHVQGRQFPVDILYTVHPESDYVDATLVTIFQIHFEEKPGDILVFLTGQDEIES 306

Query: 420 IENLAKDKIQKLPESKQNIVVIPIYSALPSEQQLRVFAPTPPGVRKVILATNIAETSVTI 479
           +E L ++++Q +PE K+ ++ + I+SALPSEQQ++VFAP P G RKVILATNIAETS+TI
Sbjct: 307 VERLVQERLQNIPEDKRKLLPLAIFSALPSEQQMKVFAPAPTGFRKVILATNIAETSITI 366

Query: 480 PGIKYVIDPGFVKARTYDPNKGMESLIVFPTSKAQALQRSGRAGREGPGKCFRQYPEDMF 539
           PGI+YVIDPGFVKAR+YDP+KGMESL V P SKAQ LQRSGRAGREGPGK FR YPE  F
Sbjct: 367 PGIRYVIDPGFVKARSYDPSKGMESLDVVPASKAQTLQRSGRAGREGPGKSFRLYPEREF 426

Query: 540 YKLEDSTKPEIKRCNLSNVILQLKALGVDNIMEFDFLEEPPRQAIFKSLEQLILLGAVAH 599
            KLEDSTKPEIKRCNLSN+ILQLKALG+D+I+ FDF+++P R AI K+L +L  LGA+A 
Sbjct: 427 EKLEDSTKPEIKRCNLSNIILQLKALGIDDIVGFDFIDKPSRGAIIKALAELHSLGALAD 486

Query: 600 DGKLSNPVGHLMARIPLDPIYSKALIVAGQFNCLEEMLITVSMLSVESIFYHPREKLEEA 659
           DGKL NPVG+ M+R+PL+P+YSKALI+A QFNCLEEMLITV++LSVESIFY PREK EEA
Sbjct: 487 DGKLENPVGYQMSRLPLEPVYSKALILANQFNCLEEMLITVAVLSVESIFYDPREKREEA 546

Query: 660 RAKMKCFSSLEGDHLTLINVYRSAEEFLNKKKLELSKEKVEKSLKKWCKENFINSRSLRH 719
           R     F+S+EGDHLT ++VYR ++EFL K+K   S   ++K +KKWCKEN++NSRSL+H
Sbjct: 547 RTSKNHFASVEGDHLTYLSVYRESDEFLEKRKAAGSGNNIDKIMKKWCKENYVNSRSLKH 606

Query: 720 ARDVHSQIREHVEQMNLPLHSCGDDTIQFCRCLAASFFLNVATKQPDGTYRDCASGEVVQ 779
           ARD++ QIREHVEQ+   + SCG+D + F RCLAASFFL  A +Q DGTYR   SGEVV 
Sbjct: 607 ARDIYRQIREHVEQIGFNVSSCGNDMLAFRRCLAASFFLKAAQRQLDGTYRALESGEVVH 666

Query: 780 IHPSSVLFRKKPDCVIFNEFVQTNHKYIRNITRIDRLWLSELAPHYY 826
           IHP+SVLFR KP+CVIFNE +QT+ KYI+N+T ID LWLSELAPH++
Sbjct: 667 IHPTSVLFRAKPECVIFNELMQTSKKYIKNLTIIDSLWLSELAPHHF 713

[Close]

BLAST of CmoCh16G009020 vs. TAIR 10
Match: AT3G26560.1 (ATP-dependent RNA helicase, putative )

HSP 1 Score: 579.3 bits (1492), Expect = 4.8e-165
Identity = 309/687 (44.98%), Postives = 428/687 (62.30%), Query Frame = 0


Query: 144  KRKIAEHRKSLPVASVEHLLIQEVHRNDTLVIVGETGSGKTTQIPQFLFNAGFCRDGKAI 203
            K  I E R+SLP+  ++  LIQ VH N  LV++GETGSGKTTQ+ Q+L  AG+   GK I
Sbjct: 505  KLSIQEQRESLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTKGK-I 564

Query: 204  GVTQPRRVAAVTVAKRVSEECGVEVGQKVGYSIRFEDVTSSSTRIKYMTDGLLLREALLD 263
            G TQPRRVAA++VAKRV+EE G  +G++VGY+IRFED T   T IKYMTDG+LLRE L+D
Sbjct: 565  GCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILID 624

Query: 264  PFLSRYSVIIVDEAHERTVNTDVLLGFLKKVQKTRSRSLNDSLNAENMHANGLVVENGNN 323
              LS+YSVI++DEAHERT++TDVL G LKK+ K R                         
Sbjct: 625  ENLSQYSVIMLDEAHERTIHTDVLFGLLKKLMKRRL------------------------ 684

Query: 324  GKYASSLRQYRGRKLPPLKLIIMSASLDARLFSEYFGGARALRVQGRQHPVAIFYTRKHV 383
                             L+LI+ SA+LDA  FS YF       + GR  PV I YT++  
Sbjct: 685  ----------------DLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPE 744

Query: 384  SDYLEATLITIFQIHLEESPGDILAFLTGQEEIESIENLAKDKIQKLPESKQNIVVIPIY 443
            +DYL+A LIT+ QIHL E  GDIL FLTGQEEI+S      ++++ L ++   ++++P+Y
Sbjct: 745  TDYLDAALITVLQIHLTEPEGDILVFLTGQEEIDSACQSLYERMKGLGKNVPELIILPVY 804

Query: 444  SALPSEQQLRVFAPTPPGVRKVILATNIAETSVTIPGIKYVIDPGFVKARTYDPNKGMES 503
            SALPSE Q R+F P PPG RKV++ATNIAE S+TI GI YV+DPGF K   Y+P +G+ES
Sbjct: 805  SALPSEMQSRIFDPPPPGKRKVVVATNIAEASLTIDGIYYVVDPGFAKQNVYNPKQGLES 864

Query: 504  LIVFPTSKAQALQRSGRAGREGPGKCFRQYPEDMF-YKLEDSTKPEIKRCNLSNVILQLK 563
            L++ P S+A A QR+GRAGR GPGKC+R Y E  +  ++  ++ PEI+R NL    L +K
Sbjct: 865  LVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMPPTSIPEIQRINLGMTTLTMK 924

Query: 564  ALGVDNIMEFDFLEEPPRQAIFKSLEQLILLGAVAHDGKLSNPVGHLMARIPLDPIYSKA 623
            A+G+++++ FDF++ P  QA+  ++EQL  LGA+  +G L+  +G  MA  PL+P  SK 
Sbjct: 925  AMGINDLLSFDFMDPPQPQALISAMEQLYSLGALDEEGLLTK-LGRKMAEFPLEPPLSKM 984

Query: 624  LIVAGQFNCLEEMLITVSMLSVESIFYHPREKLEEARAKMKCFSSLEGDHLTLINVYRSA 683
            L+ +    C +E+L  ++M+   +IFY PREK  +A  K   F   EGDHLTL+ VY + 
Sbjct: 985  LLASVDLGCSDEILTMIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEA- 1044

Query: 684  EEFLNKKKLELSKEKVEKSLKKWCKENFINSRSLRHARDVHSQIREHVEQMNLPLHSCGD 743
                          K +     WC ENFI SRSLR A+DV  Q+   +++  L + + G 
Sbjct: 1045 -------------WKAKNFSGPWCFENFIQSRSLRRAQDVRKQLLSIMDKYKLDVVTAGK 1104

Query: 744  DTIQFCRCLAASFFLNVATKQPDGTYRDCASGEVVQIHPSSVLFRKKPDCVIFNEFVQTN 803
            +  +  + + A FF + A K P   YR     + V IHPSS LF+++PD VI+++ V T 
Sbjct: 1105 NFTKIRKAITAGFFFHGARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHDLVMTT 1135

Query: 804  HKYIRNITRIDRLWLSELAPHYYALQN 830
             +Y+R +T ID  WL ELAP ++ + +
Sbjct: 1165 KEYMREVTVIDPKWLVELAPRFFKVSD 1135

[Close]

BLAST of CmoCh16G009020 vs. TAIR 10
Match: AT1G32490.1 (RNA helicase family protein )

HSP 1 Score: 565.8 bits (1457), Expect = 5.5e-161
Identity = 305/699 (43.63%), Postives = 442/699 (63.23%), Query Frame = 0


Query: 137  KSENISRK---RKIAEHRKSLPVASVEHLLIQEVHRNDTLVIVGETGSGKTTQIPQFLFN 196
            KS++++ K    ++ E R+SLP+ +    L++ V  +  LVIVG+TGSGKTTQIPQ+L  
Sbjct: 384  KSQDLAEKTALEELQEVRRSLPIYTYRDQLLKAVEEHQVLVIVGDTGSGKTTQIPQYLHE 443

Query: 197  AGFCRDGKAIGVTQPRRVAAVTVAKRVSEECGVEVGQKVGYSIRFEDVTSSSTRIKYMTD 256
            AG+ + GK +G TQPRRVAA++VA RV++E GV++G +VGYSIRFED TS  T +KYMTD
Sbjct: 444  AGYTKRGK-VGCTQPRRVAAMSVAARVAQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTD 503

Query: 257  GLLLREALLDPFLSRYSVIIVDEAHERTVNTDVLLGFLKKVQKTRSRSLNDSLNAENMHA 316
            G+LLRE L +P L+ YSV+IVDEAHERT++TD+L G +K + + R               
Sbjct: 504  GMLLRELLGEPDLASYSVVIVDEAHERTLSTDILFGLVKDIARFR--------------- 563

Query: 317  NGLVVENGNNGKYASSLRQYRGRKLPPLKLIIMSASLDARLFSEYFGGARALRVQGRQHP 376
                                     P LKL+I SA++DA  FS+YF  A      GR++P
Sbjct: 564  -------------------------PDLKLLISSATMDAEKFSDYFDTAPIFSFPGRRYP 623

Query: 377  VAIFYTRKHVSDYLEATLITIFQIHLEESPGDILAFLTGQEEIESIENLAKDKIQKLPES 436
            V I YT    +DY++A ++TI  IH+ E  GDIL F TGQEEIE+ E + K +I+ L   
Sbjct: 624  VEINYTSAPEADYMDAAIVTILTIHVREPLGDILVFFTGQEEIETAEEILKHRIRGLGTK 683

Query: 437  KQNIVVIPIYSALPSEQQLRVFAPTPPGVRKVILATNIAETSVTIPGIKYVIDPGFVKAR 496
             + +++ PIY+ LPSE Q ++F PTP G RKV+LATNIAETS+TI GIKYV+DPGF K +
Sbjct: 684  IRELIICPIYANLPSELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVVDPGFSKMK 743

Query: 497  TYDPNKGMESLIVFPTSKAQALQRSGRAGREGPGKCFRQYPEDMFYK-LEDSTKPEIKRC 556
            +Y+P  GMESL++ P SKA A QR+GRAGR  PGKC+R Y    +   LE++T PE++R 
Sbjct: 744  SYNPRTGMESLLITPISKASATQRAGRAGRTSPGKCYRLYTAFNYNNDLEENTVPEVQRT 803

Query: 557  NLSNVILQLKALGVDNIMEFDFLEEPPRQAIFKSLEQLILLGAVAHDGKLSNPVGHLMAR 616
            NL++V+L LK+LG+ +++ FDF++ PP +A+ KSLE L  LGA+   G+L+   G  MA 
Sbjct: 804  NLASVVLALKSLGIHDLINFDFMDPPPAEALVKSLELLFALGALNKLGELTK-AGRRMAE 863

Query: 617  IPLDPIYSKALIVAGQFNCLEEMLITVSMLSV-ESIFYHPREKLEEA-RAKMKCFSSLEG 676
             PLDP+ SK ++V+ ++ C +E++   +MLS+  SIFY P++K   A  A+M   +   G
Sbjct: 864  FPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGGSIFYRPKDKQVHADNARMNFHTGNVG 923

Query: 677  DHLTLINVYRSAEEFLNKKKLELSKEKVEKSLKKWCKENFINSRSLRHARDVHSQIREHV 736
            DH+ L+ VY S +E                   +WC EN+I  RS++ ARD+  Q+   +
Sbjct: 924  DHIALLKVYSSWKE--------------TNFSTQWCYENYIQVRSMKRARDIRDQLEGLL 983

Query: 737  EQMNLPLHSCGDDTIQFCRCLAASFFLNVATKQPDGTYRDCASGEVVQIHPSSVLFRKKP 796
            E++ + + S  ++     + + A FF + A  Q +G+YR     + V IHP+S L +  P
Sbjct: 984  ERVEIDISSNLNELDSVRKSIVAGFFPHTAKLQKNGSYRTVKHPQTVHIHPNSGLSQVLP 1026

Query: 797  DCVIFNEFVQTNHKYIRNITRIDRLWLSELAPHYYALQN 830
              V+++E V T+ +Y+R +T +   WL ELAPHYY L++
Sbjct: 1044 RWVVYHELVLTSKEYMRQVTELKPEWLIELAPHYYQLKD 1026

[Close]

BLAST of CmoCh16G009020 vs. TAIR 10
Match: AT1G32490.2 (RNA helicase family protein )

HSP 1 Score: 565.8 bits (1457), Expect = 5.5e-161
Identity = 305/699 (43.63%), Postives = 442/699 (63.23%), Query Frame = 0


Query: 137  KSENISRK---RKIAEHRKSLPVASVEHLLIQEVHRNDTLVIVGETGSGKTTQIPQFLFN 196
            KS++++ K    ++ E R+SLP+ +    L++ V  +  LVIVG+TGSGKTTQIPQ+L  
Sbjct: 374  KSQDLAEKTALEELQEVRRSLPIYTYRDQLLKAVEEHQVLVIVGDTGSGKTTQIPQYLHE 433

Query: 197  AGFCRDGKAIGVTQPRRVAAVTVAKRVSEECGVEVGQKVGYSIRFEDVTSSSTRIKYMTD 256
            AG+ + GK +G TQPRRVAA++VA RV++E GV++G +VGYSIRFED TS  T +KYMTD
Sbjct: 434  AGYTKRGK-VGCTQPRRVAAMSVAARVAQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTD 493

Query: 257  GLLLREALLDPFLSRYSVIIVDEAHERTVNTDVLLGFLKKVQKTRSRSLNDSLNAENMHA 316
            G+LLRE L +P L+ YSV+IVDEAHERT++TD+L G +K + + R               
Sbjct: 494  GMLLRELLGEPDLASYSVVIVDEAHERTLSTDILFGLVKDIARFR--------------- 553

Query: 317  NGLVVENGNNGKYASSLRQYRGRKLPPLKLIIMSASLDARLFSEYFGGARALRVQGRQHP 376
                                     P LKL+I SA++DA  FS+YF  A      GR++P
Sbjct: 554  -------------------------PDLKLLISSATMDAEKFSDYFDTAPIFSFPGRRYP 613

Query: 377  VAIFYTRKHVSDYLEATLITIFQIHLEESPGDILAFLTGQEEIESIENLAKDKIQKLPES 436
            V I YT    +DY++A ++TI  IH+ E  GDIL F TGQEEIE+ E + K +I+ L   
Sbjct: 614  VEINYTSAPEADYMDAAIVTILTIHVREPLGDILVFFTGQEEIETAEEILKHRIRGLGTK 673

Query: 437  KQNIVVIPIYSALPSEQQLRVFAPTPPGVRKVILATNIAETSVTIPGIKYVIDPGFVKAR 496
             + +++ PIY+ LPSE Q ++F PTP G RKV+LATNIAETS+TI GIKYV+DPGF K +
Sbjct: 674  IRELIICPIYANLPSELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVVDPGFSKMK 733

Query: 497  TYDPNKGMESLIVFPTSKAQALQRSGRAGREGPGKCFRQYPEDMFYK-LEDSTKPEIKRC 556
            +Y+P  GMESL++ P SKA A QR+GRAGR  PGKC+R Y    +   LE++T PE++R 
Sbjct: 734  SYNPRTGMESLLITPISKASATQRAGRAGRTSPGKCYRLYTAFNYNNDLEENTVPEVQRT 793

Query: 557  NLSNVILQLKALGVDNIMEFDFLEEPPRQAIFKSLEQLILLGAVAHDGKLSNPVGHLMAR 616
            NL++V+L LK+LG+ +++ FDF++ PP +A+ KSLE L  LGA+   G+L+   G  MA 
Sbjct: 794  NLASVVLALKSLGIHDLINFDFMDPPPAEALVKSLELLFALGALNKLGELTK-AGRRMAE 853

Query: 617  IPLDPIYSKALIVAGQFNCLEEMLITVSMLSV-ESIFYHPREKLEEA-RAKMKCFSSLEG 676
             PLDP+ SK ++V+ ++ C +E++   +MLS+  SIFY P++K   A  A+M   +   G
Sbjct: 854  FPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGGSIFYRPKDKQVHADNARMNFHTGNVG 913

Query: 677  DHLTLINVYRSAEEFLNKKKLELSKEKVEKSLKKWCKENFINSRSLRHARDVHSQIREHV 736
            DH+ L+ VY S +E                   +WC EN+I  RS++ ARD+  Q+   +
Sbjct: 914  DHIALLKVYSSWKE--------------TNFSTQWCYENYIQVRSMKRARDIRDQLEGLL 973

Query: 737  EQMNLPLHSCGDDTIQFCRCLAASFFLNVATKQPDGTYRDCASGEVVQIHPSSVLFRKKP 796
            E++ + + S  ++     + + A FF + A  Q +G+YR     + V IHP+S L +  P
Sbjct: 974  ERVEIDISSNLNELDSVRKSIVAGFFPHTAKLQKNGSYRTVKHPQTVHIHPNSGLSQVLP 1016

Query: 797  DCVIFNEFVQTNHKYIRNITRIDRLWLSELAPHYYALQN 830
              V+++E V T+ +Y+R +T +   WL ELAPHYY L++
Sbjct: 1034 RWVVYHELVLTSKEYMRQVTELKPEWLIELAPHYYQLKD 1016

[Close]

BLAST of CmoCh16G009020 vs. TAIR 10
Match: AT2G35340.1 (helicase domain-containing protein )

HSP 1 Score: 565.5 bits (1456), Expect = 7.2e-161
Identity = 302/686 (44.02%), Postives = 430/686 (62.68%), Query Frame = 0


Query: 147  IAEHRKSLPVASVEHLLIQEVHRNDTLVIVGETGSGKTTQIPQFLFNAGFCRDGKAIGVT 206
            + E RK+LP+ +    L+  V  +  L+IVGETGSGKTTQIPQ+L  AG+ + GK +G T
Sbjct: 397  LQEDRKALPIYTYRDQLLNAVKDHQVLIIVGETGSGKTTQIPQYLHEAGYTKLGK-VGCT 456

Query: 207  QPRRVAAVTVAKRVSEECGVEVGQKVGYSIRFEDVTSSSTRIKYMTDGLLLREALLDPFL 266
            QPRRVAA++VA RV++E G ++G +VGYSIRFED TS  T +KYMTDG+LLRE L +P L
Sbjct: 457  QPRRVAAMSVAARVAQEMGGKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLRELLGEPDL 516

Query: 267  SRYSVIIVDEAHERTVNTDVLLGFLKKVQKTRSRSLNDSLNAENMHANGLVVENGNNGKY 326
              YSVIIVDEAHERT+ TD+L G +K + + R                            
Sbjct: 517  GSYSVIIVDEAHERTLRTDILFGLVKDIARAR---------------------------- 576

Query: 327  ASSLRQYRGRKLPPLKLIIMSASLDARLFSEYFGGARALRVQGRQHPVAIFYTRKHVSDY 386
                        P LKL+I SA++DA  FS++F  A   R  GR++PV I +T    +DY
Sbjct: 577  ------------PDLKLLISSATMDAEKFSDFFDQAPIFRFPGRRYPVDICFTTAPEADY 636

Query: 387  LEATLITIFQIHLEESPGDILAFLTGQEEIESIENLAKDKIQKLPESKQNIVVIPIYSAL 446
            ++A + T+  IH++E  GD+L FL GQEEIE++E   K KI+ L    + +++ PIY+ L
Sbjct: 637  MDAAITTVLTIHVKEPLGDVLVFLPGQEEIEAVEENLKHKIRGLGTKIRELIICPIYANL 696

Query: 447  PSEQQLRVFAPTPPGVRKVILATNIAETSVTIPGIKYVIDPGFVKARTYDPNKGMESLIV 506
            PSE Q ++F PTP G RKV+LATNIAETS+TI GIKYV+DPGF K ++Y+P  GMESL+V
Sbjct: 697  PSELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLV 756

Query: 507  FPTSKAQALQRSGRAGREGPGKCFRQYPEDMFYK-LEDSTKPEIKRCNLSNVILQLKALG 566
             P SKA A QR+GRAGR  PGKC+R Y    +Y  LED+T PEI+R NL++V+L LK+LG
Sbjct: 757  TPISKASATQRTGRAGRTSPGKCYRLYTAFNYYNDLEDNTVPEIQRTNLASVVLSLKSLG 816

Query: 567  VDNIMEFDFLEEPPRQAIFKSLEQLILLGAVAHDGKLSNPVGHLMARIPLDPIYSKALIV 626
            + N++ FDF++ PP +A+ KSLE L  LGA+   G+L+   G  MA  PLDP+ SK ++V
Sbjct: 817  IHNLLNFDFMDPPPSEALIKSLELLFALGALNQLGELTK-AGRRMAEFPLDPMLSKMIVV 876

Query: 627  AGQFNCLEEMLITVSMLSV-ESIFYHPREKLEEARAKMKCFS-SLEGDHLTLINVYRSAE 686
            + ++ C +E++   +MLS+  SIFY P++K   A   MK F     GDH+  + +Y S +
Sbjct: 877  SDKYKCSDEIISIAAMLSIGPSIFYRPKDKQVHADNAMKNFHVGNVGDHIAFLKIYNSWK 936

Query: 687  EFLNKKKLELSKEKVEKSLKKWCKENFINSRSLRHARDVHSQIREHVEQMNLPLHSCGDD 746
            E                   +WC EN+I  RS++ ARD+  Q+   +E++ + + S  ++
Sbjct: 937  E--------------TNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIDVSSNANE 996

Query: 747  TIQFCRCLAASFFLNVATKQPDGTYRDCASGEVVQIHPSSVLFRKKPDCVIFNEFVQTNH 806
                 + + A FF + A  Q +G+YR     + V IHP+S L +  P  V++++ V T+ 
Sbjct: 997  LDSIRKSIVAGFFPHTAKLQKNGSYRTVKHPQTVHIHPASGLSQVLPRWVVYHQLVLTSK 1026

Query: 807  KYIRNITRIDRLWLSELAPHYYALQN 830
            +Y+R +T +   WL E+APHYY L++
Sbjct: 1057 EYMRQVTELKPEWLIEIAPHYYQLKD 1026

The following BLAST results are available for this feature:

BLAST of CmoCh16G009020 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4IE66	1.5e-275	66.62	Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 OS=Arabidopsis thalia...	[more]
Q14562	9.8e-171	46.05	ATP-dependent RNA helicase DHX8 OS=Homo sapiens OX=9606 GN=DHX8 PE=1 SV=1	[more]
A2A4P0	9.8e-171	46.05	ATP-dependent RNA helicase DHX8 OS=Mus musculus OX=10090 GN=Dhx8 PE=2 SV=1	[more]
Q9H6R0	2.4e-169	44.03	ATP-dependent RNA helicase DHX33 OS=Homo sapiens OX=9606 GN=DHX33 PE=1 SV=2	[more]
Q80VY9	3.2e-169	46.54	ATP-dependent RNA helicase DHX33 OS=Mus musculus OX=10090 GN=Dhx33 PE=1 SV=1	[more]

BLAST of CmoCh16G009020 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EVL1	0.0e+00	100.00	pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 OS=Cucurbita moschata...	[more]
A0A6J1JAN7	0.0e+00	99.30	pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 OS=Cucurbita maxima O...	[more]
A0A1S3CJ82	0.0e+00	90.82	pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 OS=Cucumis melo OX=36...	[more]
A0A0A0L7N3	0.0e+00	90.64	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G077650 PE=4 SV=1	[more]
A0A6J1DA28	0.0e+00	83.83	pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 OS=Momordica charanti...	[more]

BLAST of CmoCh16G009020 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G26370.1	1.0e-276	66.62	RNA helicase family protein	[more]
AT3G26560.1	4.8e-165	44.98	ATP-dependent RNA helicase, putative	[more]
AT1G32490.1	5.5e-161	43.63	RNA helicase family protein	[more]
AT1G32490.2	5.5e-161	43.63	RNA helicase family protein	[more]
AT2G35340.1	7.2e-161	44.02	helicase domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 688..708
None	No IPR available	GENE3D	1.20.120.1080		coord: 569..670 e-value: 8.1E-23 score: 82.4
None	No IPR available	PANTHER	PTHR18934:SF231	BNAA08G19730D PROTEIN	coord: 134..826
None	No IPR available	PANTHER	PTHR18934	ATP-DEPENDENT RNA HELICASE	coord: 134..826
None	No IPR available	CDD	cd18791	SF2_C_RHA	coord: 372..533 e-value: 1.20581E-74 score: 238.587
None	No IPR available	CDD	cd17978	DEXHc_DHX33	coord: 154..365 e-value: 2.9619E-102 score: 311.964
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 420..525 e-value: 3.9E-18 score: 76.2
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 395..524 e-value: 7.6E-15 score: 55.2
IPR001650	Helicase, C-terminal	PROSITE	PS51194	HELICASE_CTER	coord: 391..565 score: 16.434416
IPR007502	Helicase-associated domain	SMART	SM00847	ha2_5	coord: 585..676 e-value: 1.1E-22 score: 91.4
IPR007502	Helicase-associated domain	PFAM	PF04408	HA2	coord: 586..710 e-value: 2.5E-18 score: 66.3
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 152..377 e-value: 2.7E-24 score: 96.7
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 164..368 score: 19.179407
IPR011709	Domain of unknown function DUF1605	PFAM	PF07717	OB_NTP_bind	coord: 749..824 e-value: 2.4E-18 score: 66.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 109..370 e-value: 3.6E-82 score: 276.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 371..544 e-value: 7.1E-66 score: 223.2
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 156..800
IPR002464	DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site	PROSITE	PS00690	DEAH_ATP_HELICASE	coord: 270..279

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh16G009020.1	CmoCh16G009020.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005681	spliceosomal complex
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0003724	RNA helicase activity
molecular_function	GO:0004386	helicase activity