CmoCh16G006900 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh16G006900
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Pentatricopeptide repeat-containing protein
Location	Cmo_Chr16: 3412918 .. 3414870 (-)
RNA-Seq Expression	CmoCh16G006900
Synteny	CmoCh16G006900

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTGGTCTCTCCCGCAACTTCTCCACAGTCTGCAAGCTTAGTCATTTACAGCCCAGCCAGACACAGGCGACGTCAAATTTCATACCCTTTTCTCAGCTTCAACAGCAGCGGAAGCTCTTAGAATGGCGACTCATAAGTATTCTCCACGACTGCACGGACTTTTCTCAAATCAAGCAAGTTCATGGCCAAATCATTTGCAATGGCTTGAGTCAATGCTCTTACGTCCTCACCAAACTCATTCGCACGCTTTCGAAGGTAGATGTCCCAATGGATTGCTACCCACGTTTGGTTTTTGGACAGGTTAATTACCCCAACCCCTTTCTTTGGACTGCCATGATTCGTGGGTATGCCCTTCAAGGACCCTTCACTGAGTCTATTAACTTGTATACTAACATGAGGAGGAATGGCGTCAGTCCTGTTTCGTTTACGTTTTCTGCGCTTTTTAAGGCTTGTGGGGCTTCTCTTAATTTGGATTTAGGTAGGCAGGTGCATGCTCAGACGATTTTGATTGGGGGTTTCGCTTCTGATTTATATGTTGGTAATACGATGATTGATATGTATGTGAAATGTGGGGTTTTGGGTTGTGGGCGGAAGGTGTTCGATGAAATGTCTGAGAGAGATGTGGTTTCATGGACTGAGCTGATTGTTGCGTATGCGAAGTTTGGGGATATGGAATCTGCTAGGGGGCTGTTTGATGAATTGCCTTTGAAGGATATGGTGGCATGGACTGCAATGGTCACTGGTTATGCCCAAAATGCTAGACCAAAGGAGGCATTGGAGTATTTTCAGAAGATGCAGGATGTCGGTATCGAGACCGATGAAGTTACACTTGTTGGTGTCATCTCAGCCTGTGCACAATTGGGTGCAGTTAAATATGCTAACTGGATTAGAGACATTGCTGAAAGATCAGGCTTTGGACCTTATGAAAATGTAATGGTGGGATCTGCTCTTATCGATATGTATTCTAAATGTGGCAGTCCTGATGAGGCATACAAGGTTTTTGAAGGAATGAAGGAAAGAAATGTGTTCTCGTATAGTTCAATGATTGTGGGATACGCTATGCATGGTCGCGCTCATTCCGCTTTGCAGTTGTTCCATGAGATGTTAAAAACTGAGATCAGGCCAAATAAGGTTACTTTCATTGGGGTGCTTTCAGCATGTAGCCATGCCGGTATGGTCGAACAAGGTCGGCAGCTATTTGCTAAGATGGAAAAGTATTTTAACGTAACGCCTTCACCCGATCATTATGCGTGTATGGTTGATCTCCTTGGTCGAGGTGGATGTTTGGAAGAAGCTCTTGAACTCATTGAAACCATGACAATGGAACCCCATGGAGGTGTATGGGGAGCACTGCTTGGAGCTTGCCGCATCCATGGGAATCCCGACATTGCTCGGGTAGCTGCCGATCAATTATTCAAGCTAGAACCAGATGGTATAGGGAACTACATTCTGCTATCAAACATATATGCATCAGCAGGAAGATGGGAAGAGGTGTCGAAATTGCGTAAAGTGATTCGAGCCAAAGGCTTAAAGAAGAATCCTGGCTGCAGCTGGTTTGAAGGAAAGAAAGGGGACATTCATGAATTCTTTGCGGATGATGCAACCCATCAACGATCAAGTGAGATTAGACAAGCCTTGAGGCAACTCCTTGAGAGATTAAGAGCCCATGGATACAAGCCAAACTTGAGCTCTGTGCCTTATGACTTGACCGATGATGAAAAGGAACGAATACTGATGAGTCATAGTGAGAAGCTGGCATTGGCATACGGGCTGTTATGTACTGAGGCAGGGGAAACCATTACGATCATGAAAAACCTTAGGATATGCGAGGATTGCCACAATGTCATGTGTGCTGCATCTGAAATCACTGGAAGGGAGATCATTATAAGGGATAACATGAGATTTCATCACTTCCACAATGGGACTTGTTCTTGTGGTAACTTTTGGTGA

mRNA sequence

ATGGTTGGTCTCTCCCGCAACTTCTCCACAGTCTGCAAGCTTAGTCATTTACAGCCCAGCCAGACACAGGCGACGTCAAATTTCATACCCTTTTCTCAGCTTCAACAGCAGCGGAAGCTCTTAGAATGGCGACTCATAAGTATTCTCCACGACTGCACGGACTTTTCTCAAATCAAGCAAGTTCATGGCCAAATCATTTGCAATGGCTTGAGTCAATGCTCTTACGTCCTCACCAAACTCATTCGCACGCTTTCGAAGGTAGATGTCCCAATGGATTGCTACCCACGTTTGGTTTTTGGACAGGTTAATTACCCCAACCCCTTTCTTTGGACTGCCATGATTCGTGGGTATGCCCTTCAAGGACCCTTCACTGAGTCTATTAACTTGTATACTAACATGAGGAGGAATGGCGTCAGTCCTGTTTCGTTTACGTTTTCTGCGCTTTTTAAGGCTTGTGGGGCTTCTCTTAATTTGGATTTAGGTAGGCAGGTGCATGCTCAGACGATTTTGATTGGGGGTTTCGCTTCTGATTTATATGTTGGTAATACGATGATTGATATGTATGTGAAATGTGGGGTTTTGGGTTGTGGGCGGAAGGTGTTCGATGAAATGTCTGAGAGAGATGTGGTTTCATGGACTGAGCTGATTGTTGCGTATGCGAAGTTTGGGGATATGGAATCTGCTAGGGGGCTGTTTGATGAATTGCCTTTGAAGGATATGGTGGCATGGACTGCAATGGTCACTGGTTATGCCCAAAATGCTAGACCAAAGGAGGCATTGGAGTATTTTCAGAAGATGCAGGATGTCGGTATCGAGACCGATGAAGTTACACTTGTTGGTGTCATCTCAGCCTGTGCACAATTGGGTGCAGTTAAATATGCTAACTGGATTAGAGACATTGCTGAAAGATCAGGCTTTGGACCTTATGAAAATGTAATGGTGGGATCTGCTCTTATCGATATGTATTCTAAATGTGGCAGTCCTGATGAGGCATACAAGGTTTTTGAAGGAATGAAGGAAAGAAATGTGTTCTCGTATAGTTCAATGATTGTGGGATACGCTATGCATGGTCGCGCTCATTCCGCTTTGCAGTTGTTCCATGAGATGTTAAAAACTGAGATCAGGCCAAATAAGGTTACTTTCATTGGGGTGCTTTCAGCATGTAGCCATGCCGGTATGGTCGAACAAGGTCGGCAGCTATTTGCTAAGATGGAAAAGTATTTTAACGTAACGCCTTCACCCGATCATTATGCGTGTATGGTTGATCTCCTTGGTCGAGGTGGATGTTTGGAAGAAGCTCTTGAACTCATTGAAACCATGACAATGGAACCCCATGGAGGTGTATGGGGAGCACTGCTTGGAGCTTGCCGCATCCATGGGAATCCCGACATTGCTCGGGTAGCTGCCGATCAATTATTCAAGCTAGAACCAGATGGTATAGGGAACTACATTCTGCTATCAAACATATATGCATCAGCAGGAAGATGGGAAGAGGTGTCGAAATTGCGTAAAGTGATTCGAGCCAAAGGCTTAAAGAAGAATCCTGGCTGCAGCTGGTTTGAAGGAAAGAAAGGGGACATTCATGAATTCTTTGCGGATGATGCAACCCATCAACGATCAAGTGAGATTAGACAAGCCTTGAGGCAACTCCTTGAGAGATTAAGAGCCCATGGATACAAGCCAAACTTGAGCTCTGTGCCTTATGACTTGACCGATGATGAAAAGGAACGAATACTGATGAGTCATAGTGAGAAGCTGGCATTGGCATACGGGCTGTTATGTACTGAGGCAGGGGAAACCATTACGATCATGAAAAACCTTAGGATATGCGAGGATTGCCACAATGTCATGTGTGCTGCATCTGAAATCACTGGAAGGGAGATCATTATAAGGGATAACATGAGATTTCATCACTTCCACAATGGGACTTGTTCTTGTGGTAACTTTTGGTGA

Coding sequence (CDS)

ATGGTTGGTCTCTCCCGCAACTTCTCCACAGTCTGCAAGCTTAGTCATTTACAGCCCAGCCAGACACAGGCGACGTCAAATTTCATACCCTTTTCTCAGCTTCAACAGCAGCGGAAGCTCTTAGAATGGCGACTCATAAGTATTCTCCACGACTGCACGGACTTTTCTCAAATCAAGCAAGTTCATGGCCAAATCATTTGCAATGGCTTGAGTCAATGCTCTTACGTCCTCACCAAACTCATTCGCACGCTTTCGAAGGTAGATGTCCCAATGGATTGCTACCCACGTTTGGTTTTTGGACAGGTTAATTACCCCAACCCCTTTCTTTGGACTGCCATGATTCGTGGGTATGCCCTTCAAGGACCCTTCACTGAGTCTATTAACTTGTATACTAACATGAGGAGGAATGGCGTCAGTCCTGTTTCGTTTACGTTTTCTGCGCTTTTTAAGGCTTGTGGGGCTTCTCTTAATTTGGATTTAGGTAGGCAGGTGCATGCTCAGACGATTTTGATTGGGGGTTTCGCTTCTGATTTATATGTTGGTAATACGATGATTGATATGTATGTGAAATGTGGGGTTTTGGGTTGTGGGCGGAAGGTGTTCGATGAAATGTCTGAGAGAGATGTGGTTTCATGGACTGAGCTGATTGTTGCGTATGCGAAGTTTGGGGATATGGAATCTGCTAGGGGGCTGTTTGATGAATTGCCTTTGAAGGATATGGTGGCATGGACTGCAATGGTCACTGGTTATGCCCAAAATGCTAGACCAAAGGAGGCATTGGAGTATTTTCAGAAGATGCAGGATGTCGGTATCGAGACCGATGAAGTTACACTTGTTGGTGTCATCTCAGCCTGTGCACAATTGGGTGCAGTTAAATATGCTAACTGGATTAGAGACATTGCTGAAAGATCAGGCTTTGGACCTTATGAAAATGTAATGGTGGGATCTGCTCTTATCGATATGTATTCTAAATGTGGCAGTCCTGATGAGGCATACAAGGTTTTTGAAGGAATGAAGGAAAGAAATGTGTTCTCGTATAGTTCAATGATTGTGGGATACGCTATGCATGGTCGCGCTCATTCCGCTTTGCAGTTGTTCCATGAGATGTTAAAAACTGAGATCAGGCCAAATAAGGTTACTTTCATTGGGGTGCTTTCAGCATGTAGCCATGCCGGTATGGTCGAACAAGGTCGGCAGCTATTTGCTAAGATGGAAAAGTATTTTAACGTAACGCCTTCACCCGATCATTATGCGTGTATGGTTGATCTCCTTGGTCGAGGTGGATGTTTGGAAGAAGCTCTTGAACTCATTGAAACCATGACAATGGAACCCCATGGAGGTGTATGGGGAGCACTGCTTGGAGCTTGCCGCATCCATGGGAATCCCGACATTGCTCGGGTAGCTGCCGATCAATTATTCAAGCTAGAACCAGATGGTATAGGGAACTACATTCTGCTATCAAACATATATGCATCAGCAGGAAGATGGGAAGAGGTGTCGAAATTGCGTAAAGTGATTCGAGCCAAAGGCTTAAAGAAGAATCCTGGCTGCAGCTGGTTTGAAGGAAAGAAAGGGGACATTCATGAATTCTTTGCGGATGATGCAACCCATCAACGATCAAGTGAGATTAGACAAGCCTTGAGGCAACTCCTTGAGAGATTAAGAGCCCATGGATACAAGCCAAACTTGAGCTCTGTGCCTTATGACTTGACCGATGATGAAAAGGAACGAATACTGATGAGTCATAGTGAGAAGCTGGCATTGGCATACGGGCTGTTATGTACTGAGGCAGGGGAAACCATTACGATCATGAAAAACCTTAGGATATGCGAGGATTGCCACAATGTCATGTGTGCTGCATCTGAAATCACTGGAAGGGAGATCATTATAAGGGATAACATGAGATTTCATCACTTCCACAATGGGACTTGTTCTTGTGGTAACTTTTGGTGA

Protein sequence

MVGLSRNFSTVCKLSHLQPSQTQATSNFIPFSQLQQQRKLLEWRLISILHDCTDFSQIKQVHGQIICNGLSQCSYVLTKLIRTLSKVDVPMDCYPRLVFGQVNYPNPFLWTAMIRGYALQGPFTESINLYTNMRRNGVSPVSFTFSALFKACGASLNLDLGRQVHAQTILIGGFASDLYVGNTMIDMYVKCGVLGCGRKVFDEMSERDVVSWTELIVAYAKFGDMESARGLFDELPLKDMVAWTAMVTGYAQNARPKEALEYFQKMQDVGIETDEVTLVGVISACAQLGAVKYANWIRDIAERSGFGPYENVMVGSALIDMYSKCGSPDEAYKVFEGMKERNVFSYSSMIVGYAMHGRAHSALQLFHEMLKTEIRPNKVTFIGVLSACSHAGMVEQGRQLFAKMEKYFNVTPSPDHYACMVDLLGRGGCLEEALELIETMTMEPHGGVWGALLGACRIHGNPDIARVAADQLFKLEPDGIGNYILLSNIYASAGRWEEVSKLRKVIRAKGLKKNPGCSWFEGKKGDIHEFFADDATHQRSSEIRQALRQLLERLRAHGYKPNLSSVPYDLTDDEKERILMSHSEKLALAYGLLCTEAGETITIMKNLRICEDCHNVMCAASEITGREIIIRDNMRFHHFHNGTCSCGNFW

Homology

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BLAST of CmoCh16G006900 vs. ExPASy Swiss-Prot
Match: Q9FFG8 (Pentatricopeptide repeat-containing protein At5g44230 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H17 PE=2 SV=1)

HSP 1 Score: 808.1 bits (2086), Expect = 7.1e-233
Identity = 386/629 (61.37%), Postives = 483/629 (76.79%), Query Frame = 0


Query: 23  QATSNFIPFSQLQQQRKLLEWRLISILHDCTDFSQIKQVHGQIICNGLSQCSYVLTKLIR 82
           + ++N   FS++  Q++LL   LIS L DC + +QIKQ+HG ++  GL Q  Y+LTKLIR
Sbjct: 30  RTSNNSGTFSEISNQKELLVSSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIR 89

Query: 83  TLSKVDVPMDCYPRLVFGQVNYPNPFLWTAMIRGYALQGPFTESINLYTNMRRNGVSPVS 142
           TL+K+ VPMD Y R V   V + NPFLWTA+IRGYA++G F E+I +Y  MR+  ++PVS
Sbjct: 90  TLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVS 149

Query: 143 FTFSALFKACGASLNLDLGRQVHAQTILIGGFASDLYVGNTMIDMYVKCGVLGCGRKVFD 202
           FTFSAL KACG   +L+LGRQ HAQT  + GF   +YVGNTMIDMYVKC  + C RKVFD
Sbjct: 150 FTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCF-VYVGNTMIDMYVKCESIDCARKVFD 209

Query: 203 EMSERDVVSWTELIVAYAKFGDMESARGLFDELPLKDMVAWTAMVTGYAQNARPKEALEY 262
           EM ERDV+SWTELI AYA+ G+ME A  LF+ LP KDMVAWTAMVTG+AQNA+P+EALEY
Sbjct: 210 EMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEY 269

Query: 263 FQKMQDVGIETDEVTLVGVISACAQLGAVKYANWIRDIAERSGFGPYENVMVGSALIDMY 322
           F +M+  GI  DEVT+ G ISACAQLGA KYA+    IA++SG+ P ++V++GSALIDMY
Sbjct: 270 FDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMY 329

Query: 323 SKCGSPDEAYKVFEGMKERNVFSYSSMIVGYAMHGRAHSALQLFHEML-KTEIRPNKVTF 382
           SKCG+ +EA  VF  M  +NVF+YSSMI+G A HGRA  AL LFH M+ +TEI+PN VTF
Sbjct: 330 SKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTF 389

Query: 383 IGVLSACSHAGMVEQGRQLFAKMEKYFNVTPSPDHYACMVDLLGRGGCLEEALELIETMT 442
           +G L ACSH+G+V+QGRQ+F  M + F V P+ DHY CMVDLLGR G L+EALELI+TM+
Sbjct: 390 VGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMS 449

Query: 443 MEPHGGVWGALLGACRIHGNPDIARVAADQLFKLEPDGIGNYILLSNIYASAGRWEEVSK 502
           +EPHGGVWGALLGACRIH NP+IA +AA+ LF+LEPD IGNYILLSN+YASAG W  V +
Sbjct: 450 VEPHGGVWGALLGACRIHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLR 509

Query: 503 LRKVIRAKGLKKNPGCSWFEGKKGDIHEFFADDATHQRSSEIRQALRQLLERLRAHGYKP 562
           +RK+I+ KGLKK P  SW   K G +H+FF  +  H  S++I+  L +L+ERL   GY+P
Sbjct: 510 VRKLIKEKGLKKTPAVSWVVDKNGQMHKFFPGNLNHPMSNKIQDKLEELVERLTVLGYQP 569

Query: 563 NLSSVPYDLTDDEKERILMSHSEKLALAYGLLCTEAGETITIMKNLRICEDCHNVMCAAS 622
           +LSSVPYD++D+ K  IL+ H+EKLALA+ LL T    TITIMKNLR+C DCH  M  AS
Sbjct: 570 DLSSVPYDVSDNAKRLILIQHTEKLALAFSLLTTNRDSTITIMKNLRMCLDCHKFMRLAS 629

Query: 623 EITGREIIIRDNMRFHHFHNGTCSCGNFW 651
           E+TG+ II+RDNMRFHHF +G CSCG+FW
Sbjct: 630 EVTGKVIIMRDNMRFHHFRSGDCSCGDFW 657

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BLAST of CmoCh16G006900 vs. ExPASy Swiss-Prot
Match: O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)

HSP 1 Score: 500.0 bits (1286), Expect = 4.1e-140
Identity = 250/609 (41.05%), Postives = 371/609 (60.92%), Query Frame = 0


Query: 45  LISILHDCTDFSQIKQVHGQIICNGLSQCSYVLTKLIRT-LSKVDVPMDCYPRLVFGQVN 104
           LI    + +  S  + +HG  + + +    +V   LI    S  D+   C    VF  + 
Sbjct: 137 LIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSAC---KVFTTIK 196

Query: 105 YPNPFLWTAMIRGYALQGPFTESINLYTNMRRNGVSPVSFTFSALFKACGASLNLDLGRQ 164
             +   W +MI G+  +G   +++ L+  M    V     T   +  AC    NL+ GRQ
Sbjct: 197 EKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQ 256

Query: 165 VHAQTILIGGFASDLYVGNTMIDMYVKCGVLGCGRKVFDEMSERDVVSWTELIVAYAKFG 224
           V    I       +L + N M+DMY KCG +   +++FD M E+D V+WT ++  YA   
Sbjct: 257 V-CSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISE 316

Query: 225 DMESARGLFDELPLKDMVAWTAMVTGYAQNARPKEALEYFQKMQ-DVGIETDEVTLVGVI 284
           D E+AR + + +P KD+VAW A+++ Y QN +P EAL  F ++Q    ++ +++TLV  +
Sbjct: 317 DYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTL 376

Query: 285 SACAQLGAVKYANWIRDIAERSGFGPYENVMVGSALIDMYSKCGSPDEAYKVFEGMKERN 344
           SACAQ+GA++   WI    ++ G     N  V SALI MYSKCG  +++ +VF  +++R+
Sbjct: 377 SACAQVGALELGRWIHSYIKKHGI--RMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRD 436

Query: 345 VFSYSSMIVGYAMHGRAHSALQLFHEMLKTEIRPNKVTFIGVLSACSHAGMVEQGRQLFA 404
           VF +S+MI G AMHG  + A+ +F++M +  ++PN VTF  V  ACSH G+V++   LF 
Sbjct: 437 VFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFH 496

Query: 405 KMEKYFNVTPSPDHYACMVDLLGRGGCLEEALELIETMTMEPHGGVWGALLGACRIHGNP 464
           +ME  + + P   HYAC+VD+LGR G LE+A++ IE M + P   VWGALLGAC+IH N 
Sbjct: 497 QMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANL 556

Query: 465 DIARVAADQLFKLEPDGIGNYILLSNIYASAGRWEEVSKLRKVIRAKGLKKNPGCSWFEG 524
           ++A +A  +L +LEP   G ++LLSNIYA  G+WE VS+LRK +R  GLKK PGCS  E 
Sbjct: 557 NLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIE- 616

Query: 525 KKGDIHEFFADDATHQRSSEIRQALRQLLERLRAHGYKPNLSSVPYDLTDDE-KERILMS 584
             G IHEF + D  H  S ++   L +++E+L+++GY+P +S V   + ++E KE+ L  
Sbjct: 617 IDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNL 676

Query: 585 HSEKLALAYGLLCTEAGETITIMKNLRICEDCHNVMCAASEITGREIIIRDNMRFHHFHN 644
           HSEKLA+ YGL+ TEA + I ++KNLR+C DCH+V    S++  REII+RD  RFHHF N
Sbjct: 677 HSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRN 736

Query: 645 GTCSCGNFW 651
           G CSC +FW
Sbjct: 737 GQCSCNDFW 738

[Close]

BLAST of CmoCh16G006900 vs. ExPASy Swiss-Prot
Match: Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 493.4 bits (1269), Expect = 3.9e-138
Identity = 266/726 (36.64%), Postives = 388/726 (53.44%), Query Frame = 0


Query: 27  NFIPFSQLQQQRKLLEWRLISILHDCTDFSQIKQVHGQIICNGLSQCSYVLTKLIR-TLS 86
           +F+P S       +     +S+LH+C     ++ +H Q+I  GL   +Y L+KLI   + 
Sbjct: 18  HFLPSSSDPPYDSIRNHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCIL 77

Query: 87  KVDVPMDCYPRLVFGQVNYPNPFLWTAMIRGYALQGPFTESINLYTNMRRNGVSPVSFTF 146
                   Y   VF  +  PN  +W  M RG+AL      ++ LY  M   G+ P S+TF
Sbjct: 78  SPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTF 137

Query: 147 SALFKACGASLNLDLGRQVHAQTILIGGFASDLYVGNTMIDMYVKCGVLGCGRKVFDEMS 206
             + K+C  S     G+Q+H   + + G   DLYV  ++I MYV+ G L    KVFD+  
Sbjct: 138 PFVLKSCAKSKAFKEGQQIHGHVLKL-GCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSP 197

Query: 207 ERDVVSWTELIVAYAKFGDMESARGLFDELPLKDMVAWTAMVTGYAQNARPKEALEYFQK 266
            RDVVS+T LI  YA  G +E+A+ LFDE+P+KD+V+W AM++GYA+    KEALE F+ 
Sbjct: 198 HRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKD 257

Query: 267 MQDVGIETDEVTLVGVISACAQLGAVKYANWIRDIAERSGFG------------------ 326
           M    +  DE T+V V+SACAQ G+++    +    +  GFG                  
Sbjct: 258 MMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGE 317

Query: 327 -----------PYE-----NVMVG------------------------------------ 386
                      PY+     N ++G                                    
Sbjct: 318 LETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPA 377

Query: 387 -------------------------------SALIDMYSKCGSPDEAYKVFEGMKERNVF 446
                                          ++LIDMY+KCG  + A++VF  +  +++ 
Sbjct: 378 CAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLS 437

Query: 447 SYSSMIVGYAMHGRAHSALQLFHEMLKTEIRPNKVTFIGVLSACSHAGMVEQGRQLFAKM 506
           S+++MI G+AMHGRA ++  LF  M K  I+P+ +TF+G+LSACSH+GM++ GR +F  M
Sbjct: 438 SWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTM 497

Query: 507 EKYFNVTPSPDHYACMVDLLGRGGCLEEALELIETMTMEPHGGVWGALLGACRIHGNPDI 566
            + + +TP  +HY CM+DLLG  G  +EA E+I  M MEP G +W +LL AC++HGN ++
Sbjct: 498 TQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVEL 557

Query: 567 ARVAADQLFKLEPDGIGNYILLSNIYASAGRWEEVSKLRKVIRAKGLKKNPGCSWFEGKK 626
               A+ L K+EP+  G+Y+LLSNIYASAGRW EV+K R ++  KG+KK PGCS  E   
Sbjct: 558 GESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIE-ID 617

Query: 627 GDIHEFFADDATHQRSSEIRQALRQLLERLRAHGYKPNLSSVPYDLTDDEKERILMSHSE 651
             +HEF   D  H R+ EI   L ++   L   G+ P+ S V  ++ ++ KE  L  HSE
Sbjct: 618 SVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSE 677

[Close]

BLAST of CmoCh16G006900 vs. ExPASy Swiss-Prot
Match: Q9FG16 (Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H88 PE=3 SV=1)

HSP 1 Score: 491.9 bits (1265), Expect = 1.1e-137
Identity = 238/611 (38.95%), Postives = 378/611 (61.87%), Query Frame = 0


Query: 46  ISILHDCTDFSQIKQVHGQIICNGLSQCSYVLTKLIRTL---SKVDVPMDC--YPRLVFG 105
           +++L  C+ FS +K +HG ++   L    +V ++L+      S  + P +   Y   +F 
Sbjct: 16  LALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFS 75

Query: 106 QVNYPNPFLWTAMIRGYALQGPFTESINLYTNMRRNGVSPVSFTFSALFKACGASLNLDL 165
           Q+  PN F++  +IR ++     +++   YT M ++ + P + TF  L KA      + +
Sbjct: 76  QIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLV 135

Query: 166 GRQVHAQTILIGGFASDLYVGNTMIDMYVKCGVLGCGRKVFDEMSERDVVSWTELIVAYA 225
           G Q H+Q +   GF +D+YV N+++ MY  CG +    ++F +M  RDVVSWT ++  Y 
Sbjct: 136 GEQTHSQIVRF-GFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYC 195

Query: 226 KFGDMESARGLFDELPLKDMVAWTAMVTGYAQNARPKEALEYFQKMQDVGIETDEVTLVG 285
           K G +E+AR +FDE+P +++  W+ M+ GYA+N   ++A++ F+ M+  G+  +E  +V 
Sbjct: 196 KCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVS 255

Query: 286 VISACAQLGAVKYANWIRDIAERSGFGPYENVMVGSALIDMYSKCGSPDEAYKVFEGMKE 345
           VIS+CA LGA+++     +   +S      N+++G+AL+DM+ +CG  ++A  VFEG+ E
Sbjct: 256 VISSCAHLGALEFGERAYEYVVKSHM--TVNLILGTALVDMFWRCGDIEKAIHVFEGLPE 315

Query: 346 RNVFSYSSMIVGYAMHGRAHSALQLFHEMLKTEIRPNKVTFIGVLSACSHAGMVEQGRQL 405
            +  S+SS+I G A+HG AH A+  F +M+     P  VTF  VLSACSH G+VE+G ++
Sbjct: 316 TDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEI 375

Query: 406 FAKMEKYFNVTPSPDHYACMVDLLGRGGCLEEALELIETMTMEPHGGVWGALLGACRIHG 465
           +  M+K   + P  +HY C+VD+LGR G L EA   I  M ++P+  + GALLGAC+I+ 
Sbjct: 376 YENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYK 435

Query: 466 NPDIARVAADQLFKLEPDGIGNYILLSNIYASAGRWEEVSKLRKVIRAKGLKKNPGCSWF 525
           N ++A    + L K++P+  G Y+LLSNIYA AG+W+++  LR +++ K +KK PG S  
Sbjct: 436 NTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLI 495

Query: 526 EGKKGDIHEF-FADDATHQRSSEIRQALRQLLERLRAHGYKPNLSSVPYDLTDDEKERIL 585
           E   G I++F   DD  H    +IR+   ++L ++R  GYK N     +D+ ++EKE  +
Sbjct: 496 E-IDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDVDEEEKESSI 555

Query: 586 MSHSEKLALAYGLLCTEAGETITIMKNLRICEDCHNVMCAASEITGREIIIRDNMRFHHF 645
             HSEKLA+AYG++ T+ G TI I+KNLR+CEDCH V    SE+ GRE+I+RD  RFHHF
Sbjct: 556 HMHSEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRDRNRFHHF 615

Query: 646 HNGTCSCGNFW 651
            NG CSC ++W
Sbjct: 616 RNGVCSCRDYW 622

[Close]

BLAST of CmoCh16G006900 vs. ExPASy Swiss-Prot
Match: Q9FJY7 (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H61 PE=2 SV=1)

HSP 1 Score: 488.0 bits (1255), Expect = 1.6e-136
Identity = 237/610 (38.85%), Postives = 368/610 (60.33%), Query Frame = 0


Query: 43  WRLISILHDCTDFSQIKQVHGQIICNGLSQCSYVLTKLIR-TLSKVDVPMDCYPRLVFGQ 102
           +  +S L  C+   ++KQ+H +++  GL Q SY +TK +   +S        Y ++VF  
Sbjct: 15  YETMSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDG 74

Query: 103 VNYPNPFLWTAMIRGYALQGPFTESINLYTNMRRNGVSPVSFTFSALFKACGASLNLDLG 162
            + P+ FLW  MIRG++       S+ LY  M  +     ++TF +L KAC      +  
Sbjct: 75  FDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEET 134

Query: 163 RQVHAQTILIGGFASDLYVGNTMIDMYVKCGVLGCGRKVFDEMSERDVVSWTELIVAYAK 222
            Q+HAQ   + G+ +D+Y  N++I+ Y   G       +FD + E D VSW  +I  Y K
Sbjct: 135 TQIHAQITKL-GYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVK 194

Query: 223 FGDMESARGLFDELPLKDMVAWTAMVTGYAQNARPKEALEYFQKMQDVGIETDEVTLVGV 282
            G M+ A  LF ++  K+ ++WT M++GY Q    KEAL+ F +MQ+  +E D V+L   
Sbjct: 195 AGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANA 254

Query: 283 ISACAQLGAVKYANWIRDIAERSGFGPYENVMVGSALIDMYSKCGSPDEAYKVFEGMKER 342
           +SACAQLGA++   WI     ++      + ++G  LIDMY+KCG  +EA +VF+ +K++
Sbjct: 255 LSACAQLGALEQGKWIHSYLNKTRI--RMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKK 314

Query: 343 NVFSYSSMIVGYAMHGRAHSALQLFHEMLKTEIRPNKVTFIGVLSACSHAGMVEQGRQLF 402
           +V +++++I GYA HG    A+  F EM K  I+PN +TF  VL+ACS+ G+VE+G+ +F
Sbjct: 315 SVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIF 374

Query: 403 AKMEKYFNVTPSPDHYACMVDLLGRGGCLEEALELIETMTMEPHGGVWGALLGACRIHGN 462
             ME+ +N+ P+ +HY C+VDLLGR G L+EA   I+ M ++P+  +WGALL ACRIH N
Sbjct: 375 YSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKN 434

Query: 463 PDIARVAADQLFKLEPDGIGNYILLSNIYASAGRWEEVSKLRKVIRAKGLKKNPGCSWFE 522
            ++     + L  ++P   G Y+  +NI+A   +W++ ++ R++++ +G+ K PGCS   
Sbjct: 435 IELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTI- 494

Query: 523 GKKGDIHEFFADDATHQRSSEIRQALRQLLERLRAHGYKPNLSSVPYDLT-DDEKERILM 582
             +G  HEF A D +H    +I+   R +  +L  +GY P L  +  DL  DDE+E I+ 
Sbjct: 495 SLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVH 554

Query: 583 SHSEKLALAYGLLCTEAGETITIMKNLRICEDCHNVMCAASEITGREIIIRDNMRFHHFH 642
            HSEKLA+ YGL+ T+ G  I IMKNLR+C+DCH V    S+I  R+I++RD  RFHHF 
Sbjct: 555 QHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFR 614

Query: 643 NGTCSCGNFW 651
           +G CSCG++W
Sbjct: 615 DGKCSCGDYW 620

[Close]

BLAST of CmoCh16G006900 vs. ExPASy TrEMBL
Match: A0A6J1EP11 (pentatricopeptide repeat-containing protein At5g44230 OS=Cucurbita moschata OX=3662 GN=LOC111436073 PE=3 SV=1)

HSP 1 Score: 1345.5 bits (3481), Expect = 0.0e+00
Identity = 650/650 (100.00%), Postives = 650/650 (100.00%), Query Frame = 0


Query: 1   MVGLSRNFSTVCKLSHLQPSQTQATSNFIPFSQLQQQRKLLEWRLISILHDCTDFSQIKQ 60
           MVGLSRNFSTVCKLSHLQPSQTQATSNFIPFSQLQQQRKLLEWRLISILHDCTDFSQIKQ
Sbjct: 1   MVGLSRNFSTVCKLSHLQPSQTQATSNFIPFSQLQQQRKLLEWRLISILHDCTDFSQIKQ 60

Query: 61  VHGQIICNGLSQCSYVLTKLIRTLSKVDVPMDCYPRLVFGQVNYPNPFLWTAMIRGYALQ 120
           VHGQIICNGLSQCSYVLTKLIRTLSKVDVPMDCYPRLVFGQVNYPNPFLWTAMIRGYALQ
Sbjct: 61  VHGQIICNGLSQCSYVLTKLIRTLSKVDVPMDCYPRLVFGQVNYPNPFLWTAMIRGYALQ 120

Query: 121 GPFTESINLYTNMRRNGVSPVSFTFSALFKACGASLNLDLGRQVHAQTILIGGFASDLYV 180
           GPFTESINLYTNMRRNGVSPVSFTFSALFKACGASLNLDLGRQVHAQTILIGGFASDLYV
Sbjct: 121 GPFTESINLYTNMRRNGVSPVSFTFSALFKACGASLNLDLGRQVHAQTILIGGFASDLYV 180

Query: 181 GNTMIDMYVKCGVLGCGRKVFDEMSERDVVSWTELIVAYAKFGDMESARGLFDELPLKDM 240
           GNTMIDMYVKCGVLGCGRKVFDEMSERDVVSWTELIVAYAKFGDMESARGLFDELPLKDM
Sbjct: 181 GNTMIDMYVKCGVLGCGRKVFDEMSERDVVSWTELIVAYAKFGDMESARGLFDELPLKDM 240

Query: 241 VAWTAMVTGYAQNARPKEALEYFQKMQDVGIETDEVTLVGVISACAQLGAVKYANWIRDI 300
           VAWTAMVTGYAQNARPKEALEYFQKMQDVGIETDEVTLVGVISACAQLGAVKYANWIRDI
Sbjct: 241 VAWTAMVTGYAQNARPKEALEYFQKMQDVGIETDEVTLVGVISACAQLGAVKYANWIRDI 300

Query: 301 AERSGFGPYENVMVGSALIDMYSKCGSPDEAYKVFEGMKERNVFSYSSMIVGYAMHGRAH 360
           AERSGFGPYENVMVGSALIDMYSKCGSPDEAYKVFEGMKERNVFSYSSMIVGYAMHGRAH
Sbjct: 301 AERSGFGPYENVMVGSALIDMYSKCGSPDEAYKVFEGMKERNVFSYSSMIVGYAMHGRAH 360

Query: 361 SALQLFHEMLKTEIRPNKVTFIGVLSACSHAGMVEQGRQLFAKMEKYFNVTPSPDHYACM 420
           SALQLFHEMLKTEIRPNKVTFIGVLSACSHAGMVEQGRQLFAKMEKYFNVTPSPDHYACM
Sbjct: 361 SALQLFHEMLKTEIRPNKVTFIGVLSACSHAGMVEQGRQLFAKMEKYFNVTPSPDHYACM 420

Query: 421 VDLLGRGGCLEEALELIETMTMEPHGGVWGALLGACRIHGNPDIARVAADQLFKLEPDGI 480
           VDLLGRGGCLEEALELIETMTMEPHGGVWGALLGACRIHGNPDIARVAADQLFKLEPDGI
Sbjct: 421 VDLLGRGGCLEEALELIETMTMEPHGGVWGALLGACRIHGNPDIARVAADQLFKLEPDGI 480

Query: 481 GNYILLSNIYASAGRWEEVSKLRKVIRAKGLKKNPGCSWFEGKKGDIHEFFADDATHQRS 540
           GNYILLSNIYASAGRWEEVSKLRKVIRAKGLKKNPGCSWFEGKKGDIHEFFADDATHQRS
Sbjct: 481 GNYILLSNIYASAGRWEEVSKLRKVIRAKGLKKNPGCSWFEGKKGDIHEFFADDATHQRS 540

Query: 541 SEIRQALRQLLERLRAHGYKPNLSSVPYDLTDDEKERILMSHSEKLALAYGLLCTEAGET 600
           SEIRQALRQLLERLRAHGYKPNLSSVPYDLTDDEKERILMSHSEKLALAYGLLCTEAGET
Sbjct: 541 SEIRQALRQLLERLRAHGYKPNLSSVPYDLTDDEKERILMSHSEKLALAYGLLCTEAGET 600

Query: 601 ITIMKNLRICEDCHNVMCAASEITGREIIIRDNMRFHHFHNGTCSCGNFW 651
           ITIMKNLRICEDCHNVMCAASEITGREIIIRDNMRFHHFHNGTCSCGNFW
Sbjct: 601 ITIMKNLRICEDCHNVMCAASEITGREIIIRDNMRFHHFHNGTCSCGNFW 650

[Close]

BLAST of CmoCh16G006900 vs. ExPASy TrEMBL
Match: A0A6J1JB33 (pentatricopeptide repeat-containing protein At5g44230 OS=Cucurbita maxima OX=3661 GN=LOC111483382 PE=3 SV=1)

HSP 1 Score: 1322.4 bits (3421), Expect = 0.0e+00
Identity = 637/650 (98.00%), Postives = 644/650 (99.08%), Query Frame = 0


Query: 1   MVGLSRNFSTVCKLSHLQPSQTQATSNFIPFSQLQQQRKLLEWRLISILHDCTDFSQIKQ 60
           M+GLSRNFSTVCKLS+LQP QTQAT NFIPFSQLQQQRKLLEWRLISILHDCTDFSQIKQ
Sbjct: 1   MIGLSRNFSTVCKLSYLQPRQTQATPNFIPFSQLQQQRKLLEWRLISILHDCTDFSQIKQ 60

Query: 61  VHGQIICNGLSQCSYVLTKLIRTLSKVDVPMDCYPRLVFGQVNYPNPFLWTAMIRGYALQ 120
           VHGQIICNGLSQCSYVLTKLIR LSKVDVPMDCYPRLVFGQVNYPNPFLWTAMIRGYALQ
Sbjct: 61  VHGQIICNGLSQCSYVLTKLIRMLSKVDVPMDCYPRLVFGQVNYPNPFLWTAMIRGYALQ 120

Query: 121 GPFTESINLYTNMRRNGVSPVSFTFSALFKACGASLNLDLGRQVHAQTILIGGFASDLYV 180
           GPFTESINLYTNMR NGVSPVSFTFSALFKACGASLNLDLGRQVHAQTILIGGFASDLYV
Sbjct: 121 GPFTESINLYTNMRGNGVSPVSFTFSALFKACGASLNLDLGRQVHAQTILIGGFASDLYV 180

Query: 181 GNTMIDMYVKCGVLGCGRKVFDEMSERDVVSWTELIVAYAKFGDMESARGLFDELPLKDM 240
           GNTMIDMYVKCGVLGCGRKVFDEMSERDVVSWTELIVAYAKFGDMESARGLFDELPLKDM
Sbjct: 181 GNTMIDMYVKCGVLGCGRKVFDEMSERDVVSWTELIVAYAKFGDMESARGLFDELPLKDM 240

Query: 241 VAWTAMVTGYAQNARPKEALEYFQKMQDVGIETDEVTLVGVISACAQLGAVKYANWIRDI 300
           VAWTAMVTGYAQNARPKEALEYFQKMQDVGIETDEVTLVGVISACAQLGAVKYANWIRDI
Sbjct: 241 VAWTAMVTGYAQNARPKEALEYFQKMQDVGIETDEVTLVGVISACAQLGAVKYANWIRDI 300

Query: 301 AERSGFGPYENVMVGSALIDMYSKCGSPDEAYKVFEGMKERNVFSYSSMIVGYAMHGRAH 360
           AERSGFGPYE+VMVGSALIDMYSKCGSPDEAYK+FEGMKERNVFSYSSMIVGYAMHGRAH
Sbjct: 301 AERSGFGPYEHVMVGSALIDMYSKCGSPDEAYKIFEGMKERNVFSYSSMIVGYAMHGRAH 360

Query: 361 SALQLFHEMLKTEIRPNKVTFIGVLSACSHAGMVEQGRQLFAKMEKYFNVTPSPDHYACM 420
           SALQLFHEMLKTEIRPNKVTFIGVLSACSHAGMVEQGRQLFAKMEKYFNVTPSPDHYACM
Sbjct: 361 SALQLFHEMLKTEIRPNKVTFIGVLSACSHAGMVEQGRQLFAKMEKYFNVTPSPDHYACM 420

Query: 421 VDLLGRGGCLEEALELIETMTMEPHGGVWGALLGACRIHGNPDIARVAADQLFKLEPDGI 480
           VDLLGRGGCLEEALELIETM MEPHGGVWGALLGACRIHGNP+IA+VAADQLFKLEPDGI
Sbjct: 421 VDLLGRGGCLEEALELIETMPMEPHGGVWGALLGACRIHGNPNIAQVAADQLFKLEPDGI 480

Query: 481 GNYILLSNIYASAGRWEEVSKLRKVIRAKGLKKNPGCSWFEGKKGDIHEFFADDATHQRS 540
           GNYILLSNIYASAGRWEEVSKLRKVIRAKGLKKNPGCSWFEGKKGDIHEFFADDATHQRS
Sbjct: 481 GNYILLSNIYASAGRWEEVSKLRKVIRAKGLKKNPGCSWFEGKKGDIHEFFADDATHQRS 540

Query: 541 SEIRQALRQLLERLRAHGYKPNLSSVPYDLTDDEKERILMSHSEKLALAYGLLCTEAGET 600
           SEIRQALRQLL RLRAHGYKPNLSSVPYDLTDDEKERILMSHSEKLALAYG+LCTEAGET
Sbjct: 541 SEIRQALRQLLVRLRAHGYKPNLSSVPYDLTDDEKERILMSHSEKLALAYGMLCTEAGET 600

Query: 601 ITIMKNLRICEDCHNVMCAASEITGREIIIRDNMRFHHFHNGTCSCGNFW 651
           ITIMKNLRICEDCHNVMCAASEITGREIIIRDNMRFHHFHNGTCSCGNFW
Sbjct: 601 ITIMKNLRICEDCHNVMCAASEITGREIIIRDNMRFHHFHNGTCSCGNFW 650

[Close]

BLAST of CmoCh16G006900 vs. ExPASy TrEMBL
Match: A0A6J1C512 (pentatricopeptide repeat-containing protein At5g44230 OS=Momordica charantia OX=3673 GN=LOC111008431 PE=3 SV=1)

HSP 1 Score: 1218.4 bits (3151), Expect = 0.0e+00
Identity = 582/650 (89.54%), Postives = 615/650 (94.62%), Query Frame = 0


Query: 1   MVGLSRNFSTVCKLSHLQPSQTQATSNFIPFSQLQQQRKLLEWRLISILHDCTDFSQIKQ 60
           M+GLSRNFSTV KLSHLQ  QTQAT NF+PFSQLQQQRKLLEWRLI+ILHDCT FSQIK+
Sbjct: 1   MIGLSRNFSTVSKLSHLQQLQTQATPNFVPFSQLQQQRKLLEWRLIAILHDCTHFSQIKE 60

Query: 61  VHGQIICNGLSQCSYVLTKLIRTLSKVDVPMDCYPRLVFGQVNYPNPFLWTAMIRGYALQ 120
           VHG II NGL QC YVLTKLIR L+K+DVPMD +P LVF QV YPNPFLWTAMIRGYALQ
Sbjct: 61  VHGHIIRNGLGQCCYVLTKLIRMLTKIDVPMDSFPSLVFQQVKYPNPFLWTAMIRGYALQ 120

Query: 121 GPFTESINLYTNMRRNGVSPVSFTFSALFKACGASLNLDLGRQVHAQTILIGGFASDLYV 180
           GPF+ES+NLYT MRR+GVSPVSFTFSALFKACGA L+L LGRQVHAQTILIGGFASDLYV
Sbjct: 121 GPFSESVNLYTRMRRDGVSPVSFTFSALFKACGAVLDLGLGRQVHAQTILIGGFASDLYV 180

Query: 181 GNTMIDMYVKCGVLGCGRKVFDEMSERDVVSWTELIVAYAKFGDMESARGLFDELPLKDM 240
           GNTMIDMYVKCG L CGRKVFDEMSERDVVSWTELIVAYAKFGDMESA GLFD LP+KDM
Sbjct: 181 GNTMIDMYVKCGFLSCGRKVFDEMSERDVVSWTELIVAYAKFGDMESASGLFDGLPVKDM 240

Query: 241 VAWTAMVTGYAQNARPKEALEYFQKMQDVGIETDEVTLVGVISACAQLGAVKYANWIRDI 300
           VAWTAMVTGYAQNARPKEALEYFQKMQDVG+ETDEVTLVGV+SACAQLGA+KYANWIRDI
Sbjct: 241 VAWTAMVTGYAQNARPKEALEYFQKMQDVGMETDEVTLVGVVSACAQLGAIKYANWIRDI 300

Query: 301 AERSGFGPYENVMVGSALIDMYSKCGSPDEAYKVFEGMKERNVFSYSSMIVGYAMHGRAH 360
           AE+SGFGP ENV+VGSALIDMYSKCGSPDEA+KVFEGM+ERNVFSYSSMIVGYAMHGRAH
Sbjct: 301 AEKSGFGPSENVVVGSALIDMYSKCGSPDEAHKVFEGMQERNVFSYSSMIVGYAMHGRAH 360

Query: 361 SALQLFHEMLKTEIRPNKVTFIGVLSACSHAGMVEQGRQLFAKMEKYFNVTPSPDHYACM 420
           SALQLFHEMLKTEIRPNKVTFIGVL+ACSHAGMVEQGRQLFAKMEKYF+V PSPDHYACM
Sbjct: 361 SALQLFHEMLKTEIRPNKVTFIGVLTACSHAGMVEQGRQLFAKMEKYFSVAPSPDHYACM 420

Query: 421 VDLLGRGGCLEEALELIETMTMEPHGGVWGALLGACRIHGNPDIARVAADQLFKLEPDGI 480
           VDLLGR GCLEEALELIETM M+PHGGVWGALLGACRIHGNPDIA++AA QLF+LEPDGI
Sbjct: 421 VDLLGRAGCLEEALELIETMPMDPHGGVWGALLGACRIHGNPDIAQLAASQLFELEPDGI 480

Query: 481 GNYILLSNIYASAGRWEEVSKLRKVIRAKGLKKNPGCSWFEGKKGDIHEFFADDATHQRS 540
           GNYILLSNIYASAGRWEEVSKLR+V+R KGLKKNPGCSWFEGKKG+IHEFFA D TH RS
Sbjct: 481 GNYILLSNIYASAGRWEEVSKLRRVMREKGLKKNPGCSWFEGKKGEIHEFFAGDTTHPRS 540

Query: 541 SEIRQALRQLLERLRAHGYKPNLSSVPYDLTDDEKERILMSHSEKLALAYGLLCTEAGET 600
           +EI+QAL  LLERLRAHGYKPNLSSVPYDLTDDEK+RILMSHSEKLALAYGLL T+AG+T
Sbjct: 541 NEIKQALEHLLERLRAHGYKPNLSSVPYDLTDDEKKRILMSHSEKLALAYGLLSTDAGDT 600

Query: 601 ITIMKNLRICEDCHNVMCAASEITGREIIIRDNMRFHHFHNGTCSCGNFW 651
           I IMKNLRICEDCH VMCAASEITGREIIIRDNMRFHHFHNGTCSCGNFW
Sbjct: 601 IKIMKNLRICEDCHTVMCAASEITGREIIIRDNMRFHHFHNGTCSCGNFW 650

[Close]

BLAST of CmoCh16G006900 vs. ExPASy TrEMBL
Match: A0A0A0KUQ8 (DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G045030 PE=3 SV=1)

HSP 1 Score: 1193.3 bits (3086), Expect = 0.0e+00
Identity = 567/650 (87.23%), Postives = 606/650 (93.23%), Query Frame = 0


Query: 1   MVGLSRNFSTVCKLSHLQPSQTQATSNFIPFSQLQQQRKLLEWRLISILHDCTDFSQIKQ 60
           M+G SRN STV KLSHLQ  QT+ + NFIPF QLQ QRKLLEWRL+SILHDCT FSQIKQ
Sbjct: 1   MIGFSRNLSTVSKLSHLQNLQTRGSPNFIPFPQLQHQRKLLEWRLMSILHDCTLFSQIKQ 60

Query: 61  VHGQIICNGLSQCSYVLTKLIRTLSKVDVPMDCYPRLVFGQVNYPNPFLWTAMIRGYALQ 120
           VH  II NGLSQCSYVLTKLIR L+KVDVPM  YP LVFGQVNYPNPFLWTAMIRGYALQ
Sbjct: 61  VHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYALQ 120

Query: 121 GPFTESINLYTNMRRNGVSPVSFTFSALFKACGASLNLDLGRQVHAQTILIGGFASDLYV 180
           G  +ES N YT MRR+GV PVSFTFSALFKACGA+LN+DLG+QVHAQTILIGGFASDLYV
Sbjct: 121 GLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDLYV 180

Query: 181 GNTMIDMYVKCGVLGCGRKVFDEMSERDVVSWTELIVAYAKFGDMESARGLFDELPLKDM 240
           GN+MID+YVKCG LGC RKVFDEMSERDVVSWTELIVAYAK+GDMESA GLFD+LPLKDM
Sbjct: 181 GNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPLKDM 240

Query: 241 VAWTAMVTGYAQNARPKEALEYFQKMQDVGIETDEVTLVGVISACAQLGAVKYANWIRDI 300
           VAWTAMVTGYAQN RPKEALEYFQKMQDVG+ETDEVTL GVISACAQLGAVK+ANWIRDI
Sbjct: 241 VAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDI 300

Query: 301 AERSGFGPYENVMVGSALIDMYSKCGSPDEAYKVFEGMKERNVFSYSSMIVGYAMHGRAH 360
           AERSGFGP  NV+VGSALIDMYSKCGSPDEAYKVFE MKERNVFSYSSMI+GYAMHGRAH
Sbjct: 301 AERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAH 360

Query: 361 SALQLFHEMLKTEIRPNKVTFIGVLSACSHAGMVEQGRQLFAKMEKYFNVTPSPDHYACM 420
           SALQLFH+MLKTEIRPNKVTFIG+LSACSHAG+VEQGRQLFAKMEK+F V PSPDHYACM
Sbjct: 361 SALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACM 420

Query: 421 VDLLGRGGCLEEALELIETMTMEPHGGVWGALLGACRIHGNPDIARVAADQLFKLEPDGI 480
           VDLLGR GCLEEAL+L++TM MEP+GGVWGALLGACRIHGNPDIA++AA++LFKLEP+GI
Sbjct: 421 VDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANELFKLEPNGI 480

Query: 481 GNYILLSNIYASAGRWEEVSKLRKVIRAKGLKKNPGCSWFEGKKGDIHEFFADDATHQRS 540
           GNYILLSNIYASAGRWEEVSKLRKVIR KG KKNPGCSWFEGK G+IH+FFA D TH RS
Sbjct: 481 GNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDFFAGDTTHPRS 540

Query: 541 SEIRQALRQLLERLRAHGYKPNLSSVPYDLTDDEKERILMSHSEKLALAYGLLCTEAGET 600
           SEIRQAL+QL+ERLR+HGYKPNL S PYDLTDDEKERILMSHSEKLALAYGLLCTEAG+T
Sbjct: 541 SEIRQALKQLIERLRSHGYKPNLGSAPYDLTDDEKERILMSHSEKLALAYGLLCTEAGDT 600

Query: 601 ITIMKNLRICEDCHNVMCAASEITGREIIIRDNMRFHHFHNGTCSCGNFW 651
           I IMKN+RICEDCHNVMCAASEITGREII+RDNMRFHHFHNGTCSCGNFW
Sbjct: 601 IKIMKNIRICEDCHNVMCAASEITGREIIVRDNMRFHHFHNGTCSCGNFW 650

[Close]

BLAST of CmoCh16G006900 vs. ExPASy TrEMBL
Match: A0A5A7TN81 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G00720 PE=3 SV=1)

HSP 1 Score: 1191.4 bits (3081), Expect = 0.0e+00
Identity = 570/650 (87.69%), Postives = 605/650 (93.08%), Query Frame = 0


Query: 1   MVGLSRNFSTVCKLSHLQPSQTQATSNFIPFSQLQQQRKLLEWRLISILHDCTDFSQIKQ 60
           M+G SRN STV KLSHLQ  QT A+ N IPF QLQ QRKLLEWRL+SILHDCT FSQIKQ
Sbjct: 14  MIGFSRNLSTVSKLSHLQNLQTPASPNIIPFPQLQHQRKLLEWRLMSILHDCTLFSQIKQ 73

Query: 61  VHGQIICNGLSQCSYVLTKLIRTLSKVDVPMDCYPRLVFGQVNYPNPFLWTAMIRGYALQ 120
           VHG II NGLSQCSYVLTKLIR L+KVDVPM  YP LVFGQVNYPNPFLWTAMIRGYALQ
Sbjct: 74  VHGHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYALQ 133

Query: 121 GPFTESINLYTNMRRNGVSPVSFTFSALFKACGASLNLDLGRQVHAQTILIGGFASDLYV 180
           G  +ES N YT MRR+GV PVSFTFSALFKACGASLN+DLG+QVHAQTILIGGFASDLYV
Sbjct: 134 GLVSESTNFYTRMRRDGVGPVSFTFSALFKACGASLNMDLGKQVHAQTILIGGFASDLYV 193

Query: 181 GNTMIDMYVKCGVLGCGRKVFDEMSERDVVSWTELIVAYAKFGDMESARGLFDELPLKDM 240
           GN+MID+YVKCG LGC RKVFDEMSERDVVSWTELIVAYAK+GDMESA GLFD+LPLKDM
Sbjct: 194 GNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPLKDM 253

Query: 241 VAWTAMVTGYAQNARPKEALEYFQKMQDVGIETDEVTLVGVISACAQLGAVKYANWIRDI 300
           VAWTAMVTGYAQNARPKEALEYFQKMQDVG+ETDEVTLVGVISACAQLGAVK+ANWIRDI
Sbjct: 254 VAWTAMVTGYAQNARPKEALEYFQKMQDVGMETDEVTLVGVISACAQLGAVKHANWIRDI 313

Query: 301 AERSGFGPYENVMVGSALIDMYSKCGSPDEAYKVFEGMKERNVFSYSSMIVGYAMHGRAH 360
           AERSGFGP  NV+VGSALIDMYSKCGSPDEAYKVFE MKERNVFSYSSMI+GYAMHGRA 
Sbjct: 314 AERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAR 373

Query: 361 SALQLFHEMLKTEIRPNKVTFIGVLSACSHAGMVEQGRQLFAKMEKYFNVTPSPDHYACM 420
           SALQLFHEMLKTEIRPNKVTF+GVLSACSHAG+VEQGRQ+FAKMEK+F V PSPDHYACM
Sbjct: 374 SALQLFHEMLKTEIRPNKVTFLGVLSACSHAGLVEQGRQVFAKMEKFFGVAPSPDHYACM 433

Query: 421 VDLLGRGGCLEEALELIETMTMEPHGGVWGALLGACRIHGNPDIARVAADQLFKLEPDGI 480
           VDLLGR GCLEEAL+L++TM MEP+GGVWGALLGACRIHGNPDIA++AA+QLF LEP+ I
Sbjct: 434 VDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANQLFNLEPNSI 493

Query: 481 GNYILLSNIYASAGRWEEVSKLRKVIRAKGLKKNPGCSWFEGKKGDIHEFFADDATHQRS 540
           GNYILLSNIYASAGRWEEVSKLRKVIR KGLKKNPGCSWFEGK G+IH+FFA D TH RS
Sbjct: 494 GNYILLSNIYASAGRWEEVSKLRKVIREKGLKKNPGCSWFEGKNGEIHDFFAGDTTHSRS 553

Query: 541 SEIRQALRQLLERLRAHGYKPNLSSVPYDLTDDEKERILMSHSEKLALAYGLLCTEAGET 600
           SEIRQAL+QL+ERLRAHGYKPNLSS PYD+TDDEKERILMSHSEKLALAYGLLCT AG+T
Sbjct: 554 SEIRQALKQLIERLRAHGYKPNLSSAPYDMTDDEKERILMSHSEKLALAYGLLCTSAGDT 613

Query: 601 ITIMKNLRICEDCHNVMCAASEITGREIIIRDNMRFHHFHNGTCSCGNFW 651
           I IMKN+RICEDCHNVMCAASEITGREIIIRDNMRFHHFH GTCSCGNFW
Sbjct: 614 IKIMKNIRICEDCHNVMCAASEITGREIIIRDNMRFHHFHKGTCSCGNFW 663

[Close]

BLAST of CmoCh16G006900 vs. NCBI nr
Match: XP_022929534.1 (pentatricopeptide repeat-containing protein At5g44230 [Cucurbita moschata])

HSP 1 Score: 1345.5 bits (3481), Expect = 0.0e+00
Identity = 650/650 (100.00%), Postives = 650/650 (100.00%), Query Frame = 0


Query: 1   MVGLSRNFSTVCKLSHLQPSQTQATSNFIPFSQLQQQRKLLEWRLISILHDCTDFSQIKQ 60
           MVGLSRNFSTVCKLSHLQPSQTQATSNFIPFSQLQQQRKLLEWRLISILHDCTDFSQIKQ
Sbjct: 1   MVGLSRNFSTVCKLSHLQPSQTQATSNFIPFSQLQQQRKLLEWRLISILHDCTDFSQIKQ 60

Query: 61  VHGQIICNGLSQCSYVLTKLIRTLSKVDVPMDCYPRLVFGQVNYPNPFLWTAMIRGYALQ 120
           VHGQIICNGLSQCSYVLTKLIRTLSKVDVPMDCYPRLVFGQVNYPNPFLWTAMIRGYALQ
Sbjct: 61  VHGQIICNGLSQCSYVLTKLIRTLSKVDVPMDCYPRLVFGQVNYPNPFLWTAMIRGYALQ 120

Query: 121 GPFTESINLYTNMRRNGVSPVSFTFSALFKACGASLNLDLGRQVHAQTILIGGFASDLYV 180
           GPFTESINLYTNMRRNGVSPVSFTFSALFKACGASLNLDLGRQVHAQTILIGGFASDLYV
Sbjct: 121 GPFTESINLYTNMRRNGVSPVSFTFSALFKACGASLNLDLGRQVHAQTILIGGFASDLYV 180

Query: 181 GNTMIDMYVKCGVLGCGRKVFDEMSERDVVSWTELIVAYAKFGDMESARGLFDELPLKDM 240
           GNTMIDMYVKCGVLGCGRKVFDEMSERDVVSWTELIVAYAKFGDMESARGLFDELPLKDM
Sbjct: 181 GNTMIDMYVKCGVLGCGRKVFDEMSERDVVSWTELIVAYAKFGDMESARGLFDELPLKDM 240

Query: 241 VAWTAMVTGYAQNARPKEALEYFQKMQDVGIETDEVTLVGVISACAQLGAVKYANWIRDI 300
           VAWTAMVTGYAQNARPKEALEYFQKMQDVGIETDEVTLVGVISACAQLGAVKYANWIRDI
Sbjct: 241 VAWTAMVTGYAQNARPKEALEYFQKMQDVGIETDEVTLVGVISACAQLGAVKYANWIRDI 300

Query: 301 AERSGFGPYENVMVGSALIDMYSKCGSPDEAYKVFEGMKERNVFSYSSMIVGYAMHGRAH 360
           AERSGFGPYENVMVGSALIDMYSKCGSPDEAYKVFEGMKERNVFSYSSMIVGYAMHGRAH
Sbjct: 301 AERSGFGPYENVMVGSALIDMYSKCGSPDEAYKVFEGMKERNVFSYSSMIVGYAMHGRAH 360

Query: 361 SALQLFHEMLKTEIRPNKVTFIGVLSACSHAGMVEQGRQLFAKMEKYFNVTPSPDHYACM 420
           SALQLFHEMLKTEIRPNKVTFIGVLSACSHAGMVEQGRQLFAKMEKYFNVTPSPDHYACM
Sbjct: 361 SALQLFHEMLKTEIRPNKVTFIGVLSACSHAGMVEQGRQLFAKMEKYFNVTPSPDHYACM 420

Query: 421 VDLLGRGGCLEEALELIETMTMEPHGGVWGALLGACRIHGNPDIARVAADQLFKLEPDGI 480
           VDLLGRGGCLEEALELIETMTMEPHGGVWGALLGACRIHGNPDIARVAADQLFKLEPDGI
Sbjct: 421 VDLLGRGGCLEEALELIETMTMEPHGGVWGALLGACRIHGNPDIARVAADQLFKLEPDGI 480

Query: 481 GNYILLSNIYASAGRWEEVSKLRKVIRAKGLKKNPGCSWFEGKKGDIHEFFADDATHQRS 540
           GNYILLSNIYASAGRWEEVSKLRKVIRAKGLKKNPGCSWFEGKKGDIHEFFADDATHQRS
Sbjct: 481 GNYILLSNIYASAGRWEEVSKLRKVIRAKGLKKNPGCSWFEGKKGDIHEFFADDATHQRS 540

Query: 541 SEIRQALRQLLERLRAHGYKPNLSSVPYDLTDDEKERILMSHSEKLALAYGLLCTEAGET 600
           SEIRQALRQLLERLRAHGYKPNLSSVPYDLTDDEKERILMSHSEKLALAYGLLCTEAGET
Sbjct: 541 SEIRQALRQLLERLRAHGYKPNLSSVPYDLTDDEKERILMSHSEKLALAYGLLCTEAGET 600

Query: 601 ITIMKNLRICEDCHNVMCAASEITGREIIIRDNMRFHHFHNGTCSCGNFW 651
           ITIMKNLRICEDCHNVMCAASEITGREIIIRDNMRFHHFHNGTCSCGNFW
Sbjct: 601 ITIMKNLRICEDCHNVMCAASEITGREIIIRDNMRFHHFHNGTCSCGNFW 650

[Close]

BLAST of CmoCh16G006900 vs. NCBI nr
Match: KAG6577231.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1336.6 bits (3458), Expect = 0.0e+00
Identity = 645/650 (99.23%), Postives = 647/650 (99.54%), Query Frame = 0


Query: 1   MVGLSRNFSTVCKLSHLQPSQTQATSNFIPFSQLQQQRKLLEWRLISILHDCTDFSQIKQ 60
           MVGLSRNFSTVCKLSHLQPSQTQATSNFIPFSQLQQQRKLLEWRLISILHDCTDFSQIKQ
Sbjct: 1   MVGLSRNFSTVCKLSHLQPSQTQATSNFIPFSQLQQQRKLLEWRLISILHDCTDFSQIKQ 60

Query: 61  VHGQIICNGLSQCSYVLTKLIRTLSKVDVPMDCYPRLVFGQVNYPNPFLWTAMIRGYALQ 120
           VHGQIICNGLSQCSYVLTKLIRTLSKVDVPMDCYPRLVFGQVNYPNPFLWTAMIRGYALQ
Sbjct: 61  VHGQIICNGLSQCSYVLTKLIRTLSKVDVPMDCYPRLVFGQVNYPNPFLWTAMIRGYALQ 120

Query: 121 GPFTESINLYTNMRRNGVSPVSFTFSALFKACGASLNLDLGRQVHAQTILIGGFASDLYV 180
           GPFTESINLYTNMRRNGVSPVSFTFSALFKACGASLNLDLGRQVHAQTILIGGFASDLYV
Sbjct: 121 GPFTESINLYTNMRRNGVSPVSFTFSALFKACGASLNLDLGRQVHAQTILIGGFASDLYV 180

Query: 181 GNTMIDMYVKCGVLGCGRKVFDEMSERDVVSWTELIVAYAKFGDMESARGLFDELPLKDM 240
           GNTMIDMYVKCGVLGCGRKVFDEMSERDVVSWTELIVAYAKFGDMESARGLFDELPLKDM
Sbjct: 181 GNTMIDMYVKCGVLGCGRKVFDEMSERDVVSWTELIVAYAKFGDMESARGLFDELPLKDM 240

Query: 241 VAWTAMVTGYAQNARPKEALEYFQKMQDVGIETDEVTLVGVISACAQLGAVKYANWIRDI 300
           VAWTAMVTGYAQNARPKEALEYFQKMQDVGIETDEVTLVGVISACAQLGAVKYANWIRDI
Sbjct: 241 VAWTAMVTGYAQNARPKEALEYFQKMQDVGIETDEVTLVGVISACAQLGAVKYANWIRDI 300

Query: 301 AERSGFGPYENVMVGSALIDMYSKCGSPDEAYKVFEGMKERNVFSYSSMIVGYAMHGRAH 360
           AERS FGPYENVMVGSALIDMYSKCGSPDEAYKVFEGMKERNVFSYSSMIVGYAMHGRAH
Sbjct: 301 AERSSFGPYENVMVGSALIDMYSKCGSPDEAYKVFEGMKERNVFSYSSMIVGYAMHGRAH 360

Query: 361 SALQLFHEMLKTEIRPNKVTFIGVLSACSHAGMVEQGRQLFAKMEKYFNVTPSPDHYACM 420
           SALQLFHEMLKTEIRPNKVTFIGVLSACSHAGMVEQGRQLFAKMEKYFNVTPSPDHYACM
Sbjct: 361 SALQLFHEMLKTEIRPNKVTFIGVLSACSHAGMVEQGRQLFAKMEKYFNVTPSPDHYACM 420

Query: 421 VDLLGRGGCLEEALELIETMTMEPHGGVWGALLGACRIHGNPDIARVAADQLFKLEPDGI 480
           VDLLGRGGCLEEALELIETM MEPHGGVWGALLGACRIHGNPDIARVAADQLFKLEPDGI
Sbjct: 421 VDLLGRGGCLEEALELIETMPMEPHGGVWGALLGACRIHGNPDIARVAADQLFKLEPDGI 480

Query: 481 GNYILLSNIYASAGRWEEVSKLRKVIRAKGLKKNPGCSWFEGKKGDIHEFFADDATHQRS 540
           GNYILLSNIYASAGRWEEVSKLRKVIRAKGLKKNPGCSWFEGKKGDIHEFFADDATHQRS
Sbjct: 481 GNYILLSNIYASAGRWEEVSKLRKVIRAKGLKKNPGCSWFEGKKGDIHEFFADDATHQRS 540

Query: 541 SEIRQALRQLLERLRAHGYKPNLSSVPYDLTDDEKERILMSHSEKLALAYGLLCTEAGET 600
           SEIR+ALRQLLERLR HGYKPNLSSVPYDLTD+EKERILMSHSEKLALAYGLLCTEAGET
Sbjct: 541 SEIREALRQLLERLRGHGYKPNLSSVPYDLTDEEKERILMSHSEKLALAYGLLCTEAGET 600

Query: 601 ITIMKNLRICEDCHNVMCAASEITGREIIIRDNMRFHHFHNGTCSCGNFW 651
           ITIMKNLRICEDCHNVMCAASEITGREIIIRDNMRFHHFHNGTCSCGNFW
Sbjct: 601 ITIMKNLRICEDCHNVMCAASEITGREIIIRDNMRFHHFHNGTCSCGNFW 650

[Close]

BLAST of CmoCh16G006900 vs. NCBI nr
Match: KAG7015321.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1334.7 bits (3453), Expect = 0.0e+00
Identity = 643/650 (98.92%), Postives = 646/650 (99.38%), Query Frame = 0


Query: 1   MVGLSRNFSTVCKLSHLQPSQTQATSNFIPFSQLQQQRKLLEWRLISILHDCTDFSQIKQ 60
           MVGLSRNFSTVCKLSHLQPSQTQ TSNF+PFSQLQQQRKLLEWRLISILHDCTDFSQIKQ
Sbjct: 1   MVGLSRNFSTVCKLSHLQPSQTQTTSNFVPFSQLQQQRKLLEWRLISILHDCTDFSQIKQ 60

Query: 61  VHGQIICNGLSQCSYVLTKLIRTLSKVDVPMDCYPRLVFGQVNYPNPFLWTAMIRGYALQ 120
           VHGQIICNGLSQCSYVLTKLIRTLSKVDVPMDCYPRLVFGQVNYPNPFLWTAMIRGYALQ
Sbjct: 61  VHGQIICNGLSQCSYVLTKLIRTLSKVDVPMDCYPRLVFGQVNYPNPFLWTAMIRGYALQ 120

Query: 121 GPFTESINLYTNMRRNGVSPVSFTFSALFKACGASLNLDLGRQVHAQTILIGGFASDLYV 180
           GPFTESINLYTNMRRNGVSPVSFTFSALFKACGASLNLDLGRQVHAQTILIGGFASDLYV
Sbjct: 121 GPFTESINLYTNMRRNGVSPVSFTFSALFKACGASLNLDLGRQVHAQTILIGGFASDLYV 180

Query: 181 GNTMIDMYVKCGVLGCGRKVFDEMSERDVVSWTELIVAYAKFGDMESARGLFDELPLKDM 240
           GNTMIDMYVKCGVLGCGRKVFDEMSERDVVSWTELIVAYAKFGDMESARGLFDELPLKDM
Sbjct: 181 GNTMIDMYVKCGVLGCGRKVFDEMSERDVVSWTELIVAYAKFGDMESARGLFDELPLKDM 240

Query: 241 VAWTAMVTGYAQNARPKEALEYFQKMQDVGIETDEVTLVGVISACAQLGAVKYANWIRDI 300
           VAWTAMVTGYAQNARPKEALEYFQKMQDVGIETDEVTLVGVISACAQLGAVKYANWIRDI
Sbjct: 241 VAWTAMVTGYAQNARPKEALEYFQKMQDVGIETDEVTLVGVISACAQLGAVKYANWIRDI 300

Query: 301 AERSGFGPYENVMVGSALIDMYSKCGSPDEAYKVFEGMKERNVFSYSSMIVGYAMHGRAH 360
           AERS FGPYENVMVGSALIDMYSKCGSPDEAYKVFEGMKERNVFSYSSMIVGYAMHGRAH
Sbjct: 301 AERSSFGPYENVMVGSALIDMYSKCGSPDEAYKVFEGMKERNVFSYSSMIVGYAMHGRAH 360

Query: 361 SALQLFHEMLKTEIRPNKVTFIGVLSACSHAGMVEQGRQLFAKMEKYFNVTPSPDHYACM 420
           SALQLFHEMLKTEIRPNKVTFIGVLSACSHAGMVEQGRQLFAKMEKYFNVTPSPDHYACM
Sbjct: 361 SALQLFHEMLKTEIRPNKVTFIGVLSACSHAGMVEQGRQLFAKMEKYFNVTPSPDHYACM 420

Query: 421 VDLLGRGGCLEEALELIETMTMEPHGGVWGALLGACRIHGNPDIARVAADQLFKLEPDGI 480
           VDLLGRGGCLEEALELIETM MEPHGGVWGALLGACRIHGNPDIARVAADQLFKLEPDGI
Sbjct: 421 VDLLGRGGCLEEALELIETMPMEPHGGVWGALLGACRIHGNPDIARVAADQLFKLEPDGI 480

Query: 481 GNYILLSNIYASAGRWEEVSKLRKVIRAKGLKKNPGCSWFEGKKGDIHEFFADDATHQRS 540
           GNYILLSNIYASAGRWEEVSKLRKVIRAKGLKKNPGCSWFEGKKGDIHEFFADDATHQRS
Sbjct: 481 GNYILLSNIYASAGRWEEVSKLRKVIRAKGLKKNPGCSWFEGKKGDIHEFFADDATHQRS 540

Query: 541 SEIRQALRQLLERLRAHGYKPNLSSVPYDLTDDEKERILMSHSEKLALAYGLLCTEAGET 600
           SEIR+ALRQLLERLR HGYKPNLSSVPYDLTD+EKERILMSHSEKLALAYGLLCTEAGET
Sbjct: 541 SEIREALRQLLERLRGHGYKPNLSSVPYDLTDEEKERILMSHSEKLALAYGLLCTEAGET 600

Query: 601 ITIMKNLRICEDCHNVMCAASEITGREIIIRDNMRFHHFHNGTCSCGNFW 651
           ITIMKNLRICEDCHNVMCAASEITGREIIIRDNMRFHHFHNGTCSCGNFW
Sbjct: 601 ITIMKNLRICEDCHNVMCAASEITGREIIIRDNMRFHHFHNGTCSCGNFW 650

[Close]

BLAST of CmoCh16G006900 vs. NCBI nr
Match: XP_023553196.1 (pentatricopeptide repeat-containing protein At5g44230 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1333.9 bits (3451), Expect = 0.0e+00
Identity = 644/650 (99.08%), Postives = 646/650 (99.38%), Query Frame = 0


Query: 1   MVGLSRNFSTVCKLSHLQPSQTQATSNFIPFSQLQQQRKLLEWRLISILHDCTDFSQIKQ 60
           M+GLSRNFSTVCKLSHLQPSQTQATSNFIPFSQLQQQRKLLEWRLISILHDCTDFSQIKQ
Sbjct: 1   MIGLSRNFSTVCKLSHLQPSQTQATSNFIPFSQLQQQRKLLEWRLISILHDCTDFSQIKQ 60

Query: 61  VHGQIICNGLSQCSYVLTKLIRTLSKVDVPMDCYPRLVFGQVNYPNPFLWTAMIRGYALQ 120
           VHGQIICNGLSQCSYVLTKLIR LSKVDVPMDCYPRLVFGQVNYPNPFLWTAMIRGYALQ
Sbjct: 61  VHGQIICNGLSQCSYVLTKLIRMLSKVDVPMDCYPRLVFGQVNYPNPFLWTAMIRGYALQ 120

Query: 121 GPFTESINLYTNMRRNGVSPVSFTFSALFKACGASLNLDLGRQVHAQTILIGGFASDLYV 180
           GPFTESINLYTNMRRNGVSPVSFTFSALFKACGASLNLDLGRQVHAQTILIGGFASDLYV
Sbjct: 121 GPFTESINLYTNMRRNGVSPVSFTFSALFKACGASLNLDLGRQVHAQTILIGGFASDLYV 180

Query: 181 GNTMIDMYVKCGVLGCGRKVFDEMSERDVVSWTELIVAYAKFGDMESARGLFDELPLKDM 240
           GNTMIDMYVKCGVLGCGRKVFDEMSERDVVSWTELIVAYAKFGDMESARGLFDELPLKDM
Sbjct: 181 GNTMIDMYVKCGVLGCGRKVFDEMSERDVVSWTELIVAYAKFGDMESARGLFDELPLKDM 240

Query: 241 VAWTAMVTGYAQNARPKEALEYFQKMQDVGIETDEVTLVGVISACAQLGAVKYANWIRDI 300
           VAWTAMVTGYAQNARPKEALEYFQKMQDVGIETDEVTLVGVISACAQLGAVKYANWIRDI
Sbjct: 241 VAWTAMVTGYAQNARPKEALEYFQKMQDVGIETDEVTLVGVISACAQLGAVKYANWIRDI 300

Query: 301 AERSGFGPYENVMVGSALIDMYSKCGSPDEAYKVFEGMKERNVFSYSSMIVGYAMHGRAH 360
           AERSGFG YENVMVGSALIDMYSKCGSPDEAYKVFEGMKERNVFSYSSMIVGYAMHGRAH
Sbjct: 301 AERSGFGSYENVMVGSALIDMYSKCGSPDEAYKVFEGMKERNVFSYSSMIVGYAMHGRAH 360

Query: 361 SALQLFHEMLKTEIRPNKVTFIGVLSACSHAGMVEQGRQLFAKMEKYFNVTPSPDHYACM 420
           SALQLFHEMLKTEI PNKVTFIGVLSACSHAGMVEQGRQLFAKMEKYFNVTPSPDHYACM
Sbjct: 361 SALQLFHEMLKTEITPNKVTFIGVLSACSHAGMVEQGRQLFAKMEKYFNVTPSPDHYACM 420

Query: 421 VDLLGRGGCLEEALELIETMTMEPHGGVWGALLGACRIHGNPDIARVAADQLFKLEPDGI 480
           VDLLGRGGCLEEALELIETM MEPHGGVWGALLGACRIHGNPDIARVAADQLFKLEPDGI
Sbjct: 421 VDLLGRGGCLEEALELIETMPMEPHGGVWGALLGACRIHGNPDIARVAADQLFKLEPDGI 480

Query: 481 GNYILLSNIYASAGRWEEVSKLRKVIRAKGLKKNPGCSWFEGKKGDIHEFFADDATHQRS 540
           GNYILLSNIYASAGRW+EVSKLRKVIRAKGLKKNPGCSWFEGKKGDIHEFFADDATHQRS
Sbjct: 481 GNYILLSNIYASAGRWDEVSKLRKVIRAKGLKKNPGCSWFEGKKGDIHEFFADDATHQRS 540

Query: 541 SEIRQALRQLLERLRAHGYKPNLSSVPYDLTDDEKERILMSHSEKLALAYGLLCTEAGET 600
           SEIRQALRQLLERLRAHGYKPNLSSVPYDLTDDEKERILMSHSEKLALAYGLLCTEAGET
Sbjct: 541 SEIRQALRQLLERLRAHGYKPNLSSVPYDLTDDEKERILMSHSEKLALAYGLLCTEAGET 600

Query: 601 ITIMKNLRICEDCHNVMCAASEITGREIIIRDNMRFHHFHNGTCSCGNFW 651
           ITIMKNLRICEDCHNVMCAASEITGREIIIRDNMRFHHFHNGTCSCGNFW
Sbjct: 601 ITIMKNLRICEDCHNVMCAASEITGREIIIRDNMRFHHFHNGTCSCGNFW 650

[Close]

BLAST of CmoCh16G006900 vs. NCBI nr
Match: XP_022985345.1 (pentatricopeptide repeat-containing protein At5g44230 [Cucurbita maxima])

HSP 1 Score: 1322.4 bits (3421), Expect = 0.0e+00
Identity = 637/650 (98.00%), Postives = 644/650 (99.08%), Query Frame = 0


Query: 1   MVGLSRNFSTVCKLSHLQPSQTQATSNFIPFSQLQQQRKLLEWRLISILHDCTDFSQIKQ 60
           M+GLSRNFSTVCKLS+LQP QTQAT NFIPFSQLQQQRKLLEWRLISILHDCTDFSQIKQ
Sbjct: 1   MIGLSRNFSTVCKLSYLQPRQTQATPNFIPFSQLQQQRKLLEWRLISILHDCTDFSQIKQ 60

Query: 61  VHGQIICNGLSQCSYVLTKLIRTLSKVDVPMDCYPRLVFGQVNYPNPFLWTAMIRGYALQ 120
           VHGQIICNGLSQCSYVLTKLIR LSKVDVPMDCYPRLVFGQVNYPNPFLWTAMIRGYALQ
Sbjct: 61  VHGQIICNGLSQCSYVLTKLIRMLSKVDVPMDCYPRLVFGQVNYPNPFLWTAMIRGYALQ 120

Query: 121 GPFTESINLYTNMRRNGVSPVSFTFSALFKACGASLNLDLGRQVHAQTILIGGFASDLYV 180
           GPFTESINLYTNMR NGVSPVSFTFSALFKACGASLNLDLGRQVHAQTILIGGFASDLYV
Sbjct: 121 GPFTESINLYTNMRGNGVSPVSFTFSALFKACGASLNLDLGRQVHAQTILIGGFASDLYV 180

Query: 181 GNTMIDMYVKCGVLGCGRKVFDEMSERDVVSWTELIVAYAKFGDMESARGLFDELPLKDM 240
           GNTMIDMYVKCGVLGCGRKVFDEMSERDVVSWTELIVAYAKFGDMESARGLFDELPLKDM
Sbjct: 181 GNTMIDMYVKCGVLGCGRKVFDEMSERDVVSWTELIVAYAKFGDMESARGLFDELPLKDM 240

Query: 241 VAWTAMVTGYAQNARPKEALEYFQKMQDVGIETDEVTLVGVISACAQLGAVKYANWIRDI 300
           VAWTAMVTGYAQNARPKEALEYFQKMQDVGIETDEVTLVGVISACAQLGAVKYANWIRDI
Sbjct: 241 VAWTAMVTGYAQNARPKEALEYFQKMQDVGIETDEVTLVGVISACAQLGAVKYANWIRDI 300

Query: 301 AERSGFGPYENVMVGSALIDMYSKCGSPDEAYKVFEGMKERNVFSYSSMIVGYAMHGRAH 360
           AERSGFGPYE+VMVGSALIDMYSKCGSPDEAYK+FEGMKERNVFSYSSMIVGYAMHGRAH
Sbjct: 301 AERSGFGPYEHVMVGSALIDMYSKCGSPDEAYKIFEGMKERNVFSYSSMIVGYAMHGRAH 360

Query: 361 SALQLFHEMLKTEIRPNKVTFIGVLSACSHAGMVEQGRQLFAKMEKYFNVTPSPDHYACM 420
           SALQLFHEMLKTEIRPNKVTFIGVLSACSHAGMVEQGRQLFAKMEKYFNVTPSPDHYACM
Sbjct: 361 SALQLFHEMLKTEIRPNKVTFIGVLSACSHAGMVEQGRQLFAKMEKYFNVTPSPDHYACM 420

Query: 421 VDLLGRGGCLEEALELIETMTMEPHGGVWGALLGACRIHGNPDIARVAADQLFKLEPDGI 480
           VDLLGRGGCLEEALELIETM MEPHGGVWGALLGACRIHGNP+IA+VAADQLFKLEPDGI
Sbjct: 421 VDLLGRGGCLEEALELIETMPMEPHGGVWGALLGACRIHGNPNIAQVAADQLFKLEPDGI 480

Query: 481 GNYILLSNIYASAGRWEEVSKLRKVIRAKGLKKNPGCSWFEGKKGDIHEFFADDATHQRS 540
           GNYILLSNIYASAGRWEEVSKLRKVIRAKGLKKNPGCSWFEGKKGDIHEFFADDATHQRS
Sbjct: 481 GNYILLSNIYASAGRWEEVSKLRKVIRAKGLKKNPGCSWFEGKKGDIHEFFADDATHQRS 540

Query: 541 SEIRQALRQLLERLRAHGYKPNLSSVPYDLTDDEKERILMSHSEKLALAYGLLCTEAGET 600
           SEIRQALRQLL RLRAHGYKPNLSSVPYDLTDDEKERILMSHSEKLALAYG+LCTEAGET
Sbjct: 541 SEIRQALRQLLVRLRAHGYKPNLSSVPYDLTDDEKERILMSHSEKLALAYGMLCTEAGET 600

Query: 601 ITIMKNLRICEDCHNVMCAASEITGREIIIRDNMRFHHFHNGTCSCGNFW 651
           ITIMKNLRICEDCHNVMCAASEITGREIIIRDNMRFHHFHNGTCSCGNFW
Sbjct: 601 ITIMKNLRICEDCHNVMCAASEITGREIIIRDNMRFHHFHNGTCSCGNFW 650

[Close]

BLAST of CmoCh16G006900 vs. TAIR 10
Match: AT5G44230.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 808.1 bits (2086), Expect = 5.0e-234
Identity = 386/629 (61.37%), Postives = 483/629 (76.79%), Query Frame = 0


Query: 23  QATSNFIPFSQLQQQRKLLEWRLISILHDCTDFSQIKQVHGQIICNGLSQCSYVLTKLIR 82
           + ++N   FS++  Q++LL   LIS L DC + +QIKQ+HG ++  GL Q  Y+LTKLIR
Sbjct: 30  RTSNNSGTFSEISNQKELLVSSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIR 89

Query: 83  TLSKVDVPMDCYPRLVFGQVNYPNPFLWTAMIRGYALQGPFTESINLYTNMRRNGVSPVS 142
           TL+K+ VPMD Y R V   V + NPFLWTA+IRGYA++G F E+I +Y  MR+  ++PVS
Sbjct: 90  TLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVS 149

Query: 143 FTFSALFKACGASLNLDLGRQVHAQTILIGGFASDLYVGNTMIDMYVKCGVLGCGRKVFD 202
           FTFSAL KACG   +L+LGRQ HAQT  + GF   +YVGNTMIDMYVKC  + C RKVFD
Sbjct: 150 FTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCF-VYVGNTMIDMYVKCESIDCARKVFD 209

Query: 203 EMSERDVVSWTELIVAYAKFGDMESARGLFDELPLKDMVAWTAMVTGYAQNARPKEALEY 262
           EM ERDV+SWTELI AYA+ G+ME A  LF+ LP KDMVAWTAMVTG+AQNA+P+EALEY
Sbjct: 210 EMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEY 269

Query: 263 FQKMQDVGIETDEVTLVGVISACAQLGAVKYANWIRDIAERSGFGPYENVMVGSALIDMY 322
           F +M+  GI  DEVT+ G ISACAQLGA KYA+    IA++SG+ P ++V++GSALIDMY
Sbjct: 270 FDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMY 329

Query: 323 SKCGSPDEAYKVFEGMKERNVFSYSSMIVGYAMHGRAHSALQLFHEML-KTEIRPNKVTF 382
           SKCG+ +EA  VF  M  +NVF+YSSMI+G A HGRA  AL LFH M+ +TEI+PN VTF
Sbjct: 330 SKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTF 389

Query: 383 IGVLSACSHAGMVEQGRQLFAKMEKYFNVTPSPDHYACMVDLLGRGGCLEEALELIETMT 442
           +G L ACSH+G+V+QGRQ+F  M + F V P+ DHY CMVDLLGR G L+EALELI+TM+
Sbjct: 390 VGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMS 449

Query: 443 MEPHGGVWGALLGACRIHGNPDIARVAADQLFKLEPDGIGNYILLSNIYASAGRWEEVSK 502
           +EPHGGVWGALLGACRIH NP+IA +AA+ LF+LEPD IGNYILLSN+YASAG W  V +
Sbjct: 450 VEPHGGVWGALLGACRIHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLR 509

Query: 503 LRKVIRAKGLKKNPGCSWFEGKKGDIHEFFADDATHQRSSEIRQALRQLLERLRAHGYKP 562
           +RK+I+ KGLKK P  SW   K G +H+FF  +  H  S++I+  L +L+ERL   GY+P
Sbjct: 510 VRKLIKEKGLKKTPAVSWVVDKNGQMHKFFPGNLNHPMSNKIQDKLEELVERLTVLGYQP 569

Query: 563 NLSSVPYDLTDDEKERILMSHSEKLALAYGLLCTEAGETITIMKNLRICEDCHNVMCAAS 622
           +LSSVPYD++D+ K  IL+ H+EKLALA+ LL T    TITIMKNLR+C DCH  M  AS
Sbjct: 570 DLSSVPYDVSDNAKRLILIQHTEKLALAFSLLTTNRDSTITIMKNLRMCLDCHKFMRLAS 629

Query: 623 EITGREIIIRDNMRFHHFHNGTCSCGNFW 651
           E+TG+ II+RDNMRFHHF +G CSCG+FW
Sbjct: 630 EVTGKVIIMRDNMRFHHFRSGDCSCGDFW 657

[Close]

BLAST of CmoCh16G006900 vs. TAIR 10
Match: AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 500.0 bits (1286), Expect = 2.9e-141
Identity = 250/609 (41.05%), Postives = 371/609 (60.92%), Query Frame = 0


Query: 45  LISILHDCTDFSQIKQVHGQIICNGLSQCSYVLTKLIRT-LSKVDVPMDCYPRLVFGQVN 104
           LI    + +  S  + +HG  + + +    +V   LI    S  D+   C    VF  + 
Sbjct: 137 LIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSAC---KVFTTIK 196

Query: 105 YPNPFLWTAMIRGYALQGPFTESINLYTNMRRNGVSPVSFTFSALFKACGASLNLDLGRQ 164
             +   W +MI G+  +G   +++ L+  M    V     T   +  AC    NL+ GRQ
Sbjct: 197 EKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQ 256

Query: 165 VHAQTILIGGFASDLYVGNTMIDMYVKCGVLGCGRKVFDEMSERDVVSWTELIVAYAKFG 224
           V    I       +L + N M+DMY KCG +   +++FD M E+D V+WT ++  YA   
Sbjct: 257 V-CSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISE 316

Query: 225 DMESARGLFDELPLKDMVAWTAMVTGYAQNARPKEALEYFQKMQ-DVGIETDEVTLVGVI 284
           D E+AR + + +P KD+VAW A+++ Y QN +P EAL  F ++Q    ++ +++TLV  +
Sbjct: 317 DYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTL 376

Query: 285 SACAQLGAVKYANWIRDIAERSGFGPYENVMVGSALIDMYSKCGSPDEAYKVFEGMKERN 344
           SACAQ+GA++   WI    ++ G     N  V SALI MYSKCG  +++ +VF  +++R+
Sbjct: 377 SACAQVGALELGRWIHSYIKKHGI--RMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRD 436

Query: 345 VFSYSSMIVGYAMHGRAHSALQLFHEMLKTEIRPNKVTFIGVLSACSHAGMVEQGRQLFA 404
           VF +S+MI G AMHG  + A+ +F++M +  ++PN VTF  V  ACSH G+V++   LF 
Sbjct: 437 VFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFH 496

Query: 405 KMEKYFNVTPSPDHYACMVDLLGRGGCLEEALELIETMTMEPHGGVWGALLGACRIHGNP 464
           +ME  + + P   HYAC+VD+LGR G LE+A++ IE M + P   VWGALLGAC+IH N 
Sbjct: 497 QMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANL 556

Query: 465 DIARVAADQLFKLEPDGIGNYILLSNIYASAGRWEEVSKLRKVIRAKGLKKNPGCSWFEG 524
           ++A +A  +L +LEP   G ++LLSNIYA  G+WE VS+LRK +R  GLKK PGCS  E 
Sbjct: 557 NLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIE- 616

Query: 525 KKGDIHEFFADDATHQRSSEIRQALRQLLERLRAHGYKPNLSSVPYDLTDDE-KERILMS 584
             G IHEF + D  H  S ++   L +++E+L+++GY+P +S V   + ++E KE+ L  
Sbjct: 617 IDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNL 676

Query: 585 HSEKLALAYGLLCTEAGETITIMKNLRICEDCHNVMCAASEITGREIIIRDNMRFHHFHN 644
           HSEKLA+ YGL+ TEA + I ++KNLR+C DCH+V    S++  REII+RD  RFHHF N
Sbjct: 677 HSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRN 736

Query: 645 GTCSCGNFW 651
           G CSC +FW
Sbjct: 737 GQCSCNDFW 738

[Close]

BLAST of CmoCh16G006900 vs. TAIR 10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 493.4 bits (1269), Expect = 2.7e-139
Identity = 266/726 (36.64%), Postives = 388/726 (53.44%), Query Frame = 0


Query: 27  NFIPFSQLQQQRKLLEWRLISILHDCTDFSQIKQVHGQIICNGLSQCSYVLTKLIR-TLS 86
           +F+P S       +     +S+LH+C     ++ +H Q+I  GL   +Y L+KLI   + 
Sbjct: 18  HFLPSSSDPPYDSIRNHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCIL 77

Query: 87  KVDVPMDCYPRLVFGQVNYPNPFLWTAMIRGYALQGPFTESINLYTNMRRNGVSPVSFTF 146
                   Y   VF  +  PN  +W  M RG+AL      ++ LY  M   G+ P S+TF
Sbjct: 78  SPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTF 137

Query: 147 SALFKACGASLNLDLGRQVHAQTILIGGFASDLYVGNTMIDMYVKCGVLGCGRKVFDEMS 206
             + K+C  S     G+Q+H   + + G   DLYV  ++I MYV+ G L    KVFD+  
Sbjct: 138 PFVLKSCAKSKAFKEGQQIHGHVLKL-GCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSP 197

Query: 207 ERDVVSWTELIVAYAKFGDMESARGLFDELPLKDMVAWTAMVTGYAQNARPKEALEYFQK 266
            RDVVS+T LI  YA  G +E+A+ LFDE+P+KD+V+W AM++GYA+    KEALE F+ 
Sbjct: 198 HRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKD 257

Query: 267 MQDVGIETDEVTLVGVISACAQLGAVKYANWIRDIAERSGFG------------------ 326
           M    +  DE T+V V+SACAQ G+++    +    +  GFG                  
Sbjct: 258 MMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGE 317

Query: 327 -----------PYE-----NVMVG------------------------------------ 386
                      PY+     N ++G                                    
Sbjct: 318 LETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPA 377

Query: 387 -------------------------------SALIDMYSKCGSPDEAYKVFEGMKERNVF 446
                                          ++LIDMY+KCG  + A++VF  +  +++ 
Sbjct: 378 CAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLS 437

Query: 447 SYSSMIVGYAMHGRAHSALQLFHEMLKTEIRPNKVTFIGVLSACSHAGMVEQGRQLFAKM 506
           S+++MI G+AMHGRA ++  LF  M K  I+P+ +TF+G+LSACSH+GM++ GR +F  M
Sbjct: 438 SWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTM 497

Query: 507 EKYFNVTPSPDHYACMVDLLGRGGCLEEALELIETMTMEPHGGVWGALLGACRIHGNPDI 566
            + + +TP  +HY CM+DLLG  G  +EA E+I  M MEP G +W +LL AC++HGN ++
Sbjct: 498 TQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVEL 557

Query: 567 ARVAADQLFKLEPDGIGNYILLSNIYASAGRWEEVSKLRKVIRAKGLKKNPGCSWFEGKK 626
               A+ L K+EP+  G+Y+LLSNIYASAGRW EV+K R ++  KG+KK PGCS  E   
Sbjct: 558 GESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIE-ID 617

Query: 627 GDIHEFFADDATHQRSSEIRQALRQLLERLRAHGYKPNLSSVPYDLTDDEKERILMSHSE 651
             +HEF   D  H R+ EI   L ++   L   G+ P+ S V  ++ ++ KE  L  HSE
Sbjct: 618 SVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSE 677

[Close]

BLAST of CmoCh16G006900 vs. TAIR 10
Match: AT5G06540.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 491.9 bits (1265), Expect = 8.0e-139
Identity = 238/611 (38.95%), Postives = 378/611 (61.87%), Query Frame = 0


Query: 46  ISILHDCTDFSQIKQVHGQIICNGLSQCSYVLTKLIRTL---SKVDVPMDC--YPRLVFG 105
           +++L  C+ FS +K +HG ++   L    +V ++L+      S  + P +   Y   +F 
Sbjct: 16  LALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFS 75

Query: 106 QVNYPNPFLWTAMIRGYALQGPFTESINLYTNMRRNGVSPVSFTFSALFKACGASLNLDL 165
           Q+  PN F++  +IR ++     +++   YT M ++ + P + TF  L KA      + +
Sbjct: 76  QIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLV 135

Query: 166 GRQVHAQTILIGGFASDLYVGNTMIDMYVKCGVLGCGRKVFDEMSERDVVSWTELIVAYA 225
           G Q H+Q +   GF +D+YV N+++ MY  CG +    ++F +M  RDVVSWT ++  Y 
Sbjct: 136 GEQTHSQIVRF-GFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYC 195

Query: 226 KFGDMESARGLFDELPLKDMVAWTAMVTGYAQNARPKEALEYFQKMQDVGIETDEVTLVG 285
           K G +E+AR +FDE+P +++  W+ M+ GYA+N   ++A++ F+ M+  G+  +E  +V 
Sbjct: 196 KCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVS 255

Query: 286 VISACAQLGAVKYANWIRDIAERSGFGPYENVMVGSALIDMYSKCGSPDEAYKVFEGMKE 345
           VIS+CA LGA+++     +   +S      N+++G+AL+DM+ +CG  ++A  VFEG+ E
Sbjct: 256 VISSCAHLGALEFGERAYEYVVKSHM--TVNLILGTALVDMFWRCGDIEKAIHVFEGLPE 315

Query: 346 RNVFSYSSMIVGYAMHGRAHSALQLFHEMLKTEIRPNKVTFIGVLSACSHAGMVEQGRQL 405
            +  S+SS+I G A+HG AH A+  F +M+     P  VTF  VLSACSH G+VE+G ++
Sbjct: 316 TDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEI 375

Query: 406 FAKMEKYFNVTPSPDHYACMVDLLGRGGCLEEALELIETMTMEPHGGVWGALLGACRIHG 465
           +  M+K   + P  +HY C+VD+LGR G L EA   I  M ++P+  + GALLGAC+I+ 
Sbjct: 376 YENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYK 435

Query: 466 NPDIARVAADQLFKLEPDGIGNYILLSNIYASAGRWEEVSKLRKVIRAKGLKKNPGCSWF 525
           N ++A    + L K++P+  G Y+LLSNIYA AG+W+++  LR +++ K +KK PG S  
Sbjct: 436 NTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLI 495

Query: 526 EGKKGDIHEF-FADDATHQRSSEIRQALRQLLERLRAHGYKPNLSSVPYDLTDDEKERIL 585
           E   G I++F   DD  H    +IR+   ++L ++R  GYK N     +D+ ++EKE  +
Sbjct: 496 E-IDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDVDEEEKESSI 555

Query: 586 MSHSEKLALAYGLLCTEAGETITIMKNLRICEDCHNVMCAASEITGREIIIRDNMRFHHF 645
             HSEKLA+AYG++ T+ G TI I+KNLR+CEDCH V    SE+ GRE+I+RD  RFHHF
Sbjct: 556 HMHSEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRDRNRFHHF 615

Query: 646 HNGTCSCGNFW 651
            NG CSC ++W
Sbjct: 616 RNGVCSCRDYW 622

[Close]

BLAST of CmoCh16G006900 vs. TAIR 10
Match: AT5G66520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 488.0 bits (1255), Expect = 1.2e-137
Identity = 237/610 (38.85%), Postives = 368/610 (60.33%), Query Frame = 0


Query: 43  WRLISILHDCTDFSQIKQVHGQIICNGLSQCSYVLTKLIR-TLSKVDVPMDCYPRLVFGQ 102
           +  +S L  C+   ++KQ+H +++  GL Q SY +TK +   +S        Y ++VF  
Sbjct: 15  YETMSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDG 74

Query: 103 VNYPNPFLWTAMIRGYALQGPFTESINLYTNMRRNGVSPVSFTFSALFKACGASLNLDLG 162
            + P+ FLW  MIRG++       S+ LY  M  +     ++TF +L KAC      +  
Sbjct: 75  FDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEET 134

Query: 163 RQVHAQTILIGGFASDLYVGNTMIDMYVKCGVLGCGRKVFDEMSERDVVSWTELIVAYAK 222
            Q+HAQ   + G+ +D+Y  N++I+ Y   G       +FD + E D VSW  +I  Y K
Sbjct: 135 TQIHAQITKL-GYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVK 194

Query: 223 FGDMESARGLFDELPLKDMVAWTAMVTGYAQNARPKEALEYFQKMQDVGIETDEVTLVGV 282
            G M+ A  LF ++  K+ ++WT M++GY Q    KEAL+ F +MQ+  +E D V+L   
Sbjct: 195 AGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANA 254

Query: 283 ISACAQLGAVKYANWIRDIAERSGFGPYENVMVGSALIDMYSKCGSPDEAYKVFEGMKER 342
           +SACAQLGA++   WI     ++      + ++G  LIDMY+KCG  +EA +VF+ +K++
Sbjct: 255 LSACAQLGALEQGKWIHSYLNKTRI--RMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKK 314

Query: 343 NVFSYSSMIVGYAMHGRAHSALQLFHEMLKTEIRPNKVTFIGVLSACSHAGMVEQGRQLF 402
           +V +++++I GYA HG    A+  F EM K  I+PN +TF  VL+ACS+ G+VE+G+ +F
Sbjct: 315 SVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIF 374

Query: 403 AKMEKYFNVTPSPDHYACMVDLLGRGGCLEEALELIETMTMEPHGGVWGALLGACRIHGN 462
             ME+ +N+ P+ +HY C+VDLLGR G L+EA   I+ M ++P+  +WGALL ACRIH N
Sbjct: 375 YSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKN 434

Query: 463 PDIARVAADQLFKLEPDGIGNYILLSNIYASAGRWEEVSKLRKVIRAKGLKKNPGCSWFE 522
            ++     + L  ++P   G Y+  +NI+A   +W++ ++ R++++ +G+ K PGCS   
Sbjct: 435 IELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTI- 494

Query: 523 GKKGDIHEFFADDATHQRSSEIRQALRQLLERLRAHGYKPNLSSVPYDLT-DDEKERILM 582
             +G  HEF A D +H    +I+   R +  +L  +GY P L  +  DL  DDE+E I+ 
Sbjct: 495 SLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVH 554

Query: 583 SHSEKLALAYGLLCTEAGETITIMKNLRICEDCHNVMCAASEITGREIIIRDNMRFHHFH 642
            HSEKLA+ YGL+ T+ G  I IMKNLR+C+DCH V    S+I  R+I++RD  RFHHF 
Sbjct: 555 QHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFR 614

Query: 643 NGTCSCGNFW 651
           +G CSCG++W
Sbjct: 615 DGKCSCGDYW 620

The following BLAST results are available for this feature:

BLAST of CmoCh16G006900 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FFG8	7.1e-233	61.37	Pentatricopeptide repeat-containing protein At5g44230 OS=Arabidopsis thaliana OX...	[more]
O82380	4.1e-140	41.05	Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop...	[more]
Q9LN01	3.9e-138	36.64	Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop...	[more]
Q9FG16	1.1e-137	38.95	Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana OX...	[more]
Q9FJY7	1.6e-136	38.85	Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX...	[more]

BLAST of CmoCh16G006900 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EP11	0.0e+00	100.00	pentatricopeptide repeat-containing protein At5g44230 OS=Cucurbita moschata OX=3...	[more]
A0A6J1JB33	0.0e+00	98.00	pentatricopeptide repeat-containing protein At5g44230 OS=Cucurbita maxima OX=366...	[more]
A0A6J1C512	0.0e+00	89.54	pentatricopeptide repeat-containing protein At5g44230 OS=Momordica charantia OX=...	[more]
A0A0A0KUQ8	0.0e+00	87.23	DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G0450...	[more]
A0A5A7TN81	0.0e+00	87.69	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]

BLAST of CmoCh16G006900 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022929534.1	0.0e+00	100.00	pentatricopeptide repeat-containing protein At5g44230 [Cucurbita moschata]	[more]
KAG6577231.1	0.0e+00	99.23	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]
KAG7015321.1	0.0e+00	98.92	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]
XP_023553196.1	0.0e+00	99.08	pentatricopeptide repeat-containing protein At5g44230 [Cucurbita pepo subsp. pep...	[more]
XP_022985345.1	0.0e+00	98.00	pentatricopeptide repeat-containing protein At5g44230 [Cucurbita maxima]	[more]

BLAST of CmoCh16G006900 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G44230.1	5.0e-234	61.37	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT2G29760.1	2.9e-141	41.05	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G08070.1	2.7e-139	36.64	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G06540.1	8.0e-139	38.95	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G66520.1	1.2e-137	38.85	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 201..299 e-value: 6.6E-25 score: 89.5
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 43..200 e-value: 1.1E-15 score: 59.8 coord: 316..548 e-value: 6.8E-42 score: 145.9
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 182..210 e-value: 4.2E-4 score: 18.3 coord: 379..410 e-value: 0.0029 score: 15.7 coord: 317..343 e-value: 7.2E-5 score: 20.7 coord: 241..274 e-value: 3.9E-6 score: 24.7 coord: 344..377 e-value: 4.2E-7 score: 27.7 coord: 109..140 e-value: 1.9E-4 score: 19.4
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 341..389 e-value: 5.8E-10 score: 39.2 coord: 105..152 e-value: 8.1E-8 score: 32.4 coord: 238..286 e-value: 4.1E-8 score: 33.3
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 182..208 e-value: 0.011 score: 15.9 coord: 417..441 e-value: 0.05 score: 13.9 coord: 210..236 e-value: 9.3E-4 score: 19.3
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 311..341 score: 9.284279
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 239..273 score: 11.268274
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 106..140 score: 11.180584
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 177..211 score: 8.944478
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 342..376 score: 12.013642
IPR032867	DYW domain	PFAM	PF14432	DYW_deaminase	coord: 515..639 e-value: 2.5E-42 score: 143.8
None	No IPR available	PANTHER	PTHR47926	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 15..633
None	No IPR available	PANTHER	PTHR47926:SF205	BNAC09G18050D PROTEIN	coord: 15..633

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh16G006900.1	CmoCh16G006900.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009451	RNA modification
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0008270	zinc ion binding