CmoCh16G008830 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh16G008830
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	(+)-gamma-cadinene synthase-like
Location	Cmo_Chr16: 4800719 .. 4802060 (+)
RNA-Seq Expression	CmoCh16G008830
Synteny	CmoCh16G008830

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGGTGTATGGAGAAGATATCCTTGACGAAGCTCTTTTAGTGTCAAACATCTAAAAGATATTATAGCCAACTCACGCCCCGTTTTTGCAACTGAAGTTATAAGTGCCTTGAAATATCCTTTAAGAAAAGTCATTCCTAGATTAAAGGCAAGAGGGTACATATCCATGTATCAAGAGATCTTTCACATTCTCAAACTATGCTTACATTCTCAAAACTAGATTTCAACATATTATAGAAACTTCATTCGAAAAAGTTGATTGAAGTCATCAGGTTTATATTATCTAAATGTTTATACAGTTTTATATCGTTTTTTTTTCTCTCTATAAGTTTTCTTTAGCATTTTTAACTTCACATTCATTACACTCATTACACTGTTCAAATAATTAAATTTACTAGATTAAGTTTTTGGCTTCATTAGTGATTTTTATGATTTAAAATATGACTGGAACCATATTAATGTCATTTTCTCTTCCATTAATATTCATTTTCCACTTATTTGATCTATTATGTTAAGCTTTTGAATTCATTTGTATATCAACTCTTTTACGTGTACATAAATTAGAATTGCTTACCTACTATATAGGTGATGGTAGGATTTGAAGATTTTTTTAAAAAATTAAACGGTTTTTTCTCCACTAATTATATTTGCATCTTATATACATATTGTATAGGTGATGGAAGGATTTAAACGTCCAAACCAATTTTCCTTTTGCAAGAGACAGAATTGTTGAGTGTTACTTATGAACATTGGGGGTATACTTTGAACCTTAGTTCAGTGTTGAAAGAAAAATGTTAACTAAAGTAATTGCCATTTCTTCAATTTTACTTATGCTTATGGAACATTCGAAGAACTCCAAGTCCTCACTCCAACTATTCAAAGGTCACTAAAATTCATTCAAATTATGAAGATTTTAGCTTAAAAGTTCGGCTTACATAATACTAATTCTTTTGTTCATCGTACTACACACTCTTTAAAAACACCATATAAATTTTTTATATGGGAATAATCCATATTTAAAATAAAGTTGTAGATTTTATTAACGATGATGTCATTAAATTTTTCAAGTGGGATAGAAGCATGGTCAATGTACTCCATGAGTACATGAAACCTTTTTATATAGGAAAGTTAGATCTTTATAGGGAAATTAGTAAAGAGATAGATAAGGATGAAAGTTCACTCCACATTCATATGAGGGAAGAAGAGGTAAACTTTCTTCTCCTCCCTCCTATATCTTCTTCTCCTCCTCATTCTTGTATATAAGATTTTTTTTTTTTTAATTTTCGTTGATCATAACAGATAAAGAAACTAGCGGAATCCTACATCTACGAAGCTAAATGA

mRNA sequence

ATGAGGGTTGTCAAACATCTAAAAGATATTATAGCCAACTCACGCCCCGTTTTTGCAACTGAAGTTATAAGTGCCTTGAAATATCCTTTAAGAAAAGTCATTCCTAGATTAAAGGCAAGAGGTGTTGAAAGAAAAATGTTAACTAAAGTAATTGCCATTTCTTCAATTTTACTTATGCTTATGGAACATTCGAAGAACTCCAAGTCCTCACTCCAACTATTCAAAGATTTTATTAACGATGATGTCATTAAATTTTTCAAGTGGGATAGAAGCATGGTCAATGTACTCCATGAGTACATGAAACCTTTTTATATAGGAAAGTTAGATCTTTATAGGGAAATTAGTAAAGAGATAGATAAGGATGAAAGTTCACTCCACATTCATATGAGGGAAGAAGAGATAAAGAAACTAGCGGAATCCTACATCTACGAAGCTAAATGA

Coding sequence (CDS)

ATGAGGGTTGTCAAACATCTAAAAGATATTATAGCCAACTCACGCCCCGTTTTTGCAACTGAAGTTATAAGTGCCTTGAAATATCCTTTAAGAAAAGTCATTCCTAGATTAAAGGCAAGAGGTGTTGAAAGAAAAATGTTAACTAAAGTAATTGCCATTTCTTCAATTTTACTTATGCTTATGGAACATTCGAAGAACTCCAAGTCCTCACTCCAACTATTCAAAGATTTTATTAACGATGATGTCATTAAATTTTTCAAGTGGGATAGAAGCATGGTCAATGTACTCCATGAGTACATGAAACCTTTTTATATAGGAAAGTTAGATCTTTATAGGGAAATTAGTAAAGAGATAGATAAGGATGAAAGTTCACTCCACATTCATATGAGGGAAGAAGAGATAAAGAAACTAGCGGAATCCTACATCTACGAAGCTAAATGA

Protein sequence

MRVVKHLKDIIANSRPVFATEVISALKYPLRKVIPRLKARGVERKMLTKVIAISSILLMLMEHSKNSKSSLQLFKDFINDDVIKFFKWDRSMVNVLHEYMKPFYIGKLDLYREISKEIDKDESSLHIHMREEEIKKLAESYIYEAK

Homology

[Close]

BLAST of CmoCh16G008830 vs. ExPASy Swiss-Prot
Match: B2KSJ5 ((+)-gamma-cadinene synthase OS=Cucumis melo OX=3656 PE=1 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 4.2e-16
Identity = 73/218 (33.49%), Postives = 96/218 (44.04%), Query Frame = 0


Query: 6   HLKDII---ANSRPVFATEVISALKYPLRKVIPRLKAR---------------------- 65
           HL+  I   +N  P FA+EV +ALK P+RK +PR+KAR                      
Sbjct: 194 HLQTYIHRYSNINPSFASEVSNALKLPIRKSVPRIKAREYLEIYQQHPSHNETLLEFSKL 253

Query: 66  ----------------------------------------------------GVERKMLT 125
                                                                V RKMLT
Sbjct: 254 DFNILQKLHQKELSEICRWWKDLDVPTKFPFARDRIVECYFWTLGAYFEPQYSVGRKMLT 313

Query: 126 KVIAISSILLMLMEHSKNSKSSLQLFKDFINDDVIKFFKWDRSMVNVLHEYMKPFYIGKL 147
           KVIAI+SIL  + + +  +   LQ+    I        +WDRSMV+ L  YMKPFY+  L
Sbjct: 314 KVIAIASILDDIYD-AYGTFEELQVLTPAIQ-------RWDRSMVHTLPLYMKPFYVAML 373

[Close]

BLAST of CmoCh16G008830 vs. ExPASy Swiss-Prot
Match: Q6Q3H2 (Valencene synthase OS=Vitis vinifera OX=29760 GN=ValCS PE=1 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 4.2e-08
Identity = 37/103 (35.92%), Postives = 62/103 (60.19%), Query Frame = 0


Query: 44  RKMLTKVIAISSILLMLMEHSKNSKSSLQLFKDFINDDVIKFFKWDRSMVNVLHEYMKPF 103
           R++LTKVIA++SIL  + + +  +   L+LF + I        +WD + +N L EYMK  
Sbjct: 296 RRILTKVIAMTSILDDIHD-AYGTPEELKLFIEAIE-------RWDINSINQLPEYMKLC 355

Query: 104 YIGKLDLYREISKEIDKDESSLHIHMREEEIKKLAESYIYEAK 147
           Y+  LD+Y+EI +E++K+ +   +H  +E +K    +Y  EAK
Sbjct: 356 YVALLDVYKEIEEEMEKEGNQYRVHYAKEVMKNQVRAYFAEAK 390

[Close]

BLAST of CmoCh16G008830 vs. ExPASy Swiss-Prot
Match: E3W208 (Sesquiterpene synthase OS=Santalum spicatum OX=453088 PE=2 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.3e-06
Identity = 36/103 (34.95%), Postives = 56/103 (54.37%), Query Frame = 0


Query: 44  RKMLTKVIAISSILLMLMEHSKNSKSSLQLFKDFINDDVIKFFKWDRSMVNVLHEYMKPF 103
           RK++ KV  + S +  + + +  +   L+LF   I        +WD   ++ L EYMKP 
Sbjct: 301 RKIIIKVFTMISTIDDIYD-AYGTLDELKLFTKAIQ-------RWDIGSLDQLPEYMKPC 360

Query: 104 YIGKLDLYREISKEIDKDESSLHIHMREEEIKKLAESYIYEAK 147
           Y   LD+Y EI +E+D   S   +H  +EE+KK+ E Y+ EAK
Sbjct: 361 YKSVLDVYNEIEEEMDNQGSLFRMHYAKEEMKKIVEGYMDEAK 395

[Close]

BLAST of CmoCh16G008830 vs. ExPASy Swiss-Prot
Match: F6M8H6 (Probable sesquiterpene synthase OS=Santalum spicatum OX=453088 GN=SesquiTPS PE=3 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.3e-06
Identity = 36/103 (34.95%), Postives = 56/103 (54.37%), Query Frame = 0


Query: 44  RKMLTKVIAISSILLMLMEHSKNSKSSLQLFKDFINDDVIKFFKWDRSMVNVLHEYMKPF 103
           RK++ KV  + S +  + + +  +   L+LF   I        +WD   ++ L EYMKP 
Sbjct: 301 RKIIIKVFTMISTIDDIYD-AYGTLDELKLFTKAIQ-------RWDIGSLDQLPEYMKPC 360

Query: 104 YIGKLDLYREISKEIDKDESSLHIHMREEEIKKLAESYIYEAK 147
           Y   LD+Y EI +E+D   S   +H  +EE+KK+ E Y+ EAK
Sbjct: 361 YKSVLDVYNEIEEEMDNQGSLFRMHYAKEEMKKIVEGYMDEAK 395

[Close]

BLAST of CmoCh16G008830 vs. ExPASy Swiss-Prot
Match: F6M8H4 (Probable sesquiterpene synthase OS=Santalum album OX=35974 GN=SesquiTPS1 PE=3 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 8.7e-06
Identity = 35/103 (33.98%), Postives = 56/103 (54.37%), Query Frame = 0


Query: 44  RKMLTKVIAISSILLMLMEHSKNSKSSLQLFKDFINDDVIKFFKWDRSMVNVLHEYMKPF 103
           RK++ KV  + S +  + + +  +   L+LF + I        +WD   ++ L EYMKP 
Sbjct: 298 RKIIIKVFTMISTIDDIYD-AYGTVDELKLFTEAIR-------RWDVGSLDQLPEYMKPC 357

Query: 104 YIGKLDLYREISKEIDKDESSLHIHMREEEIKKLAESYIYEAK 147
           Y   L++Y EI +E+D   S   +H  +E +KKL E Y+ EAK
Sbjct: 358 YKSILEVYNEIEEEMDNQGSLFRMHYAKEVMKKLVEGYMDEAK 392

[Close]

BLAST of CmoCh16G008830 vs. ExPASy TrEMBL
Match: A0A6J1JCH1 (LOW QUALITY PROTEIN: (+)-gamma-cadinene synthase-like OS=Cucurbita maxima OX=3661 GN=LOC111483232 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 1.0e-25
Identity = 92/217 (42.40%), Postives = 107/217 (49.31%), Query Frame = 0


Query: 4   VKHLKDIIANSRPVFATEVISALKYPLRKVIPRLKAR----------------------- 63
           VKHLK+II+NS  +F  EV SALKYPLRK IPR+KAR                       
Sbjct: 191 VKHLKNIISNSSSIFVAEVKSALKYPLRKAIPRMKAREYISIYQEDPSHSKTLLTFSKLD 250

Query: 64  ---------------------------------------------------GVERKMLTK 123
                                                               V RK+LTK
Sbjct: 251 FNLLQRLHQKELIEVIRWWKDLKVETNFSFARDRIVECYLWTLGVYFEPQFSVGRKILTK 310

Query: 124 VIAISSILLMLMEHSKNSKSSLQLFKDFINDDVIKFFKWDRSMVNVLHEYMKPFYIGKLD 147
           V AISSIL  + + +  +   LQ+    I        +WDRSMVNVL EYMKPFYI  LD
Sbjct: 311 VTAISSILDDIYD-AYGTFEELQVITTAIQ-------RWDRSMVNVLPEYMKPFYIAMLD 370

[Close]

BLAST of CmoCh16G008830 vs. ExPASy TrEMBL
Match: A0A6J1EZA9 (LOW QUALITY PROTEIN: (+)-gamma-cadinene synthase-like OS=Cucurbita moschata OX=3662 GN=LOC111440345 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 1.9e-24
Identity = 91/217 (41.94%), Postives = 106/217 (48.85%), Query Frame = 0


Query: 4   VKHLKDIIANSRPVFATEVISALKYPLRKVIPRLKAR----------------------- 63
           VKHLK+II+NS P+F  EV SALKYPLRK IPR+KAR                       
Sbjct: 187 VKHLKNIISNSSPIFVAEVTSALKYPLRKAIPRMKAREYIPIYQEDPSHSKTLLTFSKLD 246

Query: 64  ---------------------------------------------------GVERKMLTK 123
                                                               V RKMLTK
Sbjct: 247 FNVLQKLHQKELIEVIRWWKDLKVETNFSFARDRIVECYLWTLGVYFEPQFSVGRKMLTK 306

Query: 124 VIAISSILLMLMEHSKNSKSSLQLFKDFINDDVIKFFKWDRSMVNVLHEYMKPFYIGKLD 147
           V AISSIL  + + +  +   LQ+         +   +WDRSMVNVL EYMKPFYI  LD
Sbjct: 307 VTAISSILDDIYD-AYGTFEELQVL-------TLAIQRWDRSMVNVLPEYMKPFYIAMLD 366

[Close]

BLAST of CmoCh16G008830 vs. ExPASy TrEMBL
Match: A0A6J1J7F9 ((+)-gamma-cadinene synthase-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111483269 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 1.1e-19
Identity = 82/217 (37.79%), Postives = 101/217 (46.54%), Query Frame = 0


Query: 4   VKHLKDIIANSRPVFATEVISALKYPLRKVIPRLKAR----------------------- 63
           VKHLK+IIANS      E+  ALK+PLRK +P+LKAR                       
Sbjct: 187 VKHLKNIIANSNSKLGAEIEHALKWPLRKDLPKLKAREYITMYQEDPSHSPTLLAFSKLD 246

Query: 64  ---------------------------------------------------GVERKMLTK 123
                                                               V RK+LTK
Sbjct: 247 FNILQKLYQKELKELTRWWKDLNVETNFPYARDRIVECYFWTLGAYFEPQFNVGRKILTK 306

Query: 124 VIAISSILLMLMEHSKNSKSSLQLFKDFINDDVIKFFKWDRSMVNVLHEYMKPFYIGKLD 147
           VIAISSIL    + +  +   LQ+F + I        +WDRSMV++L EYMKP YI  L+
Sbjct: 307 VIAISSILDDTYD-AYGTFEELQIFTEAIQ-------RWDRSMVSILPEYMKPLYIAMLN 366

[Close]

BLAST of CmoCh16G008830 vs. ExPASy TrEMBL
Match: A0A6J1J473 ((+)-gamma-cadinene synthase-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111483269 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 4.2e-19
Identity = 71/184 (38.59%), Postives = 99/184 (53.80%), Query Frame = 0


Query: 4   VKHLKDIIANSRPVFATEVISALKYPLRKVIPRLKARGV------ERKMLTKVIAISSIL 63
           VKHLK+IIANS      E+  ALK+PLRK +P+LKAR        +      ++A S + 
Sbjct: 187 VKHLKNIIANSNSKLGAEIEHALKWPLRKDLPKLKAREYITMYQEDPSHSPTLLAFSKLD 246

Query: 64  LMLME--HSKNSKSSLQLFKD--------FINDDVIKFF--------------------- 123
             +++  + K  K   + +KD        +  D +++ +                     
Sbjct: 247 FNILQKLYQKELKELTRWWKDLNVETNFPYARDRIVECYFWTLDDTYDAYGTFEELQIFT 306

Query: 124 ----KWDRSMVNVLHEYMKPFYIGKLDLYREISKEIDKDESSLHIHMREEEIKKLAESYI 147
               +WDRSMV++L EYMKP YI  L+ Y+EISKEI KDE+SLH+H  +EEIKKLA SY 
Sbjct: 307 EAIQRWDRSMVSILPEYMKPLYIAMLNHYKEISKEIGKDENSLHVHTPKEEIKKLARSYF 366

[Close]

BLAST of CmoCh16G008830 vs. ExPASy TrEMBL
Match: A0A6J1JAP8 ((+)-gamma-cadinene synthase-like OS=Cucurbita maxima OX=3661 GN=LOC111483273 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 9.3e-19
Identity = 81/217 (37.33%), Postives = 99/217 (45.62%), Query Frame = 0


Query: 4   VKHLKDIIANSRPVFATEVISALKYPLRKVIPRLKAR----------------------- 63
           VKHLK+IIANS      E+  ALK+PLRK +P+LKAR                       
Sbjct: 187 VKHLKNIIANSNSKLGAEIEHALKWPLRKDLPKLKAREYITMYQEDPSHSPTLLAFSKLD 246

Query: 64  ---------------------------------------------------GVERKMLTK 123
                                                               + R++LTK
Sbjct: 247 FNILQKLYQKELKELTRWWKDLNVETNFPYARDRIVECYFWTLGAYFEPQFNIGRRILTK 306

Query: 124 VIAISSILLMLMEHSKNSKSSLQLFKDFINDDVIKFFKWDRSMVNVLHEYMKPFYIGKLD 147
           VIAISSIL    + +  +   LQ+F   I        +WDRSM+N+L EYMKP Y+  L+
Sbjct: 307 VIAISSILDDTYD-AYGTFEELQVFTRAIQ-------RWDRSMINILPEYMKPLYLTMLN 366

[Close]

BLAST of CmoCh16G008830 vs. NCBI nr
Match: XP_023552098.1 ((+)-gamma-cadinene synthase-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 131.3 bits (329), Expect = 6.6e-27
Identity = 93/217 (42.86%), Postives = 108/217 (49.77%), Query Frame = 0


Query: 4   VKHLKDIIANSRPVFATEVISALKYPLRKVIPRLKAR----------------------- 63
           VKHLK+II+NS P+F  EV SALKYPLRK IPR+KAR                       
Sbjct: 187 VKHLKNIISNSSPIFVAEVTSALKYPLRKAIPRMKAREYIPIYEEDPSHSKTLLTFSKLD 246

Query: 64  ---------------------------------------------------GVERKMLTK 123
                                                               V RK+LTK
Sbjct: 247 FNILQKLHQKELIEVIRWWKDLKVETNFSFARDRIVECYLWTLGVYFEPQFSVGRKLLTK 306

Query: 124 VIAISSILLMLMEHSKNSKSSLQLFKDFINDDVIKFFKWDRSMVNVLHEYMKPFYIGKLD 147
           V AISSIL  + + +  +   LQ+    I        +WDRSMVNVL EYMKPFYI  LD
Sbjct: 307 VTAISSILDDIYD-AYGTFEELQVLTPAIQ-------RWDRSMVNVLPEYMKPFYIAMLD 366

[Close]

BLAST of CmoCh16G008830 vs. NCBI nr
Match: KAG6577414.1 (hypothetical protein SDJN03_24988, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 129.4 bits (324), Expect = 2.5e-26
Identity = 92/217 (42.40%), Postives = 107/217 (49.31%), Query Frame = 0


Query: 4   VKHLKDIIANSRPVFATEVISALKYPLRKVIPRLKAR----------------------- 63
           VKHLK+II+NS P+F  EV SALKYPLRK IPR+KAR                       
Sbjct: 187 VKHLKNIISNSSPIFVAEVTSALKYPLRKAIPRMKAREYIPIYQEDPSHSKTLLTFSKLD 246

Query: 64  ---------------------------------------------------GVERKMLTK 123
                                                               V RKMLTK
Sbjct: 247 FNVLQKLHQKELIEVIRWWKDLKVETNFSFARDRIVECYLWTLGVYFEPQFSVGRKMLTK 306

Query: 124 VIAISSILLMLMEHSKNSKSSLQLFKDFINDDVIKFFKWDRSMVNVLHEYMKPFYIGKLD 147
           V AISSIL  + + +  +   LQ+         +   +WDRSMVNVL EYMKPFY   LD
Sbjct: 307 VTAISSILDDIYD-AYGTFEELQVL-------TLAIQRWDRSMVNVLPEYMKPFYTAMLD 366

[Close]

BLAST of CmoCh16G008830 vs. NCBI nr
Match: XP_022985144.1 (LOW QUALITY PROTEIN: (+)-gamma-cadinene synthase-like [Cucurbita maxima])

HSP 1 Score: 126.3 bits (316), Expect = 2.1e-25
Identity = 92/217 (42.40%), Postives = 107/217 (49.31%), Query Frame = 0


Query: 4   VKHLKDIIANSRPVFATEVISALKYPLRKVIPRLKAR----------------------- 63
           VKHLK+II+NS  +F  EV SALKYPLRK IPR+KAR                       
Sbjct: 191 VKHLKNIISNSSSIFVAEVKSALKYPLRKAIPRMKAREYISIYQEDPSHSKTLLTFSKLD 250

Query: 64  ---------------------------------------------------GVERKMLTK 123
                                                               V RK+LTK
Sbjct: 251 FNLLQRLHQKELIEVIRWWKDLKVETNFSFARDRIVECYLWTLGVYFEPQFSVGRKILTK 310

Query: 124 VIAISSILLMLMEHSKNSKSSLQLFKDFINDDVIKFFKWDRSMVNVLHEYMKPFYIGKLD 147
           V AISSIL  + + +  +   LQ+    I        +WDRSMVNVL EYMKPFYI  LD
Sbjct: 311 VTAISSILDDIYD-AYGTFEELQVITTAIQ-------RWDRSMVNVLPEYMKPFYIAMLD 370

[Close]

BLAST of CmoCh16G008830 vs. NCBI nr
Match: XP_022933272.1 (LOW QUALITY PROTEIN: (+)-gamma-cadinene synthase-like [Cucurbita moschata])

HSP 1 Score: 122.1 bits (305), Expect = 4.0e-24
Identity = 91/217 (41.94%), Postives = 106/217 (48.85%), Query Frame = 0


Query: 4   VKHLKDIIANSRPVFATEVISALKYPLRKVIPRLKAR----------------------- 63
           VKHLK+II+NS P+F  EV SALKYPLRK IPR+KAR                       
Sbjct: 187 VKHLKNIISNSSPIFVAEVTSALKYPLRKAIPRMKAREYIPIYQEDPSHSKTLLTFSKLD 246

Query: 64  ---------------------------------------------------GVERKMLTK 123
                                                               V RKMLTK
Sbjct: 247 FNVLQKLHQKELIEVIRWWKDLKVETNFSFARDRIVECYLWTLGVYFEPQFSVGRKMLTK 306

Query: 124 VIAISSILLMLMEHSKNSKSSLQLFKDFINDDVIKFFKWDRSMVNVLHEYMKPFYIGKLD 147
           V AISSIL  + + +  +   LQ+         +   +WDRSMVNVL EYMKPFYI  LD
Sbjct: 307 VTAISSILDDIYD-AYGTFEELQVL-------TLAIQRWDRSMVNVLPEYMKPFYIAMLD 366

[Close]

BLAST of CmoCh16G008830 vs. NCBI nr
Match: XP_023520451.1 (LOW QUALITY PROTEIN: (+)-gamma-cadinene synthase-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 110.2 bits (274), Expect = 1.6e-20
Identity = 85/217 (39.17%), Postives = 101/217 (46.54%), Query Frame = 0


Query: 4   VKHLKDIIANSRPVFATEVISALKYPLRKVIPRLKAR----------------------- 63
           VK+L+D+  NS P FA EV SALK+PLRK +PRLKAR                       
Sbjct: 187 VKYLRDVTTNSNPKFADEVQSALKWPLRKTLPRLKARAYVTMYQEDPSHSQTLLAFSKLD 246

Query: 64  ---------------------------------------------------GVERKMLTK 123
                                                              GV RK+LTK
Sbjct: 247 FNVLQKLHRKELKELTRWWKDLEVPTNFPFARDRIVESYFWTLGAYFEPHFGVGRKILTK 306

Query: 124 VIAISSILLMLMEHSKNSKSSLQLFKDFINDDVIKFFKWDRSMVNVLHEYMKPFYIGKLD 147
           VI ISSIL  + + +  +   LQ+F   I        +WDRSMVNVL +YMK FYI  LD
Sbjct: 307 VIVISSILDDIYD-AYGTFEELQIFTTAIQ-------RWDRSMVNVLPKYMKHFYIAMLD 366

The following BLAST results are available for this feature:

BLAST of CmoCh16G008830 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B2KSJ5	4.2e-16	33.49	(+)-gamma-cadinene synthase OS=Cucumis melo OX=3656 PE=1 SV=1	[more]
Q6Q3H2	4.2e-08	35.92	Valencene synthase OS=Vitis vinifera OX=29760 GN=ValCS PE=1 SV=1	[more]
E3W208	1.3e-06	34.95	Sesquiterpene synthase OS=Santalum spicatum OX=453088 PE=2 SV=1	[more]
F6M8H6	1.3e-06	34.95	Probable sesquiterpene synthase OS=Santalum spicatum OX=453088 GN=SesquiTPS PE=3...	[more]
F6M8H4	8.7e-06	33.98	Probable sesquiterpene synthase OS=Santalum album OX=35974 GN=SesquiTPS1 PE=3 SV...	[more]

BLAST of CmoCh16G008830 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JCH1	1.0e-25	42.40	LOW QUALITY PROTEIN: (+)-gamma-cadinene synthase-like OS=Cucurbita maxima OX=366...	[more]
A0A6J1EZA9	1.9e-24	41.94	LOW QUALITY PROTEIN: (+)-gamma-cadinene synthase-like OS=Cucurbita moschata OX=3...	[more]
A0A6J1J7F9	1.1e-19	37.79	(+)-gamma-cadinene synthase-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1J473	4.2e-19	38.59	(+)-gamma-cadinene synthase-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1JAP8	9.3e-19	37.33	(+)-gamma-cadinene synthase-like OS=Cucurbita maxima OX=3661 GN=LOC111483273 PE=...	[more]

BLAST of CmoCh16G008830 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023552098.1	6.6e-27	42.86	(+)-gamma-cadinene synthase-like [Cucurbita pepo subsp. pepo]	[more]
KAG6577414.1	2.5e-26	42.40	hypothetical protein SDJN03_24988, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022985144.1	2.1e-25	42.40	LOW QUALITY PROTEIN: (+)-gamma-cadinene synthase-like [Cucurbita maxima]	[more]
XP_022933272.1	4.0e-24	41.94	LOW QUALITY PROTEIN: (+)-gamma-cadinene synthase-like [Cucurbita moschata]	[more]
XP_023520451.1	1.6e-20	39.17	LOW QUALITY PROTEIN: (+)-gamma-cadinene synthase-like [Cucurbita pepo subsp. pep...	[more]

BLAST of CmoCh16G008830 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005630	Terpene synthase, metal-binding domain	PFAM	PF03936	Terpene_synth_C	coord: 43..146 e-value: 2.4E-10 score: 40.2
IPR008949	Isoprenoid synthase domain superfamily	GENE3D	1.10.600.10	Farnesyl Diphosphate Synthase	coord: 36..146 e-value: 8.9E-12 score: 46.6
IPR008949	Isoprenoid synthase domain superfamily	SUPERFAMILY	48576	Terpenoid synthases	coord: 87..146

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh16G008830.1	CmoCh16G008830.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006720	isoprenoid metabolic process
molecular_function	GO:0000287	magnesium ion binding
molecular_function	GO:0010333	terpene synthase activity
molecular_function	GO:0016829	lyase activity