CmoCh16G008590 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh16G008590
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Unknown protein
Location	Cmo_Chr16: 4575698 .. 4578268 (+)
RNA-Seq Expression	CmoCh16G008590
Synteny	CmoCh16G008590

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAGCAGTGAGATTAGAGTTGGGAAAAAGTTATGAACTCTAAATTCCAGCCTCATTTTGTTTCTGTAAATGGAGCAGCGGGAGCCACTGGATAACGCGGCAGCCGTATACGGAACAGCAACGACATACACCCATCTCACTCTCACACCAGATAATCCATCACGAATTTCTTCTTCTCTGCTTCCTCATATTCCCTTTAATCCCAAATGACAAGTTTCATCAGATTCTCTTCCTTCAACCTACTACACGACAATTTCTACACAAAACCCACCCGATTTAATCCTCTTCCGCCCCCGAAGGTTGCCTCCTGCCACCGAAATGGGTTCCGTTTGAGGCCTTGTCGAGGGAAGTTGCCGTTTCTTAGCGGGGGTTGGGGTAACAATGGGGTTTCGGGAAAATACGGAGTGTTTAAGGGAAAGAGAGGGCTAATTGTAGCAAGGTTTAATCAGGGTTTTGGGTTTAACGGCGGCGGAAGCGGCGGCGGCGGCGGAGACGATGGTGCAACCGCGAGGCTTCTGGGTAATATCGCTTTGGCTGCTGGGTTAACTTACCTTTCAGTAACAGGGCAGCTTGGCTGGATTTTAGATGCGATCGTTTCCATTTGGGTCTGTATTCATCTTCTCTCTTCTCTTGTTTTGATTCTCAAATATTGAATGAGTTTTGATTCTCAAGGATTTGGGAATTTCTTAACCTTCTCAAAGAAACATTGGTTATTTCCTTTAGTGTTCGTCTGTTCGGCTCTTATTAGGACTTGTCCGTGTGATGAAAGGGCAGCTCTTCGTTCACTATTATCTTAATACTTCACTGAAGAGTAGTAATAGGAGCATGTTTATGGCTGGCTTTTGCTATCTCTGCCTTTGAAAACTGATTTCTAATGGGAAAAACATTAAGTTTGTATTGAATTCTCATTTGTTTGCATTCCAGAACTGATTGAAGATGAATTCTTCTTCTTCTGCATTCTTGTGCTTTGTTTTGATCTGCTAACATATATGCATATTCAGCTTGTTGCAGTTCTTGTACCAATTGTTGGAGTGGCCGCTTTTATATGGTGGGCAGGACGAGATATTGTTCAAAGCACTGTAAGTCTGTTATAACTTTTGTATTTTCAATCTCGAAGCTTGAGCTTATGCAACTTCATATGCAACACCTTCTTGCAATTGCAGTGTCCTAACTGTGGAAATGAATTCCAAATATTCAAGTAAGTGTTCTTTAAAGGACTTAATATAAGTTCGGCCTCGTTCGAGATCCCTCGATTCGTTTCGTGCAATTTTCAGCTGTATTAACTAACACACTTCTTTTACTTCCATATTGCAGATCAACTCTGAATGAAGAACTGCAACTATGCCCTTTCTGTAGCCAACCTTTCTCTGGTAAACCCTGAGTTCTTATAGATCATCTTCGAGTTTATATCGTTAGCAGTTTGAGCGATTTACTTCTTCTGGGAACGTTGTTGTTGTTGGATCATGAACTGATTTTACCATTTCCTGATCTATTCATCATGGTTCATTTAGCTTCTTTCTTTTCCTTTTCAAATTCAGTGGTGGATGACAAGTTTGTGAGGGATTCCGTGATGTTCTCCAACAAAACTTCTTCCACCTTTGGACAGGCTTTCAGTGACTTTACTTCTCCCAGAAAAGGTAATTCGTGATGGAGTATATCCCATCCAACATCAAATATTTAATGTTCTTGAAACTGAACTGCCTCTTGTGATTGATTGTAGGGAAGGAAACCTCTGGTGCTGTGGTTGACATAGAAGCTGAAGTAAAAGATGTGGACTGAAGTAGTCTTACTGGCCGTCTTCATTCTGGTATGAAAGTTTGTCGTCGACTGAGTCGATACATTGCTTTGCTTTCTGGTGAACGCTTTCTGATTTAGCCTTTGCACCATCTGTCATTTCTCTATCCTTTAGCGTCGTCTCGCCTTTGCAACTTCAACAAAACGAAAGCTCGTTTTCGCTCTCGTTTTTTTGCTTATTCATCTGAATACCACATAGCAACTTGTAGAGCATAAAACAGCTTACTCCATTTCAAAAACTCCTAAAACGATTGAACCCAGATATCAAAACTTCTAAAACGACTGATCCCAGATCCAAAATCCCAGTTCCTGCAGATTTCAAAATTCCTGGCATTGGTGTTCAACTCAGATCTCTAGGGTTGTGTACTTGTTAGTTTATTTTGTTCATTCTTATTTCATTTCGATTTTACAGGTATTTAGACAACAATGAGATTCTGATTATGATTCCAGTGAAGTCGAGGTAAACACGATCACGATGAGAGGAAAATTTTCATAGATTCTGTATATTGGTTATGTCTTAGGGTGGCAAGAAGAAGTTTCCAGTTCTGAAAGTATAGGAGAATTTGTGAAATGGTTCCACTGTGTATATCCTTATTTGACACAACTATGTTTCATCTACAGTCTTTTACCCTGTAACTTGTGACTAGAAGAACATGAAATCTTTCAATTTTGTTGCTTCACATATTGGGAAATGAACCTTTCTGGTTTGTTTTATTTTTAGATACTTCCCAAGATCGTCGAGAGTATCCATGTTACTTGTAGTTCAACAAAGATCGTGC

mRNA sequence

TAGCAGTGAGATTAGAGTTGGGAAAAAGTTATGAACTCTAAATTCCAGCCTCATTTTGTTTCTGTAAATGGAGCAGCGGGAGCCACTGGATAACGCGGCAGCCGTATACGGAACAGCAACGACATACACCCATCTCACTCTCACACCAGATAATCCATCACGAATTTCTTCTTCTCTGCTTCCTCATATTCCCTTTAATCCCAAATGACAAGTTTCATCAGATTCTCTTCCTTCAACCTACTACACGACAATTTCTACACAAAACCCACCCGATTTAATCCTCTTCCGCCCCCGAAGGTTGCCTCCTGCCACCGAAATGGGTTCCGTTTGAGGCCTTGTCGAGGGAAGTTGCCGTTTCTTAGCGGGGGTTGGGGTAACAATGGGGTTTCGGGAAAATACGGAGTGTTTAAGGGAAAGAGAGGGCTAATTGTAGCAAGGTTTAATCAGGGTTTTGGGTTTAACGGCGGCGGAAGCGGCGGCGGCGGCGGAGACGATGGTGCAACCGCGAGGCTTCTGGGTAATATCGCTTTGGCTGCTGGGTTAACTTACCTTTCAGTAACAGGGCAGCTTGGCTGGATTTTAGATGCGATCGTTTCCATTTGGCTTGTTGCAGTTCTTGTACCAATTGTTGGAGTGGCCGCTTTTATATGGTGGGCAGGACGAGATATTGTTCAAAGCACTTGTCCTAACTGTGGAAATGAATTCCAAATATTCAAATCAACTCTGAATGAAGAACTGCAACTATGCCCTTTCTGTAGCCAACCTTTCTCTGTGGTGGATGACAAGTTTGTGAGGGATTCCGTGATGTTCTCCAACAAAACTTCTTCCACCTTTGGACAGGCTTTCAGTGACTTTACTTCTCCCAGAAAAGGGAAGGAAACCTCTGGTGCTGTGGTTGACATAGAAGCTGAAGTAAAAGATGTGGACTGAAGTAGTCTTACTGGCCGTCTTCATTCTGGTATTTAGACAACAATGAGATTCTGATTATGATTCCAGTGAAGTCGAGGTAAACACGATCACGATGAGAGGAAAATTTTCATAGATTCTGTATATTGGTTATGTCTTAGGGTGGCAAGAAGAAGTTTCCAGTTCTGAAAGTATAGGAGAATTTGTGAAATGGTTCCACTGTGTATATCCTTATTTGACACAACTATGTTTCATCTACAGTCTTTTACCCTGTAACTTGTGACTAGAAGAACATGAAATCTTTCAATTTTGTTGCTTCACATATTGGGAAATGAACCTTTCTGGTTTGTTTTATTTTTAGATACTTCCCAAGATCGTCGAGAGTATCCATGTTACTTGTAGTTCAACAAAGATCGTGC

Coding sequence (CDS)

ATGACAAGTTTCATCAGATTCTCTTCCTTCAACCTACTACACGACAATTTCTACACAAAACCCACCCGATTTAATCCTCTTCCGCCCCCGAAGGTTGCCTCCTGCCACCGAAATGGGTTCCGTTTGAGGCCTTGTCGAGGGAAGTTGCCGTTTCTTAGCGGGGGTTGGGGTAACAATGGGGTTTCGGGAAAATACGGAGTGTTTAAGGGAAAGAGAGGGCTAATTGTAGCAAGGTTTAATCAGGGTTTTGGGTTTAACGGCGGCGGAAGCGGCGGCGGCGGCGGAGACGATGGTGCAACCGCGAGGCTTCTGGGTAATATCGCTTTGGCTGCTGGGTTAACTTACCTTTCAGTAACAGGGCAGCTTGGCTGGATTTTAGATGCGATCGTTTCCATTTGGCTTGTTGCAGTTCTTGTACCAATTGTTGGAGTGGCCGCTTTTATATGGTGGGCAGGACGAGATATTGTTCAAAGCACTTGTCCTAACTGTGGAAATGAATTCCAAATATTCAAATCAACTCTGAATGAAGAACTGCAACTATGCCCTTTCTGTAGCCAACCTTTCTCTGTGGTGGATGACAAGTTTGTGAGGGATTCCGTGATGTTCTCCAACAAAACTTCTTCCACCTTTGGACAGGCTTTCAGTGACTTTACTTCTCCCAGAAAAGGGAAGGAAACCTCTGGTGCTGTGGTTGACATAGAAGCTGAAGTAAAAGATGTGGACTGA

Protein sequence

MTSFIRFSSFNLLHDNFYTKPTRFNPLPPPKVASCHRNGFRLRPCRGKLPFLSGGWGNNGVSGKYGVFKGKRGLIVARFNQGFGFNGGGSGGGGGDDGATARLLGNIALAAGLTYLSVTGQLGWILDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSTCPNCGNEFQIFKSTLNEELQLCPFCSQPFSVVDDKFVRDSVMFSNKTSSTFGQAFSDFTSPRKGKETSGAVVDIEAEVKDVD

Homology

[Close]

BLAST of CmoCh16G008590 vs. ExPASy TrEMBL
Match: A0A6J1EMN9 (uncharacterized protein LOC111435981 OS=Cucurbita moschata OX=3662 GN=LOC111435981 PE=4 SV=1)

HSP 1 Score: 485.3 bits (1248), Expect = 1.4e-133
Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 0


Query: 1   MTSFIRFSSFNLLHDNFYTKPTRFNPLPPPKVASCHRNGFRLRPCRGKLPFLSGGWGNNG 60
           MTSFIRFSSFNLLHDNFYTKPTRFNPLPPPKVASCHRNGFRLRPCRGKLPFLSGGWGNNG
Sbjct: 1   MTSFIRFSSFNLLHDNFYTKPTRFNPLPPPKVASCHRNGFRLRPCRGKLPFLSGGWGNNG 60

Query: 61  VSGKYGVFKGKRGLIVARFNQGFGFNGGGSGGGGGDDGATARLLGNIALAAGLTYLSVTG 120
           VSGKYGVFKGKRGLIVARFNQGFGFNGGGSGGGGGDDGATARLLGNIALAAGLTYLSVTG
Sbjct: 61  VSGKYGVFKGKRGLIVARFNQGFGFNGGGSGGGGGDDGATARLLGNIALAAGLTYLSVTG 120

Query: 121 QLGWILDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSTCPNCGNEFQIFKSTLNEELQL 180
           QLGWILDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSTCPNCGNEFQIFKSTLNEELQL
Sbjct: 121 QLGWILDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSTCPNCGNEFQIFKSTLNEELQL 180

Query: 181 CPFCSQPFSVVDDKFVRDSVMFSNKTSSTFGQAFSDFTSPRKGKETSGAVVDIEAEVKDV 240
           CPFCSQPFSVVDDKFVRDSVMFSNKTSSTFGQAFSDFTSPRKGKETSGAVVDIEAEVKDV
Sbjct: 181 CPFCSQPFSVVDDKFVRDSVMFSNKTSSTFGQAFSDFTSPRKGKETSGAVVDIEAEVKDV 240

Query: 241 D 242
           D
Sbjct: 241 D 241

[Close]

BLAST of CmoCh16G008590 vs. ExPASy TrEMBL
Match: A0A6J1JCT5 (uncharacterized protein LOC111483302 OS=Cucurbita maxima OX=3661 GN=LOC111483302 PE=4 SV=1)

HSP 1 Score: 455.3 bits (1170), Expect = 1.6e-124
Identity = 233/242 (96.28%), Postives = 233/242 (96.28%), Query Frame = 0


Query: 1   MTSFIRFSSFN-LLHDNFYTKPTRFNPLPPPKVASCHRNGFRLRPCRGKLPFLSGGWGNN 60
           MTSFIRFSSFN LLHDNFY KPTRFNPLPPPKVASC RNGFRLR C GKLPFLSGGW N 
Sbjct: 1   MTSFIRFSSFNLLLHDNFYKKPTRFNPLPPPKVASCDRNGFRLRLCGGKLPFLSGGWSNK 60

Query: 61  GVSGKYGVFKGKRGLIVARFNQGFGFNGGGSGGGGGDDGATARLLGNIALAAGLTYLSVT 120
           GV GKYGVFKGKRGLIVARFNQGFGFNGGG GGGGGDDGATARLLGNIALAAGLTYLSVT
Sbjct: 61  GVLGKYGVFKGKRGLIVARFNQGFGFNGGG-GGGGGDDGATARLLGNIALAAGLTYLSVT 120

Query: 121 GQLGWILDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSTCPNCGNEFQIFKSTLNEELQ 180
           GQLGWILDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSTCPNCGNEFQIFKSTLNEELQ
Sbjct: 121 GQLGWILDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSTCPNCGNEFQIFKSTLNEELQ 180

Query: 181 LCPFCSQPFSVVDDKFVRDSVMFSNKTSSTFGQAFSDFTSPRKGKETSGAVVDIEAEVKD 240
           LCPFCSQPFSVVDDKFVRDSVMFSNKTSSTFGQAFSDFTSPRKGKETSGAVVDIEAEVKD
Sbjct: 181 LCPFCSQPFSVVDDKFVRDSVMFSNKTSSTFGQAFSDFTSPRKGKETSGAVVDIEAEVKD 240

Query: 241 VD 242
           VD
Sbjct: 241 VD 241

[Close]

BLAST of CmoCh16G008590 vs. ExPASy TrEMBL
Match: A0A0A0L5A4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G099750 PE=4 SV=1)

HSP 1 Score: 399.1 bits (1024), Expect = 1.4e-107
Identity = 208/246 (84.55%), Postives = 218/246 (88.62%), Query Frame = 0


Query: 1   MTSFIRFSSFNLLHDNFYTKPTRFNPLPPPKVASCHRNGFRLRPCRGKLPFLSGGWGNNG 60
           MTSFIRFS+FN+LH+NF  KPT+FNPLPPPKV  C  +G RLR    +L F  GGW +  
Sbjct: 1   MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVFCKPSGLRLRFYGWRLLFPGGGWVDQR 60

Query: 61  VSGKYGVFKGKRG-LIVARFNQGFGFNG----GGSGGGGGDDGATARLLGNIALAAGLTY 120
           V GK+G FKGKRG LIVARFNQGFGFNG    GG GG GGDDGATARL+GNIALAAGLTY
Sbjct: 61  VFGKHGGFKGKRGRLIVARFNQGFGFNGGGGDGGDGGDGGDDGATARLVGNIALAAGLTY 120

Query: 121 LSVTGQLGWILDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSTCPNCGNEFQIFKSTLN 180
           LSVTGQLGW+LDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQS CPNCGNEFQIFKSTLN
Sbjct: 121 LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLN 180

Query: 181 EELQLCPFCSQPFSVVDDKFVRDSVMFSNKTSSTFGQAFSDFTSPRKGKETSGAVVDIEA 240
           EELQLCPFCSQPFSVVDDKFVRDSV FSNKTSSTFGQAFSDFTSPRKGKETSGAVVDIEA
Sbjct: 181 EELQLCPFCSQPFSVVDDKFVRDSVKFSNKTSSTFGQAFSDFTSPRKGKETSGAVVDIEA 240

Query: 241 EVKDVD 242
           EVKDVD
Sbjct: 241 EVKDVD 246

[Close]

BLAST of CmoCh16G008590 vs. ExPASy TrEMBL
Match: A0A6J1CP68 (uncharacterized protein LOC111012900 OS=Momordica charantia OX=3673 GN=LOC111012900 PE=4 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 8.8e-107
Identity = 203/241 (84.23%), Postives = 216/241 (89.63%), Query Frame = 0


Query: 1   MTSFIRFSSFNLLHDNFYTKPTRFNPLPPPKVASCHRNGFRLRPCRGKLPFLSGGWGNNG 60
           MTS IRFS+FN+LHD+F  KPTRF+PLP  KV  C+RNGFRLR    +L FL G  GN G
Sbjct: 1   MTSIIRFSTFNILHDHFCKKPTRFSPLPARKVGFCNRNGFRLRAYGWRLTFLGGSCGNEG 60

Query: 61  VSGKYGVFKGKRGLIVARFNQGFGFNGGGSGGGGGDDGATARLLGNIALAAGLTYLSVTG 120
           + GK   FKG+RGLIVARFNQGFGFNGGG GGGGGDDGATAR+LGNIALA GLTYLSVTG
Sbjct: 61  IFGKDLGFKGRRGLIVARFNQGFGFNGGG-GGGGGDDGATARILGNIALAVGLTYLSVTG 120

Query: 121 QLGWILDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSTCPNCGNEFQIFKSTLNEELQL 180
           QLGW+LDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQ TCPNCGN+FQIFKSTLNEELQL
Sbjct: 121 QLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQGTCPNCGNDFQIFKSTLNEELQL 180

Query: 181 CPFCSQPFSVVDDKFVRDSVMFSNKTSSTFGQAFSDFTSPRKGKETSGAVVDIEAEVKDV 240
           CPFCSQPFSVVDDKFVRDSV FSNKTSSTFGQAFS+FTSP+KGKETS AVVDIEAEVKDV
Sbjct: 181 CPFCSQPFSVVDDKFVRDSVKFSNKTSSTFGQAFSNFTSPKKGKETSAAVVDIEAEVKDV 240

Query: 241 D 242
           D
Sbjct: 241 D 240

[Close]

BLAST of CmoCh16G008590 vs. ExPASy TrEMBL
Match: A0A5A7TVG5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G001050 PE=4 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 4.4e-106
Identity = 206/242 (85.12%), Postives = 215/242 (88.84%), Query Frame = 0


Query: 1   MTSFIRFSSFNLLHDNFYTKPTRFNPLPPPKVASCHRNGFRLRPCRGKLPFLSGGWGNNG 60
           MTSFIRFS+FN+LH+NF  KPT+FNPLPPPKV  C+ +G RLR    +L F  GGW    
Sbjct: 1   MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVICNPSGLRLRFYGRRLFFPGGGWVEQR 60

Query: 61  VSGKYGVFKGKRG-LIVARFNQGFGFNGGGSGGGGGDDGATARLLGNIALAAGLTYLSVT 120
           V GK+  FKGKRG LIVARFNQGFGFNGG  GG GGDDGATARLLGNIALAAGLTYLSVT
Sbjct: 61  VFGKHRGFKGKRGRLIVARFNQGFGFNGG--GGDGGDDGATARLLGNIALAAGLTYLSVT 120

Query: 121 GQLGWILDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSTCPNCGNEFQIFKSTLNEELQ 180
           GQLGW+LDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQS CPNCGNEFQIFKSTLNEELQ
Sbjct: 121 GQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLNEELQ 180

Query: 181 LCPFCSQPFSVVDDKFVRDSVMFSNKTSSTFGQAFSDFTSPRKGKETSGAVVDIEAEVKD 240
           LCPFCSQPFSVVDDKFVRDSV FS KTSSTFGQAFSDFTSPRKGKETSGAVVDIEAEVKD
Sbjct: 181 LCPFCSQPFSVVDDKFVRDSVTFSKKTSSTFGQAFSDFTSPRKGKETSGAVVDIEAEVKD 240

Query: 241 VD 242
           VD
Sbjct: 241 VD 240

[Close]

BLAST of CmoCh16G008590 vs. NCBI nr
Match: XP_022929397.1 (uncharacterized protein LOC111435981 [Cucurbita moschata])

HSP 1 Score: 485.3 bits (1248), Expect = 3.0e-133
Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 0


Query: 1   MTSFIRFSSFNLLHDNFYTKPTRFNPLPPPKVASCHRNGFRLRPCRGKLPFLSGGWGNNG 60
           MTSFIRFSSFNLLHDNFYTKPTRFNPLPPPKVASCHRNGFRLRPCRGKLPFLSGGWGNNG
Sbjct: 1   MTSFIRFSSFNLLHDNFYTKPTRFNPLPPPKVASCHRNGFRLRPCRGKLPFLSGGWGNNG 60

Query: 61  VSGKYGVFKGKRGLIVARFNQGFGFNGGGSGGGGGDDGATARLLGNIALAAGLTYLSVTG 120
           VSGKYGVFKGKRGLIVARFNQGFGFNGGGSGGGGGDDGATARLLGNIALAAGLTYLSVTG
Sbjct: 61  VSGKYGVFKGKRGLIVARFNQGFGFNGGGSGGGGGDDGATARLLGNIALAAGLTYLSVTG 120

Query: 121 QLGWILDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSTCPNCGNEFQIFKSTLNEELQL 180
           QLGWILDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSTCPNCGNEFQIFKSTLNEELQL
Sbjct: 121 QLGWILDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSTCPNCGNEFQIFKSTLNEELQL 180

Query: 181 CPFCSQPFSVVDDKFVRDSVMFSNKTSSTFGQAFSDFTSPRKGKETSGAVVDIEAEVKDV 240
           CPFCSQPFSVVDDKFVRDSVMFSNKTSSTFGQAFSDFTSPRKGKETSGAVVDIEAEVKDV
Sbjct: 181 CPFCSQPFSVVDDKFVRDSVMFSNKTSSTFGQAFSDFTSPRKGKETSGAVVDIEAEVKDV 240

Query: 241 D 242
           D
Sbjct: 241 D 241

[Close]

BLAST of CmoCh16G008590 vs. NCBI nr
Match: KAG7015466.1 (hypothetical protein SDJN02_23102 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 481.5 bits (1238), Expect = 4.3e-132
Identity = 240/241 (99.59%), Postives = 240/241 (99.59%), Query Frame = 0


Query: 1   MTSFIRFSSFNLLHDNFYTKPTRFNPLPPPKVASCHRNGFRLRPCRGKLPFLSGGWGNNG 60
           MTSFIRFSSFNLLHDNFYTKPTRFNPLPPPKVASCHRNGFRLR CRGKLPFLSGGWGNNG
Sbjct: 1   MTSFIRFSSFNLLHDNFYTKPTRFNPLPPPKVASCHRNGFRLRLCRGKLPFLSGGWGNNG 60

Query: 61  VSGKYGVFKGKRGLIVARFNQGFGFNGGGSGGGGGDDGATARLLGNIALAAGLTYLSVTG 120
           VSGKYGVFKGKRGLIVARFNQGFGFNGGGSGGGGGDDGATARLLGNIALAAGLTYLSVTG
Sbjct: 61  VSGKYGVFKGKRGLIVARFNQGFGFNGGGSGGGGGDDGATARLLGNIALAAGLTYLSVTG 120

Query: 121 QLGWILDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSTCPNCGNEFQIFKSTLNEELQL 180
           QLGWILDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSTCPNCGNEFQIFKSTLNEELQL
Sbjct: 121 QLGWILDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSTCPNCGNEFQIFKSTLNEELQL 180

Query: 181 CPFCSQPFSVVDDKFVRDSVMFSNKTSSTFGQAFSDFTSPRKGKETSGAVVDIEAEVKDV 240
           CPFCSQPFSVVDDKFVRDSVMFSNKTSSTFGQAFSDFTSPRKGKETSGAVVDIEAEVKDV
Sbjct: 181 CPFCSQPFSVVDDKFVRDSVMFSNKTSSTFGQAFSDFTSPRKGKETSGAVVDIEAEVKDV 240

Query: 241 D 242
           D
Sbjct: 241 D 241

[Close]

BLAST of CmoCh16G008590 vs. NCBI nr
Match: XP_023552443.1 (uncharacterized protein LOC111810103 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 475.7 bits (1223), Expect = 2.4e-130
Identity = 237/241 (98.34%), Postives = 239/241 (99.17%), Query Frame = 0


Query: 1   MTSFIRFSSFNLLHDNFYTKPTRFNPLPPPKVASCHRNGFRLRPCRGKLPFLSGGWGNNG 60
           MTSFIRFSSFNLLHDNFYTKPTRFNPLPPPKVASCHRNGFRLR C GKLPFLSGGWGNNG
Sbjct: 1   MTSFIRFSSFNLLHDNFYTKPTRFNPLPPPKVASCHRNGFRLRLCGGKLPFLSGGWGNNG 60

Query: 61  VSGKYGVFKGKRGLIVARFNQGFGFNGGGSGGGGGDDGATARLLGNIALAAGLTYLSVTG 120
           VSGKYGVFKG+RGLIVARF+QGFGFNGGGSGGGGGDDGATARLLGNIALAAGLTYLSVTG
Sbjct: 61  VSGKYGVFKGRRGLIVARFDQGFGFNGGGSGGGGGDDGATARLLGNIALAAGLTYLSVTG 120

Query: 121 QLGWILDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSTCPNCGNEFQIFKSTLNEELQL 180
           QLGWILDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSTCPNCGNEFQIFKSTLNEELQL
Sbjct: 121 QLGWILDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSTCPNCGNEFQIFKSTLNEELQL 180

Query: 181 CPFCSQPFSVVDDKFVRDSVMFSNKTSSTFGQAFSDFTSPRKGKETSGAVVDIEAEVKDV 240
           CPFCSQPFSVVDDKFVRDSVMFSNKTSSTFGQAFSDFTSPRKGKETSGAVVDIEAEVKDV
Sbjct: 181 CPFCSQPFSVVDDKFVRDSVMFSNKTSSTFGQAFSDFTSPRKGKETSGAVVDIEAEVKDV 240

Query: 241 D 242
           D
Sbjct: 241 D 241

[Close]

BLAST of CmoCh16G008590 vs. NCBI nr
Match: KAG6577389.1 (hypothetical protein SDJN03_24963, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 462.2 bits (1188), Expect = 2.7e-126
Identity = 229/230 (99.57%), Postives = 229/230 (99.57%), Query Frame = 0


Query: 1   MTSFIRFSSFNLLHDNFYTKPTRFNPLPPPKVASCHRNGFRLRPCRGKLPFLSGGWGNNG 60
           MTSFIRFSSFNLLHDNFYTKPTRFNPLPPPKVASCHRNGFRLR CRGKLPFLSGGWGNNG
Sbjct: 1   MTSFIRFSSFNLLHDNFYTKPTRFNPLPPPKVASCHRNGFRLRLCRGKLPFLSGGWGNNG 60

Query: 61  VSGKYGVFKGKRGLIVARFNQGFGFNGGGSGGGGGDDGATARLLGNIALAAGLTYLSVTG 120
           VSGKYGVFKGKRGLIVARFNQGFGFNGGGSGGGGGDDGATARLLGNIALAAGLTYLSVTG
Sbjct: 61  VSGKYGVFKGKRGLIVARFNQGFGFNGGGSGGGGGDDGATARLLGNIALAAGLTYLSVTG 120

Query: 121 QLGWILDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSTCPNCGNEFQIFKSTLNEELQL 180
           QLGWILDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSTCPNCGNEFQIFKSTLNEELQL
Sbjct: 121 QLGWILDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSTCPNCGNEFQIFKSTLNEELQL 180

Query: 181 CPFCSQPFSVVDDKFVRDSVMFSNKTSSTFGQAFSDFTSPRKGKETSGAV 231
           CPFCSQPFSVVDDKFVRDSVMFSNKTSSTFGQAFSDFTSPRKGKETSGAV
Sbjct: 181 CPFCSQPFSVVDDKFVRDSVMFSNKTSSTFGQAFSDFTSPRKGKETSGAV 230

[Close]

BLAST of CmoCh16G008590 vs. NCBI nr
Match: XP_022985259.1 (uncharacterized protein LOC111483302 [Cucurbita maxima])

HSP 1 Score: 455.3 bits (1170), Expect = 3.3e-124
Identity = 233/242 (96.28%), Postives = 233/242 (96.28%), Query Frame = 0


Query: 1   MTSFIRFSSFN-LLHDNFYTKPTRFNPLPPPKVASCHRNGFRLRPCRGKLPFLSGGWGNN 60
           MTSFIRFSSFN LLHDNFY KPTRFNPLPPPKVASC RNGFRLR C GKLPFLSGGW N 
Sbjct: 1   MTSFIRFSSFNLLLHDNFYKKPTRFNPLPPPKVASCDRNGFRLRLCGGKLPFLSGGWSNK 60

Query: 61  GVSGKYGVFKGKRGLIVARFNQGFGFNGGGSGGGGGDDGATARLLGNIALAAGLTYLSVT 120
           GV GKYGVFKGKRGLIVARFNQGFGFNGGG GGGGGDDGATARLLGNIALAAGLTYLSVT
Sbjct: 61  GVLGKYGVFKGKRGLIVARFNQGFGFNGGG-GGGGGDDGATARLLGNIALAAGLTYLSVT 120

Query: 121 GQLGWILDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSTCPNCGNEFQIFKSTLNEELQ 180
           GQLGWILDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSTCPNCGNEFQIFKSTLNEELQ
Sbjct: 121 GQLGWILDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSTCPNCGNEFQIFKSTLNEELQ 180

Query: 181 LCPFCSQPFSVVDDKFVRDSVMFSNKTSSTFGQAFSDFTSPRKGKETSGAVVDIEAEVKD 240
           LCPFCSQPFSVVDDKFVRDSVMFSNKTSSTFGQAFSDFTSPRKGKETSGAVVDIEAEVKD
Sbjct: 181 LCPFCSQPFSVVDDKFVRDSVMFSNKTSSTFGQAFSDFTSPRKGKETSGAVVDIEAEVKD 240

Query: 241 VD 242
           VD
Sbjct: 241 VD 241

[Close]

BLAST of CmoCh16G008590 vs. TAIR 10
Match: AT4G27390.1 (unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 209.9 bits (533), Expect = 2.2e-54
Identity = 114/188 (60.64%), Postives = 141/188 (75.00%), Query Frame = 0


Query: 55  GWGNNGVSGKYGVFKGKRGLIVARFNQGFGFNGGGSGGGGGDDGATARLLGNIALAAGLT 114
           G G+ G+         KR ++  R   G  FNGG + G G       R+LGN+ALA GLT
Sbjct: 59  GLGDIGMLASEKSLNRKRRVVRVR---GLKFNGGDNNGNG-------RILGNLALAIGLT 118

Query: 115 YLSVTGQLGWILDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSTCPNCGNEFQIFKSTL 174
           YLS+TGQLGWILDAIVS+WL+ V+VPI+G+ AF WWA RDIVQS CPNCGNEFQIFKS +
Sbjct: 119 YLSMTGQLGWILDAIVSVWLIVVIVPILGLGAFFWWAQRDIVQSNCPNCGNEFQIFKSAM 178

Query: 175 NEELQLCPFCSQPFSVVDDKFVRDSVMFSNKTSSTFGQAFSDFTS-PRKGKETSGAVVDI 234
           ++E+QLCPFC+QPFSVVDDKFV++ V FSN+T++ FGQ  + F+S P+KGK +S AVVDI
Sbjct: 179 DDEVQLCPFCTQPFSVVDDKFVKEPVKFSNQTTA-FGQDLNGFSSKPKKGKGSSTAVVDI 235

Query: 235 EAEVKDVD 242
           EAEV D D
Sbjct: 239 EAEVTDAD 235

The following BLAST results are available for this feature:

BLAST of CmoCh16G008590 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh16G008590 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EMN9	1.4e-133	100.00	uncharacterized protein LOC111435981 OS=Cucurbita moschata OX=3662 GN=LOC1114359...	[more]
A0A6J1JCT5	1.6e-124	96.28	uncharacterized protein LOC111483302 OS=Cucurbita maxima OX=3661 GN=LOC111483302...	[more]
A0A0A0L5A4	1.4e-107	84.55	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G099750 PE=4 SV=1	[more]
A0A6J1CP68	8.8e-107	84.23	uncharacterized protein LOC111012900 OS=Momordica charantia OX=3673 GN=LOC111012...	[more]
A0A5A7TVG5	4.4e-106	85.12	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of CmoCh16G008590 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022929397.1	3.0e-133	100.00	uncharacterized protein LOC111435981 [Cucurbita moschata]	[more]
KAG7015466.1	4.3e-132	99.59	hypothetical protein SDJN02_23102 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023552443.1	2.4e-130	98.34	uncharacterized protein LOC111810103 [Cucurbita pepo subsp. pepo]	[more]
KAG6577389.1	2.7e-126	99.57	hypothetical protein SDJN03_24963, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022985259.1	3.3e-124	96.28	uncharacterized protein LOC111483302 [Cucurbita maxima]	[more]

BLAST of CmoCh16G008590 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G27390.1	2.2e-54	60.64	unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplas...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36785	OS05G0502500 PROTEIN	coord: 9..241

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh16G008590.1	CmoCh16G008590.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane