CmoCh16G007270 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh16G007270
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Mitochondrial transcription termination factor family protein
Location	Cmo_Chr16: 3625187 .. 3626362 (+)
RNA-Seq Expression	CmoCh16G007270
Synteny	CmoCh16G007270

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTACGCGCTGAGATCATCGTTCTCTATTTCCTCTCGCCATAATCCTTCCTCCTTGCTCCGAATTGATCCGCTCTTGTACTGTTTCTTCTCTTCTTCTTCCCACAGCCAAGCCTCTGCTTCATATGGAATCGTCGTTCAATACCTTATTGATACCTTCGAACTCTCCCCCGCCAGAGCGGTGTCGATCATGAGGAGCCGCAGAGGCATTGAATCAACGGAAAAGCCTCAATCCGTTTACAAATATCTTTCAGAGCTCGGATTCTCCAAAGCTCACATTCAATCGACGATACGCCTTGCGCCGCAGATCGCGTTTTCCAACATCGAAAAGACTCTGAAGCCGAAGATCGAGTTCTTCCAGAATTTTGGCTTGGTCGGCTCCGATTTGGGTAGGTTCATTTCCAAGCATTCTACGCTTTTGACTGTTAGTTTGGAGAAGAAATTGATGCCTAGTGTTGAGATTCTTAAGAGTGTTTTCCCCAAGGATGAGTGTAATAGCGATCTCCTGCAAGGTATGCAGCGATGTTGTGACAAGCTTATGCGATCTCCGTATACAAGGTTGCTTGTCAATATTAATTACTTACAAAGTTGCGGGATTGTTGGTTCTCAACTCTCTATGTTACTGAAGAGGCAACCTGCACTTTTTGGTAAGCGTGAATCTCAAGTTAGAGAAATTGTTTCCATGGTTGTAGAGACTGGTTTTTCTACAAATACTAAAATGTTTGTTCATGGACTTCATGCTATCAGTAGTGTAACTAATGCGACCTTCAAGAAGAAAGTGGAATTGATTTGCAGCTTTGGAATAACTGAGAAGGAATGTATGAGAATGTTTACTTCTGCTCCTGTTTTGATAAGAACCTCCGTTGGTAAACTTAAACGTGGTCTAGAATTCTTTATGAATGAGGCAGAAGTCAGTAGATCAGATATTGTTCGTAAACCTACTTGTTTGATGCACGCCATGCAGGGGAGGGTGCTCCCTCGGTATAGAGTTCTTCAGGTCGTAAAGTCGAAGAGTCTATTGAAGAAACACCCGCAATTGCTTGATATATTGGGGATGTCTGATGAGGATTTCTTGGATAAATTCGTGCACAGGTTTCCTGATCATGTGATAGAATTGTTGGCGGCCTTTAGAGGTCAATGTATGGATGAATTGCAGCCTAAGCAGTTGGAAACATGA

mRNA sequence

ATGTACGCGCTGAGATCATCGTTCTCTATTTCCTCTCGCCATAATCCTTCCTCCTTGCTCCGAATTGATCCGCTCTTGTACTGTTTCTTCTCTTCTTCTTCCCACAGCCAAGCCTCTGCTTCATATGGAATCGTCGTTCAATACCTTATTGATACCTTCGAACTCTCCCCCGCCAGAGCGGTGTCGATCATGAGGAGCCGCAGAGGCATTGAATCAACGGAAAAGCCTCAATCCGTTTACAAATATCTTTCAGAGCTCGGATTCTCCAAAGCTCACATTCAATCGACGATACGCCTTGCGCCGCAGATCGCGTTTTCCAACATCGAAAAGACTCTGAAGCCGAAGATCGAGTTCTTCCAGAATTTTGGCTTGGTCGGCTCCGATTTGGGTAGGTTCATTTCCAAGCATTCTACGCTTTTGACTGTTAGTTTGGAGAAGAAATTGATGCCTAGTGTTGAGATTCTTAAGAGTGTTTTCCCCAAGGATGAGTGTAATAGCGATCTCCTGCAAGGTATGCAGCGATGTTGTGACAAGCTTATGCGATCTCCGTATACAAGGTTGCTTGTCAATATTAATTACTTACAAAGTTGCGGGATTGTTGGTTCTCAACTCTCTATGTTACTGAAGAGGCAACCTGCACTTTTTGGTAAGCGTGAATCTCAAGTTAGAGAAATTGTTTCCATGGTTGTAGAGACTGGTTTTTCTACAAATACTAAAATGTTTGTTCATGGACTTCATGCTATCAGTAGTGTAACTAATGCGACCTTCAAGAAGAAAGTGGAATTGATTTGCAGCTTTGGAATAACTGAGAAGGAATGTATGAGAATGTTTACTTCTGCTCCTGTTTTGATAAGAACCTCCGTTGGTAAACTTAAACGTGGTCTAGAATTCTTTATGAATGAGGCAGAAGTCAGTAGATCAGATATTGTTCGTAAACCTACTTGTTTGATGCACGCCATGCAGGGGAGGGTGCTCCCTCGGTATAGAGTTCTTCAGGTCGTAAAGTCGAAGAGTCTATTGAAGAAACACCCGCAATTGCTTGATATATTGGGGATGTCTGATGAGGATTTCTTGGATAAATTCGTGCACAGGTTTCCTGATCATGTGATAGAATTGTTGGCGGCCTTTAGAGGTCAATGTATGGATGAATTGCAGCCTAAGCAGTTGGAAACATGA

Coding sequence (CDS)

ATGTACGCGCTGAGATCATCGTTCTCTATTTCCTCTCGCCATAATCCTTCCTCCTTGCTCCGAATTGATCCGCTCTTGTACTGTTTCTTCTCTTCTTCTTCCCACAGCCAAGCCTCTGCTTCATATGGAATCGTCGTTCAATACCTTATTGATACCTTCGAACTCTCCCCCGCCAGAGCGGTGTCGATCATGAGGAGCCGCAGAGGCATTGAATCAACGGAAAAGCCTCAATCCGTTTACAAATATCTTTCAGAGCTCGGATTCTCCAAAGCTCACATTCAATCGACGATACGCCTTGCGCCGCAGATCGCGTTTTCCAACATCGAAAAGACTCTGAAGCCGAAGATCGAGTTCTTCCAGAATTTTGGCTTGGTCGGCTCCGATTTGGGTAGGTTCATTTCCAAGCATTCTACGCTTTTGACTGTTAGTTTGGAGAAGAAATTGATGCCTAGTGTTGAGATTCTTAAGAGTGTTTTCCCCAAGGATGAGTGTAATAGCGATCTCCTGCAAGGTATGCAGCGATGTTGTGACAAGCTTATGCGATCTCCGTATACAAGGTTGCTTGTCAATATTAATTACTTACAAAGTTGCGGGATTGTTGGTTCTCAACTCTCTATGTTACTGAAGAGGCAACCTGCACTTTTTGGTAAGCGTGAATCTCAAGTTAGAGAAATTGTTTCCATGGTTGTAGAGACTGGTTTTTCTACAAATACTAAAATGTTTGTTCATGGACTTCATGCTATCAGTAGTGTAACTAATGCGACCTTCAAGAAGAAAGTGGAATTGATTTGCAGCTTTGGAATAACTGAGAAGGAATGTATGAGAATGTTTACTTCTGCTCCTGTTTTGATAAGAACCTCCGTTGGTAAACTTAAACGTGGTCTAGAATTCTTTATGAATGAGGCAGAAGTCAGTAGATCAGATATTGTTCGTAAACCTACTTGTTTGATGCACGCCATGCAGGGGAGGGTGCTCCCTCGGTATAGAGTTCTTCAGGTCGTAAAGTCGAAGAGTCTATTGAAGAAACACCCGCAATTGCTTGATATATTGGGGATGTCTGATGAGGATTTCTTGGATAAATTCGTGCACAGGTTTCCTGATCATGTGATAGAATTGTTGGCGGCCTTTAGAGGTCAATGTATGGATGAATTGCAGCCTAAGCAGTTGGAAACATGA

Protein sequence

MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARAVSIMRSRRGIESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIEKTLKPKIEFFQNFGLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILKSVFPKDECNSDLLQGMQRCCDKLMRSPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGKRESQVREIVSMVVETGFSTNTKMFVHGLHAISSVTNATFKKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMNEAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSKSLLKKHPQLLDILGMSDEDFLDKFVHRFPDHVIELLAAFRGQCMDELQPKQLET

Homology

[Close]

BLAST of CmoCh16G007270 vs. ExPASy Swiss-Prot
Match: F4JVI3 (Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF5 PE=1 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 9.5e-07
Identity = 44/161 (27.33%), Postives = 77/161 (47.83%), Query Frame = 0


Query: 75  KPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIEKTLKPKIEFFQNFGLVGSDLGRFIS 134
           K + V ++L +LG  K+ I + +   PQI   ++   LKP + F +  G+  +   + IS
Sbjct: 231 KIKPVVEFLLDLGIPKSDIPTILCKRPQICGISLTDNLKPTMAFLETLGIDKNQWAKIIS 290

Query: 135 KHSTLLTVSLEKKLMPSVEILKSVFPKDECNSDLLQGMQRCCDKLMRSPYTRLLVNINYL 194
           +   +LT S  +KL  +VE L      +E    +L    RC + +  S   +L   + Y 
Sbjct: 291 RFPAILTYS-RQKLTSTVEFLSQTGLTEEQIGRIL---TRCPNIMSYSVEDKLRPTMEYF 350

Query: 195 QSCGIVGSQLSMLLKRQPALFG-KRESQVREIVSMVVETGF 235
           +S  +    +++LL R P  FG   ES ++ +    +E GF
Sbjct: 351 RSLNV---DVAVLLHRCPQTFGLSIESNLKPVTEFFLEKGF 384

[Close]

BLAST of CmoCh16G007270 vs. ExPASy Swiss-Prot
Match: F4IHL3 (Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF2 PE=3 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 1.4e-05
Identity = 54/213 (25.35%), Postives = 86/213 (40.38%), Query Frame = 0


Query: 69  GIESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIEKTLKPKIEFFQNFGLVGSD 128
           G    E+ + + KY   LG  K  ++  + + P +   ++EKT+ PK+ F Q  G+    
Sbjct: 381 GCSIEERWKPLVKYFYYLGIPKEGMKRILVVKPILYCIDLEKTIAPKVRFLQEMGIPNEA 440

Query: 129 LGRFISKHSTLLTVSLEKKLMPSVEIL---KSVFPKDECNSDLLQGMQRCCDKLMRSPYT 188
           +G  + K  +LLT SL KK+ P V  L     V  KD      +      C     S  T
Sbjct: 441 IGNMLVKFPSLLTNSLYKKIRPVVIFLLTRAGVTQKDIGKVIAMDPALLGC-----SIGT 500

Query: 189 RLLVNINYLQSCGIVGSQLSMLLKRQPALFG------------KRESQVREIVSMV-VET 248
           +L  N+ Y  S GI   QL  ++   P L               R + +R +  ++    
Sbjct: 501 KLEPNMRYYISLGIRFYQLGEMIADFPMLLRYNVDNLRPKYRYLRRTMIRPLQDLIEFPR 560

Query: 249 GFSTNTKMFVHGLHAISSVTNATFKKKVELICS 266
            FS + +  +   H I       FK +  L C+
Sbjct: 561 FFSYSLERRIIPRHTIMVENRVNFKLRYMLACT 588

[Close]

BLAST of CmoCh16G007270 vs. ExPASy Swiss-Prot
Match: Q84X53 (Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF1 PE=2 SV=2)

HSP 1 Score: 46.2 bits (108), Expect = 9.8e-04
Identity = 39/147 (26.53%), Postives = 71/147 (48.30%), Query Frame = 0


Query: 15  NPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARAVSIMRSRRGIESTE 74
           +P   LR++P L           A  S  + V+ L+ +  LS      I+     +  T 
Sbjct: 46  DPHKALRVNPSL---------RSAPISSVVSVETLLSSTGLSRPAVGRILDMFPDL-LTS 105

Query: 75  KPQS----VYKYLS-ELGFSKAHIQSTIRLAPQIAFSNIEKTLKPKIEFFQNFGLVGSDL 134
            P+S    V ++LS E+  S+  I  +I   P++  S+++  L+P + F +  G VG D 
Sbjct: 106 DPESEILPVLRFLSNEISISEQDIPKSISRCPRLLISSVDYQLRPALTFLKTLGFVGRD- 165

Query: 135 GRFISKHSTLLTVSLEKKLMPSVEILK 157
               S+++ LL  ++E+ L+P +E L+
Sbjct: 166 -TITSRNTVLLVSNVERTLIPKIEYLE 180

[Close]

BLAST of CmoCh16G007270 vs. ExPASy TrEMBL
Match: A0A6J1END2 (uncharacterized protein LOC111436067 OS=Cucurbita moschata OX=3662 GN=LOC111436067 PE=3 SV=1)

HSP 1 Score: 763.5 bits (1970), Expect = 4.4e-217
Identity = 391/391 (100.00%), Postives = 391/391 (100.00%), Query Frame = 0


Query: 1   MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60
           MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA
Sbjct: 1   MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60

Query: 61  VSIMRSRRGIESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIEKTLKPKIEFFQ 120
           VSIMRSRRGIESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIEKTLKPKIEFFQ
Sbjct: 61  VSIMRSRRGIESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIEKTLKPKIEFFQ 120

Query: 121 NFGLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILKSVFPKDECNSDLLQGMQRCCDKLM 180
           NFGLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILKSVFPKDECNSDLLQGMQRCCDKLM
Sbjct: 121 NFGLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILKSVFPKDECNSDLLQGMQRCCDKLM 180

Query: 181 RSPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGKRESQVREIVSMVVETGFSTNTKM 240
           RSPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGKRESQVREIVSMVVETGFSTNTKM
Sbjct: 181 RSPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGKRESQVREIVSMVVETGFSTNTKM 240

Query: 241 FVHGLHAISSVTNATFKKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMN 300
           FVHGLHAISSVTNATFKKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMN
Sbjct: 241 FVHGLHAISSVTNATFKKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMN 300

Query: 301 EAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSKSLLKKHPQLLDILGMSDEDFLDK 360
           EAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSKSLLKKHPQLLDILGMSDEDFLDK
Sbjct: 301 EAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSKSLLKKHPQLLDILGMSDEDFLDK 360

Query: 361 FVHRFPDHVIELLAAFRGQCMDELQPKQLET 392
           FVHRFPDHVIELLAAFRGQCMDELQPKQLET
Sbjct: 361 FVHRFPDHVIELLAAFRGQCMDELQPKQLET 391

[Close]

BLAST of CmoCh16G007270 vs. ExPASy TrEMBL
Match: A0A6J1EN21 (uncharacterized protein LOC111435860 OS=Cucurbita moschata OX=3662 GN=LOC111435860 PE=4 SV=1)

HSP 1 Score: 728.0 bits (1878), Expect = 2.1e-206
Identity = 373/391 (95.40%), Postives = 382/391 (97.70%), Query Frame = 0


Query: 1   MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60
           MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA
Sbjct: 1   MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60

Query: 61  VSIMRSRRGIESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIEKTLKPKIEFFQ 120
           VSIMRSRRG+ESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIE+TLKPKIEFFQ
Sbjct: 61  VSIMRSRRGLESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQ 120

Query: 121 NFGLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILKSVFPKDECNSDLLQGMQRCCDKLM 180
           N GLVGSDLGRFISKHSTLLTVSLEK+LMPSVEILKSVFPKDECNSDLLQ MQRC D LM
Sbjct: 121 NLGLVGSDLGRFISKHSTLLTVSLEKRLMPSVEILKSVFPKDECNSDLLQVMQRCSDMLM 180

Query: 181 RSPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGKRESQVREIVSMVVETGFSTNTKM 240
           RSPYTRLLVNI+YLQSCGIVGSQLSMLLKRQPALFG RESQVR+IVSMVVETGFSTNTKM
Sbjct: 181 RSPYTRLLVNISYLQSCGIVGSQLSMLLKRQPALFGMRESQVRDIVSMVVETGFSTNTKM 240

Query: 241 FVHGLHAISSVTNATFKKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMN 300
           FVHGLH+ISSV+NATFKKKVELICSFGITEKECMRMFTSAP LIRTSVGKLKRGLEFFMN
Sbjct: 241 FVHGLHSISSVSNATFKKKVELICSFGITEKECMRMFTSAPGLIRTSVGKLKRGLEFFMN 300

Query: 301 EAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSKSLLKKHPQLLDILGMSDEDFLDK 360
           EAEVSRSDIV KPTCLMHAMQGRVLPRYRVLQVVKSK LL+KHPQLLDILGMSDEDFLDK
Sbjct: 301 EAEVSRSDIVCKPTCLMHAMQGRVLPRYRVLQVVKSKRLLEKHPQLLDILGMSDEDFLDK 360

Query: 361 FVHRFPDHVIELLAAFRGQCMDELQPKQLET 392
           FVHRFPDHV ELLAAFRGQCMDELQPK+LET
Sbjct: 361 FVHRFPDHVTELLAAFRGQCMDELQPKELET 391

[Close]

BLAST of CmoCh16G007270 vs. ExPASy TrEMBL
Match: A0A6J1JB80 (uncharacterized protein LOC111482884 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482884 PE=3 SV=1)

HSP 1 Score: 713.8 bits (1841), Expect = 4.0e-202
Identity = 365/391 (93.35%), Postives = 377/391 (96.42%), Query Frame = 0


Query: 1   MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60
           MYALRSSFSISSRHNP SLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA
Sbjct: 1   MYALRSSFSISSRHNPPSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60

Query: 61  VSIMRSRRGIESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIEKTLKPKIEFFQ 120
           VSIM SRRGI STEKPQSVYKYLSELGFS+AHIQSTIRLAPQIAFSNIEKTLKPKIEFFQ
Sbjct: 61  VSIMSSRRGIASTEKPQSVYKYLSELGFSEAHIQSTIRLAPQIAFSNIEKTLKPKIEFFQ 120

Query: 121 NFGLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILKSVFPKDECNSDLLQGMQRCCDKLM 180
           N GLVGSDLGRFISKHSTLLT+SLEK+LMPSVEILKSVFPKDECNSDLLQ ++RC D LM
Sbjct: 121 NLGLVGSDLGRFISKHSTLLTISLEKRLMPSVEILKSVFPKDECNSDLLQVLRRCSDMLM 180

Query: 181 RSPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGKRESQVREIVSMVVETGFSTNTKM 240
           RSPYTRL VNINYLQSCGIVGSQLSMLLKRQPALFG RESQVR++VSMVVETGFSTNT+M
Sbjct: 181 RSPYTRLPVNINYLQSCGIVGSQLSMLLKRQPALFGMRESQVRDLVSMVVETGFSTNTRM 240

Query: 241 FVHGLHAISSVTNATFKKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMN 300
           FVHGLHAISSV+NATFKKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMN
Sbjct: 241 FVHGLHAISSVSNATFKKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMN 300

Query: 301 EAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSKSLLKKHPQLLDILGMSDEDFLDK 360
           EAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVV SK L KKH QL+DILGMSDE+FLDK
Sbjct: 301 EAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVNSKRLSKKHLQLIDILGMSDENFLDK 360

Query: 361 FVHRFPDHVIELLAAFRGQCMDELQPKQLET 392
           FVHRFPDHV ELLAAFRGQCMDELQPK+LET
Sbjct: 361 FVHRFPDHVTELLAAFRGQCMDELQPKELET 391

[Close]

BLAST of CmoCh16G007270 vs. ExPASy TrEMBL
Match: A0A6J1J5Y4 (uncharacterized protein LOC111482884 isoform X4 OS=Cucurbita maxima OX=3661 GN=LOC111482884 PE=3 SV=1)

HSP 1 Score: 703.4 bits (1814), Expect = 5.4e-199
Identity = 362/387 (93.54%), Postives = 370/387 (95.61%), Query Frame = 0


Query: 1   MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60
           MYALRSSFSISSRHNP SLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA
Sbjct: 1   MYALRSSFSISSRHNPPSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60

Query: 61  VSIMRSRRGIESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIEKTLKPKIEFFQ 120
           VSIM SRRGI STEKPQSVYKYLSELGFS+AHIQSTIRLAPQIAFSNIEKTLKPKIEFFQ
Sbjct: 61  VSIMSSRRGIASTEKPQSVYKYLSELGFSEAHIQSTIRLAPQIAFSNIEKTLKPKIEFFQ 120

Query: 121 NFGLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILKSVFPKDECNSDLLQGMQRCCDKLM 180
           N GLVGSDLG FISKHSTLLT+SLEK+LMPSVEILKSVFPKDECNSD LQ M+RC D L 
Sbjct: 121 NLGLVGSDLGWFISKHSTLLTISLEKRLMPSVEILKSVFPKDECNSDFLQVMRRCSDMLK 180

Query: 181 RSPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGKRESQVREIVSMVVETGFSTNTKM 240
           RSPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFG RESQVR+IVSMVVETGFSTNTKM
Sbjct: 181 RSPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGMRESQVRDIVSMVVETGFSTNTKM 240

Query: 241 FVHGLHAISSVTNATFKKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMN 300
           FVHGLHAISSV+NATFKKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMN
Sbjct: 241 FVHGLHAISSVSNATFKKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMN 300

Query: 301 EAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSKSLLKKHPQLLDILGMSDEDFLDK 360
           EAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVV SK L KKH QL+DILGMSDE+FLDK
Sbjct: 301 EAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVNSKRLSKKHLQLIDILGMSDENFLDK 360

Query: 361 FVHRFPDHVIELLAAFRGQCMDELQPK 388
           FVHRFPD V ELLAAFRGQCMDELQPK
Sbjct: 361 FVHRFPDQVTELLAAFRGQCMDELQPK 387

[Close]

BLAST of CmoCh16G007270 vs. ExPASy TrEMBL
Match: A0A6J1C8W1 (uncharacterized protein LOC111008506 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111008506 PE=3 SV=1)

HSP 1 Score: 563.9 bits (1452), Expect = 5.2e-157
Identity = 291/390 (74.62%), Postives = 338/390 (86.67%), Query Frame = 0


Query: 1   MYALRSSFSISSRH-NPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPAR 60
           MYALRS FS+S+RH +P       PL Y F SSSS  +ASA+  IVVQYL+D F LS AR
Sbjct: 1   MYALRSIFSLSARHCHPID----PPLCYFFSSSSSRREASAANAIVVQYLVDNFNLSTAR 60

Query: 61  AVSIMRSRRGIESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIEKTLKPKIEFF 120
           A++IM  R+G+ESTEKP+SV KYLSELGFS AHIQS IR++PQIAFS++EKTLKPKIEFF
Sbjct: 61  ALAIMSCRKGVESTEKPRSVCKYLSELGFSDAHIQSAIRISPQIAFSSVEKTLKPKIEFF 120

Query: 121 QNFGLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILKSVFPKDECNSDLLQGMQRCCDKL 180
           QN GLVGSDLG+FIS HS+LLTVSL+ KL PSVEILK+VFPKDE NS+LLQ M+RC D L
Sbjct: 121 QNLGLVGSDLGKFISNHSSLLTVSLKNKLRPSVEILKNVFPKDEDNSNLLQVMRRCSDIL 180

Query: 181 MRSPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGKRESQVREIVSMVVETGFSTNTK 240
           MR P +RLLVNINY +SCGIV SQLSMLLKRQP LFG+RES+VR++VSM VETGFSTNTK
Sbjct: 181 MRCPESRLLVNINYFRSCGIVDSQLSMLLKRQPVLFGRRESRVRDLVSMAVETGFSTNTK 240

Query: 241 MFVHGLHAISSVTNATFKKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFM 300
           MFVHGLHAISSV+NATFKKKVELICSFG TEKECM+MFTSAPVLIRTS+ KLK G+EFFM
Sbjct: 241 MFVHGLHAISSVSNATFKKKVELICSFGFTEKECMKMFTSAPVLIRTSIAKLKTGIEFFM 300

Query: 301 NEAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSKSLLKKHPQLLDILGMSDEDFLD 360
           NEA+VSRS IVR+PT LMH+MQGRVLPRYRVLQVVKSK L +K+P+L+D LG+S+EDF D
Sbjct: 301 NEAKVSRSLIVRRPTSLMHSMQGRVLPRYRVLQVVKSKRLTRKNPELVDTLGISEEDFFD 360

Query: 361 KFVHRFPDHVIELLAAFRGQCMDELQPKQL 390
           KFV+RFPD+V +LL A+ GQC+D L+ K+L
Sbjct: 361 KFVYRFPDNVEDLLVAYSGQCVDALRRKEL 386

[Close]

BLAST of CmoCh16G007270 vs. NCBI nr
Match: XP_022929526.1 (uncharacterized protein LOC111436067 [Cucurbita moschata])

HSP 1 Score: 763.5 bits (1970), Expect = 9.2e-217
Identity = 391/391 (100.00%), Postives = 391/391 (100.00%), Query Frame = 0


Query: 1   MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60
           MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA
Sbjct: 1   MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60

Query: 61  VSIMRSRRGIESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIEKTLKPKIEFFQ 120
           VSIMRSRRGIESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIEKTLKPKIEFFQ
Sbjct: 61  VSIMRSRRGIESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIEKTLKPKIEFFQ 120

Query: 121 NFGLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILKSVFPKDECNSDLLQGMQRCCDKLM 180
           NFGLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILKSVFPKDECNSDLLQGMQRCCDKLM
Sbjct: 121 NFGLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILKSVFPKDECNSDLLQGMQRCCDKLM 180

Query: 181 RSPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGKRESQVREIVSMVVETGFSTNTKM 240
           RSPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGKRESQVREIVSMVVETGFSTNTKM
Sbjct: 181 RSPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGKRESQVREIVSMVVETGFSTNTKM 240

Query: 241 FVHGLHAISSVTNATFKKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMN 300
           FVHGLHAISSVTNATFKKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMN
Sbjct: 241 FVHGLHAISSVTNATFKKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMN 300

Query: 301 EAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSKSLLKKHPQLLDILGMSDEDFLDK 360
           EAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSKSLLKKHPQLLDILGMSDEDFLDK
Sbjct: 301 EAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSKSLLKKHPQLLDILGMSDEDFLDK 360

Query: 361 FVHRFPDHVIELLAAFRGQCMDELQPKQLET 392
           FVHRFPDHVIELLAAFRGQCMDELQPKQLET
Sbjct: 361 FVHRFPDHVIELLAAFRGQCMDELQPKQLET 391

[Close]

BLAST of CmoCh16G007270 vs. NCBI nr
Match: KAG7015351.1 (Transcription termination factor MTERF8, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 745.3 bits (1923), Expect = 2.6e-211
Identity = 382/391 (97.70%), Postives = 387/391 (98.98%), Query Frame = 0


Query: 1   MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60
           MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA
Sbjct: 1   MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60

Query: 61  VSIMRSRRGIESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIEKTLKPKIEFFQ 120
           VSIMRSRRGI+STEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIE+TLKPKIEFFQ
Sbjct: 61  VSIMRSRRGIKSTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQ 120

Query: 121 NFGLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILKSVFPKDECNSDLLQGMQRCCDKLM 180
           N GLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILKSVFPKDECNSDLLQ MQRC DKLM
Sbjct: 121 NLGLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILKSVFPKDECNSDLLQVMQRCSDKLM 180

Query: 181 RSPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGKRESQVREIVSMVVETGFSTNTKM 240
           RSPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGKRESQVR+IVSMVVETGFSTNTKM
Sbjct: 181 RSPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGKRESQVRDIVSMVVETGFSTNTKM 240

Query: 241 FVHGLHAISSVTNATFKKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMN 300
           FVHGLHAISSVTNATF+KKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMN
Sbjct: 241 FVHGLHAISSVTNATFQKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMN 300

Query: 301 EAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSKSLLKKHPQLLDILGMSDEDFLDK 360
           EAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSKSLLKKHPQLLDILGMSDEDFLDK
Sbjct: 301 EAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSKSLLKKHPQLLDILGMSDEDFLDK 360

Query: 361 FVHRFPDHVIELLAAFRGQCMDELQPKQLET 392
           FVHRFPDHV ELLAAFRGQCMDELQPK+LET
Sbjct: 361 FVHRFPDHVTELLAAFRGQCMDELQPKELET 391

[Close]

BLAST of CmoCh16G007270 vs. NCBI nr
Match: XP_023552362.1 (uncharacterized protein LOC111810052 isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 741.9 bits (1914), Expect = 2.9e-210
Identity = 379/391 (96.93%), Postives = 385/391 (98.47%), Query Frame = 0


Query: 1   MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60
           MYALRSSFSISSR+NPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA
Sbjct: 1   MYALRSSFSISSRYNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60

Query: 61  VSIMRSRRGIESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIEKTLKPKIEFFQ 120
           VSIMRSRRGIESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIEKTLKPKIEFFQ
Sbjct: 61  VSIMRSRRGIESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIEKTLKPKIEFFQ 120

Query: 121 NFGLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILKSVFPKDECNSDLLQGMQRCCDKLM 180
           N GLVGSDLGRFISKHSTLLTVSLEKKLMPSVEIL+SVFPKDECNSDLLQGMQRCCDKLM
Sbjct: 121 NLGLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILQSVFPKDECNSDLLQGMQRCCDKLM 180

Query: 181 RSPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGKRESQVREIVSMVVETGFSTNTKM 240
           R PYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGKRESQVR+IVSMVVETGFSTNTKM
Sbjct: 181 RFPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGKRESQVRDIVSMVVETGFSTNTKM 240

Query: 241 FVHGLHAISSVTNATFKKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMN 300
           FVHGLHAISSVTNATFKKKVELICSFGITEKECMRMFTSAPVLIRTS GKLKRGLEFFMN
Sbjct: 241 FVHGLHAISSVTNATFKKKVELICSFGITEKECMRMFTSAPVLIRTSGGKLKRGLEFFMN 300

Query: 301 EAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSKSLLKKHPQLLDILGMSDEDFLDK 360
           EAEVSRSDIVRKPTCLMHAM+GRVLPRYRVLQVVKSK LL KHPQL+DILGMSDEDFLDK
Sbjct: 301 EAEVSRSDIVRKPTCLMHAMEGRVLPRYRVLQVVKSKRLLMKHPQLIDILGMSDEDFLDK 360

Query: 361 FVHRFPDHVIELLAAFRGQCMDELQPKQLET 392
           FVHRFPDHV ELLAAFRGQCMDELQPK+LET
Sbjct: 361 FVHRFPDHVTELLAAFRGQCMDELQPKELET 391

[Close]

BLAST of CmoCh16G007270 vs. NCBI nr
Match: XP_023552360.1 (uncharacterized protein LOC111810052 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023552361.1 uncharacterized protein LOC111810052 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 740.7 bits (1911), Expect = 6.4e-210
Identity = 378/391 (96.68%), Postives = 385/391 (98.47%), Query Frame = 0


Query: 1   MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60
           MYALRSSFSISSR+NPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA
Sbjct: 1   MYALRSSFSISSRYNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60

Query: 61  VSIMRSRRGIESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIEKTLKPKIEFFQ 120
           VSIMRSRRGIESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIE+TLKPKIEFFQ
Sbjct: 61  VSIMRSRRGIESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQ 120

Query: 121 NFGLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILKSVFPKDECNSDLLQGMQRCCDKLM 180
           N GLVGSDLGRFISKHSTLLTVSLEKKLMPSVEIL+SVFPKDECNSDLLQGMQRCCDKLM
Sbjct: 121 NLGLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILQSVFPKDECNSDLLQGMQRCCDKLM 180

Query: 181 RSPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGKRESQVREIVSMVVETGFSTNTKM 240
           R PYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGKRESQVR+IVSMVVETGFSTNTKM
Sbjct: 181 RFPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGKRESQVRDIVSMVVETGFSTNTKM 240

Query: 241 FVHGLHAISSVTNATFKKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMN 300
           FVHGLHAISSVTNATFKKKVELICSFGITEKECMRMFTSAPVLIRTS GKLKRGLEFFMN
Sbjct: 241 FVHGLHAISSVTNATFKKKVELICSFGITEKECMRMFTSAPVLIRTSGGKLKRGLEFFMN 300

Query: 301 EAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSKSLLKKHPQLLDILGMSDEDFLDK 360
           EAEVSRSDIVRKPTCLMHAM+GRVLPRYRVLQVVKSK LL KHPQL+DILGMSDEDFLDK
Sbjct: 301 EAEVSRSDIVRKPTCLMHAMEGRVLPRYRVLQVVKSKRLLMKHPQLIDILGMSDEDFLDK 360

Query: 361 FVHRFPDHVIELLAAFRGQCMDELQPKQLET 392
           FVHRFPDHV ELLAAFRGQCMDELQPK+LET
Sbjct: 361 FVHRFPDHVTELLAAFRGQCMDELQPKELET 391

[Close]

BLAST of CmoCh16G007270 vs. NCBI nr
Match: XP_022929189.1 (uncharacterized protein LOC111435860 [Cucurbita moschata])

HSP 1 Score: 728.0 bits (1878), Expect = 4.3e-206
Identity = 373/391 (95.40%), Postives = 382/391 (97.70%), Query Frame = 0


Query: 1   MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60
           MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA
Sbjct: 1   MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60

Query: 61  VSIMRSRRGIESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIEKTLKPKIEFFQ 120
           VSIMRSRRG+ESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIE+TLKPKIEFFQ
Sbjct: 61  VSIMRSRRGLESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQ 120

Query: 121 NFGLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILKSVFPKDECNSDLLQGMQRCCDKLM 180
           N GLVGSDLGRFISKHSTLLTVSLEK+LMPSVEILKSVFPKDECNSDLLQ MQRC D LM
Sbjct: 121 NLGLVGSDLGRFISKHSTLLTVSLEKRLMPSVEILKSVFPKDECNSDLLQVMQRCSDMLM 180

Query: 181 RSPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGKRESQVREIVSMVVETGFSTNTKM 240
           RSPYTRLLVNI+YLQSCGIVGSQLSMLLKRQPALFG RESQVR+IVSMVVETGFSTNTKM
Sbjct: 181 RSPYTRLLVNISYLQSCGIVGSQLSMLLKRQPALFGMRESQVRDIVSMVVETGFSTNTKM 240

Query: 241 FVHGLHAISSVTNATFKKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMN 300
           FVHGLH+ISSV+NATFKKKVELICSFGITEKECMRMFTSAP LIRTSVGKLKRGLEFFMN
Sbjct: 241 FVHGLHSISSVSNATFKKKVELICSFGITEKECMRMFTSAPGLIRTSVGKLKRGLEFFMN 300

Query: 301 EAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSKSLLKKHPQLLDILGMSDEDFLDK 360
           EAEVSRSDIV KPTCLMHAMQGRVLPRYRVLQVVKSK LL+KHPQLLDILGMSDEDFLDK
Sbjct: 301 EAEVSRSDIVCKPTCLMHAMQGRVLPRYRVLQVVKSKRLLEKHPQLLDILGMSDEDFLDK 360

Query: 361 FVHRFPDHVIELLAAFRGQCMDELQPKQLET 392
           FVHRFPDHV ELLAAFRGQCMDELQPK+LET
Sbjct: 361 FVHRFPDHVTELLAAFRGQCMDELQPKELET 391

[Close]

BLAST of CmoCh16G007270 vs. TAIR 10
Match: AT5G64950.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 247.3 bits (630), Expect = 2.1e-65
Identity = 148/368 (40.22%), Postives = 228/368 (61.96%), Query Frame = 0


Query: 21  RIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARAVSIMRSRRGIESTEKPQSVY 80
           R D  L     SS+ + AS S    V++L D     P  A++I      ++S E+P+SV 
Sbjct: 17  RWDRALSLHHFSSNATPASISNPAFVEFLRDNGFQKPL-AIAIAMRYPNLKSLEQPRSVI 76

Query: 81  KYLSELGFSKAHIQSTIRLAPQIAFSNIEKTLKPKIEFFQNFGLVGSDLGRFISKHSTLL 140
           + L    FS   IQ +IR+ P++ F N+EK L+PK+ FF++ G  GS LG+F+S++S+++
Sbjct: 77  QMLKSYSFSDTQIQKSIRVHPRMMFYNVEKILEPKLRFFKDIGFTGSGLGKFVSQNSSVV 136

Query: 141 TVSLEKKLMPSVEILKS-VFPKDECNSDLLQGMQRCCDKLM-RSPYTRLLVNINYLQSCG 200
            VSL KKL+P+VEILKS V PK E   DL   + RC   L+ R P   LL NI+YL++CG
Sbjct: 137 GVSLVKKLIPTVEILKSIVAPKHE---DLPVILSRCGWLLLSRDPNLFLLPNISYLETCG 196

Query: 201 IVGSQLSMLLKRQPALFGKRESQVREIVSMVVETGFSTNTKMFVHGLHAISSVTNATFKK 260
           IVGSQL+ LL+RQP +F   E ++R  VS  ++ GF+ N++M VH + ++SS++  TF +
Sbjct: 197 IVGSQLASLLRRQPRIFNLSEEKLRGYVSRALDLGFTLNSRMLVHAVISLSSLSEKTFDR 256

Query: 261 KVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMNEAEVSRSDIVRKPTCLMH 320
           KV+L  + G +E E   +   +P LIR S  KL  G EF++    + R  + ++P  L +
Sbjct: 257 KVKLFMANGFSEDEITDIIRRSPGLIRCSEDKLTLGFEFYLKRMGLEREALAKRPCVLSY 316

Query: 321 AMQGRVLPRYRVLQVVKSKSLL----KKHPQLLDILGMSDEDFLDKFVHRFPDHVI-ELL 380
            ++ RV+PR +VLQ+++ K LL    KK   ++ I+ M++E FL+K+V RF D +  ELL
Sbjct: 317 NLEKRVIPRLKVLQILREKGLLLKEEKKKKNMVGIVEMTEEAFLEKYVVRFGDEIAEELL 376

Query: 381 AAFRGQCM 382
            A++  C+
Sbjct: 377 VAYKCVCL 380

[Close]

BLAST of CmoCh16G007270 vs. TAIR 10
Match: AT5G07900.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 154.1 bits (388), Expect = 2.4e-37
Identity = 98/334 (29.34%), Postives = 171/334 (51.20%), Query Frame = 0


Query: 46  VQYLIDTFELSPARAVSIMRSRRGIESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAF 105
           + YLID+  LSP  A ++   +  ++S E+P +V   L + GF+ A I S ++  P +  
Sbjct: 72  LNYLIDSCGLSPDSA-TVASRKLLLDSPERPNTVLNLLRDHGFTTAQISSLVKKRPVLLL 131

Query: 106 SNIEKTLKPKIEFFQNFGLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILKSVFPKDECN 165
           +N E  L PK+ FF + G+  S L R ++   T+LT SL  +L+PS   LKSV   DE  
Sbjct: 132 ANAESVLLPKLSFFLSIGVSKSLLARTLASDPTILTRSLVNQLIPSYNFLKSVLDSDE-- 191

Query: 166 SDLLQGMQRCCDKLMRSPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGKRESQVREI 225
             ++  ++R     +      L+ NINY+   G+    + +LL   P    ++  + + I
Sbjct: 192 -KIVAALRRTTWVFLEDHTKNLVPNINYMAETGVPEKCIKLLLTHFPEAVMQKNHEFQAI 251

Query: 226 VSMVVETGFSTNTKMFVHGLHAISSVTN-ATFKKKVELICSFGITEKECMRMFTSAPVLI 285
                E GF+     FV  +HA+S   N + + K  E+   +G +E + M  F   P  +
Sbjct: 252 AKQAQEMGFNPQKSTFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKKHPHCM 311

Query: 286 RTSVGKLKRGLEFFMNEAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSKSLLKKHP 345
             S  K+ R +E+F+NE  ++   I + P  L  +++ R++PR  V +V+ S  L+K+  
Sbjct: 312 MLSERKINRTMEYFVNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSNGLVKEDW 371

Query: 346 QLLDILGMSDEDFLDKFVHRFPDHVIELLAAFRG 379
            L  +L   ++ FL+K V ++ + + EL+  + G
Sbjct: 372 SLTSLLVPVEKVFLEKLVIKYEEELPELMNLYLG 401

[Close]

BLAST of CmoCh16G007270 vs. TAIR 10
Match: AT1G21150.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 143.7 bits (361), Expect = 3.2e-34
Identity = 94/347 (27.09%), Postives = 167/347 (48.13%), Query Frame = 0


Query: 31  SSSSHSQASASYGIVVQYLIDTFELSPARAVSIMRSRRGIESTEKPQSVYKYLSELGFSK 90
           S +   Q        V YL+D+  LS   A S  R  + + S++KP SV     + GF+ 
Sbjct: 44  SENLEKQKPCLESFTVSYLVDSCGLSLESAKSNSRFVK-LVSSKKPDSVLALFKDHGFTN 103

Query: 91  AHIQSTIRLAPQIAFSNIEKTLKPKIEFFQNFGLVGSDLGRFISKHSTLLTVSLEKKLMP 150
             I S I+  P++   + E  + PK+ FF + G   SD  + IS    +L+ SL K+L+P
Sbjct: 104 DQITSVIKSFPRVLSLSPEDVISPKLMFFSSIGFSTSDTAKMISSSPKMLSYSLHKRLIP 163

Query: 151 SVEILKSVFPKDECNSDLLQGMQRCCDKLMRSPYTRLLVNINYLQSCGIVGSQLSMLLKR 210
             + LKS+  ++E     L+   RC    +    +   + ++  +  G+    +  L++ 
Sbjct: 164 CYDSLKSILVEEESVVKCLKRGIRCFSLKITHCVS---LRVSICRELGVPDKSIKWLVQA 223

Query: 211 QPALFGKRESQVREIVSMVVETGFSTNTKMFVHGLHAISSVTNATFKKKVELICSFGITE 270
            P  F  RE +  E+++ V   GF      FVH + A    + +  ++K +L   FG ++
Sbjct: 224 SPFTFFSRERRFNEVLNRVCSYGFDPKKAGFVHAMVAFDCTSESAMERKFKLFQCFGWSK 283

Query: 271 KECMRMFTSAPVLIRTSVGKLKRGLEFFMNEAEVSRSDIVRKPTCLMHAMQGRVLPRYRV 330
           ++ +      P  +  S  K+   LE+ +N   +   DIV +P  L  +M+ R+ PR +V
Sbjct: 284 EDFVAAIMRFPNCVTVSDEKIMYTLEYLVNNIGLQARDIVARPVVLSLSMEKRIKPRNQV 343

Query: 331 LQVVKSKSLLKKHP-QLLDILGMSDEDFLDKFVHRFPDHVIELLAAF 377
           + ++ SK L+KK       IL +   +F+DKFV ++ D + +L+  F
Sbjct: 344 ISLLLSKGLVKKEDINYFTILKLKSSEFMDKFVLKYQDEMPQLVQPF 386

[Close]

BLAST of CmoCh16G007270 vs. TAIR 10
Match: AT1G61970.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 110.2 bits (274), Expect = 3.9e-24
Identity = 97/393 (24.68%), Postives = 167/393 (42.49%), Query Frame = 0


Query: 29  FFSSSSHSQASASYG-----IVVQYLIDTFELSPARAVSIMRSRRGIESTEKPQSVYKYL 88
           FFSS+S +  S   G       V YL+D+  L+   A SI R +   E    P SV   L
Sbjct: 33  FFSSASAACLSPRVGRKGNNFTVSYLVDSLGLTTKLAESISR-KVSFEDKNNPDSVLNLL 92

Query: 89  SELGFSKAHIQSTIRLAPQIAFSNIEKTLKPKIEFFQNFGLVGSDLGRFISKHSTLLTVS 148
           +  GF+ + I + IR  PQ+  ++ EK+L PK++F Q+ G   S++   +S    +L   
Sbjct: 93  TSHGFTGSQISTIIRDYPQLLIADAEKSLGPKLQFLQSRGASSSEITEIVSSVPEILGKK 152

Query: 149 LEKKLMPSVEILKSVFPKDECNSDLLQGMQRCCDKLMRSPYTRLLVNINYLQSCGIVGSQ 208
             K +    + +K    +    ++ L      C  L +      + N++ L+  G+    
Sbjct: 153 GHKTISVYYDFIKDTLLEKSSKNEKL------CHSLPQGNLENKIRNVSVLRELGMPHKL 212

Query: 209 L-SMLLKRQPALFGKRESQVREIVSMVVETGFSTNTKMFVHGLHAISSVTNATFKKKVEL 268
           L S+L+     + GK + +  E +  VVE GF   T  FV  L  I  +   T ++KV L
Sbjct: 213 LFSLLISDSQPVCGKEKFE--ETLKKVVEMGFDPTTSKFVEALQVIYKMNEKTIEEKVHL 272

Query: 269 ICSFGITEKECMRMFTSAPVLIRTSVGKL------------------------------- 328
             S G    +    F   P+ +R S  K+                               
Sbjct: 273 YKSLGFDVGDVWSSFKKWPISLRVSEKKMLDSIETFLGLGFSRDEFAKMVKHFPPCIGLS 332

Query: 329 ----KRGLEFFMNEAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSKSLLKKH-PQL 378
               K+  EF + +       +V  P    ++++ R++PR  V++ + SK L++   P +
Sbjct: 333 TETVKKKTEFLVKKMNWPLKAVVSNPAVFGYSLEKRIVPRGNVIKALMSKGLMRNELPSI 392

[Close]

BLAST of CmoCh16G007270 vs. TAIR 10
Match: AT1G61970.2 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 110.2 bits (274), Expect = 3.9e-24
Identity = 97/393 (24.68%), Postives = 167/393 (42.49%), Query Frame = 0


Query: 29  FFSSSSHSQASASYG-----IVVQYLIDTFELSPARAVSIMRSRRGIESTEKPQSVYKYL 88
           FFSS+S +  S   G       V YL+D+  L+   A SI R +   E    P SV   L
Sbjct: 33  FFSSASAACLSPRVGRKGNNFTVSYLVDSLGLTTKLAESISR-KVSFEDKNNPDSVLNLL 92

Query: 89  SELGFSKAHIQSTIRLAPQIAFSNIEKTLKPKIEFFQNFGLVGSDLGRFISKHSTLLTVS 148
           +  GF+ + I + IR  PQ+  ++ EK+L PK++F Q+ G   S++   +S    +L   
Sbjct: 93  TSHGFTGSQISTIIRDYPQLLIADAEKSLGPKLQFLQSRGASSSEITEIVSSVPEILGKK 152

Query: 149 LEKKLMPSVEILKSVFPKDECNSDLLQGMQRCCDKLMRSPYTRLLVNINYLQSCGIVGSQ 208
             K +    + +K    +    ++ L      C  L +      + N++ L+  G+    
Sbjct: 153 GHKTISVYYDFIKDTLLEKSSKNEKL------CHSLPQGNLENKIRNVSVLRELGMPHKL 212

Query: 209 L-SMLLKRQPALFGKRESQVREIVSMVVETGFSTNTKMFVHGLHAISSVTNATFKKKVEL 268
           L S+L+     + GK + +  E +  VVE GF   T  FV  L  I  +   T ++KV L
Sbjct: 213 LFSLLISDSQPVCGKEKFE--ETLKKVVEMGFDPTTSKFVEALQVIYKMNEKTIEEKVHL 272

Query: 269 ICSFGITEKECMRMFTSAPVLIRTSVGKL------------------------------- 328
             S G    +    F   P+ +R S  K+                               
Sbjct: 273 YKSLGFDVGDVWSSFKKWPISLRVSEKKMLDSIETFLGLGFSRDEFAKMVKHFPPCIGLS 332

Query: 329 ----KRGLEFFMNEAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSKSLLKKH-PQL 378
               K+  EF + +       +V  P    ++++ R++PR  V++ + SK L++   P +
Sbjct: 333 TETVKKKTEFLVKKMNWPLKAVVSNPAVFGYSLEKRIVPRGNVIKALMSKGLMRNELPSI 392

The following BLAST results are available for this feature:

BLAST of CmoCh16G007270 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JVI3	9.5e-07	27.33	Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana O...	[more]
F4IHL3	1.4e-05	25.35	Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q84X53	9.8e-04	26.53	Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX...	[more]

BLAST of CmoCh16G007270 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1END2	4.4e-217	100.00	uncharacterized protein LOC111436067 OS=Cucurbita moschata OX=3662 GN=LOC1114360...	[more]
A0A6J1EN21	2.1e-206	95.40	uncharacterized protein LOC111435860 OS=Cucurbita moschata OX=3662 GN=LOC1114358...	[more]
A0A6J1JB80	4.0e-202	93.35	uncharacterized protein LOC111482884 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1J5Y4	5.4e-199	93.54	uncharacterized protein LOC111482884 isoform X4 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1C8W1	5.2e-157	74.62	uncharacterized protein LOC111008506 isoform X1 OS=Momordica charantia OX=3673 G...	[more]

BLAST of CmoCh16G007270 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022929526.1	9.2e-217	100.00	uncharacterized protein LOC111436067 [Cucurbita moschata]	[more]
KAG7015351.1	2.6e-211	97.70	Transcription termination factor MTERF8, chloroplastic, partial [Cucurbita argyr...	[more]
XP_023552362.1	2.9e-210	96.93	uncharacterized protein LOC111810052 isoform X3 [Cucurbita pepo subsp. pepo]	[more]
XP_023552360.1	6.4e-210	96.68	uncharacterized protein LOC111810052 isoform X1 [Cucurbita pepo subsp. pepo] >XP...	[more]
XP_022929189.1	4.3e-206	95.40	uncharacterized protein LOC111435860 [Cucurbita moschata]	[more]

BLAST of CmoCh16G007270 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G64950.1	2.1e-65	40.22	Mitochondrial transcription termination factor family protein	[more]
AT5G07900.1	2.4e-37	29.34	Mitochondrial transcription termination factor family protein	[more]
AT1G21150.1	3.2e-34	27.09	Mitochondrial transcription termination factor family protein	[more]
AT1G61970.1	3.9e-24	24.68	Mitochondrial transcription termination factor family protein	[more]
AT1G61970.2	3.9e-24	24.68	Mitochondrial transcription termination factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 170..200 e-value: 1700.0 score: 2.1 coord: 130..162 e-value: 4.7 score: 16.2 coord: 239..269 e-value: 2800.0 score: 0.5 coord: 205..235 e-value: 3.8 score: 16.5 coord: 306..337 e-value: 590.0 score: 5.7 coord: 274..305 e-value: 9.4 score: 15.2 coord: 94..125 e-value: 0.27 score: 20.3
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 189..358 e-value: 3.0E-19 score: 69.1 coord: 81..237 e-value: 3.8E-16 score: 58.9
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 31..378
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	1.25.70.10	Transcription termination factor 3, mitochondrial	coord: 163..369 e-value: 1.2E-35 score: 124.9
None	No IPR available	PANTHER	PTHR13068:SF173	EMB\|CAB62602.1	coord: 31..378

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh16G007270.1	CmoCh16G007270.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006353	DNA-templated transcription, termination
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003690	double-stranded DNA binding