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CmoCh16G008600 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGCCTAGTCCCGTCGAGAGATAATCGAAGCCCGTTTATTTCTTCTCCCCTGTAGATTATTTTCGCCGCCCACCGATCAAATGGATGACGTCGCCGGAAACAACCGTATTCGTAATCTGAAAGACGGCTTTCACCACCGCGACCTGCGGACTAAGATCATCCACTTTCTTAACGGCGTTGGCAAGTTCGCCGTGGACTCTACCATATTCACCTCTCTCAAGGCCGTCTCCGGTTCTTTTTCCTCTCTCTTTCTCACAAACATACATCTGTGGATTATTTTACAAATTTTTTTGTGATTTCAATTTTTTCATTTACATCGAAGACACTACGAACCCTAATTAGTTCTGGTTAAGATTCAGTATCGTGTTCTATAGCTCTAATATTTTGTATGGGCTTCTTCGCTACCCCAACCAAATATTCTGTTCGACTTTCTGAAATATCGGATTTATTCCCACCCCGTTGCCCCAAAAGGATGGAAAATGTTTGTGATAGTATTACGTTTGTTTTGTATTAGGAATATGCGTGGAAGAAAATTGAAGTTTGCATATTGCAATAGGATGGTTTGTGTGTCATAGTTCTTTGTGAAGTTCCAAATAGTTGAATTCTGCTCGGCCTGAATGTTCAATTTTCCTCCAGCAGTTCCAAAATAAGTACCAAAATTTGGATTCCAATTTATTTTGATCCAGTTTTCCCTCGAGTGACTCTAGGTGAAAATTCTCAATTTATTGTGCCAAGTCTCCATGAGTTAACACGTTAGATAAAGTTTGGGGTTGATGACCCTGATTAGGTCATTGTGTTGCATTCTCTGTAGTTGGGCAGCTAGAGACCTGGTCCATATTTTCTGTGTGATTTAGCCCTCGTTGTTCAGATTTTCTTCTTTCTTTTTTTTTTTAGGAGTTTGGCTTAAGTTTATCTAGACATATGGTGTGAGATCCCACGTCGGTTAAGGAGGAGATTGAAACCTTCTGTTAAGGGTGTGTAAACCTGTCCCTATGAGACGCAAAACCTTGAGGAAAAGCCCAAAAAGGACAATATCTAATAGTGAGTTTAGTCTATTACAAATGGTATAAAAGCCAAACACCGGGCGATGTGCTAGTGAGGAGGTTGAGTCTCGAAGGGTGGTGGACATGAGGTGGTGTGCCAGTAAGGATACTAGGCCCTGAAGAGGAGTGAATTGGGGGATCCCACATCGATTAGAGAAAGGAACAAATGCCAGCGAGGACGTTGGATCTTGAAGGGGGTGGATTGTGAGATCTCACGTCAGTCGAGGAGGAGTATGAAACATTATAAGGGCGTGGAAACCTCACCCTAGAAGACACGTTTTAAAAATCTTGAGGAGAAGCTCGGAAGGGAAAGCCCAGAAAAGACAATATGTGCTAGTGGTGGATTTGGACTGTTGAGAAGTTACTTCTCCATCCTCCCTTTTGAGAGAGGGGAAGGTTTTGTGGCATGGAATTTGTGCTGTTTTCTGGGACTTTGGAAAGAGAGGAATAACAAGATCTTGAGAAGTCTTTGAGTGATGTTTGGGTCTTTATTAGGTCCAAAGTCTTTTTGTTGGCTTCGCTGAGATCATCCCTTATTGTGCCAGTTTTAGATTATACTCTGATTGGTTTAGATTTAAAAAAATGGTTTGGGCTTCAGTTTTTTTGTTTTTTCTTAATCTGAATCGTTGGTATAGTATTGCCTCTGATAAATGACTGACCTGAATTGATCTAGTTGCATCCCTACTGATAATTTGCTGTCATTTTAGTTGGTTTGGTCTACGAAAAACAATTAACTCAATTCAAATGGCGAAAAGGCATTGTTATGTTTACAGCTTCTTTCCTTGCATTCCTTTCTTGGCTGAAATGATCAATGCCCTGGTTTTTCAAGGATGAGCTTTGGAAGACTTCTGCTAGTATTCAACTTTGCGTCTCCTTATTTTCGGTTTCTTCTCATACTTGGGTGATGTAGGTAATAATCAGGTGAATAAGATTAGGCAGGGAGGATTAAAGGACCCGCCCCATTCACCCTCTTTAAATGAAAAGCAACCAGAAGAGCTTAAGCTAGTGATGGATAAGATGGCAGCAGAGATGGAAGAAGCAGAGGCAAACAAGAACAAAATGAAACTACACCATTGTACATCTGCAAACATTGTTGATGGGTCTGTACCACTGAAGAAGTTGCCAGGGGAAGGTCCCAAAGGATCAGCCAACGTAATGCAAAACAAGAAACGGATCTTCATCCGTTCCCGACTGTAGACGATATCGAGTCCATTGTTGTAGTAGCATAGCAAGAATAATGAATTCCTTTCTTCCCAAGGTATATAAGTTTGGTGATAGTGTTTGATGTTAAAATTAGTTAATAATTTATCATGTCTTTAAAGCTATGGCATCCAATATTATCATGGATGACGTTCTTAGCAAGTAGAATACAAACCCCTCTTGTTCCCTCGTGTGTTTTAAGATTGATTTGGCTAATAGCATGTTGTTTTTGCC TGCCTAGTCCCGTCGAGAGATAATCGAAGCCCGTTTATTTCTTCTCCCCTGTAGATTATTTTCGCCGCCCACCGATCAAATGGATGACGTCGCCGGAAACAACCGTATTCGTAATCTGAAAGACGGCTTTCACCACCGCGACCTGCGGACTAAGATCATCCACTTTCTTAACGGCGTTGGCAAGTTCGCCGTGGACTCTACCATATTCACCTCTCTCAAGGCCGTCTCCGGTAATAATCAGGTGAATAAGATTAGGCAGGGAGGATTAAAGGACCCGCCCCATTCACCCTCTTTAAATGAAAAGCAACCAGAAGAGCTTAAGCTAGTGATGGATAAGATGGCAGCAGAGATGGAAGAAGCAGAGGCAAACAAGAACAAAATGAAACTACACCATTGTACATCTGCAAACATTGTTGATGGGTCTGTACCACTGAAGAAGTTGCCAGGGGAAGGTCCCAAAGGATCAGCCAACGTAATGCAAAACAAGAAACGGATCTTCATCCGTTCCCGACTGTAGACGATATCGAGTCCATTGTTGTAGTAGCATAGCAAGAATAATGAATTCCTTTCTTCCCAAGGTATATAAGTTTGGTGATAGTGTTTGATGTTAAAATTAGTTAATAATTTATCATGTCTTTAAAGCTATGGCATCCAATATTATCATGGATGACGTTCTTAGCAAGTAGAATACAAACCCCTCTTGTTCCCTCGTGTGTTTTAAGATTGATTTGGCTAATAGCATGTTGTTTTTGCC ATGGATGACGTCGCCGGAAACAACCGTATTCGTAATCTGAAAGACGGCTTTCACCACCGCGACCTGCGGACTAAGATCATCCACTTTCTTAACGGCGTTGGCAAGTTCGCCGTGGACTCTACCATATTCACCTCTCTCAAGGCCGTCTCCGGTAATAATCAGGTGAATAAGATTAGGCAGGGAGGATTAAAGGACCCGCCCCATTCACCCTCTTTAAATGAAAAGCAACCAGAAGAGCTTAAGCTAGTGATGGATAAGATGGCAGCAGAGATGGAAGAAGCAGAGGCAAACAAGAACAAAATGAAACTACACCATTGTACATCTGCAAACATTGTTGATGGGTCTGTACCACTGAAGAAGTTGCCAGGGGAAGGTCCCAAAGGATCAGCCAACGTAATGCAAAACAAGAAACGGATCTTCATCCGTTCCCGACTGTAG MDDVAGNNRIRNLKDGFHHRDLRTKIIHFLNGVGKFAVDSTIFTSLKAVSGNNQVNKIRQGGLKDPPHSPSLNEKQPEELKLVMDKMAAEMEEAEANKNKMKLHHCTSANIVDGSVPLKKLPGEGPKGSANVMQNKKRIFIRSRL Homology
BLAST of CmoCh16G008600 vs. ExPASy TrEMBL
Match: A0A1S3BUM3 (uncharacterized protein LOC103493357 OS=Cucumis melo OX=3656 GN=LOC103493357 PE=4 SV=1) HSP 1 Score: 217.2 bits (552), Expect = 4.4e-53 Identity = 117/148 (79.05%), Postives = 124/148 (83.78%), Query Frame = 0
BLAST of CmoCh16G008600 vs. ExPASy TrEMBL
Match: A0A5D3BVT6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G001010 PE=4 SV=1) HSP 1 Score: 215.7 bits (548), Expect = 1.3e-52 Identity = 116/148 (78.38%), Postives = 124/148 (83.78%), Query Frame = 0
BLAST of CmoCh16G008600 vs. ExPASy TrEMBL
Match: A0A6J1CP03 (uncharacterized protein LOC111012775 OS=Momordica charantia OX=3673 GN=LOC111012775 PE=4 SV=1) HSP 1 Score: 206.5 bits (524), Expect = 7.8e-50 Identity = 114/148 (77.03%), Postives = 121/148 (81.76%), Query Frame = 0
BLAST of CmoCh16G008600 vs. ExPASy TrEMBL
Match: A0A0A0L6J4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G099730 PE=4 SV=1) HSP 1 Score: 203.0 bits (515), Expect = 8.6e-49 Identity = 114/157 (72.61%), Postives = 123/157 (78.34%), Query Frame = 0
BLAST of CmoCh16G008600 vs. ExPASy TrEMBL
Match: A0A7N2M8R1 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 105.9 bits (263), Expect = 1.4e-19 Identity = 71/149 (47.65%), Postives = 90/149 (60.40%), Query Frame = 0
BLAST of CmoCh16G008600 vs. NCBI nr
Match: KAG6577390.1 (hypothetical protein SDJN03_24964, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015467.1 hypothetical protein SDJN02_23103, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 290.0 bits (741), Expect = 1.1e-74 Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0
BLAST of CmoCh16G008600 vs. NCBI nr
Match: XP_023552444.1 (uncharacterized protein LOC111810104 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 279.6 bits (714), Expect = 1.5e-71 Identity = 141/145 (97.24%), Postives = 141/145 (97.24%), Query Frame = 0
BLAST of CmoCh16G008600 vs. NCBI nr
Match: XP_038905013.1 (uncharacterized protein LOC120091185 [Benincasa hispida]) HSP 1 Score: 234.2 bits (596), Expect = 7.2e-58 Identity = 118/145 (81.38%), Postives = 127/145 (87.59%), Query Frame = 0
BLAST of CmoCh16G008600 vs. NCBI nr
Match: XP_008452286.1 (PREDICTED: uncharacterized protein LOC103493357 [Cucumis melo]) HSP 1 Score: 217.2 bits (552), Expect = 9.1e-53 Identity = 117/148 (79.05%), Postives = 124/148 (83.78%), Query Frame = 0
BLAST of CmoCh16G008600 vs. NCBI nr
Match: KAA0046872.1 (uncharacterized protein E6C27_scaffold230G00270 [Cucumis melo var. makuwa] >TYK03274.1 uncharacterized protein E5676_scaffold298G001010 [Cucumis melo var. makuwa]) HSP 1 Score: 215.7 bits (548), Expect = 2.6e-52 Identity = 116/148 (78.38%), Postives = 124/148 (83.78%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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