CmoCh16G007170 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTTCGTTCAAAGAAGCATTCTCAAAGTCATAATCACCATAATAATGATTCTACACAAGAAGACGGGAAGGTAACAATCCAGTTAATTCTTATCAACAATAGCTTTCATGTTGTTAGATTGAATGGTTGGATAAATATCATACAATGATTGTTTTTTATCCTTTCTCGCATCTCTGGAAACTTATCTAAATATATTGAAGCCAAAGTGTAGATTGGGTGTTAATATTTTCAGGGGAAATTAAAGTTCTGAAGTCTTGGGGTCAGGTAAATTAGTATCCTTGCGTTGAAATATCATTTCCCATCTCAAATTTAATTTTCTTAACATCTTTATAGCTCGCTGCTGTAACCTTCATAGCTCCTGACCAGATTCCACCGTCCCCATCCAAACTAACATTTTTCATGAATTATAGATAATTATGTACTTTTATCAATTTTATCCTTCATGTCCGTTCTTCTTATTGCGAGTTAACGCATCAAGTTTTCAGATATAAGAGCTGTTTTCATTCGCACAAGTTTGTGCAGTTCTTGACTCAGATACTATAAGTCGAAAAGAACTTTAAGAACAGGATTAGAAATATATGAATACTTAAGGGTGAAATAATTTAATTATGTTTTATGAAGAACGGCGTAACTAACTATTTTTCCCGTACAGATCAATGAACTTAGGGCTGCTCTTGGGCCTCTGTCTAGTCGAAGTTCAAAGTATTGCACCGATGCATGTCTGAGGAGATATTTGATAGCTCGAAACTGGAATGTTGAGAAGGCAAGGAAAATGCTAGAAGAGACGCTCAAGTGGAGGGCAGCTTACAAGCCCGAAGAAATCCGTTGGGTAAGCTAAATTATACAACTTTGTATCCCTCAAACATCTAACAAAAATTTTAGTTTTCTAAATTTTATTCTTTGCACTTTGCTTCCCCACGACCTTGCTATGAATGTAATGGATTTTTTTTTTTTCCTCTTTTAGTTCATTTTTATTGTCATATTTTTCTCTATGAAATTTACTCGTACGTTGCATTCCATGGAATCAAGGTTTTTTAAGAAGCATTTTTCTGATACAGCATGAAGTAGCATTTGAAGGCGAGACTGGAAAAGTGTCGAGAGCAGATTTTTGCGATCGACAGGGAAGATCTGTGCTCATAATGAGACCTGGAATGCAGGTATATTTGCTGGTCCCCACTTTTCCTTATAGTTTTTAATGTCATCATGAACTCTTATTTTCTCATAATAACTACTATTCAAAATTCTTTTTTTTTTTTTAAATAAAACAAACCATGTTAAATCACAATATGTTTAATTTTTTAACATACCAATAAAAAAATCGTGTATAAAAGTTCGAAAAAAAAAAACTCTAAGGTACTTTTTGAACTTAAATATAATTCAACTAGTTGAAATATTTATAGCCATATTTAAATCTTTTTCTTCCGTGATAAACTGAAAAAAGAATAAAAAGAGACACTTGAATTAAAAAAATAAAGTATAGAAGTGATCCAATTTGTTAGATGAACACGACTCTCGATAGTAATATAATTTTGTCTATTTTGAGCATAAGGCTCTCCTAACTTTGTTTGAATATAATTTAAAATAGTATTATTTGAATATAAACTCATTATCCTTCCCTAGATTAACCTTAGGACTTTCATTCAACACAATTGATATTTATAAGTGCTGATCTTTTTGTTTTGTTTTGTTTTTGTTTTTTTTTGGCATTTCACTTTCTGACTATTTCCAGTACCCACTTTTAAATTCTTTCAGAACACAACTCCATCAGAAGTCAGCGTGCGGCATCTAGTCTATCTTCTAGAGAATGCGATTCTGAACCTTGTTGAGGGTCAAGAACAAATGTGTTGGTTAATAGATTTCACCGGATTTACAATGAAAACCAATGTCTCCGTCAAAATAGCCTCCGATGTTATCAATATCTTGCAGAACCATTACCCGGAAAGACTTGCCGTTGCATTCCTCTACAATCCACCCAAGATTTTTCAAGCCTTCTGGAAGGTATGCTCTGCTCTTTAATTCCATTCACTTATCTATCACATTTCTTCTCCAAATTCATCAATATTAGCCATCCTTTTCCAATTTTTTATAGGCTATCAAGTACTTCTTAGATCCAAAGACATCTCAAAAGGTAAAGTTTGTAAATCCCAAAGACAAAGGAAGCGTGGAGCTGATGAAATCATACTTCGACATGGAAAACCTTCCCAGTGTGTTTGGGGGTAAAGCCACACTCGAGTATGATCACCAGCAGTTCTCTCAGATGATGGCCCAAGACGAGCTTAAAGCTGCACTAGTGTGGGGCCTTGATGAGAAGGCCCACCATATCACAAATGGGCCTTCTTCTGGCCCAGAAGTTGCACCAGAGCCCATTACTGCAACAAACTAACTAACTGGTATGTCTCCTGCCTCCCCTTTACAGCATTTTGAAACTAAAATAATAATGCAAAGGAGCTAGTAGCCATCCATAAGTAATAGTTTCTGTTTCTGCTAACTAAACCTATGAGACTGAAGGAACCTTTTGTAGTTTTATGTTAACTTAGGAGGTCAACAAAGCCCAATAATTTAGCAGCCCTCTCTTTAAAAGAAAAAAGAAACTCGTAACTTGTTTACTTGTTCCATCTATTTATTTATAATACATTATAGAGAGAGGAACCGTATCTTTAATGTTTTAGGTGCATTGCATTACAAACCCACTTGGTATAATGAATTTAGGTATATCCAAGTGTCAGATTCCACCTTCCAACTTAGGATTGTCCAAAAATTAATAAGAAAATGCCCAATAACCGTCGCTATTGTTAGACGAACACAACTCTCCACAATGGTATGATATTGTCCACTTTGAGCATAAGCTCTCATGGTTTTGCTTTGGGCTTCCCCAAAAGGCCTCATGCCAATGGAGTTAGTATTCCTCACTTATAAACCCATGATCACACCCTAAATTAGTCGATGTGGGACTTCCATCATCCAACACCTCCCCTCGAACAAAGTGCGCCTCCCCTTAATCGAGGCTCGACTCCTTTGGAGTCTTAGTCATTTTTTGACTGCCTTCGAGGAGGGGCTTAGCTCCTTTTCTTTAAGAGTTCTTTGTTCGATATTTGAAGATTTACCAATCTATTGGCACGACTAAGTTTAGGGCATGGCTCTGATACCATGTTAGACGAACACAACTCTCCACAATGGTATGATATTGTCCACTTTGAGCATAAGCTCTCATGGTTTTGCTTTGGGCTTCCCCAAAAGGCCTCATGCCAATGGAGTTAGTATTCCTCACTTATAAACCCATGATCACACCCTAAATTAGTCGATGTGGAACTTCCATCATCCAACAGCTATTACAAAAAGAACTAGCAGAAAAAGTAACGTCATAACCTAATATTGGCTTTTGAAAATCCAAGCAACCCAAGTGGATGAAAGTGTTTAACCTTCC ATGTTTCGTTCAAAGAAGCATTCTCAAAGTCATAATCACCATAATAATGATTCTACACAAGAAGACGGGAAGATCAATGAACTTAGGGCTGCTCTTGGGCCTCTGTCTAGTCGAAGTTCAAAGTATTGCACCGATGCATGTCTGAGGAGATATTTGATAGCTCGAAACTGGAATGTTGAGAAGGCAAGGAAAATGCTAGAAGAGACGCTCAAGTGGAGGGCAGCTTACAAGCCCGAAGAAATCCGTTGGCATGAAGTAGCATTTGAAGGCGAGACTGGAAAAGTGTCGAGAGCAGATTTTTGCGATCGACAGGGAAGATCTGTGCTCATAATGAGACCTGGAATGCAGAACACAACTCCATCAGAAGTCAGCGTGCGGCATCTAGTCTATCTTCTAGAGAATGCGATTCTGAACCTTGTTGAGGGTCAAGAACAAATGTGTTGGTTAATAGATTTCACCGGATTTACAATGAAAACCAATGTCTCCGTCAAAATAGCCTCCGATGTTATCAATATCTTGCAGAACCATTACCCGGAAAGACTTGCCGTTGCATTCCTCTACAATCCACCCAAGATTTTTCAAGCCTTCTGGAAGGCTATCAAGTACTTCTTAGATCCAAAGACATCTCAAAAGGTAAAGTTTGTAAATCCCAAAGACAAAGGAAGCGTGGAGCTGATGAAATCATACTTCGACATGGAAAACCTTCCCAGTGTGTTTGGGGGTAAAGCCACACTCGAGTATGATCACCAGCAGTTCTCTCAGATGATGGCCCAAGACGAGCTTAAAGCTGCACTAGTGTGGGGCCTTGATGAGAAGGCCCACCATATCACAAATGGGCCTTCTTCTGGCCCAGAAGTTGCACCAGAGCCCATTACTGCAACAAACTAACTAACTGGTATGTCTCCTGCCTCCCCTTTACAGCATTTTGAAACTAAAATAATAATGCAAAGGAGCTAGTAGCCATCCATAAGTAATAGTTTCTGTTTCTGCTAACTAAACCTATGAGACTGAAGGAACCTTTTGTAGTTTTATGTTAACTTAGGAGGTCAACAAAGCCCAATAATTTAGCAGCCCTCTCTTTAAAAGAAAAAAGAAACTCGTAACTTGTTTACTTGTTCCATCTATTTATTTATAATACATTATAGAGAGAGGAACCGTATCTTTAATGTTTTAGGTGCATTGCATTACAAACCCACTTGGTATAATGAATTTAGGTATATCCAAGTGTCAGATTCCACCTTCCAACTTAGGATTGTCCAAAAATTAATAAGAAAATGCCCAATAACCGTCGCTATTGTTAGACGAACACAACTCTCCACAATGGTATGATATTGTCCACTTTGAGCATAAGCTCTCATGGTTTTGCTTTGGGCTTCCCCAAAAGGCCTCATGCCAATGGAGTTAGTATTCCTCACTTATAAACCCATGATCACACCCTAAATTAGTCGATGTGGGACTTCCATCATCCAACACCTCCCCTCGAACAAAGTGCGCCTCCCCTTAATCGAGGCTCGACTCCTTTGGAGTCTTAGTCATTTTTTGACTGCCTTCGAGGAGGGGCTTAGCTCCTTTTCTTTAAGAGTTCTTTGTTCGATATTTGAAGATTTACCAATCTATTGGCACGACTAAGTTTAGGGCATGGCTCTGATACCATGTTAGACGAACACAACTCTCCACAATGGTATGATATTGTCCACTTTGAGCATAAGCTCTCATGGTTTTGCTTTGGGCTTCCCCAAAAGGCCTCATGCCAATGGAGTTAGTATTCCTCACTTATAAACCCATGATCACACCCTAAATTAGTCGATGTGGAACTTCCATCATCCAACAGCTATTACAAAAAGAACTAGCAGAAAAAGTAACGTCATAACCTAATATTGGCTTTTGAAAATCCAAGCAACCCAAGTGGATGAAAGTGTTTAACCTTCC ATGTTTCGTTCAAAGAAGCATTCTCAAAGTCATAATCACCATAATAATGATTCTACACAAGAAGACGGGAAGATCAATGAACTTAGGGCTGCTCTTGGGCCTCTGTCTAGTCGAAGTTCAAAGTATTGCACCGATGCATGTCTGAGGAGATATTTGATAGCTCGAAACTGGAATGTTGAGAAGGCAAGGAAAATGCTAGAAGAGACGCTCAAGTGGAGGGCAGCTTACAAGCCCGAAGAAATCCGTTGGCATGAAGTAGCATTTGAAGGCGAGACTGGAAAAGTGTCGAGAGCAGATTTTTGCGATCGACAGGGAAGATCTGTGCTCATAATGAGACCTGGAATGCAGAACACAACTCCATCAGAAGTCAGCGTGCGGCATCTAGTCTATCTTCTAGAGAATGCGATTCTGAACCTTGTTGAGGGTCAAGAACAAATGTGTTGGTTAATAGATTTCACCGGATTTACAATGAAAACCAATGTCTCCGTCAAAATAGCCTCCGATGTTATCAATATCTTGCAGAACCATTACCCGGAAAGACTTGCCGTTGCATTCCTCTACAATCCACCCAAGATTTTTCAAGCCTTCTGGAAGGCTATCAAGTACTTCTTAGATCCAAAGACATCTCAAAAGGTAAAGTTTGTAAATCCCAAAGACAAAGGAAGCGTGGAGCTGATGAAATCATACTTCGACATGGAAAACCTTCCCAGTGTGTTTGGGGGTAAAGCCACACTCGAGTATGATCACCAGCAGTTCTCTCAGATGATGGCCCAAGACGAGCTTAAAGCTGCACTAGTGTGGGGCCTTGATGAGAAGGCCCACCATATCACAAATGGGCCTTCTTCTGGCCCAGAAGTTGCACCAGAGCCCATTACTGCAACAAACTAA MFRSKKHSQSHNHHNNDSTQEDGKINELRAALGPLSSRSSKYCTDACLRRYLIARNWNVEKARKMLEETLKWRAAYKPEEIRWHEVAFEGETGKVSRADFCDRQGRSVLIMRPGMQNTTPSEVSVRHLVYLLENAILNLVEGQEQMCWLIDFTGFTMKTNVSVKIASDVINILQNHYPERLAVAFLYNPPKIFQAFWKAIKYFLDPKTSQKVKFVNPKDKGSVELMKSYFDMENLPSVFGGKATLEYDHQQFSQMMAQDELKAALVWGLDEKAHHITNGPSSGPEVAPEPITATN Homology
BLAST of CmoCh16G007170 vs. ExPASy Swiss-Prot
Match: Q9UU99 (CRAL-TRIO domain-containing protein C23B6.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPCC23B6.04c PE=1 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 3.5e-30 Identity = 83/229 (36.24%), Postives = 118/229 (51.53%), Query Frame = 0
BLAST of CmoCh16G007170 vs. ExPASy Swiss-Prot
Match: Q55CU8 (Phosphatidylinositol transfer protein 3 OS=Dictyostelium discoideum OX=44689 GN=pitC PE=2 SV=1) HSP 1 Score: 122.9 bits (307), Expect = 6.2e-27 Identity = 73/219 (33.33%), Postives = 118/219 (53.88%), Query Frame = 0
BLAST of CmoCh16G007170 vs. ExPASy Swiss-Prot
Match: P53860 (Phosphatidylinositol transfer protein PDR16 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=PDR16 PE=1 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 2.1e-22 Identity = 80/266 (30.08%), Postives = 120/266 (45.11%), Query Frame = 0
BLAST of CmoCh16G007170 vs. ExPASy Swiss-Prot
Match: P53844 (Phosphatidylinositol transfer protein PDR17 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=PDR17 PE=1 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 1.1e-20 Identity = 79/266 (29.70%), Postives = 121/266 (45.49%), Query Frame = 0
BLAST of CmoCh16G007170 vs. ExPASy Swiss-Prot
Match: P45816 (SEC14 cytosolic factor OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=SEC14 PE=3 SV=2) HSP 1 Score: 77.4 bits (189), Expect = 3.0e-13 Identity = 71/247 (28.74%), Postives = 109/247 (44.13%), Query Frame = 0
BLAST of CmoCh16G007170 vs. ExPASy TrEMBL
Match: A0A6J1ESC3 (phosphatidylinositol transfer protein 3-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111436058 PE=4 SV=1) HSP 1 Score: 600.9 bits (1548), Expect = 2.9e-168 Identity = 295/295 (100.00%), Postives = 295/295 (100.00%), Query Frame = 0
BLAST of CmoCh16G007170 vs. ExPASy TrEMBL
Match: A0A6J1J6E4 (phosphatidylinositol transfer protein 3-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482999 PE=4 SV=1) HSP 1 Score: 584.7 bits (1506), Expect = 2.1e-163 Identity = 288/295 (97.63%), Postives = 290/295 (98.31%), Query Frame = 0
BLAST of CmoCh16G007170 vs. ExPASy TrEMBL
Match: A0A5A7TRI3 (Random slug protein 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G005530 PE=4 SV=1) HSP 1 Score: 544.7 bits (1402), Expect = 2.4e-151 Identity = 268/296 (90.54%), Postives = 279/296 (94.26%), Query Frame = 0
BLAST of CmoCh16G007170 vs. ExPASy TrEMBL
Match: A0A1S3BX30 (random slug protein 5 OS=Cucumis melo OX=3656 GN=LOC103494385 PE=4 SV=1) HSP 1 Score: 544.7 bits (1402), Expect = 2.4e-151 Identity = 268/296 (90.54%), Postives = 279/296 (94.26%), Query Frame = 0
BLAST of CmoCh16G007170 vs. ExPASy TrEMBL
Match: A0A0A0KWJ1 (CRAL-TRIO domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G038670 PE=4 SV=1) HSP 1 Score: 534.3 bits (1375), Expect = 3.3e-148 Identity = 263/295 (89.15%), Postives = 273/295 (92.54%), Query Frame = 0
BLAST of CmoCh16G007170 vs. NCBI nr
Match: XP_022929512.1 (phosphatidylinositol transfer protein 3-like isoform X1 [Cucurbita moschata] >XP_022929513.1 phosphatidylinositol transfer protein 3-like isoform X1 [Cucurbita moschata] >XP_022929514.1 phosphatidylinositol transfer protein 3-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 600.9 bits (1548), Expect = 5.9e-168 Identity = 295/295 (100.00%), Postives = 295/295 (100.00%), Query Frame = 0
BLAST of CmoCh16G007170 vs. NCBI nr
Match: KAG6577254.1 (hypothetical protein SDJN03_24828, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 597.8 bits (1540), Expect = 5.0e-167 Identity = 293/295 (99.32%), Postives = 294/295 (99.66%), Query Frame = 0
BLAST of CmoCh16G007170 vs. NCBI nr
Match: XP_023553217.1 (phosphatidylinositol transfer protein 3-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023553218.1 phosphatidylinositol transfer protein 3-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023553219.1 phosphatidylinositol transfer protein 3-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023553220.1 phosphatidylinositol transfer protein 3-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023553221.1 phosphatidylinositol transfer protein 3-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 591.7 bits (1524), Expect = 3.6e-165 Identity = 291/295 (98.64%), Postives = 293/295 (99.32%), Query Frame = 0
BLAST of CmoCh16G007170 vs. NCBI nr
Match: XP_022984840.1 (phosphatidylinositol transfer protein 3-like isoform X1 [Cucurbita maxima] >XP_022984841.1 phosphatidylinositol transfer protein 3-like isoform X1 [Cucurbita maxima] >XP_022984842.1 phosphatidylinositol transfer protein 3-like isoform X1 [Cucurbita maxima] >XP_022984843.1 phosphatidylinositol transfer protein 3-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 584.7 bits (1506), Expect = 4.4e-163 Identity = 288/295 (97.63%), Postives = 290/295 (98.31%), Query Frame = 0
BLAST of CmoCh16G007170 vs. NCBI nr
Match: KAA0044746.1 (random slug protein 5 [Cucumis melo var. makuwa] >TYK16716.1 random slug protein 5 [Cucumis melo var. makuwa]) HSP 1 Score: 544.7 bits (1402), Expect = 5.0e-151 Identity = 268/296 (90.54%), Postives = 279/296 (94.26%), Query Frame = 0
BLAST of CmoCh16G007170 vs. TAIR 10
Match: AT4G36640.1 (Sec14p-like phosphatidylinositol transfer family protein ) HSP 1 Score: 367.9 bits (943), Expect = 7.9e-102 Identity = 178/290 (61.38%), Postives = 229/290 (78.97%), Query Frame = 0
BLAST of CmoCh16G007170 vs. TAIR 10
Match: AT1G75170.1 (Sec14p-like phosphatidylinositol transfer family protein ) HSP 1 Score: 363.6 bits (932), Expect = 1.5e-100 Identity = 181/294 (61.56%), Postives = 228/294 (77.55%), Query Frame = 0
BLAST of CmoCh16G007170 vs. TAIR 10
Match: AT1G75170.2 (Sec14p-like phosphatidylinositol transfer family protein ) HSP 1 Score: 363.6 bits (932), Expect = 1.5e-100 Identity = 181/294 (61.56%), Postives = 228/294 (77.55%), Query Frame = 0
BLAST of CmoCh16G007170 vs. TAIR 10
Match: AT4G36640.2 (Sec14p-like phosphatidylinositol transfer family protein ) HSP 1 Score: 306.6 bits (784), Expect = 2.2e-83 Identity = 145/226 (64.16%), Postives = 183/226 (80.97%), Query Frame = 0
BLAST of CmoCh16G007170 vs. TAIR 10
Match: AT1G22180.2 (Sec14p-like phosphatidylinositol transfer family protein ) HSP 1 Score: 273.1 bits (697), Expect = 2.6e-73 Identity = 141/281 (50.18%), Postives = 195/281 (69.40%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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