CmoCh16G008310 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh16G008310
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	KH domain-containing protein
Location	Cmo_Chr16: 4370996 .. 4375303 (-)
RNA-Seq Expression	CmoCh16G008310
Synteny	CmoCh16G008310

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

NNCCCCCCCCCCCCTTTCTTTCTGCAAAGGTACGCTTCTTTCTCTATCTGGGTCGCTCTGTTCTTCGTTGGATATCTTAATTTCACTCTTCTTCTCCACTTATTAACCCAATTCCACTTCTGGGTTTCTTCTATTTTGTTGTGTTCTTCAGTTTATGCGTTATGGGGGAGAGAACCCCACCTGGGAGTTACTTCCATTACCCTCCCCCTTCTGCCCATGCATCCCCTCACAGGACTCCTTCCATTCCCTTAGATCGGGAGAGGTAATTTCCCTTTCTCTGTTTCTCAATTCTTCATCATGATTTGCTTTTTGTTTTGTTTTTTTTTGTTTTTTGGACTGCTTGATTCAGATTCCTTGTTTGATTGATCATGTCATTCTGTTTTTATCCCACTTTTTAACTCTCTTGTGTTGGTTTGATCATCTTTGTCATTGCATTTGAATACTGACTAGAAGCCCTATTGAGCTTTTAGTGATGTTGTGTTGTGTGACAATGGCAGATATCTAGCTGAATTACTGTCAGAGAGACAGAAGTTGGGTCCCTTTGTGCAAGTTTTACCTCATTGTAGCAGACTTTTGAATCAAGGTGGGGTTATAAGATCTCTACTATTGCATTATGTTGTTGCAATACTTATTATTGTTTCTTGTAGTTTGGATTATTTGTTCCTTTGAAGTTTATTATGGGTAGACACTGTTTTCTTGATCATTTGAACAAATTTAATTACAACCGAGCATACGATTAGAGAAGCAAACGAGTAACGATCAATTGGGAAGAAGTTTTTTACTCCCTCGACTCGAGAATGGACTGGTATGTGAATTATATATCGAAAATACATGAGATTAGATGATCGGAACTGAAGTTTCGTGGAGAGGCTACGAACAAGGGGACATTTTGTGGCTATGTATTGCAATGGGAATGTTGTCTGAGGAGAGGTTGGAAGTCAGTCTTTGTGACACGGAGTTAAGCGTTCTCATTGTTTGTTGGCAGCTATTAAATACTAGCCTTATCTTATATCATTGAGTTGTAATGTGGGTCGGGTCAATCTAAGTTTAAGCTTAGCCTGTTATTAGAGCTAGACACTGGGTGGTGTGCTAGCGAGGACGATGGGCCTCCAAGGAGGGTGGGTTGTGAAATCCCACATCGGTTGGAGAGGGGAACGAAGCATTCCTTATAAGGGTGTGGAAACCTCTTCCTAGTAGACTTGTTCTAAAAACCTTGAGGGAATGCTCGGAAGGGAAACCCCAAAGAGGACAATATCTGCTAGCGGTGGGCTTGAGCGGTTACACTAAGGCCTACTATGTCCAAGAGCGTTTCATTTTCTCTGTGTGGATGGAGCCAAAGATGAATCCTATTGGCCTACTCGATACTTTGTCAAGTCGTAATTAATTAGACAAAATCAATTACCATAAGATGACGTTAACTTGTGATGATGTCATGAATCTGAGACATGAGACATGAGACATGATCGTGAGAAAAGTTCCCAATGACGGGTAATTTTTCATGAATAGCTAGCCATTTATCTTCGGAGTCGTCATCTTACACGAGTATTTGCTTAGTCAGTTGCATGTGCACTCCTTATATAAGACGAGCATTTTCTTAGTCAATTGCATGTGCACGCCTTATTTATTACATCTCATTTCAGAGATCAGACGTCTATCGGGCCTTAATCAAACTTCTGTGGATCATGAGAGATTTGAGCACGGGAGTCCTTACCGGTCACTAGGTCAGCTCTCGAATGGAAGACCAATGGACTTGGAAGGTTGGCCTCCAATGCAAATGGAGGTAAATATATATTTGTCCTTGATCTACTTCTTTTCCGTGTTGCTAGTTTTTCGATATGAACGCTTTCTCGTTGATCCCTATTTTCTTTGTATAAGGATATTTTTCTAAAAATGGAAAACTTAATTTTCTTTTAAATGAATGAAAGAATACAATACAGAAAGACAATAGCCTAGATTCGAGATACAAGTGTTTCGAGTTATTAAATTTTCATCTCGAGGGCTTGAATTCAGACCTTTGTAGGGTATCTCCAAACATCCCGAGCCATTACTACTGGGGAATTCCTTGGTTCTAACCTATGTATCCTTAAAATAGAATAAGTAGTTCTTCGTGTTTTGAAACAGAACCATAGAATAAGTAACGTATCTATGACAACATGTGTGCAACACTTGGACACTCTATGTAACAACCTAAGCTCACCGCTAGCAGATATTGTCCTTTTGGTCTTTCCCTTTCGGGTTTCCCTTCAAGGTTTGGACACTCTATGTAACAACCTAAGCTCACCGCTAGCAGATATTGTCCTTTTGGTCTTTCCCTTTCGGGTTTCCCTTCAAGGTTTGGACACTCTATGTAACAGCCTAAGCTCACCGCTAGCAGATATTGTCCTTTTGGTCTTTCCCTTTCGGGTTTCCCTTCAAGGTTTGGACACTCTATGTAACAGCCTAAGCCCACCGCTAGCCAATATTGTCCTTTTGGTCTTTCCCTTTCGGGTTTCCCTCCAAGGTTTGGACACTCTATGTAATAGCCTAAGCCCACCACTAGCCAATATTGTCCTTTTGGTCTTTCCCTTTCGGGTTTCCCTCCAAGGTTTGGACACTCTATGTAACAGCCTAAGTCCACCACTAGCAGATATTGTCCTCTTTGGGCATTCCCTCAAAGTTTTTAAAACGCGTTTGCTAGGGAGAGGTTTCCACACTCTTATAAAGAATGGCTCGTTCTCCTCCCCAATCGATGTGGGATCTCATAATAAATAGACACGAACGGTAATAGAACAAAAATTAATAGATTTTTGGAGTGAAATACATCAAACTCATACAGGCATACATTTCAATAAATGTGTACTTGTTGTATCCGTGTCCTTGATTTTTTTTAGAAAACCCGTGCTTAATGACATGTTTACGGCAGGGAAGTGGACATGTCCATGGTATGGGTTCCCTTCAAGCTCACTCAATGGGTTGGCCAAGGGTGCAAGGAGGAATTCCTGCTACGCCGATAGTTAAAAGAGTCGTTAGACTTGATGTACCTGTTGACAAATATCCAAACGTGAGTCGATATTCTTACGTTAGGTGATGATATTACTGACCTTTTGCCTCTCTGATGTTCATAGTTTGTTGCTTAAATCATGTCAGTATAACTTCGTTGGACGACTTCTCGGACCGCGCGGAAACTCCTTGAAAAGAGTCGAAGCCTTAACGGAATGTCGGGTGTACATAAGAGGCAAGGGCTCCATCAAGGATGCTTTGGAGGTACTAAAAGTTTTGAATCTCCTAGTCCTAACTTAAATCTTCAATAGTACTTACAATGGATCTGAATGTTGTGTGCTTTAGGAAGAGAAACTAAAGGACAAGCCTGGATATGAGCATCTTAATGAACCCTTGCATCTGTTGGTTGAGGCAGAATTCCCGGAGGATACGATAAACTCGCGCTTGGATCATGCCGTAGCCGTTTTAGAGAGCCTATTGAAGCCTGTGGTATGAACTAAACAACGCCCACATCGACTAAACCTCTGATCGTTTTATTATGAAGTCGTGTTCTTATGGAGTTGTTGTGTATTCCAGGATGAATTGCTTGATCAATATAAGAAGCAACAACTAAGAGAACTCGCATTACTAAATGGCACCCTAAGGGAGGAAAGTCCGAGTATGAGCCCGAGCATGTCGCCGTTTAACAGCACGGGACTGAAACGGGCCAAGACAGGGAGGTAAGGTAAGGTAAGGTAAGGTAAGGTAAGGAGTAATGACGAGCTTCGTGGTCGACACTGTGTCGGTTGAAACCACCTTGAGAGCTTTTGGTGCCTTCTTGTCTTCAGCAGATGGTCAAGAATTTTGCTGATTTTGCTGTGCTAAATCTGATAGATAGGCTTATGTTATGCTATTTGGCTGACCACTTTTTCCCTAATATGGGAGGGAAGGAGAACCCCCTCCCCCCAATTCAACATTTTTTCATTTTTTTTTTTTTTTTTTTTTTTTTACCCTTTTCTCTAAGGTAGCTATTTAATTTAGGTTAAATTATAAGTGCACCCCCATAAACTTTAATCATTATGCCAATTTAGTTCTTAAATTTTTATCCAATGATTCACTACGTCGTGTTAAATATTATCTATATTTCTTCGGTGGTAGGGCTATGTACATACCTTTGTTGATGCATGGCGGCAAAGTCGATAGAGACGGAGATTGAAATGAATCGATGAAATTTAACTGTTTAACTAATTAGAAAGTTGAAGGAGACGAGATAAAACTCAAGATGAAGGGAATCGAAAGGGTTTTAAGGAAAATTCAATGAACCTACTTAGTTTCAACCTCACGAATTAC

mRNA sequence

NNCCCCCCCCCCCCTTTCTTTCTGCAAAGTTTATGCGTTATGGGGGAGAGAACCCCACCTGGGAGTTACTTCCATTACCCTCCCCCTTCTGCCCATGCATCCCCTCACAGGACTCCTTCCATTCCCTTAGATCGGGAGAGATATCTAGCTGAATTACTGTCAGAGAGACAGAAGTTGGGTCCCTTTGTGCAAGTTTTACCTCATTGTAGCAGACTTTTGAATCAAGAGATCAGACGTCTATCGGGCCTTAATCAAACTTCTGTGGATCATGAGAGATTTGAGCACGGGAGTCCTTACCGGTCACTAGGTCAGCTCTCGAATGGAAGACCAATGGACTTGGAAGGTTGGCCTCCAATGCAAATGGAGGGAAGTGGACATGTCCATGGTATGGGTTCCCTTCAAGCTCACTCAATGGGTTGGCCAAGGGTGCAAGGAGGAATTCCTGCTACGCCGATAGTTAAAAGAGTCGTTAGACTTGATGTACCTGTTGACAAATATCCAAACTATAACTTCGTTGGACGACTTCTCGGACCGCGCGGAAACTCCTTGAAAAGAGTCGAAGCCTTAACGGAATGTCGGGTGTACATAAGAGGCAAGGGCTCCATCAAGGATGCTTTGGAGGAAGAGAAACTAAAGGACAAGCCTGGATATGAGCATCTTAATGAACCCTTGCATCTGTTGGTTGAGGCAGAATTCCCGGAGGATACGATAAACTCGCGCTTGGATCATGCCGTAGCCGTTTTAGAGAGCCTATTGAAGCCTGTGGATGAATTGCTTGATCAATATAAGAAGCAACAACTAAGAGAACTCGCATTACTAAATGGCACCCTAAGGGAGGAAAGTCCGAGTATGAGCCCGAGCATGTCGCCGTTTAACAGCACGGGACTGAAACGGGCCAAGACAGGGAGGGCTATGTACATACCTTTGTTGATGCATGGCGGCAAAGTCGATAGAGACGGAGATTGAAATGAATCGATGAAATTTAACTGTTTAACTAATTAGAAAGTTGAAGGAGACGAGATAAAACTCAAGATGAAGGGAATCGAAAGGGTTTTAAGGAAAATTCAATGAACCTACTTAGTTTCAACCTCACGAATTAC

Coding sequence (CDS)

ATGGGGGAGAGAACCCCACCTGGGAGTTACTTCCATTACCCTCCCCCTTCTGCCCATGCATCCCCTCACAGGACTCCTTCCATTCCCTTAGATCGGGAGAGATATCTAGCTGAATTACTGTCAGAGAGACAGAAGTTGGGTCCCTTTGTGCAAGTTTTACCTCATTGTAGCAGACTTTTGAATCAAGAGATCAGACGTCTATCGGGCCTTAATCAAACTTCTGTGGATCATGAGAGATTTGAGCACGGGAGTCCTTACCGGTCACTAGGTCAGCTCTCGAATGGAAGACCAATGGACTTGGAAGGTTGGCCTCCAATGCAAATGGAGGGAAGTGGACATGTCCATGGTATGGGTTCCCTTCAAGCTCACTCAATGGGTTGGCCAAGGGTGCAAGGAGGAATTCCTGCTACGCCGATAGTTAAAAGAGTCGTTAGACTTGATGTACCTGTTGACAAATATCCAAACTATAACTTCGTTGGACGACTTCTCGGACCGCGCGGAAACTCCTTGAAAAGAGTCGAAGCCTTAACGGAATGTCGGGTGTACATAAGAGGCAAGGGCTCCATCAAGGATGCTTTGGAGGAAGAGAAACTAAAGGACAAGCCTGGATATGAGCATCTTAATGAACCCTTGCATCTGTTGGTTGAGGCAGAATTCCCGGAGGATACGATAAACTCGCGCTTGGATCATGCCGTAGCCGTTTTAGAGAGCCTATTGAAGCCTGTGGATGAATTGCTTGATCAATATAAGAAGCAACAACTAAGAGAACTCGCATTACTAAATGGCACCCTAAGGGAGGAAAGTCCGAGTATGAGCCCGAGCATGTCGCCGTTTAACAGCACGGGACTGAAACGGGCCAAGACAGGGAGGGCTATGTACATACCTTTGTTGATGCATGGCGGCAAAGTCGATAGAGACGGAGATTGA

Protein sequence

MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLLNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHGMGSLQAHSMGWPRVQGGIPATPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKPVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGRAMYIPLLMHGGKVDRDGD

Homology

[Close]

BLAST of CmoCh16G008310 vs. ExPASy Swiss-Prot
Match: Q8GWR3 (KH domain-containing protein At1g09660/At1g09670 OS=Arabidopsis thaliana OX=3702 GN=At1g09660/At1g09670 PE=2 SV=1)

HSP 1 Score: 361.7 bits (927), Expect = 8.3e-99
Identity = 190/295 (64.41%), Postives = 227/295 (76.95%), Query Frame = 0


Query: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL 60
           M ER  PGS+F YP     ASP+R+P  P DRERYL ELL ERQKLGPF+QV+P+C RLL
Sbjct: 11  MEERISPGSFFQYPLSGFRASPNRSPCPPSDRERYLTELLQERQKLGPFLQVMPNCCRLL 70

Query: 61  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHGMGSL 120
           N EIRR+S       D +R+EHGSP+RSLGQ +NG+ +DLEGW  MQ E + H+      
Sbjct: 71  NHEIRRVSSF----PDLDRYEHGSPFRSLGQPTNGK-LDLEGWSMMQAEENCHLQRASPF 130

Query: 121 QAHS-MGWPRVQGGIPATPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTEC 180
           +  S +GW  +  G+P  PIVK+V+RLDVPVDKYP+YNFVGR+LGPRGNSLKRVE  T C
Sbjct: 131 RGPSPVGWIGMP-GLPNPPIVKKVIRLDVPVDKYPSYNFVGRILGPRGNSLKRVELATHC 190

Query: 181 RVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLL 240
           RV+IRG+GS+KD ++EEKLK KPGYEHL EPLH+L+EAE PED INSRL+HAV  LESLL
Sbjct: 191 RVFIRGRGSVKDTVKEEKLKGKPGYEHLCEPLHVLIEAELPEDIINSRLEHAVHFLESLL 250

Query: 241 KPVDELLDQYKKQQLRELALLNGTLREESPS------MSPSMSPFNSTGLKRAKT 289
           KP+DE +D YK++QL+ELA LNGTLREESPS      +SPSMSPFNS   KRAKT
Sbjct: 251 KPMDESMDHYKREQLKELAALNGTLREESPSPSLSPCLSPSMSPFNS---KRAKT 296

[Close]

BLAST of CmoCh16G008310 vs. ExPASy Swiss-Prot
Match: Q8GYR4 (KH domain-containing protein At3g08620 OS=Arabidopsis thaliana OX=3702 GN=At3g08620 PE=2 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 3.4e-76
Identity = 162/289 (56.06%), Postives = 198/289 (68.51%), Query Frame = 0


Query: 9   SYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLLNQEIRRLS 68
           +Y ++ P  A +   RTPS  +D  +Y+++LL+E QKLGPF+QVLP CSRLLNQEI R++
Sbjct: 6   NYNNFSPSRAASPQIRTPSSDVD-SQYISQLLAEHQKLGPFMQVLPICSRLLNQEIFRIT 65

Query: 69  GL--NQTSVDHERFEH--GSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHGMGSLQAHS 128
           G+  NQ   D +R  H   SP  S   +SN     L GW  +  E  G  HGM      +
Sbjct: 66  GMMPNQGFTDFDRLRHRSPSPMASPNLMSNVSGGGLGGWNGLPPERIGGPHGM------A 125

Query: 129 MGWPRVQGGIPATPI---VKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRV 188
           M W     G PA+P    VKR++RLD+PVD YPN+NFVGRLLGPRGNSLKRVEA T CRV
Sbjct: 126 MEWQ----GAPASPSSYPVKRILRLDLPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRV 185

Query: 189 YIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKP 248
           YIRGKGSIKD  +EEKLK KPGYEHLNE LH+L+EA+ P D ++ +L  A  ++E L+KP
Sbjct: 186 YIRGKGSIKDPEKEEKLKGKPGYEHLNEQLHILIEADLPIDIVDIKLRQAQEIIEELVKP 245

Query: 249 VDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR 291
           VDE  D  K+QQLRELALLN  LRE SP  S S+SPFNS  +KR KTGR
Sbjct: 246 VDESQDYIKRQQLRELALLNSNLRENSPGPSGSVSPFNSNAMKRPKTGR 283

[Close]

BLAST of CmoCh16G008310 vs. ExPASy Swiss-Prot
Match: Q0WLR1 (KH domain-containing protein At4g26480 OS=Arabidopsis thaliana OX=3702 GN=At4g26480 PE=2 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 6.4e-75
Identity = 157/292 (53.77%), Postives = 199/292 (68.15%), Query Frame = 0


Query: 8   GSYFHYP-----PPSAHASPH------RTPSIPLDRERYLAELLSERQKLGPFVQVLPHC 67
           G +  YP     PPSA  SP+        PS  +++E+YL+ELL+ER KL PF+ VLPH 
Sbjct: 23  GRFVTYPPPLSVPPSAPQSPNFSGGLRSQPSFLVEQEKYLSELLAERHKLTPFLPVLPHV 82

Query: 68  SRLLNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHG 127
            RL+NQEI R++ L + ++   RF+H SP  S G   N R  D+ GW   Q      V  
Sbjct: 83  CRLMNQEILRVTTLLENALSQSRFDHPSPLASGGIFQNSR-ADMNGW-ASQFPSERSV-- 142

Query: 128 MGSLQAHSMGWPRVQGGIPATPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEAL 187
             S   + +  P    G+    IVKR +R+D+PVDKYPNYNFVGRLLGPRGNSLKRVEA 
Sbjct: 143 SSSPAPNWLNSPGSSSGL----IVKRTIRVDIPVDKYPNYNFVGRLLGPRGNSLKRVEAS 202

Query: 188 TECRVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLE 247
           T+CRV IRG+GSIKD ++E+ ++ KPGYEHLNEPLH+LVEAE P + +++RL  A  +L+
Sbjct: 203 TDCRVLIRGRGSIKDPIKEDMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILD 262

Query: 248 SLLKPVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKT 289
            LL PV+E  D YKKQQLRELALLNG+LREE   MS S+SP+NS G+KRAKT
Sbjct: 263 DLLTPVEETHDFYKKQQLRELALLNGSLREEGSPMSGSISPYNSLGMKRAKT 306

[Close]

BLAST of CmoCh16G008310 vs. ExPASy Swiss-Prot
Match: Q75GR5 (KH domain-containing protein SPIN1 OS=Oryza sativa subsp. japonica OX=39947 GN=SPIN1 PE=1 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 2.3e-72
Identity = 155/282 (54.96%), Postives = 195/282 (69.15%), Query Frame = 0


Query: 16  PSAHASPHRTPSIPLDRE-RYLAELLSERQKLGPFVQVLPHCSRLLNQEIRRLSGLNQT- 75
           P+ + SP +  S P D + +YLAELL+E QKLGPF+QVLP CS+LL+QEI R+S +    
Sbjct: 11  PARNLSP-QIRSNPTDVDSQYLAELLAEHQKLGPFMQVLPICSKLLSQEIMRVSSIVHNH 70

Query: 76  ---SVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHGMGSLQAHSMGWPRV 135
                D  RF   SP  S    SN        W  +      H   +G  Q  SM W   
Sbjct: 71  GFGDFDRHRFRSPSPMSSPNPRSNRSGNGFSPWNGL------HQERLGFPQGTSMDW--- 130

Query: 136 QGG--IPATPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRVYIRGKGS 195
           QG    P++ +VK+++RLDVPVD YPN+NFVGR+LGPRGNSLKRVEA T CRV+IRGKGS
Sbjct: 131 QGAPPSPSSHVVKKILRLDVPVDSYPNFNFVGRILGPRGNSLKRVEASTGCRVFIRGKGS 190

Query: 196 IKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKPVDELLDQ 255
           IKD  +E+KL+ KPGYEHL++PLH+L+EAEFP   I++RL HA  V+E LLKPVDE  D 
Sbjct: 191 IKDPGKEDKLRGKPGYEHLSDPLHILIEAEFPASIIDARLRHAQEVIEELLKPVDESQDF 250

Query: 256 YKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR 291
           YK+QQLRELA+LN TLRE+SP    S+SPF++ G+KRAKTG+
Sbjct: 251 YKRQQLRELAMLNSTLREDSPHPG-SVSPFSNGGMKRAKTGQ 281

[Close]

BLAST of CmoCh16G008310 vs. ExPASy Swiss-Prot
Match: Q9FKT4 (KH domain-containing protein At5g56140 OS=Arabidopsis thaliana OX=3702 GN=At5g56140 PE=2 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 1.9e-71
Identity = 151/282 (53.55%), Postives = 190/282 (67.38%), Query Frame = 0


Query: 15  PPSAHASPHRT------PSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLLNQEIRRLS 74
           PPSA  SP+ +       S+ +++E+YL+ELL+ER KL PF+ VLPH  RLLNQEI R++
Sbjct: 39  PPSAPQSPNYSGGLRSQSSVFVEQEKYLSELLAERHKLTPFLPVLPHAFRLLNQEILRVT 98

Query: 75  GL--NQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHGMGSLQAHSMG 134
            L  N T +     +H SP  S G   N R  D+ GW              G    +S  
Sbjct: 99  TLLENATVLSQSGLDHPSPLASGGIFQNAR-ADMNGWASQFPSERSVPSSPGPNWLNS-- 158

Query: 135 WPRVQGGIPATPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRVYIRGK 194
            P    G+    I KR +R+D+PVD YPN+NFVGRLLGPRGNSLKRVEA T+CRV IRG+
Sbjct: 159 -PGSSSGL----IAKRTIRVDIPVDNYPNFNFVGRLLGPRGNSLKRVEASTDCRVLIRGR 218

Query: 195 GSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKPVDELL 254
           GSIKD ++EE ++ KPGYEHLNEPLH+LVEAE P + +++RL  A  +L+ LL P++E  
Sbjct: 219 GSIKDPIKEEMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDDLLTPMEETH 278

Query: 255 DQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKT 289
           D YKKQQLRELALLNGTLREE   MS S+SP+NS G+KRAKT
Sbjct: 279 DMYKKQQLRELALLNGTLREEGSPMSGSVSPYNSLGMKRAKT 312

[Close]

BLAST of CmoCh16G008310 vs. ExPASy TrEMBL
Match: A0A6J1EMX9 (KH domain-containing protein At1g09660/At1g09670-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111435962 PE=4 SV=1)

HSP 1 Score: 590.5 bits (1521), Expect = 4.1e-165
Identity = 290/290 (100.00%), Postives = 290/290 (100.00%), Query Frame = 0


Query: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL 60
           MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL
Sbjct: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL 60

Query: 61  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHGMGSL 120
           NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHGMGSL
Sbjct: 61  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHGMGSL 120

Query: 121 QAHSMGWPRVQGGIPATPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR 180
           QAHSMGWPRVQGGIPATPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR
Sbjct: 121 QAHSMGWPRVQGGIPATPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR 180

Query: 181 VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLK 240
           VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLK
Sbjct: 181 VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLK 240

Query: 241 PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR 291
           PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR
Sbjct: 241 PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR 290

[Close]

BLAST of CmoCh16G008310 vs. ExPASy TrEMBL
Match: A0A6J1J9M0 (KH domain-containing protein At1g09660/At1g09670-like OS=Cucurbita maxima OX=3661 GN=LOC111482986 PE=4 SV=1)

HSP 1 Score: 589.0 bits (1517), Expect = 1.2e-164
Identity = 288/290 (99.31%), Postives = 290/290 (100.00%), Query Frame = 0


Query: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL 60
           MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL
Sbjct: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL 60

Query: 61  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHGMGSL 120
           NQEI+RLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHGMGSL
Sbjct: 61  NQEIKRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHGMGSL 120

Query: 121 QAHSMGWPRVQGGIPATPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR 180
           QAHSMGWPRVQGGIPATP+VKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR
Sbjct: 121 QAHSMGWPRVQGGIPATPVVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR 180

Query: 181 VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLK 240
           VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLK
Sbjct: 181 VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLK 240

Query: 241 PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR 291
           PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR
Sbjct: 241 PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR 290

[Close]

BLAST of CmoCh16G008310 vs. ExPASy TrEMBL
Match: A0A5D3BT43 (KH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold18G00980 PE=4 SV=1)

HSP 1 Score: 579.3 bits (1492), Expect = 9.3e-162
Identity = 290/307 (94.46%), Postives = 295/307 (96.09%), Query Frame = 0


Query: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL 60
           MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRER LAELLSERQKLGPFVQVLPHCSRLL
Sbjct: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERCLAELLSERQKLGPFVQVLPHCSRLL 60

Query: 61  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHGMGSL 120
           NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMD+EGWPPMQMEGSGHVHGMG L
Sbjct: 61  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDMEGWPPMQMEGSGHVHGMGPL 120

Query: 121 QAHSMGWPRVQGGIPATPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR 180
           QAHSMGWPRVQ GIP TPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR
Sbjct: 121 QAHSMGWPRVQ-GIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR 180

Query: 181 VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLK 240
           VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTIN+RLDHAVAVLESLLK
Sbjct: 181 VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINARLDHAVAVLESLLK 240

Query: 241 PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGRAMYIPLLMHG 300
           PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGRA+   L +  
Sbjct: 241 PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGRAVRSSLDI-- 300

Query: 301 GKVDRDG 308
           G +DR G
Sbjct: 301 GIIDRAG 304

[Close]

BLAST of CmoCh16G008310 vs. ExPASy TrEMBL
Match: A0A0A0L3B7 (KH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G110600 PE=4 SV=1)

HSP 1 Score: 575.1 bits (1481), Expect = 1.8e-160
Identity = 284/290 (97.93%), Postives = 286/290 (98.62%), Query Frame = 0


Query: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL 60
           MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRER LAELLSERQKLGPFVQVLPHCSRLL
Sbjct: 111 MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERCLAELLSERQKLGPFVQVLPHCSRLL 170

Query: 61  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHGMGSL 120
           NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMD+EGWPPMQMEGSGHVHGMG L
Sbjct: 171 NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDMEGWPPMQMEGSGHVHGMGPL 230

Query: 121 QAHSMGWPRVQGGIPATPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR 180
           QAHSMGWPRVQ GIP TPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR
Sbjct: 231 QAHSMGWPRVQ-GIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR 290

Query: 181 VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLK 240
           VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTIN+RLDHAVAVLESLLK
Sbjct: 291 VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINARLDHAVAVLESLLK 350

Query: 241 PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR 291
           PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR
Sbjct: 351 PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR 399

[Close]

BLAST of CmoCh16G008310 vs. ExPASy TrEMBL
Match: A0A1S3BST0 (KH domain-containing protein At1g09660/At1g09670 OS=Cucumis melo OX=3656 GN=LOC103493316 PE=4 SV=1)

HSP 1 Score: 575.1 bits (1481), Expect = 1.8e-160
Identity = 284/290 (97.93%), Postives = 286/290 (98.62%), Query Frame = 0


Query: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL 60
           MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRER LAELLSERQKLGPFVQVLPHCSRLL
Sbjct: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERCLAELLSERQKLGPFVQVLPHCSRLL 60

Query: 61  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHGMGSL 120
           NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMD+EGWPPMQMEGSGHVHGMG L
Sbjct: 61  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDMEGWPPMQMEGSGHVHGMGPL 120

Query: 121 QAHSMGWPRVQGGIPATPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR 180
           QAHSMGWPRVQ GIP TPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR
Sbjct: 121 QAHSMGWPRVQ-GIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR 180

Query: 181 VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLK 240
           VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTIN+RLDHAVAVLESLLK
Sbjct: 181 VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINARLDHAVAVLESLLK 240

Query: 241 PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR 291
           PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR
Sbjct: 241 PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR 289

[Close]

BLAST of CmoCh16G008310 vs. NCBI nr
Match: XP_022929365.1 (KH domain-containing protein At1g09660/At1g09670-like isoform X1 [Cucurbita moschata] >XP_022929366.1 KH domain-containing protein At1g09660/At1g09670-like isoform X1 [Cucurbita moschata] >XP_022929367.1 KH domain-containing protein At1g09660/At1g09670-like isoform X1 [Cucurbita moschata] >XP_023551891.1 KH domain-containing protein At1g09660/At1g09670-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 590.5 bits (1521), Expect = 8.4e-165
Identity = 290/290 (100.00%), Postives = 290/290 (100.00%), Query Frame = 0


Query: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL 60
           MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL
Sbjct: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL 60

Query: 61  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHGMGSL 120
           NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHGMGSL
Sbjct: 61  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHGMGSL 120

Query: 121 QAHSMGWPRVQGGIPATPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR 180
           QAHSMGWPRVQGGIPATPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR
Sbjct: 121 QAHSMGWPRVQGGIPATPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR 180

Query: 181 VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLK 240
           VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLK
Sbjct: 181 VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLK 240

Query: 241 PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR 291
           PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR
Sbjct: 241 PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR 290

[Close]

BLAST of CmoCh16G008310 vs. NCBI nr
Match: KAG6577363.1 (Ras-related protein RABA2a, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 590.5 bits (1521), Expect = 8.4e-165
Identity = 290/290 (100.00%), Postives = 290/290 (100.00%), Query Frame = 0


Query: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL 60
           MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL
Sbjct: 238 MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL 297

Query: 61  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHGMGSL 120
           NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHGMGSL
Sbjct: 298 NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHGMGSL 357

Query: 121 QAHSMGWPRVQGGIPATPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR 180
           QAHSMGWPRVQGGIPATPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR
Sbjct: 358 QAHSMGWPRVQGGIPATPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR 417

Query: 181 VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLK 240
           VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLK
Sbjct: 418 VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLK 477

Query: 241 PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR 291
           PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR
Sbjct: 478 PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR 527

[Close]

BLAST of CmoCh16G008310 vs. NCBI nr
Match: XP_022984815.1 (KH domain-containing protein At1g09660/At1g09670-like [Cucurbita maxima])

HSP 1 Score: 589.0 bits (1517), Expect = 2.4e-164
Identity = 288/290 (99.31%), Postives = 290/290 (100.00%), Query Frame = 0


Query: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL 60
           MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL
Sbjct: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL 60

Query: 61  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHGMGSL 120
           NQEI+RLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHGMGSL
Sbjct: 61  NQEIKRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHGMGSL 120

Query: 121 QAHSMGWPRVQGGIPATPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR 180
           QAHSMGWPRVQGGIPATP+VKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR
Sbjct: 121 QAHSMGWPRVQGGIPATPVVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR 180

Query: 181 VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLK 240
           VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLK
Sbjct: 181 VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLK 240

Query: 241 PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR 291
           PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR
Sbjct: 241 PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR 290

[Close]

BLAST of CmoCh16G008310 vs. NCBI nr
Match: KAG7015451.1 (KH domain-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 586.3 bits (1510), Expect = 1.6e-163
Identity = 288/290 (99.31%), Postives = 289/290 (99.66%), Query Frame = 0


Query: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL 60
           MGERTPPGSYFHYPPPS+HASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL
Sbjct: 12  MGERTPPGSYFHYPPPSSHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL 71

Query: 61  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHGMGSL 120
           NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGR MDLEGWPPMQMEGSGHVHGMGSL
Sbjct: 72  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRQMDLEGWPPMQMEGSGHVHGMGSL 131

Query: 121 QAHSMGWPRVQGGIPATPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR 180
           QAHSMGWPRVQGGIPATPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR
Sbjct: 132 QAHSMGWPRVQGGIPATPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR 191

Query: 181 VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLK 240
           VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLK
Sbjct: 192 VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLK 251

Query: 241 PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR 291
           PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR
Sbjct: 252 PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR 301

[Close]

BLAST of CmoCh16G008310 vs. NCBI nr
Match: XP_038904738.1 (KH domain-containing protein At1g09660/At1g09670 isoform X1 [Benincasa hispida])

HSP 1 Score: 579.3 bits (1492), Expect = 1.9e-161
Identity = 286/290 (98.62%), Postives = 287/290 (98.97%), Query Frame = 0


Query: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL 60
           MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL
Sbjct: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL 60

Query: 61  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHGMGSL 120
           NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEG+GHVHGMG L
Sbjct: 61  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGTGHVHGMGPL 120

Query: 121 QAHSMGWPRVQGGIPATPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR 180
           QAHSMGWPRVQ GIP TPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR
Sbjct: 121 QAHSMGWPRVQ-GIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR 180

Query: 181 VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLK 240
           VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLK
Sbjct: 181 VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLK 240

Query: 241 PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR 291
           PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR
Sbjct: 241 PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR 289

[Close]

BLAST of CmoCh16G008310 vs. TAIR 10
Match: AT1G09660.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 361.7 bits (927), Expect = 5.9e-100
Identity = 190/295 (64.41%), Postives = 227/295 (76.95%), Query Frame = 0


Query: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL 60
           M ER  PGS+F YP     ASP+R+P  P DRERYL ELL ERQKLGPF+QV+P+C RLL
Sbjct: 11  MEERISPGSFFQYPLSGFRASPNRSPCPPSDRERYLTELLQERQKLGPFLQVMPNCCRLL 70

Query: 61  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHGMGSL 120
           N EIRR+S       D +R+EHGSP+RSLGQ +NG+ +DLEGW  MQ E + H+      
Sbjct: 71  NHEIRRVSSF----PDLDRYEHGSPFRSLGQPTNGK-LDLEGWSMMQAEENCHLQRASPF 130

Query: 121 QAHS-MGWPRVQGGIPATPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTEC 180
           +  S +GW  +  G+P  PIVK+V+RLDVPVDKYP+YNFVGR+LGPRGNSLKRVE  T C
Sbjct: 131 RGPSPVGWIGMP-GLPNPPIVKKVIRLDVPVDKYPSYNFVGRILGPRGNSLKRVELATHC 190

Query: 181 RVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLL 240
           RV+IRG+GS+KD ++EEKLK KPGYEHL EPLH+L+EAE PED INSRL+HAV  LESLL
Sbjct: 191 RVFIRGRGSVKDTVKEEKLKGKPGYEHLCEPLHVLIEAELPEDIINSRLEHAVHFLESLL 250

Query: 241 KPVDELLDQYKKQQLRELALLNGTLREESPS------MSPSMSPFNSTGLKRAKT 289
           KP+DE +D YK++QL+ELA LNGTLREESPS      +SPSMSPFNS   KRAKT
Sbjct: 251 KPMDESMDHYKREQLKELAALNGTLREESPSPSLSPCLSPSMSPFNS---KRAKT 296

[Close]

BLAST of CmoCh16G008310 vs. TAIR 10
Match: AT1G09660.2 (RNA-binding KH domain-containing protein )

HSP 1 Score: 305.1 bits (780), Expect = 6.5e-83
Identity = 155/243 (63.79%), Postives = 187/243 (76.95%), Query Frame = 0


Query: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLL 60
           M ER  PGS+F YP     ASP+R+P  P DRERYL ELL ERQKLGPF+QV+P+C RLL
Sbjct: 11  MEERISPGSFFQYPLSGFRASPNRSPCPPSDRERYLTELLQERQKLGPFLQVMPNCCRLL 70

Query: 61  NQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHGMGSL 120
           N EIRR+S       D +R+EHGSP+RSLGQ +NG+ +DLEGW  MQ E + H+      
Sbjct: 71  NHEIRRVSSF----PDLDRYEHGSPFRSLGQPTNGK-LDLEGWSMMQAEENCHLQRASPF 130

Query: 121 QAHS-MGWPRVQGGIPATPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTEC 180
           +  S +GW  +  G+P  PIVK+V+RLDVPVDKYP+YNFVGR+LGPRGNSLKRVE  T C
Sbjct: 131 RGPSPVGWIGMP-GLPNPPIVKKVIRLDVPVDKYPSYNFVGRILGPRGNSLKRVELATHC 190

Query: 181 RVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLL 240
           RV+IRG+GS+KD ++EEKLK KPGYEHL EPLH+L+EAE PED INSRL+HAV  LESLL
Sbjct: 191 RVFIRGRGSVKDTVKEEKLKGKPGYEHLCEPLHVLIEAELPEDIINSRLEHAVHFLESLL 247

Query: 241 KPV 243
           KP+
Sbjct: 251 KPM 247

[Close]

BLAST of CmoCh16G008310 vs. TAIR 10
Match: AT3G08620.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 286.6 bits (732), Expect = 2.4e-77
Identity = 162/289 (56.06%), Postives = 198/289 (68.51%), Query Frame = 0


Query: 9   SYFHYPPPSAHASPHRTPSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLLNQEIRRLS 68
           +Y ++ P  A +   RTPS  +D  +Y+++LL+E QKLGPF+QVLP CSRLLNQEI R++
Sbjct: 6   NYNNFSPSRAASPQIRTPSSDVD-SQYISQLLAEHQKLGPFMQVLPICSRLLNQEIFRIT 65

Query: 69  GL--NQTSVDHERFEH--GSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHGMGSLQAHS 128
           G+  NQ   D +R  H   SP  S   +SN     L GW  +  E  G  HGM      +
Sbjct: 66  GMMPNQGFTDFDRLRHRSPSPMASPNLMSNVSGGGLGGWNGLPPERIGGPHGM------A 125

Query: 129 MGWPRVQGGIPATPI---VKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRV 188
           M W     G PA+P    VKR++RLD+PVD YPN+NFVGRLLGPRGNSLKRVEA T CRV
Sbjct: 126 MEWQ----GAPASPSSYPVKRILRLDLPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRV 185

Query: 189 YIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKP 248
           YIRGKGSIKD  +EEKLK KPGYEHLNE LH+L+EA+ P D ++ +L  A  ++E L+KP
Sbjct: 186 YIRGKGSIKDPEKEEKLKGKPGYEHLNEQLHILIEADLPIDIVDIKLRQAQEIIEELVKP 245

Query: 249 VDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR 291
           VDE  D  K+QQLRELALLN  LRE SP  S S+SPFNS  +KR KTGR
Sbjct: 246 VDESQDYIKRQQLRELALLNSNLRENSPGPSGSVSPFNSNAMKRPKTGR 283

[Close]

BLAST of CmoCh16G008310 vs. TAIR 10
Match: AT4G26480.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 282.3 bits (721), Expect = 4.5e-76
Identity = 157/292 (53.77%), Postives = 199/292 (68.15%), Query Frame = 0


Query: 8   GSYFHYP-----PPSAHASPH------RTPSIPLDRERYLAELLSERQKLGPFVQVLPHC 67
           G +  YP     PPSA  SP+        PS  +++E+YL+ELL+ER KL PF+ VLPH 
Sbjct: 23  GRFVTYPPPLSVPPSAPQSPNFSGGLRSQPSFLVEQEKYLSELLAERHKLTPFLPVLPHV 82

Query: 68  SRLLNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHG 127
            RL+NQEI R++ L + ++   RF+H SP  S G   N R  D+ GW   Q      V  
Sbjct: 83  CRLMNQEILRVTTLLENALSQSRFDHPSPLASGGIFQNSR-ADMNGW-ASQFPSERSV-- 142

Query: 128 MGSLQAHSMGWPRVQGGIPATPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEAL 187
             S   + +  P    G+    IVKR +R+D+PVDKYPNYNFVGRLLGPRGNSLKRVEA 
Sbjct: 143 SSSPAPNWLNSPGSSSGL----IVKRTIRVDIPVDKYPNYNFVGRLLGPRGNSLKRVEAS 202

Query: 188 TECRVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLE 247
           T+CRV IRG+GSIKD ++E+ ++ KPGYEHLNEPLH+LVEAE P + +++RL  A  +L+
Sbjct: 203 TDCRVLIRGRGSIKDPIKEDMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILD 262

Query: 248 SLLKPVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKT 289
            LL PV+E  D YKKQQLRELALLNG+LREE   MS S+SP+NS G+KRAKT
Sbjct: 263 DLLTPVEETHDFYKKQQLRELALLNGSLREEGSPMSGSISPYNSLGMKRAKT 306

[Close]

BLAST of CmoCh16G008310 vs. TAIR 10
Match: AT5G56140.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 270.8 bits (691), Expect = 1.4e-72
Identity = 151/282 (53.55%), Postives = 190/282 (67.38%), Query Frame = 0


Query: 15  PPSAHASPHRT------PSIPLDRERYLAELLSERQKLGPFVQVLPHCSRLLNQEIRRLS 74
           PPSA  SP+ +       S+ +++E+YL+ELL+ER KL PF+ VLPH  RLLNQEI R++
Sbjct: 39  PPSAPQSPNYSGGLRSQSSVFVEQEKYLSELLAERHKLTPFLPVLPHAFRLLNQEILRVT 98

Query: 75  GL--NQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHGMGSLQAHSMG 134
            L  N T +     +H SP  S G   N R  D+ GW              G    +S  
Sbjct: 99  TLLENATVLSQSGLDHPSPLASGGIFQNAR-ADMNGWASQFPSERSVPSSPGPNWLNS-- 158

Query: 135 WPRVQGGIPATPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRVYIRGK 194
            P    G+    I KR +R+D+PVD YPN+NFVGRLLGPRGNSLKRVEA T+CRV IRG+
Sbjct: 159 -PGSSSGL----IAKRTIRVDIPVDNYPNFNFVGRLLGPRGNSLKRVEASTDCRVLIRGR 218

Query: 195 GSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLKPVDELL 254
           GSIKD ++EE ++ KPGYEHLNEPLH+LVEAE P + +++RL  A  +L+ LL P++E  
Sbjct: 219 GSIKDPIKEEMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDDLLTPMEETH 278

Query: 255 DQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKT 289
           D YKKQQLRELALLNGTLREE   MS S+SP+NS G+KRAKT
Sbjct: 279 DMYKKQQLRELALLNGTLREEGSPMSGSVSPYNSLGMKRAKT 312

The following BLAST results are available for this feature:

BLAST of CmoCh16G008310 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GWR3	8.3e-99	64.41	KH domain-containing protein At1g09660/At1g09670 OS=Arabidopsis thaliana OX=3702...	[more]
Q8GYR4	3.4e-76	56.06	KH domain-containing protein At3g08620 OS=Arabidopsis thaliana OX=3702 GN=At3g08...	[more]
Q0WLR1	6.4e-75	53.77	KH domain-containing protein At4g26480 OS=Arabidopsis thaliana OX=3702 GN=At4g26...	[more]
Q75GR5	2.3e-72	54.96	KH domain-containing protein SPIN1 OS=Oryza sativa subsp. japonica OX=39947 GN=S...	[more]
Q9FKT4	1.9e-71	53.55	KH domain-containing protein At5g56140 OS=Arabidopsis thaliana OX=3702 GN=At5g56...	[more]

BLAST of CmoCh16G008310 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EMX9	4.1e-165	100.00	KH domain-containing protein At1g09660/At1g09670-like isoform X1 OS=Cucurbita mo...	[more]
A0A6J1J9M0	1.2e-164	99.31	KH domain-containing protein At1g09660/At1g09670-like OS=Cucurbita maxima OX=366...	[more]
A0A5D3BT43	9.3e-162	94.46	KH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A0A0L3B7	1.8e-160	97.93	KH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G110600 PE=4 SV=...	[more]
A0A1S3BST0	1.8e-160	97.93	KH domain-containing protein At1g09660/At1g09670 OS=Cucumis melo OX=3656 GN=LOC1...	[more]

BLAST of CmoCh16G008310 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022929365.1	8.4e-165	100.00	KH domain-containing protein At1g09660/At1g09670-like isoform X1 [Cucurbita mosc...	[more]
KAG6577363.1	8.4e-165	100.00	Ras-related protein RABA2a, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022984815.1	2.4e-164	99.31	KH domain-containing protein At1g09660/At1g09670-like [Cucurbita maxima]	[more]
KAG7015451.1	1.6e-163	99.31	KH domain-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperm...	[more]
XP_038904738.1	1.9e-161	98.62	KH domain-containing protein At1g09660/At1g09670 isoform X1 [Benincasa hispida]	[more]

BLAST of CmoCh16G008310 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G09660.1	5.9e-100	64.41	RNA-binding KH domain-containing protein	[more]
AT1G09660.2	6.5e-83	63.79	RNA-binding KH domain-containing protein	[more]
AT3G08620.1	2.4e-77	56.06	RNA-binding KH domain-containing protein	[more]
AT4G26480.1	4.5e-76	53.77	RNA-binding KH domain-containing protein	[more]
AT5G56140.1	1.4e-72	53.55	RNA-binding KH domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004087	K Homology domain	SMART	SM00322	kh_6	coord: 140..240 e-value: 0.0017 score: 27.6
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 29..272 e-value: 2.4E-68 score: 232.2
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 146..265
IPR032377	STAR protein, homodimerisation region	PFAM	PF16544	STAR_dimer	coord: 34..68 e-value: 3.9E-10 score: 39.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
None	No IPR available	PANTHER	PTHR11208:SF101	OS01G0886300 PROTEIN	coord: 8..290
None	No IPR available	CDD	cd02395	SF1_like-KH	coord: 145..265 e-value: 1.35311E-50 score: 161.643
IPR045071	KH domain-containing BBP-like	PANTHER	PTHR11208	RNA-BINDING PROTEIN RELATED	coord: 8..290

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh16G008310.1	CmoCh16G008310.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding