CmoCh16G007750 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATTTGTTCCATCGGCTCATGGACTAAACTCCCGATTTTTCGTTGAAGTAATTGTGAAGTTTCATTGTCGCGTTCCTTCGCTTACAAGTTGATGATTTACCTCACCCATTCAACAAACTTTTAGCTTAATCCGAACGAACACTGGTCCACGGGCGGAACCCACTGAGAATTTGGTAAACTAGAGCTGAAATCTTTTGTAGAGAGAGAGAGAGAAAGGGGTTTTCGAGTTCTTATGCGACGGAATCCATGTTGGAGAGGAGGAGGATGATCGAGTGGGAAGCAGGGAGAATCTGGATGTTAATGGAGAATAAATTGAGCTAAGGATTGGGGAATTTGCTGGAAATCGATTGGTTTCTTCTCTTTTTTTTTACATGAAATGCTATCATGGGTAAGCAACAATCCTTGCGCAGCAAAGCAGTTCATCTTGTCTCCGATATCACCACCGTTCTTCTCAACCCAATTTCTGATAAACCTTCCGCGAGAACCTCTGCTCATCCTCATCATCATCATCATTCGCCTGTGAGTTTGTCTCTCTCAAGCTGGAATAGGATTTCAATTTTTTTTTCTTTTTTTTGCTTTGCTATCCTTCGATTGTTCTTCTGGCAGTTCTACTTCGGGATTTTATACGTTTTTCTTTAGCATGTCTTTTATGGACGGGATGGCTCTGATTTCATTTGGTTTGACTTAATCGGTGGTTGTTATATGCCTTTATTTGTCTTGATCGTTAATATTTGTACATAAATGTAGGGCAGAAGGTTAGATTCATCCTGTTCGAATGGTTGTTGATAGGGAATTTCACTCCGCTTCTGAAAATAAACGTGTTTTTCTTCTTGTAATGGAACATTTATGTATAGAGATGTTTGTTAATGGGAATTACCTGAGGTTTCAAAGTCTCATCGGGAGTAGGCAGTCATGTCCAATCTTTAACTGGATTGGCATTTTTCTTTTAGGAGGATGCGAGCGACCTTAAAGACAACAGTGATCTAGGGTCAGCTAGTGAACAGGGTTCTGAATTTTCAGATGATGGCCCTGATACATCTTCATTCACTGCATTCCTGTATTCCCTCTTGTCGTCCTCAGAATCGCGGGAAAATTTGAACTCCGATGAACACAGTGATAATCAGGCCGTGGCAGCCGGTCAGCCAATGAACAATGCTGCGAAAGAAACTGTTACGAAGAAGAGCTTGTTTTCTAGGGGGAAACAATCACTTGGTAGAGCTTTTCATCATGCTGCAAGAATCACTGGCTACCGAAACCAGGAGCGGAAGAGTGATGTTGAGATGAAAGTTAATGATGCTAAATTTTCTGGAATTGAGATGATGGAGAAGCCAAATGTAATCGAGGTTGCTTCATCAGTTGACGATGTCCCTGATGCGTCTGAGCCTTCACTGCTCCTTTCGGAAAAAAGTAGAACTATTCTTTATGCTTCCCTTCCAGCTCTAGTTCAGGGGAGGAAATGGCTATTGCTATACAGGTGAAGAGCTCCAGCATTTTGTTTTATAGATTATGTTTCTAGAAATGATCATGGGATTTCAATTATTTATACTCTATCATCTGATTCGTAAATATATATCGGTCGTGCAATGCAGTACATGGAGGCATGGGATATCGCTTTCAACTCTATATAGGAGAAGCATGCTTTGGTCTGGGCTCAGTTTGCTGGTAACTATAAATTTAATTTTTCTATGACAAGTTTGCTTTGATATGTATTCATCCTAAACCATGTCTGTTGAATGAATGTAGCAAAAAGTTCTTTTCCTTTGAATAAAAATGTAGAGTTGAACTATCAATTCAAGCATATCTGAGTGAATAAGACACTAATTATTATCTCAAAAGTCGATGATTCGGTCTCTCACTGCTACAATTGCCACCGATGCATATAAATATTACATATATGCAATAGCTTCTGTCAGACAATGTATCACTTACGCATAATTTACTTCTAGGTTGTCGGGGACCGTAAAGGTGCTGTATTTGGCGGTTTGGTGGAAGCACCGCTAAAACCGAGCAGCAAGAAAAAGTATCAGGTGCTTCTTACACGTCTTTACTCTTTACTTAAAGCATAGTGAGGAAGTGTCTGCAATTGACCTTATCTTATCATGAATCTTGAATAGGGAACAAATAATACTTTTGTGTTCACAAGTATACCTGGCCATCCTGTGATTTATCGCCCCACAGGTACTTATAAACCTTGTTTAATATTCATTCACCAGAAGTCTTTTCATACCAATCTTTTGCATATTCTTTGTGAATTGACATTGTTTTACTAGTAACCACAGATTCAGTTCATTGGCAACCTTTGCCACTATCCTTAAATGATTATGCAAGTTTATTATGAACTTAAGAGTTAAATATTGGTTGGGGTACTAGGTAAGTAATCATTCCACTGATCATTGAGCTTAAGAAAATGAAGATACTGTATTTGATCATTTTGTAGCTATAATATTTTGCTTAGCATTCTGTTTCTTTGCCTAATCTTGAGATTAACTACGTTCCTTCTAGGAAATGGGGCAAATTATGCCCTTACACCATTTTCATGGCCGTATTCTTGTGGCTAATGAAAGTACTGCAACTCCTTTATCTTTATCTATTGGAAACTTTGGATACCCTTTTGTCTCTCGTTGTGAGGACTAGCCTGAATTTTCTCTCGAGTTGCGAATTTGAACATTCCACACAATAATGTTGATAAATATCGACCATGACTCAGTTTTTTCATGCACGAGCTTCAAATGGCCTAATTAGGGTTTCGGTTTTAAGCCTATACGTAAAGTGCTATTGGCACTTTTTCTCCGAAATTTGAGTTAAATTAATCGAATTTGAACATTTCCTAATTGGGCCGTTTGAAGCATGCACGTGAGAAAACTGAGTTACGGTCGATATTTTTCAACATTGTTGTAGGGAATGTTCACAAAATTTCAAATTCGATTAATTGGACTCAAATTTCAAAGAAAAAGTGCCCATAGCACTTTACGTACAGGCTTAAAACTGAAATCCTAATTGGACCGTTTGAAGCGGGTAATTGCATGTTCTTGAATCTTGTTAGGGACCTATTCTAAGATTGCTAATAATACTCGATGGGTGCTGCCTTAGAGTTCTCTTTCTTACATGGTTTTAAAACTTCAAATTGATTCAACCAGGTGAAAATTACTATTTCACATTGTGCTCACCGGACTTCTTAGCCATTGGCGGTGGCAGCCATTTTGCACTCTATTTGGACAATGACCTGTGAGAACACTAATTAACTGCCCCTTTTAATAGTCTATGGTCATATCAGTTATCTTAAGTAAACTTTCAACTTAATCATATGCTTATAAATATGTTCTTGAATTTAAGATTGAATGGATCAAGTTCGACATCGGAGACGTACGGAAATCCTTGTCTTGCAAATACTGAAGAATTTGAAGTGAAGGAAGTTGAGGTGATTGTAGAACGTCACAGTTCATAAATTTTATAAATTCTAAGATCTAAGATCTGTTTTTAAGTAACCTACCACTGATTCTAAGATCTGTTTTATAAATTGTGTATTTAATGCAGTTATGGGGCTTTGTATACACCTCACAGTATGAAGAAATGCTTGCTTTGAGCCGAACTGAAGCACCTGGGATTTGTCGTTGGTGAACGATTTTCAAATACAACCAGAACCGCAGCTTTACCGAATGAATCGACATCCTGTGGATCTCATAACCATCTAGACATGATTATATGATGATGAAGGCCGATGAACTAGTTAAAGAAATGAGAAGGTTGAATGGGTATTTCTGAATCTGAATCCTTCTCCACACTTGTACATAAAAACTTCACACATGTGCATATAGAAGTGTGCAGTTTTGCTTTCCTTTACTTGTACCTAACTTTGTTTGAAGGGCATTGTTTTGTTGGGATATCATATTCTGAGTATTTATTCAATGAATGATTTGCCCTTTTGCTTCTTCTTTTCA AATTTGTTCCATCGGCTCATGGACTAAACTCCCGATTTTTCGTTGAAGTAATTGTGAAGTTTCATTGTCGCGTTCCTTCGCTTACAAGTTGATGATTTACCTCACCCATTCAACAAACTTTTAGCTTAATCCGAACGAACACTGGTCCACGGGCGGAACCCACTGAGAATTTGGTAAACTAGAGCTGAAATCTTTTGTAGAGAGAGAGAGAGAAAGGGGTTTTCGAGTTCTTATGCGACGGAATCCATGTTGGAGAGGAGGAGGATGATCGAGTGGGAAGCAGGGAGAATCTGGATGTTAATGGAGAATAAATTGAGCTAAGGATTGGGGAATTTGCTGGAAATCGATTGGTTTCTTCTCTTTTTTTTTACATGAAATGCTATCATGGGTAAGCAACAATCCTTGCGCAGCAAAGCAGTTCATCTTGTCTCCGATATCACCACCGTTCTTCTCAACCCAATTTCTGATAAACCTTCCGCGAGAACCTCTGCTCATCCTCATCATCATCATCATTCGCCTGAGGATGCGAGCGACCTTAAAGACAACAGTGATCTAGGGTCAGCTAGTGAACAGGGTTCTGAATTTTCAGATGATGGCCCTGATACATCTTCATTCACTGCATTCCTGTATTCCCTCTTGTCGTCCTCAGAATCGCGGGAAAATTTGAACTCCGATGAACACAGTGATAATCAGGCCGTGGCAGCCGGTCAGCCAATGAACAATGCTGCGAAAGAAACTGTTACGAAGAAGAGCTTGTTTTCTAGGGGGAAACAATCACTTGGTAGAGCTTTTCATCATGCTGCAAGAATCACTGGCTACCGAAACCAGGAGCGGAAGAGTGATGTTGAGATGAAAGTTAATGATGCTAAATTTTCTGGAATTGAGATGATGGAGAAGCCAAATGTAATCGAGGTTGCTTCATCAGTTGACGATGTCCCTGATGCGTCTGAGCCTTCACTGCTCCTTTCGGAAAAAAGTAGAACTATTCTTTATGCTTCCCTTCCAGCTCTAGTTCAGGGGAGGAAATGGCTATTGCTATACAGTACATGGAGGCATGGGATATCGCTTTCAACTCTATATAGGAGAAGCATGCTTTGGTCTGGGCTCAGTTTGCTGGTTGTCGGGGACCGTAAAGGTGCTGTATTTGGCGGTTTGGTGGAAGCACCGCTAAAACCGAGCAGCAAGAAAAAGTATCAGGGAACAAATAATACTTTTGTGTTCACAAGTATACCTGGCCATCCTGTGATTTATCGCCCCACAGGTGAAAATTACTATTTCACATTGTGCTCACCGGACTTCTTAGCCATTGGCGGTGGCAGCCATTTTGCACTCTATTTGGACAATGACCTATTGAATGGATCAAGTTCGACATCGGAGACGTACGGAAATCCTTGTCTTGCAAATACTGAAGAATTTGAAGTGAAGGAAGTTGAGTTATGGGGCTTTGTATACACCTCACAGTATGAAGAAATGCTTGCTTTGAGCCGAACTGAAGCACCTGGGATTTGTCGTTGGTGAACGATTTTCAAATACAACCAGAACCGCAGCTTTACCGAATGAATCGACATCCTGTGGATCTCATAACCATCTAGACATGATTATATGATGATGAAGGCCGATGAACTAGTTAAAGAAATGAGAAGGTTGAATGGGTATTTCTGAATCTGAATCCTTCTCCACACTTGTACATAAAAACTTCACACATGTGCATATAGAAGTGTGCAGTTTTGCTTTCCTTTACTTGTACCTAACTTTGTTTGAAGGGCATTGTTTTGTTGGGATATCATATTCTGAGTATTTATTCAATGAATGATTTGCCCTTTTGCTTCTTCTTTTCA ATGGGTAAGCAACAATCCTTGCGCAGCAAAGCAGTTCATCTTGTCTCCGATATCACCACCGTTCTTCTCAACCCAATTTCTGATAAACCTTCCGCGAGAACCTCTGCTCATCCTCATCATCATCATCATTCGCCTGAGGATGCGAGCGACCTTAAAGACAACAGTGATCTAGGGTCAGCTAGTGAACAGGGTTCTGAATTTTCAGATGATGGCCCTGATACATCTTCATTCACTGCATTCCTGTATTCCCTCTTGTCGTCCTCAGAATCGCGGGAAAATTTGAACTCCGATGAACACAGTGATAATCAGGCCGTGGCAGCCGGTCAGCCAATGAACAATGCTGCGAAAGAAACTGTTACGAAGAAGAGCTTGTTTTCTAGGGGGAAACAATCACTTGGTAGAGCTTTTCATCATGCTGCAAGAATCACTGGCTACCGAAACCAGGAGCGGAAGAGTGATGTTGAGATGAAAGTTAATGATGCTAAATTTTCTGGAATTGAGATGATGGAGAAGCCAAATGTAATCGAGGTTGCTTCATCAGTTGACGATGTCCCTGATGCGTCTGAGCCTTCACTGCTCCTTTCGGAAAAAAGTAGAACTATTCTTTATGCTTCCCTTCCAGCTCTAGTTCAGGGGAGGAAATGGCTATTGCTATACAGTACATGGAGGCATGGGATATCGCTTTCAACTCTATATAGGAGAAGCATGCTTTGGTCTGGGCTCAGTTTGCTGGTTGTCGGGGACCGTAAAGGTGCTGTATTTGGCGGTTTGGTGGAAGCACCGCTAAAACCGAGCAGCAAGAAAAAGTATCAGGGAACAAATAATACTTTTGTGTTCACAAGTATACCTGGCCATCCTGTGATTTATCGCCCCACAGGTGAAAATTACTATTTCACATTGTGCTCACCGGACTTCTTAGCCATTGGCGGTGGCAGCCATTTTGCACTCTATTTGGACAATGACCTATTGAATGGATCAAGTTCGACATCGGAGACGTACGGAAATCCTTGTCTTGCAAATACTGAAGAATTTGAAGTGAAGGAAGTTGAGTTATGGGGCTTTGTATACACCTCACAGTATGAAGAAATGCTTGCTTTGAGCCGAACTGAAGCACCTGGGATTTGTCGTTGGTGA MGKQQSLRSKAVHLVSDITTVLLNPISDKPSARTSAHPHHHHHSPEDASDLKDNSDLGSASEQGSEFSDDGPDTSSFTAFLYSLLSSSESRENLNSDEHSDNQAVAAGQPMNNAAKETVTKKSLFSRGKQSLGRAFHHAARITGYRNQERKSDVEMKVNDAKFSGIEMMEKPNVIEVASSVDDVPDASEPSLLLSEKSRTILYASLPALVQGRKWLLLYSTWRHGISLSTLYRRSMLWSGLSLLVVGDRKGAVFGGLVEAPLKPSSKKKYQGTNNTFVFTSIPGHPVIYRPTGENYYFTLCSPDFLAIGGGSHFALYLDNDLLNGSSSTSETYGNPCLANTEEFEVKEVELWGFVYTSQYEEMLALSRTEAPGICRW Homology
BLAST of CmoCh16G007750 vs. ExPASy Swiss-Prot
Match: A8KBE0 (Oxidation resistance protein 1 OS=Xenopus tropicalis OX=8364 GN=oxr1 PE=2 SV=2) HSP 1 Score: 118.6 bits (296), Expect = 1.5e-25 Identity = 71/171 (41.52%), Postives = 95/171 (55.56%), Query Frame = 0
BLAST of CmoCh16G007750 vs. ExPASy Swiss-Prot
Match: Q8N573 (Oxidation resistance protein 1 OS=Homo sapiens OX=9606 GN=OXR1 PE=1 SV=2) HSP 1 Score: 117.9 bits (294), Expect = 2.6e-25 Identity = 71/171 (41.52%), Postives = 94/171 (54.97%), Query Frame = 0
BLAST of CmoCh16G007750 vs. ExPASy Swiss-Prot
Match: B4F6Q9 (Oxidation resistance protein 1 OS=Xenopus laevis OX=8355 GN=oxr1 PE=2 SV=2) HSP 1 Score: 117.9 bits (294), Expect = 2.6e-25 Identity = 70/171 (40.94%), Postives = 95/171 (55.56%), Query Frame = 0
BLAST of CmoCh16G007750 vs. ExPASy Swiss-Prot
Match: Q4KMM3 (Oxidation resistance protein 1 OS=Mus musculus OX=10090 GN=Oxr1 PE=1 SV=3) HSP 1 Score: 116.3 bits (290), Expect = 7.4e-25 Identity = 70/171 (40.94%), Postives = 93/171 (54.39%), Query Frame = 0
BLAST of CmoCh16G007750 vs. ExPASy Swiss-Prot
Match: Q4V8B0 (Oxidation resistance protein 1 OS=Rattus norvegicus OX=10116 GN=Oxr1 PE=1 SV=3) HSP 1 Score: 116.3 bits (290), Expect = 7.4e-25 Identity = 70/171 (40.94%), Postives = 93/171 (54.39%), Query Frame = 0
BLAST of CmoCh16G007750 vs. ExPASy TrEMBL
Match: A0A6J1EU65 (oxidation resistance protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111435954 PE=4 SV=1) HSP 1 Score: 741.1 bits (1912), Expect = 2.3e-210 Identity = 377/377 (100.00%), Postives = 377/377 (100.00%), Query Frame = 0
BLAST of CmoCh16G007750 vs. ExPASy TrEMBL
Match: A0A6J1J2A6 (TLD domain-containing protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111482770 PE=4 SV=1) HSP 1 Score: 718.4 bits (1853), Expect = 1.6e-203 Identity = 368/377 (97.61%), Postives = 371/377 (98.41%), Query Frame = 0
BLAST of CmoCh16G007750 vs. ExPASy TrEMBL
Match: A0A5A7TA06 (Oxidation resistance protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2764G00040 PE=4 SV=1) HSP 1 Score: 663.7 bits (1711), Expect = 4.6e-187 Identity = 343/377 (90.98%), Postives = 359/377 (95.23%), Query Frame = 0
BLAST of CmoCh16G007750 vs. ExPASy TrEMBL
Match: A0A5D3CSN3 (Oxidation resistance protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold461G00050 PE=4 SV=1) HSP 1 Score: 658.3 bits (1697), Expect = 1.9e-185 Identity = 341/377 (90.45%), Postives = 357/377 (94.69%), Query Frame = 0
BLAST of CmoCh16G007750 vs. ExPASy TrEMBL
Match: A0A1S3C2K0 (oxidation resistance protein 1 OS=Cucumis melo OX=3656 GN=LOC103495741 PE=4 SV=1) HSP 1 Score: 658.3 bits (1697), Expect = 1.9e-185 Identity = 341/377 (90.45%), Postives = 357/377 (94.69%), Query Frame = 0
BLAST of CmoCh16G007750 vs. NCBI nr
Match: XP_022929355.1 (oxidation resistance protein 1 [Cucurbita moschata]) HSP 1 Score: 741.1 bits (1912), Expect = 4.7e-210 Identity = 377/377 (100.00%), Postives = 377/377 (100.00%), Query Frame = 0
BLAST of CmoCh16G007750 vs. NCBI nr
Match: KAG6577309.1 (Oxidation resistance protein 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 736.5 bits (1900), Expect = 1.2e-208 Identity = 375/377 (99.47%), Postives = 375/377 (99.47%), Query Frame = 0
BLAST of CmoCh16G007750 vs. NCBI nr
Match: XP_023552771.1 (oxidation resistance protein 1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 735.7 bits (1898), Expect = 2.0e-208 Identity = 375/377 (99.47%), Postives = 375/377 (99.47%), Query Frame = 0
BLAST of CmoCh16G007750 vs. NCBI nr
Match: XP_022984482.1 (TLD domain-containing protein 2 [Cucurbita maxima] >XP_022984483.1 TLD domain-containing protein 2 [Cucurbita maxima]) HSP 1 Score: 718.4 bits (1853), Expect = 3.3e-203 Identity = 368/377 (97.61%), Postives = 371/377 (98.41%), Query Frame = 0
BLAST of CmoCh16G007750 vs. NCBI nr
Match: XP_004137188.1 (oxidation resistance protein 1 [Cucumis sativus] >KGN53665.2 hypothetical protein Csa_015324 [Cucumis sativus]) HSP 1 Score: 665.2 bits (1715), Expect = 3.3e-187 Identity = 345/377 (91.51%), Postives = 359/377 (95.23%), Query Frame = 0
BLAST of CmoCh16G007750 vs. TAIR 10
Match: AT4G39870.1 (TLD-domain containing nucleolar protein ) HSP 1 Score: 372.9 bits (956), Expect = 3.1e-103 Identity = 221/401 (55.11%), Postives = 279/401 (69.58%), Query Frame = 0
BLAST of CmoCh16G007750 vs. TAIR 10
Match: AT4G39870.2 (TLD-domain containing nucleolar protein ) HSP 1 Score: 372.9 bits (956), Expect = 3.1e-103 Identity = 221/401 (55.11%), Postives = 279/401 (69.58%), Query Frame = 0
BLAST of CmoCh16G007750 vs. TAIR 10
Match: AT2G05590.2 (TLD-domain containing nucleolar protein ) HSP 1 Score: 204.1 bits (518), Expect = 1.9e-52 Identity = 100/180 (55.56%), Postives = 131/180 (72.78%), Query Frame = 0
BLAST of CmoCh16G007750 vs. TAIR 10
Match: AT2G05590.1 (TLD-domain containing nucleolar protein ) HSP 1 Score: 154.8 bits (390), Expect = 1.3e-37 Identity = 77/142 (54.23%), Postives = 102/142 (71.83%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|