CmoCh16G008770 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh16G008770
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	(+)-gamma-cadinene synthase-like
Location	Cmo_Chr16: 4714370 .. 4714857 (+)
RNA-Seq Expression	CmoCh16G008770
Synteny	CmoCh16G008770

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACCACTAAGAAAAGCCCTTCCAAGATTAAAGGCAAGAGAGTATATATCAATGTATCGACAAGATGCTTCCCATTCTCAAACTTTGCTTACTTTTTCAAAATTAGATTTCGACATAAACTTCATCGAAATGAGTTGAAGGAACTCACATGTTTATATTTATTTGTGTATGCAATTTCATATTTAACCTATAAAATTACATTTTTAGGTTTATTGATACTATTTATTTTAAATTATCTCTCTAAAATTTGAACATTCAAACAAATTTCTCTTATGCAATAGATAGAATTGTTGAGTGCTACTTTGGGACATCGGGTGCGTACTTTAAACTGCAGTTTAATGTCAAAAGAAAAATATTAACTAAAATAATAGCTACTTCTTCAATTTTAGATGATATATATGATGCTTATGAAACATTTAAAGAACTCCAATTTTTCACTCCAGCAATTCAAAAGTGGATAACTAATAAATTTATTGTTTACATATAG

mRNA sequence

ATGACCACTAAGAAAAGCCCTTCCAAGATTAAAGGCAAGAGAGTATATATCAATGTATCGACAAGATGCTTCCCATTCTCAAACTTTGCTTACTTTTTCAAAATTAGATTTCGACATAAACTTCATCGAAATGAGTTGAAGGAACTCACATGTTTATATTTATTTGTGTATGCAATTTCATATTTAACCTATAAAATTACATTTTTAGATAGAATTGTTGAGTGCTACTTTGGGACATCGGGTGCGTACTTTAAACTGCAGTTTAATGTCAAAAGAAAAATATTAACTAAAATAATAGCTACTTCTTCAATTTTAGATGATATATATGATGCTTATGAAACATTTAAAGAACTCCAATTTTTCACTCCAGCAATTCAAAAGTGGATAACTAATAAATTTATTGTTTACATATAG

Coding sequence (CDS)

ATGACCACTAAGAAAAGCCCTTCCAAGATTAAAGGCAAGAGAGTATATATCAATGTATCGACAAGATGCTTCCCATTCTCAAACTTTGCTTACTTTTTCAAAATTAGATTTCGACATAAACTTCATCGAAATGAGTTGAAGGAACTCACATGTTTATATTTATTTGTGTATGCAATTTCATATTTAACCTATAAAATTACATTTTTAGATAGAATTGTTGAGTGCTACTTTGGGACATCGGGTGCGTACTTTAAACTGCAGTTTAATGTCAAAAGAAAAATATTAACTAAAATAATAGCTACTTCTTCAATTTTAGATGATATATATGATGCTTATGAAACATTTAAAGAACTCCAATTTTTCACTCCAGCAATTCAAAAGTGGATAACTAATAAATTTATTGTTTACATATAG

Protein sequence

MTTKKSPSKIKGKRVYINVSTRCFPFSNFAYFFKIRFRHKLHRNELKELTCLYLFVYAISYLTYKITFLDRIVECYFGTSGAYFKLQFNVKRKILTKIIATSSILDDIYDAYETFKELQFFTPAIQKWITNKFIVYI

Homology

[Close]

BLAST of CmoCh16G008770 vs. ExPASy Swiss-Prot
Match: B2KSJ5 ((+)-gamma-cadinene synthase OS=Cucumis melo OX=3656 PE=1 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 4.2e-18
Identity = 63/130 (48.46%), Postives = 82/130 (63.08%), Query Frame = 0


Query: 4   KKSPSKIKGKRVYINVSTRCFPFSN--FAYFFKIRFR--HKLHRNELKELTCLYLFVYAI 63
           +KS  +IK  R Y+ +  +  P  N     F K+ F    KLH+ EL E+ C +   +  
Sbjct: 222 RKSVPRIKA-REYLEIYQQ-HPSHNETLLEFSKLDFNILQKLHQKELSEI-CRW---WKD 281

Query: 64  SYLTYKITFL-DRIVECYFGTSGAYFKLQFNVKRKILTKIIATSSILDDIYDAYETFKEL 123
             +  K  F  DRIVECYF T GAYF+ Q++V RK+LTK+IA +SILDDIYDAY TF+EL
Sbjct: 282 LDVPTKFPFARDRIVECYFWTLGAYFEPQYSVGRKMLTKVIAIASILDDIYDAYGTFEEL 341

Query: 124 QFFTPAIQKW 129
           Q  TPAIQ+W
Sbjct: 342 QVLTPAIQRW 345

[Close]

BLAST of CmoCh16G008770 vs. ExPASy Swiss-Prot
Match: Q6Q3H3 ((-)-germacrene D synthase OS=Vitis vinifera OX=29760 GN=VIT_19s0014g04930 PE=1 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 9.6e-15
Identity = 41/90 (45.56%), Postives = 60/90 (66.67%), Query Frame = 0


Query: 40  KLHRNELKELTCLYLFVYAISYLTYKITFL-DRIVECYFGTSGAYFKLQFNVKRKILTKI 99
           KLH+ EL +++  +  +       +K+ F  DR+VECYF   G YF+ QF   R+ILTK+
Sbjct: 247 KLHQKELSDISAWWKDL----DFAHKLPFARDRVVECYFWILGVYFEPQFFFARRILTKV 306

Query: 100 IATSSILDDIYDAYETFKELQFFTPAIQKW 129
           IA +SI+DDIYD Y T +EL+ FT A+++W
Sbjct: 307 IAMTSIIDDIYDVYGTLEELELFTEAVERW 332

[Close]

BLAST of CmoCh16G008770 vs. ExPASy Swiss-Prot
Match: J9R5V4 (Valerena-4,7(11)-diene synthase OS=Valeriana officinalis OX=19953 GN=TPS2 PE=1 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 1.8e-13
Identity = 42/103 (40.78%), Postives = 60/103 (58.25%), Query Frame = 0


Query: 32  FFKIRFR--HKLHRNELKELTCLYLFVYAISYLTYKITFLDRIVECYFGTSGAYFKLQFN 91
           F KI F    KLH+ EL +LT  +  +     + Y     DR VECYF   G YF+ Q++
Sbjct: 241 FSKIDFNMLQKLHQRELADLTIWWEKLNVAEKMPYA---RDRFVECYFWGLGVYFEPQYS 300

Query: 92  VKRKILTKIIATSSILDDIYDAYETFKELQFFTPAIQKWITNK 133
             RK+  K+I  +S++DD YD+Y TF EL  FT A+++W  N+
Sbjct: 301 RARKMFVKVINLTSLIDDTYDSYGTFDELDLFTDAVKRWNVNE 340

[Close]

BLAST of CmoCh16G008770 vs. ExPASy Swiss-Prot
Match: Q49SP3 (Patchoulol synthase OS=Pogostemon cablin OX=28511 PE=1 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 3.1e-13
Identity = 40/88 (45.45%), Postives = 58/88 (65.91%), Query Frame = 0


Query: 41  LHRNELKELTCLYLFVYAISYLTYKITFLDRIVECYFGTSGAYFKLQFNVKRKILTKIIA 100
           LHR EL E +  +  +   + L++     DR+VE YF  SG+YF+  ++V R IL K +A
Sbjct: 242 LHRRELSEDSRWWKTLQVPTKLSF---VRDRLVESYFWASGSYFEPNYSVARMILAKGLA 301

Query: 101 TSSILDDIYDAYETFKELQFFTPAIQKW 129
             S++DD+YDAY TF+ELQ FT AI++W
Sbjct: 302 VLSLMDDVYDAYGTFEELQMFTDAIERW 326

[Close]

BLAST of CmoCh16G008770 vs. ExPASy Swiss-Prot
Match: Q84LF2 (5-epi-aristolochene synthase 3 OS=Nicotiana attenuata OX=49451 PE=1 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 4.0e-13
Identity = 40/92 (43.48%), Postives = 58/92 (63.04%), Query Frame = 0


Query: 41  LHRNELKELTCLYLFVYAISYLTYKITFLDRIVECYFGTSGAYFKLQFNVKRKILTKIIA 100
           LH+ EL E++  +  +  ++ L Y     DR+VECYF   G YF+ Q++  R IL K I+
Sbjct: 239 LHKQELAEVSRWWKDLDFVTTLPYA---RDRVVECYFWALGVYFEPQYSQARVILVKTIS 298

Query: 101 TSSILDDIYDAYETFKELQFFTPAIQKWITNK 133
             SI+DD +DAY T KEL+ +T AIQ+W  N+
Sbjct: 299 MISIVDDTFDAYGTIKELETYTDAIQRWDINE 327

[Close]

BLAST of CmoCh16G008770 vs. ExPASy TrEMBL
Match: A0A6J1J7F9 ((+)-gamma-cadinene synthase-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111483269 PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 5.7e-18
Identity = 58/99 (58.59%), Postives = 68/99 (68.69%), Query Frame = 0


Query: 32  FFKIRFR--HKLHRNELKELTCLYLFVYAISYLTYKITFLDRIVECYFGTSGAYFKLQFN 91
           F K+ F    KL++ ELKELT  +  +   +   Y     DRIVECYF T GAYF+ QFN
Sbjct: 242 FSKLDFNILQKLYQKELKELTRWWKDLNVETNFPYA---RDRIVECYFWTLGAYFEPQFN 301

Query: 92  VKRKILTKIIATSSILDDIYDAYETFKELQFFTPAIQKW 129
           V RKILTK+IA SSILDD YDAY TF+ELQ FT AIQ+W
Sbjct: 302 VGRKILTKVIAISSILDDTYDAYGTFEELQIFTEAIQRW 337

[Close]

BLAST of CmoCh16G008770 vs. ExPASy TrEMBL
Match: A0A6J1EN57 ((+)-gamma-cadinene synthase-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111435879 PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 5.7e-18
Identity = 62/127 (48.82%), Postives = 75/127 (59.06%), Query Frame = 0


Query: 4   KKSPSKIKGKRVYINVSTRCFPFSNFAYFFKIRFR--HKLHRNELKELTCLYLFVYAISY 63
           +K   K+KG+                  F K+ F    KL++ ELKELT  +  +   + 
Sbjct: 214 RKDLPKLKGREYITMYQEDPSHSQTLLAFSKLDFNILQKLYQKELKELTRWWKDLNVETN 273

Query: 64  LTYKITFLDRIVECYFGTSGAYFKLQFNVKRKILTKIIATSSILDDIYDAYETFKELQFF 123
             Y     DRIVECYF T GAYF+ QFNV RKILTK+IA SSILDD YDAY TF+ELQ F
Sbjct: 274 FPYA---RDRIVECYFWTLGAYFEPQFNVGRKILTKVIAISSILDDTYDAYGTFEELQIF 333

Query: 124 TPAIQKW 129
           T AIQ+W
Sbjct: 334 TEAIQRW 337

[Close]

BLAST of CmoCh16G008770 vs. ExPASy TrEMBL
Match: A0A6J1ETS1 ((+)-gamma-cadinene synthase-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111435879 PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 5.7e-18
Identity = 62/127 (48.82%), Postives = 75/127 (59.06%), Query Frame = 0


Query: 4   KKSPSKIKGKRVYINVSTRCFPFSNFAYFFKIRFR--HKLHRNELKELTCLYLFVYAISY 63
           +K   K+KG+                  F K+ F    KL++ ELKELT  +  +   + 
Sbjct: 202 RKDLPKLKGREYITMYQEDPSHSQTLLAFSKLDFNILQKLYQKELKELTRWWKDLNVETN 261

Query: 64  LTYKITFLDRIVECYFGTSGAYFKLQFNVKRKILTKIIATSSILDDIYDAYETFKELQFF 123
             Y     DRIVECYF T GAYF+ QFNV RKILTK+IA SSILDD YDAY TF+ELQ F
Sbjct: 262 FPYA---RDRIVECYFWTLGAYFEPQFNVGRKILTKVIAISSILDDTYDAYGTFEELQIF 321

Query: 124 TPAIQKW 129
           T AIQ+W
Sbjct: 322 TEAIQRW 325

[Close]

BLAST of CmoCh16G008770 vs. ExPASy TrEMBL
Match: A0A6J1JAP8 ((+)-gamma-cadinene synthase-like OS=Cucurbita maxima OX=3661 GN=LOC111483273 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 2.8e-17
Identity = 56/99 (56.57%), Postives = 68/99 (68.69%), Query Frame = 0


Query: 32  FFKIRFR--HKLHRNELKELTCLYLFVYAISYLTYKITFLDRIVECYFGTSGAYFKLQFN 91
           F K+ F    KL++ ELKELT  +  +   +   Y     DRIVECYF T GAYF+ QFN
Sbjct: 242 FSKLDFNILQKLYQKELKELTRWWKDLNVETNFPYA---RDRIVECYFWTLGAYFEPQFN 301

Query: 92  VKRKILTKIIATSSILDDIYDAYETFKELQFFTPAIQKW 129
           + R+ILTK+IA SSILDD YDAY TF+ELQ FT AIQ+W
Sbjct: 302 IGRRILTKVIAISSILDDTYDAYGTFEELQVFTRAIQRW 337

[Close]

BLAST of CmoCh16G008770 vs. ExPASy TrEMBL
Match: A0A6J1EW93 ((+)-gamma-cadinene synthase-like OS=Cucurbita moschata OX=3662 GN=LOC111438481 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 3.1e-16
Identity = 56/99 (56.57%), Postives = 67/99 (67.68%), Query Frame = 0


Query: 32  FFKIRFR--HKLHRNELKELTCLYLFVYAISYLTYKITFLDRIVECYFGTSGAYFKLQFN 91
           F K+ F    KLH+ ELKELT  +  +   +   +     DRIVE YF T GAYF+  F+
Sbjct: 242 FSKLDFSILQKLHQRELKELTRWWKDLEVPTNFPFA---RDRIVESYFWTLGAYFEPHFS 301

Query: 92  VKRKILTKIIATSSILDDIYDAYETFKELQFFTPAIQKW 129
           V RKILTK+IA SSILDDIYDAY TF+ELQ FT AIQ+W
Sbjct: 302 VGRKILTKVIALSSILDDIYDAYGTFEELQVFTTAIQRW 337

[Close]

BLAST of CmoCh16G008770 vs. NCBI nr
Match: XP_022985191.1 ((+)-gamma-cadinene synthase-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 100.5 bits (249), Expect = 1.2e-17
Identity = 58/99 (58.59%), Postives = 68/99 (68.69%), Query Frame = 0


Query: 32  FFKIRFR--HKLHRNELKELTCLYLFVYAISYLTYKITFLDRIVECYFGTSGAYFKLQFN 91
           F K+ F    KL++ ELKELT  +  +   +   Y     DRIVECYF T GAYF+ QFN
Sbjct: 242 FSKLDFNILQKLYQKELKELTRWWKDLNVETNFPYA---RDRIVECYFWTLGAYFEPQFN 301

Query: 92  VKRKILTKIIATSSILDDIYDAYETFKELQFFTPAIQKW 129
           V RKILTK+IA SSILDD YDAY TF+ELQ FT AIQ+W
Sbjct: 302 VGRKILTKVIAISSILDDTYDAYGTFEELQIFTEAIQRW 337

[Close]

BLAST of CmoCh16G008770 vs. NCBI nr
Match: XP_022929225.1 ((+)-gamma-cadinene synthase-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 100.5 bits (249), Expect = 1.2e-17
Identity = 62/127 (48.82%), Postives = 75/127 (59.06%), Query Frame = 0


Query: 4   KKSPSKIKGKRVYINVSTRCFPFSNFAYFFKIRFR--HKLHRNELKELTCLYLFVYAISY 63
           +K   K+KG+                  F K+ F    KL++ ELKELT  +  +   + 
Sbjct: 202 RKDLPKLKGREYITMYQEDPSHSQTLLAFSKLDFNILQKLYQKELKELTRWWKDLNVETN 261

Query: 64  LTYKITFLDRIVECYFGTSGAYFKLQFNVKRKILTKIIATSSILDDIYDAYETFKELQFF 123
             Y     DRIVECYF T GAYF+ QFNV RKILTK+IA SSILDD YDAY TF+ELQ F
Sbjct: 262 FPYA---RDRIVECYFWTLGAYFEPQFNVGRKILTKVIAISSILDDTYDAYGTFEELQIF 321

Query: 124 TPAIQKW 129
           T AIQ+W
Sbjct: 322 TEAIQRW 325

[Close]

BLAST of CmoCh16G008770 vs. NCBI nr
Match: XP_022929224.1 ((+)-gamma-cadinene synthase-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 100.5 bits (249), Expect = 1.2e-17
Identity = 62/127 (48.82%), Postives = 75/127 (59.06%), Query Frame = 0


Query: 4   KKSPSKIKGKRVYINVSTRCFPFSNFAYFFKIRFR--HKLHRNELKELTCLYLFVYAISY 63
           +K   K+KG+                  F K+ F    KL++ ELKELT  +  +   + 
Sbjct: 214 RKDLPKLKGREYITMYQEDPSHSQTLLAFSKLDFNILQKLYQKELKELTRWWKDLNVETN 273

Query: 64  LTYKITFLDRIVECYFGTSGAYFKLQFNVKRKILTKIIATSSILDDIYDAYETFKELQFF 123
             Y     DRIVECYF T GAYF+ QFNV RKILTK+IA SSILDD YDAY TF+ELQ F
Sbjct: 274 FPYA---RDRIVECYFWTLGAYFEPQFNVGRKILTKVIAISSILDDTYDAYGTFEELQIF 333

Query: 124 TPAIQKW 129
           T AIQ+W
Sbjct: 334 TEAIQRW 337

[Close]

BLAST of CmoCh16G008770 vs. NCBI nr
Match: XP_023552097.1 ((+)-gamma-cadinene synthase-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 99.4 bits (246), Expect = 2.6e-17
Identity = 57/99 (57.58%), Postives = 68/99 (68.69%), Query Frame = 0


Query: 32  FFKIRFR--HKLHRNELKELTCLYLFVYAISYLTYKITFLDRIVECYFGTSGAYFKLQFN 91
           F K+ F    KL++ ELKELT  +  +   +   Y     DRIVECYF T GAYF+ QFN
Sbjct: 242 FSKLDFNILQKLYQKELKELTRWWKDLNVQTNFPYA---RDRIVECYFWTLGAYFEPQFN 301

Query: 92  VKRKILTKIIATSSILDDIYDAYETFKELQFFTPAIQKW 129
           V RKILTK+IA SSILDD YDAY TF+EL+ FT AIQ+W
Sbjct: 302 VGRKILTKVIAISSILDDTYDAYGTFEELEIFTQAIQRW 337

[Close]

BLAST of CmoCh16G008770 vs. NCBI nr
Match: KAG6577411.1 (hypothetical protein SDJN03_24985, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 99.0 bits (245), Expect = 3.4e-17
Identity = 57/99 (57.58%), Postives = 66/99 (66.67%), Query Frame = 0


Query: 32  FFKIRFR--HKLHRNELKELTCLYLFVYAISYLTYKITFLDRIVECYFGTSGAYFKLQFN 91
           F K+ F    KLH+ ELKELT  +  +   +   Y     DRIVECYF   G YF+ QFN
Sbjct: 15  FSKLDFNLLQKLHQKELKELTRWWKDLNVQTNFPYA---RDRIVECYFWRLGVYFEPQFN 74

Query: 92  VKRKILTKIIATSSILDDIYDAYETFKELQFFTPAIQKW 129
           V RKILTK+IA SSILDD YDAY TF+ELQ FT AIQ+W
Sbjct: 75  VGRKILTKVIAISSILDDTYDAYGTFEELQIFTQAIQRW 110

[Close]

BLAST of CmoCh16G008770 vs. TAIR 10
Match: AT4G16740.1 (terpene synthase 03 )

HSP 1 Score: 67.0 bits (162), Expect = 1.3e-11
Identity = 36/97 (37.11%), Postives = 58/97 (59.79%), Query Frame = 0


Query: 37  FRHKLHRNELKELTCLYLFVYAISYLTYKITFL-DRIVECYFGTSGAYFKLQFNVKRKIL 96
           F   +H++ELK L+      ++ + LT  + F+ DRI E YF + G  ++ +F   R++L
Sbjct: 254 FVQAIHQDELKSLSSW----WSKTGLTKHLDFVRDRITEGYFSSVGVMYEPEFAYHRQML 313

Query: 97  TKIIATSSILDDIYDAYETFKELQFFTPAIQKWITNK 133
           TK+    + +DDIYD Y T +ELQ FT  ++KW  N+
Sbjct: 314 TKVFMLITTIDDIYDIYGTLEELQLFTTIVEKWDVNR 346

[Close]

BLAST of CmoCh16G008770 vs. TAIR 10
Match: AT4G16740.2 (terpene synthase 03 )

HSP 1 Score: 67.0 bits (162), Expect = 1.3e-11
Identity = 36/97 (37.11%), Postives = 58/97 (59.79%), Query Frame = 0


Query: 37  FRHKLHRNELKELTCLYLFVYAISYLTYKITFL-DRIVECYFGTSGAYFKLQFNVKRKIL 96
           F   +H++ELK L+      ++ + LT  + F+ DRI E YF + G  ++ +F   R++L
Sbjct: 254 FVQAIHQDELKSLSSW----WSKTGLTKHLDFVRDRITEGYFSSVGVMYEPEFAYHRQML 313

Query: 97  TKIIATSSILDDIYDAYETFKELQFFTPAIQKWITNK 133
           TK+    + +DDIYD Y T +ELQ FT  ++KW  N+
Sbjct: 314 TKVFMLITTIDDIYDIYGTLEELQLFTTIVEKWDVNR 346

[Close]

BLAST of CmoCh16G008770 vs. TAIR 10
Match: AT4G16730.1 (terpene synthase 02 )

HSP 1 Score: 65.5 bits (158), Expect = 3.9e-11
Identity = 41/118 (34.75%), Postives = 58/118 (49.15%), Query Frame = 0


Query: 14  RVYINVSTRCFPFSNFAYFFKIRFRHKLHRNELKELTCLYLFVYAISYLTYKITFLDRIV 73
           R YINV  +    +     F     + L  N  +EL  +  +  +   +       DRI 
Sbjct: 197 RWYINVYEKKHEMNPLLLEFAAIDFNMLQANHQEELKLISSWWNSTGLMKQLDFVRDRIT 256

Query: 74  ECYFGTSGAYFKLQFNVKRKILTKIIATSSILDDIYDAYETFKELQFFTPAIQKWITN 132
           E YF T G +++ +F   RKILTKI     I+DDIYD Y T +EL+ FT  ++KW  N
Sbjct: 257 ESYFWTIGIFYEPEFKYCRKILTKIFMLIVIMDDIYDIYGTLEELELFTNVVEKWDVN 314

[Close]

BLAST of CmoCh16G008770 vs. TAIR 10
Match: AT3G25820.1 (terpene synthase-like sequence-1,8-cineole )

HSP 1 Score: 62.0 bits (149), Expect = 4.3e-10
Identity = 31/72 (43.06%), Postives = 46/72 (63.89%), Query Frame = 0


Query: 62  LTYKITFL-DRIVECYFGTSGAYFKLQFNVKRKILTKIIATSSILDDIYDAYETFKELQF 121
           LT ++ F+ DRIVE YF T G  ++ QF   R+I+T + A  + +DDIYD Y T +EL+ 
Sbjct: 297 LTNQLPFVRDRIVENYFWTVGLIYEPQFGYIRRIMTIVNALVTTIDDIYDIYGTLEELEL 356

Query: 122 FTPAIQKWITNK 133
           FT  ++ W  N+
Sbjct: 357 FTSMVENWDVNR 368

[Close]

BLAST of CmoCh16G008770 vs. TAIR 10
Match: AT3G25830.1 (terpene synthase-like sequence-1,8-cineole )

HSP 1 Score: 62.0 bits (149), Expect = 4.3e-10
Identity = 31/72 (43.06%), Postives = 46/72 (63.89%), Query Frame = 0


Query: 62  LTYKITFL-DRIVECYFGTSGAYFKLQFNVKRKILTKIIATSSILDDIYDAYETFKELQF 121
           LT ++ F+ DRIVE YF T G  ++ QF   R+I+T + A  + +DDIYD Y T +EL+ 
Sbjct: 297 LTNQLPFVRDRIVENYFWTVGLIYEPQFGYIRRIMTIVNALVTTIDDIYDIYGTLEELEL 356

Query: 122 FTPAIQKWITNK 133
           FT  ++ W  N+
Sbjct: 357 FTSMVENWDVNR 368

The following BLAST results are available for this feature:

BLAST of CmoCh16G008770 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B2KSJ5	4.2e-18	48.46	(+)-gamma-cadinene synthase OS=Cucumis melo OX=3656 PE=1 SV=1	[more]
Q6Q3H3	9.6e-15	45.56	(-)-germacrene D synthase OS=Vitis vinifera OX=29760 GN=VIT_19s0014g04930 PE=1 S...	[more]
J9R5V4	1.8e-13	40.78	Valerena-4,7(11)-diene synthase OS=Valeriana officinalis OX=19953 GN=TPS2 PE=1 S...	[more]
Q49SP3	3.1e-13	45.45	Patchoulol synthase OS=Pogostemon cablin OX=28511 PE=1 SV=1	[more]
Q84LF2	4.0e-13	43.48	5-epi-aristolochene synthase 3 OS=Nicotiana attenuata OX=49451 PE=1 SV=1	[more]

BLAST of CmoCh16G008770 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J7F9	5.7e-18	58.59	(+)-gamma-cadinene synthase-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1EN57	5.7e-18	48.82	(+)-gamma-cadinene synthase-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1ETS1	5.7e-18	48.82	(+)-gamma-cadinene synthase-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1JAP8	2.8e-17	56.57	(+)-gamma-cadinene synthase-like OS=Cucurbita maxima OX=3661 GN=LOC111483273 PE=...	[more]
A0A6J1EW93	3.1e-16	56.57	(+)-gamma-cadinene synthase-like OS=Cucurbita moschata OX=3662 GN=LOC111438481 P...	[more]

BLAST of CmoCh16G008770 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022985191.1	1.2e-17	58.59	(+)-gamma-cadinene synthase-like isoform X1 [Cucurbita maxima]	[more]
XP_022929225.1	1.2e-17	48.82	(+)-gamma-cadinene synthase-like isoform X2 [Cucurbita moschata]	[more]
XP_022929224.1	1.2e-17	48.82	(+)-gamma-cadinene synthase-like isoform X1 [Cucurbita moschata]	[more]
XP_023552097.1	2.6e-17	57.58	(+)-gamma-cadinene synthase-like [Cucurbita pepo subsp. pepo]	[more]
KAG6577411.1	3.4e-17	57.58	hypothetical protein SDJN03_24985, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of CmoCh16G008770 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16740.1	1.3e-11	37.11	terpene synthase 03	[more]
AT4G16740.2	1.3e-11	37.11	terpene synthase 03	[more]
AT4G16730.1	3.9e-11	34.75	terpene synthase 02	[more]
AT3G25820.1	4.3e-10	43.06	terpene synthase-like sequence-1,8-cineole	[more]
AT3G25830.1	4.3e-10	43.06	terpene synthase-like sequence-1,8-cineole	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005630	Terpene synthase, metal-binding domain	PFAM	PF03936	Terpene_synth_C	coord: 38..129 e-value: 4.1E-20 score: 72.2
IPR008949	Isoprenoid synthase domain superfamily	GENE3D	1.10.600.10	Farnesyl Diphosphate Synthase	coord: 3..134 e-value: 4.1E-21 score: 77.2
IPR008949	Isoprenoid synthase domain superfamily	SUPERFAMILY	48576	Terpenoid synthases	coord: 38..128
None	No IPR available	PANTHER	PTHR31225:SF42	5-EPIARISTOLOCHENE SYNTHASE	coord: 40..129
None	No IPR available	PANTHER	PTHR31225	OS04G0344100 PROTEIN-RELATED	coord: 40..129

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh16G008770.1	CmoCh16G008770.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045338	farnesyl diphosphate metabolic process
biological_process	GO:0051762	sesquiterpene biosynthetic process
molecular_function	GO:0000287	magnesium ion binding
molecular_function	GO:0010334	sesquiterpene synthase activity
molecular_function	GO:0016829	lyase activity
molecular_function	GO:0010333	terpene synthase activity