CmoCh16G008960 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh16G008960
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	2-iminobutanoate/2-iminopropanoate deaminase-like
Location	Cmo_Chr16: 5204595 .. 5206074 (-)
RNA-Seq Expression	CmoCh16G008960
Synteny	CmoCh16G008960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTAAACCTATGGCTTACTGCTCAGCAAACAGCTTCCAAATCCCGGCCACCAACGTCATTTCACGGCCGCGCACTGTCACTCCCTCTGTCGGCGCCTCCGTCTCCTTGTGGCGCCGCCCTTCTTCTATTCCATCTATTTCAAACCGCAACATGTCCTTCAAATGCCATGCCATTTCCAAGTGTCGTGGTACTACGCCCTCACTTACTTCCCCTCTCTCTCTCTCTCCCTGGTTCGTGAGAAAATTTGTTCAAACAAAATGTTTTTGTTCAAACAATATGTTTTTCAAATTTTTCCTTTTCTGAGACGGGATTTTCCATCTTTTGATTAGATGGGAGATATATAATGTTTTTTAATAATCGAATTAGGTTGATATTAGCCATTGACATTTATGAGTCTAATTTTGCTTAAATGCTGATGGACTTGTAATGCTTAAAAGCTTTGAATTTTTTATTAACACTTAACCACATAAATGGAGTGAAAGTAAAAAAAAGGCTATGAGTAAAAATTTATTTTTTCCTTCCAAATATTTTCCCATCGTAATATCAACCGCCATCAATATCTTATGTGACAGATATCATACCTATTGAAACCAAAGAGGCTCCAGAAGCATTGGGGCCATATTCTCAAGGCATCATTGCCAACAACTTTATATTTGTGTCTGGCTCCCTAGGTCTGATTCCCGAGGTAGCTTCATCACTTTATGATTTTATTTATTGATACGTTCTACTTTACATTCGTGTTTTAGAATTGGTGGTCGTGTATGCACTTTCCATGAGATCTAATTGAGTGTGTGTTTATGGTTTAATGCAGACAGGAGAATTAATTTCTGATCATGTTGGAGACCAACCGAGCAGGTATTATTTATTATTTTTTTTCATTAGATGTTGGTGTGCTTTGTAGGCCCAAAAGTTCTATAAAAAAAAAAAAAAAAAAATGTAATGAAATATGATTATGCAGGCCCTCAGAAATATAGGTGCAATATTGAGAGCTGGAGGTGCAGACTATAATAGAGTGGTTAAGACAACTATTATGTATGTAATCCTTTTTCGTATATTTTTTAGGTTTTTTTTGGAAAATGGTGTGTTTTTTTTTTTTTTGTCTTGAAACCTACATTTTTACAACAATTCTTTGTTGCAGGCTGGCTGATGTAGCAGACTTTGCATTAGTGAATGAAATTTATGCTCGATGTAAGTTCTTTTCTTTCATTTTTTTGTAATTTTTTTTGTGAAGAAAATGAAACTGAGAGGAGTTCTTGGTCTTTTTTACAGACTTTTCCGAGCAACCTTTTCCAGCTCGGTCAACATTTCAGGTTGGAGCGTTGCCCAAAAATGCCAAGATCGAAATCGATGCAATAGCTTTGGTTTAAACTGTAGTACCTCGACCTGACATGAGCACAGGTTGTGAAGTATCCGATATATTAGTATGGTTTCTTGCTGGTTGTTACCAACATTATTGTAATAATTTTATTATCTCATGGAC

mRNA sequence

TGTAAACCTATGGCTTACTGCTCAGCAAACAGCTTCCAAATCCCGGCCACCAACGTCATTTCACGGCCGCGCACTGTCACTCCCTCTGTCGGCGCCTCCGTCTCCTTGTGGCGCCGCCCTTCTTCTATTCCATCTATTTCAAACCGCAACATGTCCTTCAAATGCCATGCCATTTCCAAGTGTCGTGATATCATACCTATTGAAACCAAAGAGGCTCCAGAAGCATTGGGGCCATATTCTCAAGGCATCATTGCCAACAACTTTATATTTGTGTCTGGCTCCCTAGGTCTGATTCCCGAGACAGGAGAATTAATTTCTGATCATGTTGGAGACCAACCGAGCAGAAATATAGGTGCAATATTGAGAGCTGGAGGTGCAGACTATAATAGAGTGGTTAAGACAACTATTATGCTGGCTGATGTAGCAGACTTTGCATTAGTGAATGAAATTTATGCTCGATACTTTTCCGAGCAACCTTTTCCAGCTCGGTCAACATTTCAGGTTGGAGCGTTGCCCAAAAATGCCAAGATCGAAATCGATGCAATAGCTTTGGTTTAAACTGTAGTACCTCGACCTGACATGAGCACAGGTTGTGAAGTATCCGATATATTAGTATGGTTTCTTGCTGGTTGTTACCAACATTATTGTAATAATTTTATTATCTCATGGAC

Coding sequence (CDS)

ATGGCTTACTGCTCAGCAAACAGCTTCCAAATCCCGGCCACCAACGTCATTTCACGGCCGCGCACTGTCACTCCCTCTGTCGGCGCCTCCGTCTCCTTGTGGCGCCGCCCTTCTTCTATTCCATCTATTTCAAACCGCAACATGTCCTTCAAATGCCATGCCATTTCCAAGTGTCGTGATATCATACCTATTGAAACCAAAGAGGCTCCAGAAGCATTGGGGCCATATTCTCAAGGCATCATTGCCAACAACTTTATATTTGTGTCTGGCTCCCTAGGTCTGATTCCCGAGACAGGAGAATTAATTTCTGATCATGTTGGAGACCAACCGAGCAGAAATATAGGTGCAATATTGAGAGCTGGAGGTGCAGACTATAATAGAGTGGTTAAGACAACTATTATGCTGGCTGATGTAGCAGACTTTGCATTAGTGAATGAAATTTATGCTCGATACTTTTCCGAGCAACCTTTTCCAGCTCGGTCAACATTTCAGGTTGGAGCGTTGCCCAAAAATGCCAAGATCGAAATCGATGCAATAGCTTTGGTTTAA

Protein sequence

MAYCSANSFQIPATNVISRPRTVTPSVGASVSLWRRPSSIPSISNRNMSFKCHAISKCRDIIPIETKEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGDQPSRNIGAILRAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEQPFPARSTFQVGALPKNAKIEIDAIALV

Homology

[Close]

BLAST of CmoCh16G008960 vs. ExPASy Swiss-Prot
Match: Q94JQ4 (Reactive Intermediate Deaminase A, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RIDA PE=1 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 3.1e-37
Identity = 88/155 (56.77%), Postives = 112/155 (72.26%), Query Frame = 0


Query: 29  ASVSLWRRPSSIPSISNRNMSFKCHAISKCRDIIPIETKEAPEALGPYSQGIIANNFIFV 88
           A VSL+R  S  P  ++ ++S    A S  +++  + T++AP ALGPYSQ I ANN +F+
Sbjct: 38  AGVSLFRMSSRSPPFASLSVS----ASSVKKEV--VSTEKAPAALGPYSQAIKANNLVFL 97

Query: 89  SGSLGLIPETGELISDHVGDQPS---RNIGAILRAGGADYNRVVKTTIMLADVADFALVN 148
           SG LGLIPETG+ +S+ V DQ     +N+G IL+A GADY+ VVKTTIMLAD+ADF  VN
Sbjct: 98  SGVLGLIPETGKFVSESVEDQTEQVLKNMGEILKASGADYSSVVKTTIMLADLADFKTVN 157

Query: 149 EIYARYFSEQPFPARSTFQVGALPKNAKIEIDAIA 181
           EIYA+YF   P PARST+QV ALP NAKIEI+ IA
Sbjct: 158 EIYAKYF-PAPSPARSTYQVAALPLNAKIEIECIA 185

[Close]

BLAST of CmoCh16G008960 vs. ExPASy Swiss-Prot
Match: Q10121 (RutC family protein C23G10.2 OS=Caenorhabditis elegans OX=6239 GN=C23G10.2 PE=3 SV=3)

HSP 1 Score: 128.3 bits (321), Expect = 9.1e-29
Identity = 62/120 (51.67%), Postives = 87/120 (72.50%), Query Frame = 0


Query: 64  IETKEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGD--QPSRNIGAILRAG 123
           I +  AP A+GPYSQ + A N I++SGSLGL P+TG+L    V    Q  +N+G +L+A 
Sbjct: 44  ISSANAPGAIGPYSQAVRAGNTIYLSGSLGLDPKTGDLKEGVVEQTHQSLKNLGEVLKAA 103

Query: 124 GADYNRVVKTTIMLADVADFALVNEIYARYFSEQPFPARSTFQVGALPKNAKIEIDAIAL 182
           GADY  VVKTT++L ++ADFA VNE+Y +YF + P+PAR+ +QV ALPK   +EI+A+A+
Sbjct: 104 GADYGNVVKTTVLLQNIADFAAVNEVYGQYF-KSPYPARAAYQVAALPKGGLVEIEAVAI 162

[Close]

BLAST of CmoCh16G008960 vs. ExPASy Swiss-Prot
Match: P52758 (2-iminobutanoate/2-iminopropanoate deaminase OS=Homo sapiens OX=9606 GN=RIDA PE=1 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 2.7e-28
Identity = 59/121 (48.76%), Postives = 87/121 (71.90%), Query Frame = 0


Query: 64  IETKEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGD---QPSRNIGAILRA 123
           I T +AP A+GPYSQ ++ +  I++SG +G+ P +G+L+S  V +   Q  +N+G IL+A
Sbjct: 9   ISTAKAPGAIGPYSQAVLVDRTIYISGQIGMDPSSGQLVSGGVAEEAKQALKNMGEILKA 68

Query: 124 GGADYNRVVKTTIMLADVADFALVNEIYARYFSEQPFPARSTFQVGALPKNAKIEIDAIA 182
            G D+  VVKTT++LAD+ DF  VNEIY +YF    FPAR+ +QV ALPK ++IEI+A+A
Sbjct: 69  AGCDFTNVVKTTVLLADINDFNTVNEIYKQYFKSN-FPARAAYQVAALPKGSRIEIEAVA 128

[Close]

BLAST of CmoCh16G008960 vs. ExPASy Swiss-Prot
Match: Q3T114 (2-iminobutanoate/2-iminopropanoate deaminase OS=Bos taurus OX=9913 GN=RIDA PE=2 SV=3)

HSP 1 Score: 122.9 bits (307), Expect = 3.8e-27
Identity = 56/121 (46.28%), Postives = 86/121 (71.07%), Query Frame = 0


Query: 64  IETKEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGDQPSR---NIGAILRA 123
           I T +AP A+GPYSQ ++ +  I++SG LG+ P +G+L+   V ++  +   NIG IL+A
Sbjct: 9   ISTAKAPAAIGPYSQAVLVDRTIYISGQLGMDPASGQLVPGGVAEEAKQALTNIGEILKA 68

Query: 124 GGADYNRVVKTTIMLADVADFALVNEIYARYFSEQPFPARSTFQVGALPKNAKIEIDAIA 182
            G D+  VVK T++LAD+ DF+ VN++Y +YF +  FPAR+ +QV ALPK  ++EI+AIA
Sbjct: 69  AGCDFTNVVKATVLLADINDFSTVNDVYKQYF-QSSFPARAAYQVAALPKGGRVEIEAIA 128

[Close]

BLAST of CmoCh16G008960 vs. ExPASy Swiss-Prot
Match: P80601 (2-iminobutanoate/2-iminopropanoate deaminase OS=Capra hircus OX=9925 GN=RIDA PE=1 SV=3)

HSP 1 Score: 121.7 bits (304), Expect = 8.5e-27
Identity = 56/121 (46.28%), Postives = 86/121 (71.07%), Query Frame = 0


Query: 64  IETKEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGDQPSR---NIGAILRA 123
           I T +AP A+GPYSQ ++ +  I++SG LG+ P +G+L+   V ++  +   NIG IL+A
Sbjct: 9   ISTAKAPAAIGPYSQAVLVDRTIYISGQLGMDPASGQLVPGGVVEEAKQALTNIGEILKA 68

Query: 124 GGADYNRVVKTTIMLADVADFALVNEIYARYFSEQPFPARSTFQVGALPKNAKIEIDAIA 182
            G D+  VVK T++LAD+ DF+ VN++Y +YF +  FPAR+ +QV ALPK  ++EI+AIA
Sbjct: 69  AGCDFTNVVKATVLLADINDFSAVNDVYKQYF-QSSFPARAAYQVAALPKGGRVEIEAIA 128

[Close]

BLAST of CmoCh16G008960 vs. ExPASy TrEMBL
Match: A0A6J1EVW2 (2-iminobutanoate/2-iminopropanoate deaminase-like OS=Cucurbita moschata OX=3662 GN=LOC111438479 PE=3 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 2.9e-94
Identity = 181/185 (97.84%), Postives = 181/185 (97.84%), Query Frame = 0


Query: 1   MAYCSANSFQIPATNVISRPRTVTPSVGASVSLWRRPSSIPSISNRNMSFKCHAISKCRD 60
           MAYCSANSFQIPATNVISRPRTVTPSVGASVSLWRRPSSIPSISNRNMSFKCHAISKCRD
Sbjct: 1   MAYCSANSFQIPATNVISRPRTVTPSVGASVSLWRRPSSIPSISNRNMSFKCHAISKCRD 60

Query: 61  IIPIETKEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGDQPS---RNIGAI 120
           IIPIETKEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGDQP    RNIGAI
Sbjct: 61  IIPIETKEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGDQPRQALRNIGAI 120

Query: 121 LRAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEQPFPARSTFQVGALPKNAKIEID 180
           LRAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEQPFPARSTFQVGALPKNAKIEID
Sbjct: 121 LRAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEQPFPARSTFQVGALPKNAKIEID 180

Query: 181 AIALV 183
           AIALV
Sbjct: 181 AIALV 185

[Close]

BLAST of CmoCh16G008960 vs. ExPASy TrEMBL
Match: A0A6J1F0U9 (2-iminobutanoate/2-iminopropanoate deaminase-like OS=Cucurbita moschata OX=3662 GN=LOC111438474 PE=3 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 4.5e-87
Identity = 167/185 (90.27%), Postives = 177/185 (95.68%), Query Frame = 0


Query: 1   MAYCSANSFQIPATNVISRPRTVTPSVGASVSLWRRPSSIPSISNRNMSFKCHAISKCRD 60
           MAYC++++FQIPA+NVISRPRTVTPSVGA+VSLWRRPSSIPSISNRNMSFKCHAISKC D
Sbjct: 1   MAYCTSHTFQIPASNVISRPRTVTPSVGAAVSLWRRPSSIPSISNRNMSFKCHAISKCND 60

Query: 61  IIPIETKEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGD---QPSRNIGAI 120
           I PI T+EAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGD   Q  +NIGAI
Sbjct: 61  ITPIITEEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGDQTVQALKNIGAI 120

Query: 121 LRAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEQPFPARSTFQVGALPKNAKIEID 180
           L+AGGADYNRVVKTTIMLADVADFALVNEIYARYFSE+PFPARSTFQVGALPKNAKIEID
Sbjct: 121 LKAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEKPFPARSTFQVGALPKNAKIEID 180

Query: 181 AIALV 183
           AIALV
Sbjct: 181 AIALV 185

[Close]

BLAST of CmoCh16G008960 vs. ExPASy TrEMBL
Match: A0A6J1JD57 (2-iminobutanoate/2-iminopropanoate deaminase-like OS=Cucurbita maxima OX=3661 GN=LOC111483310 PE=3 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 1.6e-84
Identity = 163/185 (88.11%), Postives = 173/185 (93.51%), Query Frame = 0


Query: 1   MAYCSANSFQIPATNVISRPRTVTPSVGASVSLWRRPSSIPSISNRNMSFKCHAISKCRD 60
           MAYC+A++FQIPA+NVISRPRTVTPSVGA+VSLWRRPSSIPSISNRNMSFKCHAISKC D
Sbjct: 1   MAYCTAHTFQIPASNVISRPRTVTPSVGAAVSLWRRPSSIPSISNRNMSFKCHAISKCDD 60

Query: 61  IIPIETKEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGDQPS---RNIGAI 120
           I  IET EAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVG+Q     +NIGAI
Sbjct: 61  ITTIETNEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGEQAEQALKNIGAI 120

Query: 121 LRAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEQPFPARSTFQVGALPKNAKIEID 180
           L+AGGADYNRVVKTTIMLADVADFALVN+IYARYFSE P PARSTFQ GALPKNAKIEID
Sbjct: 121 LKAGGADYNRVVKTTIMLADVADFALVNQIYARYFSEYPAPARSTFQAGALPKNAKIEID 180

Query: 181 AIALV 183
           AIA+V
Sbjct: 181 AIAVV 185

[Close]

BLAST of CmoCh16G008960 vs. ExPASy TrEMBL
Match: A0RZC7 (Plastid-lipid associated protein OS=Cucumis sativus OX=3659 GN=CHRD PE=2 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 8.2e-65
Identity = 132/187 (70.59%), Postives = 155/187 (82.89%), Query Frame = 0


Query: 1   MAYCSANSFQIPATNVISRPRTVTPSVGASVSLWRRPS-SIPSISNRNMSFKCHAISKC- 60
           MA  +A++ QIPA+  I+R R++TPS G +VSLWRRPS +IPSIS+  MSFKCHAISKC 
Sbjct: 1   MAMSAAHTLQIPASTAITRRRSITPSAGTAVSLWRRPSPAIPSISSHQMSFKCHAISKCT 60

Query: 61  RDIIPIETKEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGDQPS---RNIG 120
            +II I T  APEALGPYSQGIIANN ++VSGSLGLIPETG+LISD VG+Q     +N+G
Sbjct: 61  TEIIGIATDNAPEALGPYSQGIIANNLVYVSGSLGLIPETGQLISDDVGEQTEQALKNVG 120

Query: 121 AILRAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEQPFPARSTFQVGALPKNAKIE 180
           AILRAGGADY+RV+KTTIMLA+VADF LVNEIY +YF   P PARSTF  GALPKNAKIE
Sbjct: 121 AILRAGGADYDRVIKTTIMLANVADFTLVNEIYGKYFPNSPAPARSTFAAGALPKNAKIE 180

Query: 181 IDAIALV 183
           IDAIA++
Sbjct: 181 IDAIAVL 187

[Close]

BLAST of CmoCh16G008960 vs. ExPASy TrEMBL
Match: A0A0A0L6A5 (Plastid-lipid associated protein OS=Cucumis sativus OX=3659 GN=Csa_3G076580 PE=3 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 2.4e-64
Identity = 132/187 (70.59%), Postives = 155/187 (82.89%), Query Frame = 0


Query: 1   MAYCSANSFQIPATNVISRPRTVTPSVGASVSLWRRPS-SIPSISNRNMSFKCHAISKC- 60
           MA  +A++ QIPA+  I+R R++TPS   +VSLWRRPS +IPSIS+R MSFKCHAISKC 
Sbjct: 1   MAMSAAHTLQIPASTAITRRRSITPSASTAVSLWRRPSPAIPSISSRQMSFKCHAISKCT 60

Query: 61  RDIIPIETKEAPEALGPYSQGIIANNFIFVSGSLGLIPETGELISDHVGDQPS---RNIG 120
            +II I T  APEALGPYSQGIIANN ++VSGSLGLIPETG+LISD VG+Q     +N+G
Sbjct: 61  TEIIGIATDNAPEALGPYSQGIIANNLVYVSGSLGLIPETGQLISDDVGEQTEQALKNVG 120

Query: 121 AILRAGGADYNRVVKTTIMLADVADFALVNEIYARYFSEQPFPARSTFQVGALPKNAKIE 180
           AILRAGGADY+RV+KTTIMLA+VADF LVNEIY +YF   P PARSTF  GALPKNAKIE
Sbjct: 121 AILRAGGADYDRVIKTTIMLANVADFTLVNEIYGKYFPNCPAPARSTFAAGALPKNAKIE 180

Query: 181 IDAIALV 183
           IDAIA++
Sbjct: 181 IDAIAVL 187

[Close]

BLAST of CmoCh16G008960 vs. TAIR 10
Match: AT3G20390.1 (endoribonuclease L-PSP family protein )

HSP 1 Score: 156.4 bits (394), Expect = 2.2e-38
Identity = 88/155 (56.77%), Postives = 112/155 (72.26%), Query Frame = 0


Query: 29  ASVSLWRRPSSIPSISNRNMSFKCHAISKCRDIIPIETKEAPEALGPYSQGIIANNFIFV 88
           A VSL+R  S  P  ++ ++S    A S  +++  + T++AP ALGPYSQ I ANN +F+
Sbjct: 38  AGVSLFRMSSRSPPFASLSVS----ASSVKKEV--VSTEKAPAALGPYSQAIKANNLVFL 97

Query: 89  SGSLGLIPETGELISDHVGDQPS---RNIGAILRAGGADYNRVVKTTIMLADVADFALVN 148
           SG LGLIPETG+ +S+ V DQ     +N+G IL+A GADY+ VVKTTIMLAD+ADF  VN
Sbjct: 98  SGVLGLIPETGKFVSESVEDQTEQVLKNMGEILKASGADYSSVVKTTIMLADLADFKTVN 157

Query: 149 EIYARYFSEQPFPARSTFQVGALPKNAKIEIDAIA 181
           EIYA+YF   P PARST+QV ALP NAKIEI+ IA
Sbjct: 158 EIYAKYF-PAPSPARSTYQVAALPLNAKIEIECIA 185

The following BLAST results are available for this feature:

BLAST of CmoCh16G008960 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94JQ4	3.1e-37	56.77	Reactive Intermediate Deaminase A, chloroplastic OS=Arabidopsis thaliana OX=3702...	[more]
Q10121	9.1e-29	51.67	RutC family protein C23G10.2 OS=Caenorhabditis elegans OX=6239 GN=C23G10.2 PE=3 ...	[more]
P52758	2.7e-28	48.76	2-iminobutanoate/2-iminopropanoate deaminase OS=Homo sapiens OX=9606 GN=RIDA PE=...	[more]
Q3T114	3.8e-27	46.28	2-iminobutanoate/2-iminopropanoate deaminase OS=Bos taurus OX=9913 GN=RIDA PE=2 ...	[more]
P80601	8.5e-27	46.28	2-iminobutanoate/2-iminopropanoate deaminase OS=Capra hircus OX=9925 GN=RIDA PE=...	[more]

BLAST of CmoCh16G008960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EVW2	2.9e-94	97.84	2-iminobutanoate/2-iminopropanoate deaminase-like OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1F0U9	4.5e-87	90.27	2-iminobutanoate/2-iminopropanoate deaminase-like OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1JD57	1.6e-84	88.11	2-iminobutanoate/2-iminopropanoate deaminase-like OS=Cucurbita maxima OX=3661 GN...	[more]
A0RZC7	8.2e-65	70.59	Plastid-lipid associated protein OS=Cucumis sativus OX=3659 GN=CHRD PE=2 SV=1	[more]
A0A0A0L6A5	2.4e-64	70.59	Plastid-lipid associated protein OS=Cucumis sativus OX=3659 GN=Csa_3G076580 PE=3...	[more]

BLAST of CmoCh16G008960 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G20390.1	2.2e-38	56.77	endoribonuclease L-PSP family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006175	YjgF/YER057c/UK114 family	PFAM	PF01042	Ribonuc_L-PSP	coord: 67..181 e-value: 1.9E-33 score: 115.1
IPR006175	YjgF/YER057c/UK114 family	PANTHER	PTHR11803	2-IMINOBUTANOATE/2-IMINOPROPANOATE DEAMINASE RIDA	coord: 1..181
IPR035959	RutC-like superfamily	GENE3D	3.30.1330.40		coord: 62..182 e-value: 1.5E-37 score: 130.5
IPR035959	RutC-like superfamily	SUPERFAMILY	55298	YjgF-like	coord: 62..182
IPR006056	RidA family	TIGRFAM	TIGR00004	TIGR00004	coord: 63..181 e-value: 5.4E-42 score: 140.9
None	No IPR available	PANTHER	PTHR11803:SF45	PERCHLORIC ACID SOLUBLE TRANSLATION INHIBITOR-LIKE PROTEIN	coord: 1..181
None	No IPR available	CDD	cd00448	YjgF_YER057c_UK114_family	coord: 76..180 e-value: 1.0173E-38 score: 126.519
IPR019897	RidA, conserved site	PROSITE	PS01094	UPF0076	coord: 158..176

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh16G008960.1	CmoCh16G008960.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1901565	organonitrogen compound catabolic process
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0019239	deaminase activity