CmoCh16G007410 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGATACTAAGGAAGCGTCCACGGCCGCAGATGAAAAGAACGGCGAGTATATCAGGAATCACGGTGGATCTCAGCCACGTGGAGGGCGAACAGCCATCCAATCATCACAATTCCGGCACCGGAGATATTCCTCCGGTGATCGCCACCCAAAATCCGGAGACTGATCAAATGAATTACACCTTATCTTTTGTGTCACCAAGAGGCCGGAGAAATCTCTCCGCCTTTAACAAACACTCCGATGACCCTTCTTCTCTCCACTTTCTTCGCACTTGCACCTTCTGTCACCGCCGTCTCTCCCCCGCCCGTGACATTTACATGTACATGTATGAATCTCTAATTTTATCCTCTCTTTTTTTCTTTTTCTTTTTTTTTTTTATAAATTTCAATACTTTCCCCAAAAAAAATTGATGGGTTTTGTTAATAATAACTCATTAATTCAAGCTTTATTTTTATTTTATTTTTTTGGTTTAAATTATTGTTTAAAATTGAGTTTTGTGTGTAGGGGAGATACAGCTTTTTGCAGTGCTGAGTGTAGAGAGAAGAAGATGGAACAAGATTTCACAAAAGAAAAGGGCACCACCACCGGCCACGGCGGCGGCGGCGGTGGCAGGCATAAAGAAAGGTCAGATTGTGGCAGCGGATTTTAGATGGGTTTTCAAGTATTATATATGTTTGTATGATTATGAATCAGAAATCGATATGCACG ATGATACTAAGGAAGCGTCCACGGCCGCAGATGAAAAGAACGGCGAGTATATCAGGAATCACGGTGGATCTCAGCCACGTGGAGGGCGAACAGCCATCCAATCATCACAATTCCGGCACCGGAGATATTCCTCCGGTGATCGCCACCCAAAATCCGGAGACTGATCAAATGAATTACACCTTATCTTTTGTGTCACCAAGAGGCCGGAGAAATCTCTCCGCCTTTAACAAACACTCCGATGACCCTTCTTCTCTCCACTTTCTTCGCACTTGCACCTTCTGTCACCGCCGTCTCTCCCCCGCCCGTGACATTTACATGTACATGGGAGATACAGCTTTTTGCAGTGCTGAGTGTAGAGAGAAGAAGATGGAACAAGATTTCACAAAAGAAAAGGGCACCACCACCGGCCACGGCGGCGGCGGCGGTGGCAGGCATAAAGAAAGGTCAGATTGTGGCAGCGGATTTTAGATGGGTTTTCAAGTATTATATATGTTTGTATGATTATGAATCAGAAATCGATATGCACG ATGATACTAAGGAAGCGTCCACGGCCGCAGATGAAAAGAACGGCGAGTATATCAGGAATCACGGTGGATCTCAGCCACGTGGAGGGCGAACAGCCATCCAATCATCACAATTCCGGCACCGGAGATATTCCTCCGGTGATCGCCACCCAAAATCCGGAGACTGATCAAATGAATTACACCTTATCTTTTGTGTCACCAAGAGGCCGGAGAAATCTCTCCGCCTTTAACAAACACTCCGATGACCCTTCTTCTCTCCACTTTCTTCGCACTTGCACCTTCTGTCACCGCCGTCTCTCCCCCGCCCGTGACATTTACATGTACATGGGAGATACAGCTTTTTGCAGTGCTGAGTGTAGAGAGAAGAAGATGGAACAAGATTTCACAAAAGAAAAGGGCACCACCACCGGCCACGGCGGCGGCGGCGGTGGCAGGCATAAAGAAAGGTCAGATTGTGGCAGCGGATTTTAG MILRKRPRPQMKRTASISGITVDLSHVEGEQPSNHHNSGTGDIPPVIATQNPETDQMNYTLSFVSPRGRRNLSAFNKHSDDPSSLHFLRTCTFCHRRLSPARDIYMYMGDTAFCSAECREKKMEQDFTKEKGTTTGHGGGGGGRHKERSDCGSGF Homology
BLAST of CmoCh16G007410 vs. ExPASy Swiss-Prot
Match: Q9SGZ8 (FCS-Like Zinc finger 6 OS=Arabidopsis thaliana OX=3702 GN=FLZ6 PE=1 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 2.5e-19 Identity = 60/141 (42.55%), Postives = 75/141 (53.19%), Query Frame = 0
BLAST of CmoCh16G007410 vs. ExPASy Swiss-Prot
Match: F4JW68 (FCS-Like Zinc finger 7 OS=Arabidopsis thaliana OX=3702 GN=FLZ7 PE=1 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 1.8e-17 Identity = 58/132 (43.94%), Postives = 76/132 (57.58%), Query Frame = 0
BLAST of CmoCh16G007410 vs. ExPASy Swiss-Prot
Match: Q8VY80 (FCS-Like Zinc finger 5 OS=Arabidopsis thaliana OX=3702 GN=FLZ5 PE=1 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 3.1e-17 Identity = 61/152 (40.13%), Postives = 80/152 (52.63%), Query Frame = 0
BLAST of CmoCh16G007410 vs. ExPASy Swiss-Prot
Match: Q9LV75 (Protein INCREASED RESISTANCE TO MYZUS PERSICAE 1 OS=Arabidopsis thaliana OX=3702 GN=IRM1 PE=1 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 4.7e-10 Identity = 45/132 (34.09%), Postives = 64/132 (48.48%), Query Frame = 0
BLAST of CmoCh16G007410 vs. ExPASy Swiss-Prot
Match: Q9FGQ9 (FCS-Like Zinc finger 1 OS=Arabidopsis thaliana OX=3702 GN=FLZ1 PE=1 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 2.3e-09 Identity = 33/75 (44.00%), Postives = 42/75 (56.00%), Query Frame = 0
BLAST of CmoCh16G007410 vs. ExPASy TrEMBL
Match: A0A6J1EN49 (uncharacterized protein LOC111436011 OS=Cucurbita moschata OX=3662 GN=LOC111436011 PE=3 SV=1) HSP 1 Score: 321.6 bits (823), Expect = 1.8e-84 Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0
BLAST of CmoCh16G007410 vs. ExPASy TrEMBL
Match: A0A6J1J657 (uncharacterized protein LOC111482935 OS=Cucurbita maxima OX=3661 GN=LOC111482935 PE=3 SV=1) HSP 1 Score: 300.4 bits (768), Expect = 4.2e-78 Identity = 148/155 (95.48%), Postives = 150/155 (96.77%), Query Frame = 0
BLAST of CmoCh16G007410 vs. ExPASy TrEMBL
Match: A0A0A0KUK1 (FLZ-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G030990 PE=3 SV=1) HSP 1 Score: 208.4 bits (529), Expect = 2.2e-50 Identity = 107/141 (75.89%), Postives = 118/141 (83.69%), Query Frame = 0
BLAST of CmoCh16G007410 vs. ExPASy TrEMBL
Match: A0A6J1C5J8 (uncharacterized protein LOC111008457 OS=Momordica charantia OX=3673 GN=LOC111008457 PE=3 SV=1) HSP 1 Score: 196.8 bits (499), Expect = 6.6e-47 Identity = 105/146 (71.92%), Postives = 117/146 (80.14%), Query Frame = 0
BLAST of CmoCh16G007410 vs. ExPASy TrEMBL
Match: A0A1S3BYA3 (uncharacterized protein LOC103494409 OS=Cucumis melo OX=3656 GN=LOC103494409 PE=3 SV=1) HSP 1 Score: 195.7 bits (496), Expect = 1.5e-46 Identity = 101/139 (72.66%), Postives = 116/139 (83.45%), Query Frame = 0
BLAST of CmoCh16G007410 vs. NCBI nr
Match: XP_022929436.1 (uncharacterized protein LOC111436011 [Cucurbita moschata]) HSP 1 Score: 321.6 bits (823), Expect = 3.7e-84 Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0
BLAST of CmoCh16G007410 vs. NCBI nr
Match: XP_023552992.1 (uncharacterized protein LOC111810518 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 308.5 bits (789), Expect = 3.2e-80 Identity = 150/155 (96.77%), Postives = 151/155 (97.42%), Query Frame = 0
BLAST of CmoCh16G007410 vs. NCBI nr
Match: KAG6577279.1 (FCS-Like Zinc finger 6, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 307.4 bits (786), Expect = 7.1e-80 Identity = 150/157 (95.54%), Postives = 152/157 (96.82%), Query Frame = 0
BLAST of CmoCh16G007410 vs. NCBI nr
Match: KAG7015362.1 (hypothetical protein SDJN02_22997, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 304.3 bits (778), Expect = 6.0e-79 Identity = 149/157 (94.90%), Postives = 151/157 (96.18%), Query Frame = 0
BLAST of CmoCh16G007410 vs. NCBI nr
Match: XP_022984751.1 (uncharacterized protein LOC111482935 [Cucurbita maxima]) HSP 1 Score: 300.4 bits (768), Expect = 8.7e-78 Identity = 148/155 (95.48%), Postives = 150/155 (96.77%), Query Frame = 0
BLAST of CmoCh16G007410 vs. TAIR 10
Match: AT1G78020.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 96.7 bits (239), Expect = 1.8e-20 Identity = 60/141 (42.55%), Postives = 75/141 (53.19%), Query Frame = 0
BLAST of CmoCh16G007410 vs. TAIR 10
Match: AT4G39795.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 90.5 bits (223), Expect = 1.3e-18 Identity = 58/132 (43.94%), Postives = 76/132 (57.58%), Query Frame = 0
BLAST of CmoCh16G007410 vs. TAIR 10
Match: AT1G22160.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 89.7 bits (221), Expect = 2.2e-18 Identity = 61/152 (40.13%), Postives = 80/152 (52.63%), Query Frame = 0
BLAST of CmoCh16G007410 vs. TAIR 10
Match: AT5G65040.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 65.9 bits (159), Expect = 3.4e-11 Identity = 45/132 (34.09%), Postives = 64/132 (48.48%), Query Frame = 0
BLAST of CmoCh16G007410 vs. TAIR 10
Match: AT5G47060.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 63.5 bits (153), Expect = 1.7e-10 Identity = 33/75 (44.00%), Postives = 42/75 (56.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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