CmoCh16G006760 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh16G006760
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	zinc-finger homeodomain protein 6-like
Location	Cmo_Chr16: 3347008 .. 3347574 (-)
RNA-Seq Expression	CmoCh16G006760
Synteny	CmoCh16G006760

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAATTAGGAGACCATCAAACCGTTCATTATTCCCTTAGACCCAGACGAGATCACCCTCCTCCGAACCCAGATCCGGCGGCGCCACCCCCTGCGCCGTCGTCTCCGGTTCGCTACCGTGAATGTTTGAGGAACTACGCCGTGAAGAGCGGCGGGCACGTGCTCGATGGGTGCGGAGAGTTCATGCCCAGTGGGGAAGATGGTACTCCTGATGGGTTCAAGTGCGCCGCCTGCGAATGTCACCGGAGTTTCCACCGGAGAGTAGTGGAGGTGGTGGATAACGGCCGGATTAAGGTCGTGAGTTACGGTATGTTTAATTATTATTATTATTATTATTATATATTGAGATCTAATAATGGAAAGGCAAATTATGTTTTATTTAACTATAATACAGGTAAGAGGACAGAACGGCGGAGTTTCGCTGGTCCGGTGATGATGGCGTTCGGCGGTTCGGCGGAAGGCCCGGCGGAGTCGTCAAGCGACGGCGGAGAAGCGTCGGGGAAGGCAAAGAAGCGGGTGAGGACGCAGTTCAGCTTAGAAGAGAAGGGTAAAATGATGAGCCACTAG

mRNA sequence

ATGGAATTAGGAGACCATCAAACCGTTCATTATTCCCTTAGACCCAGACGAGATCACCCTCCTCCGAACCCAGATCCGGCGGCGCCACCCCCTGCGCCGTCGTCTCCGGTTCGCTACCGTGAATGTTTGAGGAACTACGCCGTGAAGAGCGGCGGGCACGTGCTCGATGGGTGCGGAGAGTTCATGCCCAGTGGGGAAGATGGTACTCCTGATGGGTTCAAGTGCGCCGCCTGCGAATGTCACCGGAGTTTCCACCGGAGAGTAGTGGAGGTGGTGGATAACGGCCGGATTAAGGTCGTGAGTTACGGTAAGAGGACAGAACGGCGGAGTTTCGCTGGTCCGGTGATGATGGCGTTCGGCGGTTCGGCGGAAGGCCCGGCGGAGTCGTCAAGCGACGGCGGAGAAGCGTCGGGGAAGGCAAAGAAGCGGGTGAGGACGCAGTTCAGCTTAGAAGAGAAGGGTAAAATGATGAGCCACTAG

Coding sequence (CDS)

ATGGAATTAGGAGACCATCAAACCGTTCATTATTCCCTTAGACCCAGACGAGATCACCCTCCTCCGAACCCAGATCCGGCGGCGCCACCCCCTGCGCCGTCGTCTCCGGTTCGCTACCGTGAATGTTTGAGGAACTACGCCGTGAAGAGCGGCGGGCACGTGCTCGATGGGTGCGGAGAGTTCATGCCCAGTGGGGAAGATGGTACTCCTGATGGGTTCAAGTGCGCCGCCTGCGAATGTCACCGGAGTTTCCACCGGAGAGTAGTGGAGGTGGTGGATAACGGCCGGATTAAGGTCGTGAGTTACGGTAAGAGGACAGAACGGCGGAGTTTCGCTGGTCCGGTGATGATGGCGTTCGGCGGTTCGGCGGAAGGCCCGGCGGAGTCGTCAAGCGACGGCGGAGAAGCGTCGGGGAAGGCAAAGAAGCGGGTGAGGACGCAGTTCAGCTTAGAAGAGAAGGGTAAAATGATGAGCCACTAG

Protein sequence

MELGDHQTVHYSLRPRRDHPPPNPDPAAPPPAPSSPVRYRECLRNYAVKSGGHVLDGCGEFMPSGEDGTPDGFKCAACECHRSFHRRVVEVVDNGRIKVVSYGKRTERRSFAGPVMMAFGGSAEGPAESSSDGGEASGKAKKRVRTQFSLEEKGKMMSH

Homology

[Close]

BLAST of CmoCh16G006760 vs. ExPASy Swiss-Prot
Match: Q9SB61 (Zinc-finger homeodomain protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZHD1 PE=1 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 4.2e-22
Identity = 57/129 (44.19%), Postives = 76/129 (58.91%), Query Frame = 0


Query: 37  VRYRECLRNYAVKSGGHVLDGCGEFMPSGEDGTPDGFKCAACECHRSFHRRVVEVVDNGR 96
           +RYRECL+N+AV  GGH +DGC EFMPSGEDGT D  KCAAC CHR+FHR+  E +    
Sbjct: 47  IRYRECLKNHAVNIGGHAVDGCCEFMPSGEDGTLDALKCAACGCHRNFHRKETESIGGRA 106

Query: 97  IKVVSYGKRTER-------RSFAGPVMMAFGGSAEGPAESSSDGGEASGKAKKRVRTQFS 156
            +V +Y  R  +            P       +A G  E +S+   +SG   KR RT+F+
Sbjct: 107 HRVPTYYNRPPQPHQPPGYLHLTSPAAPYRPPAASGDEEDTSN-PSSSGGTTKRFRTKFT 166

Query: 157 LEEKGKMMS 159
            E+K KM++
Sbjct: 167 AEQKEKMLA 174

[Close]

BLAST of CmoCh16G006760 vs. ExPASy Swiss-Prot
Match: Q9ZPW7 (Zinc-finger homeodomain protein 6 OS=Arabidopsis thaliana OX=3702 GN=ZHD6 PE=1 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 5.5e-22
Identity = 66/172 (38.37%), Postives = 89/172 (51.74%), Query Frame = 0


Query: 16  RRDHPPPNPDP----------------AAPPPAPSSPVRYRECLRNYAVKSGGHVLDGCG 75
           +R+   P+PDP                A P        RYREC +N+A  SGGHV+DGCG
Sbjct: 43  KRNGSDPDPDPDLDTNPISISHAPRSYARPQTTSPGKARYRECQKNHAASSGGHVVDGCG 102

Query: 76  EFMPSGEDGTPDGFKCAACECHRSFHRRVVEVVDNGRIKVVSYGKRTERRSFAGPVMMAF 135
           EFM SGE+GT +   CAAC+CHRSFHR+ ++ +         + +R        P+MM+F
Sbjct: 103 EFMSSGEEGTVESLLCAACDCHRSFHRKEIDGLFVVNFNSFGHSQRPLGSRHVSPIMMSF 162

Query: 136 GGSAEGPAESSSDG-----GEASG---------KAKKRVRTQFSLEEKGKMM 158
           GG     AESS++         SG         + KKR RT+F+ E+K KMM
Sbjct: 163 GGGGGCAAESSTEDLNKFHQSFSGYGVDQFHHYQPKKRFRTKFNEEQKEKMM 214

[Close]

BLAST of CmoCh16G006760 vs. ExPASy Swiss-Prot
Match: Q9FKP8 (Zinc-finger homeodomain protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZHD1 PE=1 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 2.8e-18
Identity = 56/140 (40.00%), Postives = 79/140 (56.43%), Query Frame = 0


Query: 35  SPVRYRECLRNYAVKSGGHVLDGCGEFMPSGEDGTPDGFKCAACECHRSFHRRVVEVVDN 94
           S  R+RECL+N AV  GGH +DGCGEFMP+G +GT D  KCAAC CHR+FHR+ +    +
Sbjct: 71  SRFRFRECLKNQAVNIGGHAVDGCGEFMPAGIEGTIDALKCAACGCHRNFHRKELPYFHH 130

Query: 95  ------------GRIKVVSYGKRTERRSFAGPVMMAF----GGSAEGPAESSSDGGEASG 154
                       G  ++ +        S A P+ +A        +E P E+SS   EA G
Sbjct: 131 APPQHQPPPPPPGFYRLPAPVSYRPPPSQAPPLQLALPPPQRERSEDPMETSS--AEAGG 190

Query: 155 KAKKRVRTQFSLEEKGKMMS 159
             +KR RT+F+ E+K +M++
Sbjct: 191 GIRKRHRTKFTAEQKERMLA 208

[Close]

BLAST of CmoCh16G006760 vs. ExPASy Swiss-Prot
Match: A2Z259 (Zinc-finger homeodomain protein 1 OS=Oryza sativa subsp. indica OX=39946 GN=ZHD1 PE=3 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.6e-16
Identity = 61/177 (34.46%), Postives = 77/177 (43.50%), Query Frame = 0


Query: 38  RYRECLRNYAVKSGGHVLDGCGEFMPSGEDGTPDGFKCAACECHRSFHRRVVEVVDN--- 97
           RYRECL+N+AV  GGH +DGCGEFM +GE+GT D  +CAAC CHR+FHR+  E +     
Sbjct: 56  RYRECLKNHAVGIGGHAVDGCGEFMAAGEEGTIDALRCAACNCHRNFHRKESESLAGEGS 115

Query: 98  --GRIKVVSYGKRTERR--------------------SFAGPVMMAFGG----------- 157
                 VV YG     +                    + A     A GG           
Sbjct: 116 PFSPAAVVPYGATPHHQFSPYYRTPAGYLHHHQHHMAAAAAAAAAAAGGHPQRPLALPST 175

Query: 158 ------------------SAEGPAESSS--DGGEASGKAKKRVRTQFSLEEKGKMMS 159
                             SA GP    S   G   SG  KKR RT+F+ E+K KM++
Sbjct: 176 SHSGRDDGDDLSGMVGPMSAVGPLSGMSLGAGPSGSGSGKKRFRTKFTQEQKDKMLA 232

[Close]

BLAST of CmoCh16G006760 vs. ExPASy Swiss-Prot
Match: Q6YXH5 (Zinc-finger homeodomain protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=ZHD1 PE=2 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.6e-16
Identity = 61/177 (34.46%), Postives = 77/177 (43.50%), Query Frame = 0


Query: 38  RYRECLRNYAVKSGGHVLDGCGEFMPSGEDGTPDGFKCAACECHRSFHRRVVEVVDN--- 97
           RYRECL+N+AV  GGH +DGCGEFM +GE+GT D  +CAAC CHR+FHR+  E +     
Sbjct: 56  RYRECLKNHAVGIGGHAVDGCGEFMAAGEEGTIDALRCAACNCHRNFHRKESESLAGEGS 115

Query: 98  --GRIKVVSYGKRTERR--------------------SFAGPVMMAFGG----------- 157
                 VV YG     +                    + A     A GG           
Sbjct: 116 PFSPAAVVPYGATPHHQFSPYYRTPAGYLHHHQHHMAAAAAAAAAAAGGYPQRPLALPST 175

Query: 158 ------------------SAEGPAESSS--DGGEASGKAKKRVRTQFSLEEKGKMMS 159
                             SA GP    S   G   SG  KKR RT+F+ E+K KM++
Sbjct: 176 SHSGRDDGDDLSGMVGPMSAVGPLSGMSLGAGPSGSGSGKKRFRTKFTQEQKDKMLA 232

[Close]

BLAST of CmoCh16G006760 vs. ExPASy TrEMBL
Match: A0A6J1ENA6 (zinc-finger homeodomain protein 6-like OS=Cucurbita moschata OX=3662 GN=LOC111435911 PE=4 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 2.5e-86
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 1   MELGDHQTVHYSLRPRRDHPPPNPDPAAPPPAPSSPVRYRECLRNYAVKSGGHVLDGCGE 60
           MELGDHQTVHYSLRPRRDHPPPNPDPAAPPPAPSSPVRYRECLRNYAVKSGGHVLDGCGE
Sbjct: 1   MELGDHQTVHYSLRPRRDHPPPNPDPAAPPPAPSSPVRYRECLRNYAVKSGGHVLDGCGE 60

Query: 61  FMPSGEDGTPDGFKCAACECHRSFHRRVVEVVDNGRIKVVSYGKRTERRSFAGPVMMAFG 120
           FMPSGEDGTPDGFKCAACECHRSFHRRVVEVVDNGRIKVVSYGKRTERRSFAGPVMMAFG
Sbjct: 61  FMPSGEDGTPDGFKCAACECHRSFHRRVVEVVDNGRIKVVSYGKRTERRSFAGPVMMAFG 120

Query: 121 GSAEGPAESSSDGGEASGKAKKRVRTQFSLEEKGKMMSH 160
           GSAEGPAESSSDGGEASGKAKKRVRTQFSLEEKGKMMSH
Sbjct: 121 GSAEGPAESSSDGGEASGKAKKRVRTQFSLEEKGKMMSH 159

[Close]

BLAST of CmoCh16G006760 vs. ExPASy TrEMBL
Match: A0A6J1JAI0 (zinc-finger homeodomain protein 6-like OS=Cucurbita maxima OX=3661 GN=LOC111483213 PE=4 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 2.9e-82
Identity = 154/161 (95.65%), Postives = 156/161 (96.89%), Query Frame = 0


Query: 1   MELGDHQTVHYSLRPRRDHPPPNPDPAAPPPAPSSPVRYRECLRNYAVKSGGHVLDGCGE 60
           ME  DHQT HYSLRPRRDHPPPNPDPAAPPPAPSSPVRYRECLRNYAVKSGGHVLDGCGE
Sbjct: 1   MEFRDHQTAHYSLRPRRDHPPPNPDPAAPPPAPSSPVRYRECLRNYAVKSGGHVLDGCGE 60

Query: 61  FMPSGEDGTPDGFKCAACECHRSFHRRVVEVVD--NGRIKVVSYGKRTERRSFAGPVMMA 120
           FMPSG+DGTPDGFKCAACECHRSFHRRVVEVVD  NGRIKVVSYGKRTERRSFAGPVMMA
Sbjct: 61  FMPSGDDGTPDGFKCAACECHRSFHRRVVEVVDVANGRIKVVSYGKRTERRSFAGPVMMA 120

Query: 121 FGGSAEGPAESSSDGGEASGKAKKRVRTQFSLEEKGKMMSH 160
           FGGSAEGPAESSSDGGEASGKAKKRVRTQFS+EEKGKMMSH
Sbjct: 121 FGGSAEGPAESSSDGGEASGKAKKRVRTQFSVEEKGKMMSH 161

[Close]

BLAST of CmoCh16G006760 vs. ExPASy TrEMBL
Match: A0A0A0KWP2 (ZF-HD dimerization-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G046670 PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 7.0e-44
Identity = 104/177 (58.76%), Postives = 122/177 (68.93%), Query Frame = 0


Query: 6   HQTVHYSLRPRRDHPPPNPDPAAP--PPAP----SSPVRYRECLRNYAVKSGGHVLDGCG 65
           H    YSLRPR D PPP P P  P   PAP    S+P+RY +CL+N+AVK+GGHVLDGCG
Sbjct: 15  HLPFQYSLRPRTDPPPPPPPPPPPNLDPAPASPTSTPLRYSQCLKNHAVKTGGHVLDGCG 74

Query: 66  EFMPSGEDGTPDGFKCAACECHRSFHRRVVE---VVDNGRIKVV---------------S 125
           EFMPSGEDGTPD FKCAACECHRSFHRRV+E   + +N R+ ++               +
Sbjct: 75  EFMPSGEDGTPDSFKCAACECHRSFHRRVLEEEDITNNTRLHILTSAPPQYNTQFSNGNN 134

Query: 126 YGKRTERRSFAGPVMMAFGGSAEGPAESSSDGG-EASGKAKKRVRTQFSLEEKGKMM 158
             K+   R+   P+MM FGGS E PAESSSDGG EASGK KKR RT+FS E+KGKMM
Sbjct: 135 NNKQYPGRTRVAPMMMTFGGSTEAPAESSSDGGAEASGKQKKRCRTKFSGEQKGKMM 191

[Close]

BLAST of CmoCh16G006760 vs. ExPASy TrEMBL
Match: A0A1S3BSZ9 (zinc-finger homeodomain protein 6-like OS=Cucumis melo OX=3656 GN=LOC103493196 PE=4 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 1.3e-42
Identity = 105/176 (59.66%), Postives = 120/176 (68.18%), Query Frame = 0


Query: 6   HQTVHYSL-RPRRDHPPP---NPDPAAPPPAPSSPVRYRECLRNYAVKSGGHVLDGCGEF 65
           H    YSL RPR D PPP   NPDP AP   PS+PVRY +CL+N+AVK+GGHVLDGCGEF
Sbjct: 15  HLPFQYSLRRPRTDPPPPPPLNPDP-APASPPSTPVRYSQCLKNHAVKTGGHVLDGCGEF 74

Query: 66  MPSGEDGTPDGFKCAACECHRSFHRRVVEVVD----NGRIKVV---------------SY 125
           MPSGEDGTPD FKCAACECHRSFHRRV+E  D      R+ ++               + 
Sbjct: 75  MPSGEDGTPDSFKCAACECHRSFHRRVLEEEDVTNNTSRLHILTSAAPPYTSQFNNGNNN 134

Query: 126 GKRTERRSFAGPVMMAFGGSAEGPAESSSDGGEASGK-AKKRVRTQFSLEEKGKMM 158
             +  RR+   PVMM FGGS E PAESSSDG EASG+  KKR RT+FS E+KGKMM
Sbjct: 135 NNQYPRRTRVAPVMMTFGGSTEAPAESSSDGAEASGRQQKKRSRTKFSGEQKGKMM 189

[Close]

BLAST of CmoCh16G006760 vs. ExPASy TrEMBL
Match: A0A5A7TTS2 (Zinc-finger homeodomain protein 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G00860 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 1.7e-42
Identity = 105/177 (59.32%), Postives = 120/177 (67.80%), Query Frame = 0


Query: 6   HQTVHYSL-RPRRDHPPP----NPDPAAPPPAPSSPVRYRECLRNYAVKSGGHVLDGCGE 65
           H    YSL RPR D PPP    NPDP AP   PS+PVRY +CL+N+AVK+GGHVLDGCGE
Sbjct: 15  HLPFQYSLRRPRTDPPPPPPPLNPDP-APASPPSTPVRYSQCLKNHAVKTGGHVLDGCGE 74

Query: 66  FMPSGEDGTPDGFKCAACECHRSFHRRVVEVVD----NGRIKVV---------------S 125
           FMPSGEDGTPD FKCAACECHRSFHRRV+E  D      R+ ++               +
Sbjct: 75  FMPSGEDGTPDSFKCAACECHRSFHRRVLEEEDVTNNTSRLHILTSAAPPYTSQFNNGNN 134

Query: 126 YGKRTERRSFAGPVMMAFGGSAEGPAESSSDGGEASGK-AKKRVRTQFSLEEKGKMM 158
              +  RR+   PVMM FGGS E PAESSSDG EASG+  KKR RT+FS E+KGKMM
Sbjct: 135 NNNQYPRRTRVAPVMMTFGGSTEAPAESSSDGAEASGRQQKKRSRTKFSGEQKGKMM 190

[Close]

BLAST of CmoCh16G006760 vs. NCBI nr
Match: XP_022929279.1 (zinc-finger homeodomain protein 6-like [Cucurbita moschata])

HSP 1 Score: 327.8 bits (839), Expect = 5.2e-86
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 1   MELGDHQTVHYSLRPRRDHPPPNPDPAAPPPAPSSPVRYRECLRNYAVKSGGHVLDGCGE 60
           MELGDHQTVHYSLRPRRDHPPPNPDPAAPPPAPSSPVRYRECLRNYAVKSGGHVLDGCGE
Sbjct: 1   MELGDHQTVHYSLRPRRDHPPPNPDPAAPPPAPSSPVRYRECLRNYAVKSGGHVLDGCGE 60

Query: 61  FMPSGEDGTPDGFKCAACECHRSFHRRVVEVVDNGRIKVVSYGKRTERRSFAGPVMMAFG 120
           FMPSGEDGTPDGFKCAACECHRSFHRRVVEVVDNGRIKVVSYGKRTERRSFAGPVMMAFG
Sbjct: 61  FMPSGEDGTPDGFKCAACECHRSFHRRVVEVVDNGRIKVVSYGKRTERRSFAGPVMMAFG 120

Query: 121 GSAEGPAESSSDGGEASGKAKKRVRTQFSLEEKGKMMSH 160
           GSAEGPAESSSDGGEASGKAKKRVRTQFSLEEKGKMMSH
Sbjct: 121 GSAEGPAESSSDGGEASGKAKKRVRTQFSLEEKGKMMSH 159

[Close]

BLAST of CmoCh16G006760 vs. NCBI nr
Match: KAG6577219.1 (Zinc-finger homeodomain protein 6, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015310.1 Zinc-finger homeodomain protein 6, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 317.0 bits (811), Expect = 9.2e-83
Identity = 154/159 (96.86%), Postives = 155/159 (97.48%), Query Frame = 0


Query: 1   MELGDHQTVHYSLRPRRDHPPPNPDPAAPPPAPSSPVRYRECLRNYAVKSGGHVLDGCGE 60
           MEL DHQTVHYSLRPRRDHPPPNPDPAAPPPAPSSPVRYRECLRNYAVKSGGHVLDGCGE
Sbjct: 1   MELRDHQTVHYSLRPRRDHPPPNPDPAAPPPAPSSPVRYRECLRNYAVKSGGHVLDGCGE 60

Query: 61  FMPSGEDGTPDGFKCAACECHRSFHRRVVEVVDNGRIKVVSYGKRTERRSFAGPVMMAFG 120
           FMPSGEDGTPDGFKCAACECHRSFHRRVVEVVDNGRIKVVSYGKRTERRSF GPVMMAFG
Sbjct: 61  FMPSGEDGTPDGFKCAACECHRSFHRRVVEVVDNGRIKVVSYGKRTERRSFGGPVMMAFG 120

Query: 121 GSAEGPAESSSDGGEASGKAKKRVRTQFSLEEKGKMMSH 160
           GSAEGPAESSSDGGEAS KAKKRVRTQFS+EEKGKMM H
Sbjct: 121 GSAEGPAESSSDGGEASRKAKKRVRTQFSVEEKGKMMRH 159

[Close]

BLAST of CmoCh16G006760 vs. NCBI nr
Match: XP_022985130.1 (zinc-finger homeodomain protein 6-like [Cucurbita maxima])

HSP 1 Score: 314.3 bits (804), Expect = 6.0e-82
Identity = 154/161 (95.65%), Postives = 156/161 (96.89%), Query Frame = 0


Query: 1   MELGDHQTVHYSLRPRRDHPPPNPDPAAPPPAPSSPVRYRECLRNYAVKSGGHVLDGCGE 60
           ME  DHQT HYSLRPRRDHPPPNPDPAAPPPAPSSPVRYRECLRNYAVKSGGHVLDGCGE
Sbjct: 1   MEFRDHQTAHYSLRPRRDHPPPNPDPAAPPPAPSSPVRYRECLRNYAVKSGGHVLDGCGE 60

Query: 61  FMPSGEDGTPDGFKCAACECHRSFHRRVVEVVD--NGRIKVVSYGKRTERRSFAGPVMMA 120
           FMPSG+DGTPDGFKCAACECHRSFHRRVVEVVD  NGRIKVVSYGKRTERRSFAGPVMMA
Sbjct: 61  FMPSGDDGTPDGFKCAACECHRSFHRRVVEVVDVANGRIKVVSYGKRTERRSFAGPVMMA 120

Query: 121 FGGSAEGPAESSSDGGEASGKAKKRVRTQFSLEEKGKMMSH 160
           FGGSAEGPAESSSDGGEASGKAKKRVRTQFS+EEKGKMMSH
Sbjct: 121 FGGSAEGPAESSSDGGEASGKAKKRVRTQFSVEEKGKMMSH 161

[Close]

BLAST of CmoCh16G006760 vs. NCBI nr
Match: XP_023552881.1 (zinc-finger homeodomain protein 6-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 296.6 bits (758), Expect = 1.3e-76
Identity = 150/178 (84.27%), Postives = 151/178 (84.83%), Query Frame = 0


Query: 1   MELGDHQTVHYSLRPRRDHPPPNPDPAAPPPAPSSPVRYRECLRNYAVKSGGHVLDGCGE 60
           MEL DHQT HYSLRPRRDHPPPNPDPAAPPPAPSSPVRYRECLRNYAVKSGGHVLDGCGE
Sbjct: 1   MELRDHQTAHYSLRPRRDHPPPNPDPAAPPPAPSSPVRYRECLRNYAVKSGGHVLDGCGE 60

Query: 61  FMPSGEDGTPDGFKCAACECHRSFHRRVVEVVDNGRIKVVSYG----------------- 120
           FMPSGEDGT DGFKCAACECHRSFHRRVVEVVDNGRIKVVSYG                 
Sbjct: 61  FMPSGEDGTADGFKCAACECHRSFHRRVVEVVDNGRIKVVSYGMFNYYYYYYYYYILRSN 120

Query: 121 --KRTERRSFAGPVMMAFGGSAEGPAESSSDGGEASGKAKKRVRTQFSLEEKGKMMSH 160
             K   RRSFAGPVMMAFGGSAEGPAESSSDGGEASGKAKKRVRTQF +EEKGKMM H
Sbjct: 121 NEKENYRRSFAGPVMMAFGGSAEGPAESSSDGGEASGKAKKRVRTQFIVEEKGKMMRH 178

[Close]

BLAST of CmoCh16G006760 vs. NCBI nr
Match: XP_038907118.1 (zinc-finger homeodomain protein 10-like [Benincasa hispida])

HSP 1 Score: 206.5 bits (524), Expect = 1.8e-49
Identity = 109/167 (65.27%), Postives = 122/167 (73.05%), Query Frame = 0


Query: 6   HQTVHYSLRPRRDHPPPNPDPAAPPPAPSSPVRYRECLRNYAVKSGGHVLDGCGEFMPSG 65
           H    YSLRP  DHPP NPDPAA  P+PSSPV YR+CL+N+AVK+GGHVLDGCGEFMPSG
Sbjct: 16  HLPFQYSLRPTTDHPPLNPDPAA--PSPSSPVWYRQCLKNHAVKTGGHVLDGCGEFMPSG 75

Query: 66  EDGTPDGFKCAACECHRSFHRRVVEVVD--NGRIKVVSYGKRTERRSFAG---------- 125
           E+GTPD FKCAACECHRSFHRRV+E  D  NGR+ +++YG       F G          
Sbjct: 76  EEGTPDSFKCAACECHRSFHRRVLEEEDITNGRLNLLTYGPPPYNFHFNGNNNNQCTPWS 135

Query: 126 ---PVMMAFGGSAEGPAESSSDGGEASGKAKKRVRTQFSLEEKGKMM 158
              P MM FGGSAE PAESSSDG EASGK KKR RT+FS E+K KMM
Sbjct: 136 RVAPAMMTFGGSAEAPAESSSDGAEASGKRKKRFRTKFSGEQKAKMM 180

[Close]

BLAST of CmoCh16G006760 vs. TAIR 10
Match: AT4G24660.1 (homeobox protein 22 )

HSP 1 Score: 105.9 bits (263), Expect = 3.0e-23
Identity = 57/129 (44.19%), Postives = 76/129 (58.91%), Query Frame = 0


Query: 37  VRYRECLRNYAVKSGGHVLDGCGEFMPSGEDGTPDGFKCAACECHRSFHRRVVEVVDNGR 96
           +RYRECL+N+AV  GGH +DGC EFMPSGEDGT D  KCAAC CHR+FHR+  E +    
Sbjct: 47  IRYRECLKNHAVNIGGHAVDGCCEFMPSGEDGTLDALKCAACGCHRNFHRKETESIGGRA 106

Query: 97  IKVVSYGKRTER-------RSFAGPVMMAFGGSAEGPAESSSDGGEASGKAKKRVRTQFS 156
            +V +Y  R  +            P       +A G  E +S+   +SG   KR RT+F+
Sbjct: 107 HRVPTYYNRPPQPHQPPGYLHLTSPAAPYRPPAASGDEEDTSN-PSSSGGTTKRFRTKFT 166

Query: 157 LEEKGKMMS 159
            E+K KM++
Sbjct: 167 AEQKEKMLA 174

[Close]

BLAST of CmoCh16G006760 vs. TAIR 10
Match: AT2G18350.1 (homeobox protein 24 )

HSP 1 Score: 105.5 bits (262), Expect = 3.9e-23
Identity = 66/172 (38.37%), Postives = 89/172 (51.74%), Query Frame = 0


Query: 16  RRDHPPPNPDP----------------AAPPPAPSSPVRYRECLRNYAVKSGGHVLDGCG 75
           +R+   P+PDP                A P        RYREC +N+A  SGGHV+DGCG
Sbjct: 43  KRNGSDPDPDPDLDTNPISISHAPRSYARPQTTSPGKARYRECQKNHAASSGGHVVDGCG 102

Query: 76  EFMPSGEDGTPDGFKCAACECHRSFHRRVVEVVDNGRIKVVSYGKRTERRSFAGPVMMAF 135
           EFM SGE+GT +   CAAC+CHRSFHR+ ++ +         + +R        P+MM+F
Sbjct: 103 EFMSSGEEGTVESLLCAACDCHRSFHRKEIDGLFVVNFNSFGHSQRPLGSRHVSPIMMSF 162

Query: 136 GGSAEGPAESSSDG-----GEASG---------KAKKRVRTQFSLEEKGKMM 158
           GG     AESS++         SG         + KKR RT+F+ E+K KMM
Sbjct: 163 GGGGGCAAESSTEDLNKFHQSFSGYGVDQFHHYQPKKRFRTKFNEEQKEKMM 214

[Close]

BLAST of CmoCh16G006760 vs. TAIR 10
Match: AT5G65410.1 (homeobox protein 25 )

HSP 1 Score: 93.2 bits (230), Expect = 2.0e-19
Identity = 56/140 (40.00%), Postives = 79/140 (56.43%), Query Frame = 0


Query: 35  SPVRYRECLRNYAVKSGGHVLDGCGEFMPSGEDGTPDGFKCAACECHRSFHRRVVEVVDN 94
           S  R+RECL+N AV  GGH +DGCGEFMP+G +GT D  KCAAC CHR+FHR+ +    +
Sbjct: 71  SRFRFRECLKNQAVNIGGHAVDGCGEFMPAGIEGTIDALKCAACGCHRNFHRKELPYFHH 130

Query: 95  ------------GRIKVVSYGKRTERRSFAGPVMMAF----GGSAEGPAESSSDGGEASG 154
                       G  ++ +        S A P+ +A        +E P E+SS   EA G
Sbjct: 131 APPQHQPPPPPPGFYRLPAPVSYRPPPSQAPPLQLALPPPQRERSEDPMETSS--AEAGG 190

Query: 155 KAKKRVRTQFSLEEKGKMMS 159
             +KR RT+F+ E+K +M++
Sbjct: 191 GIRKRHRTKFTAEQKERMLA 208

[Close]

BLAST of CmoCh16G006760 vs. TAIR 10
Match: AT1G75240.1 (homeobox protein 33 )

HSP 1 Score: 86.3 bits (212), Expect = 2.5e-17
Identity = 66/203 (32.51%), Postives = 89/203 (43.84%), Query Frame = 0


Query: 19  HPPPNPDPAAPPPAPSSPVRYRECLRNYAVKSGGHVLDGCGEFMPSGEDGTPDGFKCAAC 78
           H   +P   +   A    VRYRECL+N+A   GG V DGCGEFMPSGE+GT +  +CAAC
Sbjct: 56  HQSKSPSSFSISAAAKPTVRYRECLKNHAASVGGSVHDGCGEFMPSGEEGTIEALRCAAC 115

Query: 79  ECHRSFHRRVVEVVDNGRIKVVS-----------YGKRTERR------------------ 138
           +CHR+FHR+ ++ V  G   ++S           YG    RR                  
Sbjct: 116 DCHRNFHRKEMDGV--GSSDLISHHRHHHYHHNQYGGGGGRRPPPPNMMLNPLMLPPPPN 175

Query: 139 -----------------SFAGPVMMAFGGSAEGPAESSSD-------GGEASGKA----- 158
                                P+ +A+GG   G   SS D        GE +G A     
Sbjct: 176 YQPIHHHKYGMSPPGGGGMVTPMSVAYGGGGGGAESSSEDLNLYGQSSGEGAGAAAGQMA 235

[Close]

BLAST of CmoCh16G006760 vs. TAIR 10
Match: AT2G02540.1 (homeobox protein 21 )

HSP 1 Score: 82.4 bits (202), Expect = 3.6e-16
Identity = 48/155 (30.97%), Postives = 74/155 (47.74%), Query Frame = 0


Query: 37  VRYRECLRNYAVKSGGHVLDGCGEFMPSGEDGTPDGFKCAACECHRSFHRRVVEVVDN-- 96
           ++Y+ECL+N+A   GG+ +DGCGEFMPSGE+G+ +   C+ C CHR+FHRR  E  +   
Sbjct: 85  IKYKECLKNHAATMGGNAIDGCGEFMPSGEEGSIEALTCSVCNCHRNFHRRETEGEEKTF 144

Query: 97  -----------GRIKVVSYGKRTERRSFAGPVMMAFGGSAEGPAESSSDGGEASG----- 156
                       + + + +  +  +      ++M  G +  G    S D  E  G     
Sbjct: 145 FSPYLNHHQPPPQQRKLMFHHKMIKSPLPQQMIMPIGVTTAGSNSESEDLMEEEGGGSLT 204

Query: 157 ---------------KAKKRVRTQFSLEEKGKMMS 159
                            KKR RT+F+ E+K KM+S
Sbjct: 205 FRQPPPPPSPYSYGHNQKKRFRTKFTQEQKEKMIS 239

The following BLAST results are available for this feature:

BLAST of CmoCh16G006760 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SB61	4.2e-22	44.19	Zinc-finger homeodomain protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZHD1 PE=1 S...	[more]
Q9ZPW7	5.5e-22	38.37	Zinc-finger homeodomain protein 6 OS=Arabidopsis thaliana OX=3702 GN=ZHD6 PE=1 S...	[more]
Q9FKP8	2.8e-18	40.00	Zinc-finger homeodomain protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZHD1 PE=1 S...	[more]
A2Z259	1.6e-16	34.46	Zinc-finger homeodomain protein 1 OS=Oryza sativa subsp. indica OX=39946 GN=ZHD1...	[more]
Q6YXH5	1.6e-16	34.46	Zinc-finger homeodomain protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=ZH...	[more]

BLAST of CmoCh16G006760 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ENA6	2.5e-86	100.00	zinc-finger homeodomain protein 6-like OS=Cucurbita moschata OX=3662 GN=LOC11143...	[more]
A0A6J1JAI0	2.9e-82	95.65	zinc-finger homeodomain protein 6-like OS=Cucurbita maxima OX=3661 GN=LOC1114832...	[more]
A0A0A0KWP2	7.0e-44	58.76	ZF-HD dimerization-type domain-containing protein OS=Cucumis sativus OX=3659 GN=...	[more]
A0A1S3BSZ9	1.3e-42	59.66	zinc-finger homeodomain protein 6-like OS=Cucumis melo OX=3656 GN=LOC103493196 P...	[more]
A0A5A7TTS2	1.7e-42	59.32	Zinc-finger homeodomain protein 6-like OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]

BLAST of CmoCh16G006760 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022929279.1	5.2e-86	100.00	zinc-finger homeodomain protein 6-like [Cucurbita moschata]	[more]
KAG6577219.1	9.2e-83	96.86	Zinc-finger homeodomain protein 6, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022985130.1	6.0e-82	95.65	zinc-finger homeodomain protein 6-like [Cucurbita maxima]	[more]
XP_023552881.1	1.3e-76	84.27	zinc-finger homeodomain protein 6-like [Cucurbita pepo subsp. pepo]	[more]
XP_038907118.1	1.8e-49	65.27	zinc-finger homeodomain protein 10-like [Benincasa hispida]	[more]

BLAST of CmoCh16G006760 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G24660.1	3.0e-23	44.19	homeobox protein 22	[more]
AT2G18350.1	3.9e-23	38.37	homeobox protein 24	[more]
AT5G65410.1	2.0e-19	40.00	homeobox protein 25	[more]
AT1G75240.1	2.5e-17	32.51	homeobox protein 33	[more]
AT2G02540.1	3.6e-16	30.97	homeobox protein 21	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain	PFAM	PF04770	ZF-HD_dimer	coord: 37..89 e-value: 9.5E-29 score: 99.5
IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain	TIGRFAM	TIGR01566	TIGR01566	coord: 38..87 e-value: 1.2E-26 score: 90.9
IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain	PROSITE	PS51523	ZF_HD_DIMER	coord: 39..88 score: 24.694511
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 122..159
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 135..159
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..36
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 22..36
None	No IPR available	PANTHER	PTHR31948:SF60	ZINC-FINGER HOMEODOMAIN PROTEIN 5	coord: 33..158
None	No IPR available	PANTHER	PTHR31948	ZINC-FINGER HOMEODOMAIN PROTEIN 2	coord: 33..158

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh16G006760.1	CmoCh16G006760.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003677	DNA binding