CmoCh16G008840 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh16G008840
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	LOW QUALITY PROTEIN: (+)-gamma-cadinene synthase-like
Location	Cmo_Chr16: 4802118 .. 4802631 (+)
RNA-Seq Expression	CmoCh16G008840
Synteny	CmoCh16G008840

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTATACCCTGTTTATAAGCATTTCACTACTTGGCATGGACAACATGGTAACCAATGAGGTACTTCAATGGGTTTCTAGAAGACCTAAAATTATTAAAGCCTCAACAATCGTTTGTAAACTCATGGACGATGTCGTTTCCCACAAGGTTTACTATCATTCAAAAGCAATACTAACAAAATTTAACTTTTTAAAACTTTTTAAAAGTAAACTATATTTACTTATATGTTTTTCTTTTTTAGGTTGAGCAAGAAAGGGAACATGTTGCTTCTGGGTCGAATATTACATGGCAATATAGTTGATCAGAGCAAGAAGGTTGTGTTAAACTTCATAAGCAAGTGGTTGATGCATGGAAGGACGTAAATGAAACATGTCTTCATCTAATTGCTGTTCCAATGCCCATTTTAATGCGGGCAATAATATTTTCAAGAGTTATTAACATACTTTATTCGGACGAGGATGGATATACACATTCAAATAGCAGAGCAAAATTTATTATCGAATCTTTTCTG

mRNA sequence

ATGGGTTATACCCTGTTTATAAGCATTTCACTACTTGGCATGGACAACATGGTAACCAATGAGGTACTTCAATGGGTTTCTAGAAGACCTAAAATTATTAAAGCCTCAACAATCGTTTGTAAACTCATGGACGATGTCGTTTCCCACAAGGTTGAGCAAGAAAGGGAACATGTTGCTTCTGGGTCGAATATTACATGGCAATATAAGCAAGAAGGTTGTGTTAAACTTCATAAGCAAGTGGTTGATGCATGGAAGGACGTAAATGAAACATGTCTTCATCTAATTGCTGTTCCAATGCCCATTTTAATGCGGGCAATAATATTTTCAAGAGTTATTAACATACTTTATTCGGACGAGGATGGATATACACATTCAAATAGCAGAGCAAAATTTATTATCGAATCTTTTCTG

Coding sequence (CDS)

ATGGGTTATACCCTGTTTATAAGCATTTCACTACTTGGCATGGACAACATGGTAACCAATGAGGTACTTCAATGGGTTTCTAGAAGACCTAAAATTATTAAAGCCTCAACAATCGTTTGTAAACTCATGGACGATGTCGTTTCCCACAAGGTTGAGCAAGAAAGGGAACATGTTGCTTCTGGGTCGAATATTACATGGCAATATAAGCAAGAAGGTTGTGTTAAACTTCATAAGCAAGTGGTTGATGCATGGAAGGACGTAAATGAAACATGTCTTCATCTAATTGCTGTTCCAATGCCCATTTTAATGCGGGCAATAATATTTTCAAGAGTTATTAACATACTTTATTCGGACGAGGATGGATATACACATTCAAATAGCAGAGCAAAATTTATTATCGAATCTTTTCTG

Protein sequence

MGYTLFISISLLGMDNMVTNEVLQWVSRRPKIIKASTIVCKLMDDVVSHKVEQEREHVASGSNITWQYKQEGCVKLHKQVVDAWKDVNETCLHLIAVPMPILMRAIIFSRVINILYSDEDGYTHSNSRAKFIIESFL

Homology

[Close]

BLAST of CmoCh16G008840 vs. ExPASy Swiss-Prot
Match: B2KSJ5 ((+)-gamma-cadinene synthase OS=Cucumis melo OX=3656 PE=1 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 1.6e-41
Identity = 86/141 (60.99%), Postives = 108/141 (76.60%), Query Frame = 0


Query: 2   GYTLFISISLLGM-DNMVTNEVLQWVSRRPKIIKASTIVCKLMDDVVSHKVEQEREHVAS 61
           GYT+ ISIS LG+ D++VTNEVLQW+S  P+IIKASTI+C+LMDD+ SHK EQEREHVAS
Sbjct: 425 GYTMLISISFLGLGDHIVTNEVLQWLSNGPQIIKASTIICRLMDDIASHKFEQEREHVAS 484

Query: 62  GSNITW-QY---KQEGCVKLHKQVVDAWKDVNETCLHLIAVPMPILMRAIIFSRVINILY 121
                  QY   ++E C++LHK+VVDAWKD NE       VP+P+LMR + FSRVIN+LY
Sbjct: 485 AVECYMKQYDCSEEEACIELHKEVVDAWKDTNEAFYRPFNVPVPVLMRVLNFSRVINLLY 544

Query: 122 SDEDGYTHSNSRAKFIIESFL 138
            DEDGYT++ S  KF+I+S L
Sbjct: 545 LDEDGYTNAKSGTKFLIKSLL 565

[Close]

BLAST of CmoCh16G008840 vs. ExPASy Swiss-Prot
Match: B5A435 (Sesquiterpene synthase OS=Santalum album OX=35974 PE=1 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 5.8e-28
Identity = 66/140 (47.14%), Postives = 86/140 (61.43%), Query Frame = 0


Query: 2   GYTLFISISLLGMDNMVTNEVLQWVSRRPKIIKASTIVCKLMDDVVSHKVEQEREHVASG 61
           GYT   +IS LGM  + + E   W+   P +I+AS  VC+LMDD+ SHK EQER HVASG
Sbjct: 414 GYTFLTTISYLGMGEIASKEAFDWLFSHPPVIEASESVCRLMDDMRSHKFEQERGHVASG 473

Query: 62  SNITW-QY---KQEGCVKLHKQVVDAWKDVNETCLHLIAVPMPILMRAIIFSRVINILYS 121
                 QY   ++E   +  KQ+V AWKD+NE CL    VP P+LMR +  +RVI+++Y 
Sbjct: 474 IECYMKQYGVTEEEAHDEFRKQLVKAWKDINEECLRPYRVPKPLLMRILNLTRVIDVIYK 533

Query: 122 DEDGYTHSNSRAKFIIESFL 138
           +EDGYTH     K  I S L
Sbjct: 534 NEDGYTHVKKAMKDNIASLL 553

[Close]

BLAST of CmoCh16G008840 vs. ExPASy Swiss-Prot
Match: F6M8H6 (Probable sesquiterpene synthase OS=Santalum spicatum OX=453088 GN=SesquiTPS PE=3 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 9.9e-28
Identity = 66/140 (47.14%), Postives = 87/140 (62.14%), Query Frame = 0


Query: 2   GYTLFISISLLGMDNMVTNEVLQWVSRRPKIIKASTIVCKLMDDVVSHKVEQEREHVASG 61
           GYT   +IS LGM  + + E   W+  RP II+AS  VC+LMDD+ SH+ EQER HVASG
Sbjct: 417 GYTFLTTISYLGMGEIASKEAFDWLFSRPPIIEASESVCRLMDDMRSHEFEQERGHVASG 476

Query: 62  SNITW-QY---KQEGCVKLHKQVVDAWKDVNETCLHLIAVPMPILMRAIIFSRVINILYS 121
                 QY   ++E   K HK++V AWKD+NE CL    +P P+LMR +  +RVI+++Y 
Sbjct: 477 IECYMKQYGVTEEEAHDKFHKRLVKAWKDINEGCLRPYPMPKPLLMRILSLTRVIDVIYK 536

Query: 122 DEDGYTHSNSRAKFIIESFL 138
           +ED YTH     K  I S L
Sbjct: 537 NEDWYTHVKKPMKDKIASLL 556

[Close]

BLAST of CmoCh16G008840 vs. ExPASy Swiss-Prot
Match: Q6Q3H3 ((-)-germacrene D synthase OS=Vitis vinifera OX=29760 GN=VIT_19s0014g04930 PE=1 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 1.3e-27
Identity = 63/139 (45.32%), Postives = 89/139 (64.03%), Query Frame = 0


Query: 3   YTLFISISLLGMDNMVTNEVLQWVSRRPKIIKASTIVCKLMDDVVSHKVEQEREHVASGS 62
           Y++  + S +GM + VT E   W+  +PKI++AS IVC+LMDD+V HK EQ+R HVAS  
Sbjct: 413 YSMLATTSFVGMGDAVTKESFDWIFSKPKIVRASAIVCRLMDDMVFHKFEQKRGHVASAV 472

Query: 63  NITWQY----KQEGCVKLHKQVVDAWKDVNETCLHLIAVPMPILMRAIIFSRVINILYSD 122
               +     +QE   +  + V +AWKD+NE CL   AVPMPILMR +  +RVI+++Y +
Sbjct: 473 ECYMKQHGASEQETPNEFPQPVREAWKDINEECLIPTAVPMPILMRVLNLARVIDVIYKN 532

Query: 123 EDGYTHSNSRAKFIIESFL 138
           EDGYTH  +  K  + S L
Sbjct: 533 EDGYTHFGAVLKDFVTSML 551

[Close]

BLAST of CmoCh16G008840 vs. ExPASy Swiss-Prot
Match: B9S9Z3 (Alpha-copaene synthase OS=Ricinus communis OX=3988 GN=TPS1 PE=1 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 3.8e-27
Identity = 59/127 (46.46%), Postives = 86/127 (67.72%), Query Frame = 0


Query: 10  SLLGMDNMVTNEVLQWVSRRPKIIKASTIVCKLMDDVVSHKVEQEREHVASGSNI---TW 69
           S LG+  + T E  +W S  PKII+AS+IVC+LMDD+VSH+ EQ R+HVASG       +
Sbjct: 422 SFLGLKEIATKEAYEWASEDPKIIRASSIVCRLMDDIVSHEFEQTRKHVASGVECYIKQY 481

Query: 70  QYKQEGCVKL-HKQVVDAWKDVNETCLHLIAVPMPILMRAIIFSRVINILYSDEDGYTHS 129
              +E  +KL  K+V +AWKD+NE CL+   VPMP+L R +  +R I+++Y D+DGYT+S
Sbjct: 482 GASEEEVIKLFRKEVTNAWKDLNEECLNPTPVPMPMLERVVNLTRAIDVIYKDDDGYTNS 541

Query: 130 NSRAKFI 133
           +    ++
Sbjct: 542 HIMKDYV 548

[Close]

BLAST of CmoCh16G008840 vs. ExPASy TrEMBL
Match: A0A6J1EZA9 (LOW QUALITY PROTEIN: (+)-gamma-cadinene synthase-like OS=Cucurbita moschata OX=3662 GN=LOC111440345 PE=4 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 5.6e-50
Identity = 103/140 (73.57%), Postives = 118/140 (84.29%), Query Frame = 0


Query: 2   GYTLFISISLLGMDNMVTNEVLQWVSRRPKIIKASTIVCKLMDDVVSHKVEQEREHVASG 61
           GY+L ISISLLGM NMVTN+VLQWVSRRPKIIK STI+C+LMDD+VSHK EQER+HVAS 
Sbjct: 416 GYSLLISISLLGMGNMVTNDVLQWVSRRPKIIKGSTIICRLMDDIVSHKFEQERKHVASA 475

Query: 62  SN-ITWQY---KQEGCVKLHKQVVDAWKDVNETCLHLIAVPMPILMRAIIFSRVINILYS 121
                 QY   ++E CV+LHKQVVDAWKDVNE CLH I VPMPILMRA+ FSRV+N++YS
Sbjct: 476 VECYIEQYGCXEEEACVELHKQVVDAWKDVNEACLHPITVPMPILMRAVNFSRVMNVIYS 535

Query: 122 DEDGYTHSNSRAKFIIESFL 138
           DEDGYT+SN + KFIIES L
Sbjct: 536 DEDGYTNSNGKTKFIIESLL 555

[Close]

BLAST of CmoCh16G008840 vs. ExPASy TrEMBL
Match: A0A6J1JCH1 (LOW QUALITY PROTEIN: (+)-gamma-cadinene synthase-like OS=Cucurbita maxima OX=3661 GN=LOC111483232 PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 2.1e-49
Identity = 102/140 (72.86%), Postives = 117/140 (83.57%), Query Frame = 0


Query: 2   GYTLFISISLLGMDNMVTNEVLQWVSRRPKIIKASTIVCKLMDDVVSHKVEQEREHVASG 61
           GY+L ISISLLGM NMVTN+VLQWVSRRPKIIK STI+C+LMDD+VSHK EQEREH+AS 
Sbjct: 421 GYSLLISISLLGMGNMVTNDVLQWVSRRPKIIKGSTIICRLMDDIVSHKFEQEREHIASA 480

Query: 62  SN-ITWQY---KQEGCVKLHKQVVDAWKDVNETCLHLIAVPMPILMRAIIFSRVINILYS 121
                 QY   ++E CV+LHKQVVDAWKDVNE CL  IAVPMPILMR + FSRV+N++YS
Sbjct: 481 VECYIEQYGCSEEEACVELHKQVVDAWKDVNEACLRPIAVPMPILMRTVNFSRVMNVIYS 540

Query: 122 DEDGYTHSNSRAKFIIESFL 138
           DEDGYT+SN + KFIIES L
Sbjct: 541 DEDGYTNSNGKTKFIIESLL 560

[Close]

BLAST of CmoCh16G008840 vs. ExPASy TrEMBL
Match: A0A6J1EW93 ((+)-gamma-cadinene synthase-like OS=Cucurbita moschata OX=3662 GN=LOC111438481 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 5.1e-43
Identity = 91/140 (65.00%), Postives = 109/140 (77.86%), Query Frame = 0


Query: 2   GYTLFISISLLGMDNMVTNEVLQWVSRRPKIIKASTIVCKLMDDVVSHKVEQEREHVASG 61
           GYT  ISIS LGM ++VTNEVL+W+SRRPKI+KAS ++C+LMDDVVSHK EQEREHV S 
Sbjct: 417 GYTFIISISFLGMGDIVTNEVLEWLSRRPKIVKASAVICRLMDDVVSHKFEQEREHVTSA 476

Query: 62  SNITW-QY---KQEGCVKLHKQVVDAWKDVNETCLHLIAVPMPILMRAIIFSRVINILYS 121
                 QY   ++E CV+LHKQVVDAWKD+NE CL+ I VPM ILMR +  SRVIN+LY 
Sbjct: 477 VECYMEQYGCSEEEACVELHKQVVDAWKDINEACLYPIDVPMRILMRVVNLSRVINVLYL 536

Query: 122 DEDGYTHSNSRAKFIIESFL 138
           DEDGYT+ + R K +IES L
Sbjct: 537 DEDGYTNGSGRTKLLIESLL 556

[Close]

BLAST of CmoCh16G008840 vs. ExPASy TrEMBL
Match: A0A6J1JAP8 ((+)-gamma-cadinene synthase-like OS=Cucurbita maxima OX=3661 GN=LOC111483273 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 6.6e-43
Identity = 88/140 (62.86%), Postives = 113/140 (80.71%), Query Frame = 0


Query: 2   GYTLFISISLLGMDNMVTNEVLQWVSRRPKIIKASTIVCKLMDDVVSHKVEQEREHVASG 61
           GY+L ISISL+GM ++VTN+V++W  +RPK++KA+TI+ +LMDD+VSHK EQ+REHVAS 
Sbjct: 417 GYSLVISISLIGMGDIVTNKVIEWFFKRPKVVKAATIIARLMDDLVSHKFEQQREHVASA 476

Query: 62  SNITW-QY---KQEGCVKLHKQVVDAWKDVNETCLHLIAVPMPILMRAIIFSRVINILYS 121
                 QY   + E C++LHKQVVDAWKD+NE CLH I VPMPILMR +  SRVIN+LY+
Sbjct: 477 VECYMEQYGCSENEACIELHKQVVDAWKDINEACLHPIDVPMPILMRIVNVSRVINLLYT 536

Query: 122 DEDGYTHSNSRAKFIIESFL 138
           DEDGYT++N R KF+IES L
Sbjct: 537 DEDGYTNANGRTKFLIESLL 556

[Close]

BLAST of CmoCh16G008840 vs. ExPASy TrEMBL
Match: A0A6J1J7F9 ((+)-gamma-cadinene synthase-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111483269 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.9e-42
Identity = 88/140 (62.86%), Postives = 111/140 (79.29%), Query Frame = 0


Query: 2   GYTLFISISLLGMDNMVTNEVLQWVSRRPKIIKASTIVCKLMDDVVSHKVEQEREHVASG 61
           GY   IS++L+GM ++VTN++L+W  R+PKII ASTI+C+LMDD+VS K EQEREHV SG
Sbjct: 417 GYFSIISVALIGMGDIVTNKILEWFFRKPKIINASTIICRLMDDIVSGKFEQEREHVTSG 476

Query: 62  SN-ITWQY---KQEGCVKLHKQVVDAWKDVNETCLHLIAVPMPILMRAIIFSRVINILYS 121
                 QY   ++E C++LHKQVVDAWKD+NE CLH I VPMPILMR +  SRVIN+LY+
Sbjct: 477 VECYKEQYGCSEEEACIELHKQVVDAWKDINEACLHPIDVPMPILMRIVNVSRVINLLYT 536

Query: 122 DEDGYTHSNSRAKFIIESFL 138
           DEDGYT++N R KF+IES L
Sbjct: 537 DEDGYTNANGRTKFLIESLL 556

[Close]

BLAST of CmoCh16G008840 vs. NCBI nr
Match: XP_022933272.1 (LOW QUALITY PROTEIN: (+)-gamma-cadinene synthase-like [Cucurbita moschata])

HSP 1 Score: 206.8 bits (525), Expect = 1.2e-49
Identity = 103/140 (73.57%), Postives = 118/140 (84.29%), Query Frame = 0


Query: 2   GYTLFISISLLGMDNMVTNEVLQWVSRRPKIIKASTIVCKLMDDVVSHKVEQEREHVASG 61
           GY+L ISISLLGM NMVTN+VLQWVSRRPKIIK STI+C+LMDD+VSHK EQER+HVAS 
Sbjct: 416 GYSLLISISLLGMGNMVTNDVLQWVSRRPKIIKGSTIICRLMDDIVSHKFEQERKHVASA 475

Query: 62  SN-ITWQY---KQEGCVKLHKQVVDAWKDVNETCLHLIAVPMPILMRAIIFSRVINILYS 121
                 QY   ++E CV+LHKQVVDAWKDVNE CLH I VPMPILMRA+ FSRV+N++YS
Sbjct: 476 VECYIEQYGCXEEEACVELHKQVVDAWKDVNEACLHPITVPMPILMRAVNFSRVMNVIYS 535

Query: 122 DEDGYTHSNSRAKFIIESFL 138
           DEDGYT+SN + KFIIES L
Sbjct: 536 DEDGYTNSNGKTKFIIESLL 555

[Close]

BLAST of CmoCh16G008840 vs. NCBI nr
Match: XP_022985144.1 (LOW QUALITY PROTEIN: (+)-gamma-cadinene synthase-like [Cucurbita maxima])

HSP 1 Score: 204.9 bits (520), Expect = 4.4e-49
Identity = 102/140 (72.86%), Postives = 117/140 (83.57%), Query Frame = 0


Query: 2   GYTLFISISLLGMDNMVTNEVLQWVSRRPKIIKASTIVCKLMDDVVSHKVEQEREHVASG 61
           GY+L ISISLLGM NMVTN+VLQWVSRRPKIIK STI+C+LMDD+VSHK EQEREH+AS 
Sbjct: 421 GYSLLISISLLGMGNMVTNDVLQWVSRRPKIIKGSTIICRLMDDIVSHKFEQEREHIASA 480

Query: 62  SN-ITWQY---KQEGCVKLHKQVVDAWKDVNETCLHLIAVPMPILMRAIIFSRVINILYS 121
                 QY   ++E CV+LHKQVVDAWKDVNE CL  IAVPMPILMR + FSRV+N++YS
Sbjct: 481 VECYIEQYGCSEEEACVELHKQVVDAWKDVNEACLRPIAVPMPILMRTVNFSRVMNVIYS 540

Query: 122 DEDGYTHSNSRAKFIIESFL 138
           DEDGYT+SN + KFIIES L
Sbjct: 541 DEDGYTNSNGKTKFIIESLL 560

[Close]

BLAST of CmoCh16G008840 vs. NCBI nr
Match: XP_023552098.1 ((+)-gamma-cadinene synthase-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 203.4 bits (516), Expect = 1.3e-48
Identity = 102/140 (72.86%), Postives = 117/140 (83.57%), Query Frame = 0


Query: 2   GYTLFISISLLGMDNMVTNEVLQWVSRRPKIIKASTIVCKLMDDVVSHKVEQEREHVASG 61
           GY+L ISISLL M NMVTN+VLQWVSRRPKII+ STI+C+LMDD+VSHK EQEREHVAS 
Sbjct: 417 GYSLLISISLLVMGNMVTNDVLQWVSRRPKIIEGSTIICRLMDDIVSHKFEQEREHVASA 476

Query: 62  SN-ITWQY---KQEGCVKLHKQVVDAWKDVNETCLHLIAVPMPILMRAIIFSRVINILYS 121
                 QY   ++E CV+LHKQVVDAWKDVNE CLH IAVPMPILMR + FSRV+N++YS
Sbjct: 477 VECYIEQYGCSEEEACVELHKQVVDAWKDVNEACLHPIAVPMPILMRTVNFSRVMNVIYS 536

Query: 122 DEDGYTHSNSRAKFIIESFL 138
           DEDGYT+SN + KFIIES L
Sbjct: 537 DEDGYTNSNGKTKFIIESLL 556

[Close]

BLAST of CmoCh16G008840 vs. NCBI nr
Match: XP_022932164.1 ((+)-gamma-cadinene synthase-like [Cucurbita moschata])

HSP 1 Score: 183.7 bits (465), Expect = 1.1e-42
Identity = 91/140 (65.00%), Postives = 109/140 (77.86%), Query Frame = 0


Query: 2   GYTLFISISLLGMDNMVTNEVLQWVSRRPKIIKASTIVCKLMDDVVSHKVEQEREHVASG 61
           GYT  ISIS LGM ++VTNEVL+W+SRRPKI+KAS ++C+LMDDVVSHK EQEREHV S 
Sbjct: 417 GYTFIISISFLGMGDIVTNEVLEWLSRRPKIVKASAVICRLMDDVVSHKFEQEREHVTSA 476

Query: 62  SNITW-QY---KQEGCVKLHKQVVDAWKDVNETCLHLIAVPMPILMRAIIFSRVINILYS 121
                 QY   ++E CV+LHKQVVDAWKD+NE CL+ I VPM ILMR +  SRVIN+LY 
Sbjct: 477 VECYMEQYGCSEEEACVELHKQVVDAWKDINEACLYPIDVPMRILMRVVNLSRVINVLYL 536

Query: 122 DEDGYTHSNSRAKFIIESFL 138
           DEDGYT+ + R K +IES L
Sbjct: 537 DEDGYTNGSGRTKLLIESLL 556

[Close]

BLAST of CmoCh16G008840 vs. NCBI nr
Match: XP_023520451.1 (LOW QUALITY PROTEIN: (+)-gamma-cadinene synthase-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 183.3 bits (464), Expect = 1.4e-42
Identity = 91/140 (65.00%), Postives = 109/140 (77.86%), Query Frame = 0


Query: 2   GYTLFISISLLGMDNMVTNEVLQWVSRRPKIIKASTIVCKLMDDVVSHKVEQEREHVASG 61
           GYT  ISIS LGM ++VTNEVL+W+SRRPKI+KAS ++C+LMDDVVSHK EQEREHV S 
Sbjct: 417 GYTFIISISFLGMGDIVTNEVLEWLSRRPKIVKASAVICRLMDDVVSHKFEQEREHVTSA 476

Query: 62  SNITW-QY---KQEGCVKLHKQVVDAWKDVNETCLHLIAVPMPILMRAIIFSRVINILYS 121
                 QY   ++E CV+LHKQVVDAWKD+NE CL+ I VPM ILMR +  SRVIN+LY 
Sbjct: 477 VECYMEQYGCSEKEACVELHKQVVDAWKDINEACLYPIDVPMRILMRVVNLSRVINVLYL 536

Query: 122 DEDGYTHSNSRAKFIIESFL 138
           DEDGYT+ + R K +IES L
Sbjct: 537 DEDGYTNGSGRTKLLIESLL 556

[Close]

BLAST of CmoCh16G008840 vs. TAIR 10
Match: AT5G23960.1 (terpene synthase 21 )

HSP 1 Score: 86.7 bits (213), Expect = 1.6e-17
Identity = 46/136 (33.82%), Postives = 78/136 (57.35%), Query Frame = 0


Query: 2   GYTLFISISLLGMDNMVTNEVLQWVSRRPKIIKASTIVCKLMDDVVSHKVEQEREHVASG 61
           GY   I+++ + M ++   +  +W+S  PKI  AS I+ +  DD+ S++ E +REHVA+G
Sbjct: 403 GYYALIAMTFVRMTDVAKLDAFEWLSSHPKIRVASEIISRFTDDISSYEFEHKREHVATG 462

Query: 62  SNITWQ---YKQEGCVKLHKQVV-DAWKDVNETCLHLIAVPMPILMRAIIFSRVINILYS 121
            +   Q     +E  V++   +V DAWKD+N+  +     P P+LMR +  SRVI++ Y 
Sbjct: 463 IDCYMQQFGVSKERAVEVMGNIVSDAWKDLNQELMRPHVFPFPLLMRVLNLSRVIDVFYR 522

Query: 122 DEDGYTHSNSRAKFII 134
            +D YT+     + I+
Sbjct: 523 YQDAYTNPKLLKEHIV 538

[Close]

BLAST of CmoCh16G008840 vs. TAIR 10
Match: AT5G23960.2 (terpene synthase 21 )

HSP 1 Score: 86.7 bits (213), Expect = 1.6e-17
Identity = 46/136 (33.82%), Postives = 78/136 (57.35%), Query Frame = 0


Query: 2   GYTLFISISLLGMDNMVTNEVLQWVSRRPKIIKASTIVCKLMDDVVSHKVEQEREHVASG 61
           GY   I+++ + M ++   +  +W+S  PKI  AS I+ +  DD+ S++ E +REHVA+G
Sbjct: 401 GYYALIAMTFVRMTDVAKLDAFEWLSSHPKIRVASEIISRFTDDISSYEFEHKREHVATG 460

Query: 62  SNITWQ---YKQEGCVKLHKQVV-DAWKDVNETCLHLIAVPMPILMRAIIFSRVINILYS 121
            +   Q     +E  V++   +V DAWKD+N+  +     P P+LMR +  SRVI++ Y 
Sbjct: 461 IDCYMQQFGVSKERAVEVMGNIVSDAWKDLNQELMRPHVFPFPLLMRVLNLSRVIDVFYR 520

Query: 122 DEDGYTHSNSRAKFII 134
            +D YT+     + I+
Sbjct: 521 YQDAYTNPKLLKEHIV 536

[Close]

BLAST of CmoCh16G008840 vs. TAIR 10
Match: AT1G48800.1 (Terpenoid cyclases/Protein prenyltransferases superfamily protein )

HSP 1 Score: 73.2 bits (178), Expect = 1.9e-13
Identity = 45/129 (34.88%), Postives = 69/129 (53.49%), Query Frame = 0


Query: 11  LLGMDNMVTNEVLQWVSRRPKIIKASTIVCKLMDDVVSHKVEQEREHVASGSN-ITWQY- 70
           LLGM+N+   E  +W+  R K+++A +   +L++D+  +K +  R +V +  N    QY 
Sbjct: 470 LLGMENINKKEAYEWLIFRDKLVRAMSTKARLVNDLFGYKDDMRRGYVTNSINCYKKQYG 529

Query: 71  --KQEGCVKLHKQVVDAWKDVNETCLHLIAVPMPILMRAIIFSRVINILYSDEDGYTHSN 130
             ++E   KLH+ V D  K +NE  L  I VP  +L   +   R INI Y +EDG+T  N
Sbjct: 530 VTEEEAFRKLHQMVADGDKMMNEEFLKPINVPHQVLKAVLDTLRAINICYDNEDGFTRLN 589

Query: 131 SRAKFIIES 136
              K  I S
Sbjct: 590 GNLKNYITS 598

[Close]

BLAST of CmoCh16G008840 vs. TAIR 10
Match: AT5G44630.1 (Terpenoid cyclases/Protein prenyltransferases superfamily protein )

HSP 1 Score: 72.8 bits (177), Expect = 2.4e-13
Identity = 37/128 (28.91%), Postives = 69/128 (53.91%), Query Frame = 0


Query: 7   ISISLLGMDNMVTNEVLQWVSRRPKIIKASTIVCKLMDDVVSHKVEQEREHVASGSNITW 66
           I+ S++G+  +   E  +W+  RPK+++      +LMDD+   + + E+ + A+  N   
Sbjct: 417 IACSIMGLGEIGKKEAFEWLISRPKLVRILGAKTRLMDDIADFEEDMEKGYTANALNYYM 476

Query: 67  Q----YKQEGCVKLHKQVVDAWKDVNETCLHLIAVPMPILMRAIIFSRVINILYSDEDGY 126
                 K+E   +L K   D  K VNE CL +  +P  ILM+++ ++R +++LY+ +D Y
Sbjct: 477 NEHGVTKEEASRELEKMNGDMNKIVNEECLKITTMPRRILMQSVNYARSLDVLYTADDVY 536

Query: 127 THSNSRAK 131
            H   + K
Sbjct: 537 NHREGKLK 544

[Close]

BLAST of CmoCh16G008840 vs. TAIR 10
Match: AT4G13300.1 (terpenoid synthase 13 )

HSP 1 Score: 67.8 bits (164), Expect = 7.8e-12
Identity = 42/133 (31.58%), Postives = 66/133 (49.62%), Query Frame = 0


Query: 10  SLLGMDNMVTNEVLQWVSRRPKIIKASTIVCKLMDDVVSHKVEQEREHVASGSNITWQY- 69
           S +GM   V  E  +WV  RP++IK+     +LMDD+   + +      A+  N   +  
Sbjct: 416 SFVGMGEAVGKEAYEWVRSRPRLIKSLAAKGRLMDDITDFESDMSNGFAANAINYYMKQF 475

Query: 70  ---KQEGCVKLHKQVVDAWKDVNETCLHLIAVPMPILMRAIIFSRVINILYS-DEDGYTH 129
              K+E  ++  K VVD  K VNE  L    VP  +L +A+ F R++ +LY+  +D Y  
Sbjct: 476 VVTKEEAILECQKMVVDINKIVNEELLKTTTVPRRVLKQALNFGRLLEVLYTKSDDIYNC 535

Query: 130 SNSRAKFIIESFL 138
           S  + K  I + L
Sbjct: 536 SEGKLKEYIVTLL 548

The following BLAST results are available for this feature:

BLAST of CmoCh16G008840 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B2KSJ5	1.6e-41	60.99	(+)-gamma-cadinene synthase OS=Cucumis melo OX=3656 PE=1 SV=1	[more]
B5A435	5.8e-28	47.14	Sesquiterpene synthase OS=Santalum album OX=35974 PE=1 SV=1	[more]
F6M8H6	9.9e-28	47.14	Probable sesquiterpene synthase OS=Santalum spicatum OX=453088 GN=SesquiTPS PE=3...	[more]
Q6Q3H3	1.3e-27	45.32	(-)-germacrene D synthase OS=Vitis vinifera OX=29760 GN=VIT_19s0014g04930 PE=1 S...	[more]
B9S9Z3	3.8e-27	46.46	Alpha-copaene synthase OS=Ricinus communis OX=3988 GN=TPS1 PE=1 SV=1	[more]

BLAST of CmoCh16G008840 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EZA9	5.6e-50	73.57	LOW QUALITY PROTEIN: (+)-gamma-cadinene synthase-like OS=Cucurbita moschata OX=3...	[more]
A0A6J1JCH1	2.1e-49	72.86	LOW QUALITY PROTEIN: (+)-gamma-cadinene synthase-like OS=Cucurbita maxima OX=366...	[more]
A0A6J1EW93	5.1e-43	65.00	(+)-gamma-cadinene synthase-like OS=Cucurbita moschata OX=3662 GN=LOC111438481 P...	[more]
A0A6J1JAP8	6.6e-43	62.86	(+)-gamma-cadinene synthase-like OS=Cucurbita maxima OX=3661 GN=LOC111483273 PE=...	[more]
A0A6J1J7F9	1.9e-42	62.86	(+)-gamma-cadinene synthase-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]

BLAST of CmoCh16G008840 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022933272.1	1.2e-49	73.57	LOW QUALITY PROTEIN: (+)-gamma-cadinene synthase-like [Cucurbita moschata]	[more]
XP_022985144.1	4.4e-49	72.86	LOW QUALITY PROTEIN: (+)-gamma-cadinene synthase-like [Cucurbita maxima]	[more]
XP_023552098.1	1.3e-48	72.86	(+)-gamma-cadinene synthase-like [Cucurbita pepo subsp. pepo]	[more]
XP_022932164.1	1.1e-42	65.00	(+)-gamma-cadinene synthase-like [Cucurbita moschata]	[more]
XP_023520451.1	1.4e-42	65.00	LOW QUALITY PROTEIN: (+)-gamma-cadinene synthase-like [Cucurbita pepo subsp. pep...	[more]

BLAST of CmoCh16G008840 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G23960.1	1.6e-17	33.82	terpene synthase 21	[more]
AT5G23960.2	1.6e-17	33.82	terpene synthase 21	[more]
AT1G48800.1	1.9e-13	34.88	Terpenoid cyclases/Protein prenyltransferases superfamily protein	[more]
AT5G44630.1	2.4e-13	28.91	Terpenoid cyclases/Protein prenyltransferases superfamily protein	[more]
AT4G13300.1	7.8e-12	31.58	terpenoid synthase 13	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005630	Terpene synthase, metal-binding domain	PFAM	PF03936	Terpene_synth_C	coord: 2..86 e-value: 8.8E-15 score: 54.7
IPR008949	Isoprenoid synthase domain superfamily	GENE3D	1.10.600.10	Farnesyl Diphosphate Synthase	coord: 1..137 e-value: 1.3E-31 score: 111.6
IPR008949	Isoprenoid synthase domain superfamily	SUPERFAMILY	48576	Terpenoid synthases	coord: 2..134
None	No IPR available	PANTHER	PTHR31225	OS04G0344100 PROTEIN-RELATED	coord: 2..121
None	No IPR available	PANTHER	PTHR31225:SF134	(-)-GERMACRENE D SYNTHASE-LIKE	coord: 2..121

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh16G008840.1	CmoCh16G008840.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016102	diterpenoid biosynthetic process
biological_process	GO:0045338	farnesyl diphosphate metabolic process
biological_process	GO:0051762	sesquiterpene biosynthetic process
molecular_function	GO:0000287	magnesium ion binding
molecular_function	GO:0010334	sesquiterpene synthase activity
molecular_function	GO:0016829	lyase activity
molecular_function	GO:0010333	terpene synthase activity