CmoCh16G006660 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh16G006660
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Reverse transcriptase
Location	Cmo_Chr16: 3314882 .. 3316003 (+)
RNA-Seq Expression	CmoCh16G006660
Synteny	CmoCh16G006660

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGCTTAAGAGGAGAGGAGCCTATCTCAGACTTGGTCCTAGGAGGGGCAGGAGAAGGGTCGAAGAGGACCCAACTATTCCTATCCCCGAGGTGGAGCAGCGCCCACCCCTGGAGGAAACCAGAGAGCTAACCTCAGATGAGGAACAGGCGCCGCCACAGACACCCACACCGAGGAGAGGCCGAAGAAAGACCGAGCTTCGGGCTATTCAAGAGACTGTTCCTCAGGACCCGGCGCCTAGAGGGACTCCACCAGCGCCAGCACTGATTCCTGAGGAGGTGCCTGCCCAGCCGTCAACGACCTTTACACGGGATGTGTTACAAGTATTCATGAGAACCTCTATGGAAAATCAGGCACAATTGACTCAGTTAATGCAGACACTAGTGGCCAATCAGGCTGCAATGCAGGGAACGAGAGATATGGGGATGACGGTAGAGTCTTGTTATTTTAGGGATTTTCAGTGGTATAACCCGACTTCTTTTAATGGAGACAAGGTGGACCATGCTGCAGCTGAGACCTGGTTGGAGGCTATAGAGGCGATCTTTCTATACATGAACTGTCCACCAGAATATCAAGTCCACTGTGGGACTTACATGCTGAAGGGCGAAGCCCATTTTTGGTGGAAAGGCGCCCGAAAAACTATTACTCCAGTGGGAGGTTATATTTCTTGGAATCAGTTCAAAGAAGCCTATTTGTGTAAATATTACCCAACGGTTGCCCGACTCAAGTGTCAGACAACATTCCTAAAATTGAAATAGGGGAACAAATCTATCGAGGAATATGATCTCGAGTTTAATAGGCTGACGAGGTTTTGCCCCGAGTATGTCGGCAATGACAAGATGAAGACTGATCGCTTCATCGCCGGTCTCTGGATAGAGATTCAGGGTCTAGTAGTGGCACAGATATCCTCGGCTTCTTCTGGCTTGTGGTCACAAAATTATACCTTTTTCCAGCTGTTTTTGTTTGATTGCATGACTTCTATAATACAGATAAACCAAATTTCAGAACTTCTGCTGAATCCTGTACTAAAGATGGCACTATTGCTAGTAAATGTTTTTTCTTTTCACTTTATGACTTCATCTAGAGCTCCCTTAAACAAGTGGAATTTGCTGCCCTCCTGA

mRNA sequence

ATGGCGCTTAAGAGGAGAGGAGCCTATCTCAGACTTGGTCCTAGGAGGGGCAGGAGAAGGGTCGAAGAGGACCCAACTATTCCTATCCCCGAGGTGGAGCAGCGCCCACCCCTGGAGGAAACCAGAGAGCTAACCTCAGATGAGGAACAGGCGCCGCCACAGACACCCACACCGAGGAGAGGCCGAAGAAAGACCGAGCTTCGGGCTATTCAAGAGACTGTTCCTCAGGACCCGGCGCCTAGAGGGACTCCACCAGCGCCAGCACTGATTCCTGAGGAGGTGCCTGCCCAGCCGTCAACGACCTTTACACGGGATGTGTTACAAGTATTCATGAGAACCTCTATGGAAAATCAGGCACAATTGACTCAGTTAATGCAGACACTAGTGGCCAATCAGGCTGCAATGCAGGGAACGAGAGATATGGGGATGACGGTAGAGTCTTGTTATTTTAGGGATTTTCAGTGGTATAACCCGACTTCTTTTAATGGAGACAAGGTGGACCATGCTGCAGCTGAGACCTGGTTGGAGGCTATAGAGGCGATCTTTCTATACATGAACTGTCCACCAGAATATCAAGTCCACTGTGGGACTTACATGCTGAAGGGCGAAGCCCATTTTTGGTGGAAAGGCGCCCGAAAAACTATTACTCCAGGGAACAAATCTATCGAGGAATATGATCTCGAGTTTAATAGGCTGACGAGGTTTTGCCCCGAGTATGTCGGCAATGACAAGATGAAGACTGATCGCTTCATCGCCGGTCTCTGGATAGAGATTCAGGGTCTAGTAGTGGCACAGATATCCTCGGCTTCTTCTGGCTTGTGGTCACAAAATTATACCTTTTTCCAGCTGTTTTTGTTTGATTGCATGACTTCTATAATACAGATAAACCAAATTTCAGAACTTCTGCTGAATCCTGTACTAAAGATGGCACTATTGCTAGTAAATGTTTTTTCTTTTCACTTTATGACTTCATCTAGAGCTCCCTTAAACAAGTGGAATTTGCTGCCCTCCTGA

Coding sequence (CDS)

ATGGCGCTTAAGAGGAGAGGAGCCTATCTCAGACTTGGTCCTAGGAGGGGCAGGAGAAGGGTCGAAGAGGACCCAACTATTCCTATCCCCGAGGTGGAGCAGCGCCCACCCCTGGAGGAAACCAGAGAGCTAACCTCAGATGAGGAACAGGCGCCGCCACAGACACCCACACCGAGGAGAGGCCGAAGAAAGACCGAGCTTCGGGCTATTCAAGAGACTGTTCCTCAGGACCCGGCGCCTAGAGGGACTCCACCAGCGCCAGCACTGATTCCTGAGGAGGTGCCTGCCCAGCCGTCAACGACCTTTACACGGGATGTGTTACAAGTATTCATGAGAACCTCTATGGAAAATCAGGCACAATTGACTCAGTTAATGCAGACACTAGTGGCCAATCAGGCTGCAATGCAGGGAACGAGAGATATGGGGATGACGGTAGAGTCTTGTTATTTTAGGGATTTTCAGTGGTATAACCCGACTTCTTTTAATGGAGACAAGGTGGACCATGCTGCAGCTGAGACCTGGTTGGAGGCTATAGAGGCGATCTTTCTATACATGAACTGTCCACCAGAATATCAAGTCCACTGTGGGACTTACATGCTGAAGGGCGAAGCCCATTTTTGGTGGAAAGGCGCCCGAAAAACTATTACTCCAGGGAACAAATCTATCGAGGAATATGATCTCGAGTTTAATAGGCTGACGAGGTTTTGCCCCGAGTATGTCGGCAATGACAAGATGAAGACTGATCGCTTCATCGCCGGTCTCTGGATAGAGATTCAGGGTCTAGTAGTGGCACAGATATCCTCGGCTTCTTCTGGCTTGTGGTCACAAAATTATACCTTTTTCCAGCTGTTTTTGTTTGATTGCATGACTTCTATAATACAGATAAACCAAATTTCAGAACTTCTGCTGAATCCTGTACTAAAGATGGCACTATTGCTAGTAAATGTTTTTTCTTTTCACTTTATGACTTCATCTAGAGCTCCCTTAAACAAGTGGAATTTGCTGCCCTCCTGA

Protein sequence

MALKRRGAYLRLGPRRGRRRVEEDPTIPIPEVEQRPPLEETRELTSDEEQAPPQTPTPRRGRRKTELRAIQETVPQDPAPRGTPPAPALIPEEVPAQPSTTFTRDVLQVFMRTSMENQAQLTQLMQTLVANQAAMQGTRDMGMTVESCYFRDFQWYNPTSFNGDKVDHAAAETWLEAIEAIFLYMNCPPEYQVHCGTYMLKGEAHFWWKGARKTITPGNKSIEEYDLEFNRLTRFCPEYVGNDKMKTDRFIAGLWIEIQGLVVAQISSASSGLWSQNYTFFQLFLFDCMTSIIQINQISELLLNPVLKMALLLVNVFSFHFMTSSRAPLNKWNLLPS

Homology

[Close]

BLAST of CmoCh16G006660 vs. ExPASy TrEMBL
Match: A0A6J1ENE9 (uncharacterized protein LOC111435938 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111435938 PE=4 SV=1)

HSP 1 Score: 437.2 bits (1123), Expect = 6.3e-119
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MALKRRGAYLRLGPRRGRRRVEEDPTIPIPEVEQRPPLEETRELTSDEEQAPPQTPTPRR 60
           MALKRRGAYLRLGPRRGRRRVEEDPTIPIPEVEQRPPLEETRELTSDEEQAPPQTPTPRR
Sbjct: 58  MALKRRGAYLRLGPRRGRRRVEEDPTIPIPEVEQRPPLEETRELTSDEEQAPPQTPTPRR 117

Query: 61  GRRKTELRAIQETVPQDPAPRGTPPAPALIPEEVPAQPSTTFTRDVLQVFMRTSMENQAQ 120
           GRRKTELRAIQETVPQDPAPRGTPPAPALIPEEVPAQPSTTFTRDVLQVFMRTSMENQAQ
Sbjct: 118 GRRKTELRAIQETVPQDPAPRGTPPAPALIPEEVPAQPSTTFTRDVLQVFMRTSMENQAQ 177

Query: 121 LTQLMQTLVANQAAMQGTRDMGMTVESCYFRDFQWYNPTSFNGDKVDHAAAETWLEAIEA 180
           LTQLMQTLVANQAAMQGTRDMGMTVESCYFRDFQWYNPTSFNGDKVDHAAAETWLEAIEA
Sbjct: 178 LTQLMQTLVANQAAMQGTRDMGMTVESCYFRDFQWYNPTSFNGDKVDHAAAETWLEAIEA 237

Query: 181 IFLYMNCPPEYQVHCGTYMLKGEAHFWWKGARKTITP 218
           IFLYMNCPPEYQVHCGTYMLKGEAHFWWKGARKTITP
Sbjct: 238 IFLYMNCPPEYQVHCGTYMLKGEAHFWWKGARKTITP 274

[Close]

BLAST of CmoCh16G006660 vs. ExPASy TrEMBL
Match: A0A6J1ENF3 (uncharacterized protein LOC111435938 isoform X6 OS=Cucurbita moschata OX=3662 GN=LOC111435938 PE=4 SV=1)

HSP 1 Score: 437.2 bits (1123), Expect = 6.3e-119
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MALKRRGAYLRLGPRRGRRRVEEDPTIPIPEVEQRPPLEETRELTSDEEQAPPQTPTPRR 60
           MALKRRGAYLRLGPRRGRRRVEEDPTIPIPEVEQRPPLEETRELTSDEEQAPPQTPTPRR
Sbjct: 8   MALKRRGAYLRLGPRRGRRRVEEDPTIPIPEVEQRPPLEETRELTSDEEQAPPQTPTPRR 67

Query: 61  GRRKTELRAIQETVPQDPAPRGTPPAPALIPEEVPAQPSTTFTRDVLQVFMRTSMENQAQ 120
           GRRKTELRAIQETVPQDPAPRGTPPAPALIPEEVPAQPSTTFTRDVLQVFMRTSMENQAQ
Sbjct: 68  GRRKTELRAIQETVPQDPAPRGTPPAPALIPEEVPAQPSTTFTRDVLQVFMRTSMENQAQ 127

Query: 121 LTQLMQTLVANQAAMQGTRDMGMTVESCYFRDFQWYNPTSFNGDKVDHAAAETWLEAIEA 180
           LTQLMQTLVANQAAMQGTRDMGMTVESCYFRDFQWYNPTSFNGDKVDHAAAETWLEAIEA
Sbjct: 128 LTQLMQTLVANQAAMQGTRDMGMTVESCYFRDFQWYNPTSFNGDKVDHAAAETWLEAIEA 187

Query: 181 IFLYMNCPPEYQVHCGTYMLKGEAHFWWKGARKTITP 218
           IFLYMNCPPEYQVHCGTYMLKGEAHFWWKGARKTITP
Sbjct: 188 IFLYMNCPPEYQVHCGTYMLKGEAHFWWKGARKTITP 224

[Close]

BLAST of CmoCh16G006660 vs. ExPASy TrEMBL
Match: A0A6J1EMU0 (uncharacterized protein LOC111435938 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111435938 PE=4 SV=1)

HSP 1 Score: 437.2 bits (1123), Expect = 6.3e-119
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MALKRRGAYLRLGPRRGRRRVEEDPTIPIPEVEQRPPLEETRELTSDEEQAPPQTPTPRR 60
           MALKRRGAYLRLGPRRGRRRVEEDPTIPIPEVEQRPPLEETRELTSDEEQAPPQTPTPRR
Sbjct: 41  MALKRRGAYLRLGPRRGRRRVEEDPTIPIPEVEQRPPLEETRELTSDEEQAPPQTPTPRR 100

Query: 61  GRRKTELRAIQETVPQDPAPRGTPPAPALIPEEVPAQPSTTFTRDVLQVFMRTSMENQAQ 120
           GRRKTELRAIQETVPQDPAPRGTPPAPALIPEEVPAQPSTTFTRDVLQVFMRTSMENQAQ
Sbjct: 101 GRRKTELRAIQETVPQDPAPRGTPPAPALIPEEVPAQPSTTFTRDVLQVFMRTSMENQAQ 160

Query: 121 LTQLMQTLVANQAAMQGTRDMGMTVESCYFRDFQWYNPTSFNGDKVDHAAAETWLEAIEA 180
           LTQLMQTLVANQAAMQGTRDMGMTVESCYFRDFQWYNPTSFNGDKVDHAAAETWLEAIEA
Sbjct: 161 LTQLMQTLVANQAAMQGTRDMGMTVESCYFRDFQWYNPTSFNGDKVDHAAAETWLEAIEA 220

Query: 181 IFLYMNCPPEYQVHCGTYMLKGEAHFWWKGARKTITP 218
           IFLYMNCPPEYQVHCGTYMLKGEAHFWWKGARKTITP
Sbjct: 221 IFLYMNCPPEYQVHCGTYMLKGEAHFWWKGARKTITP 257

[Close]

BLAST of CmoCh16G006660 vs. ExPASy TrEMBL
Match: A0A6J1EMH7 (uncharacterized protein LOC111435938 isoform X7 OS=Cucurbita moschata OX=3662 GN=LOC111435938 PE=4 SV=1)

HSP 1 Score: 437.2 bits (1123), Expect = 6.3e-119
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MALKRRGAYLRLGPRRGRRRVEEDPTIPIPEVEQRPPLEETRELTSDEEQAPPQTPTPRR 60
           MALKRRGAYLRLGPRRGRRRVEEDPTIPIPEVEQRPPLEETRELTSDEEQAPPQTPTPRR
Sbjct: 5   MALKRRGAYLRLGPRRGRRRVEEDPTIPIPEVEQRPPLEETRELTSDEEQAPPQTPTPRR 64

Query: 61  GRRKTELRAIQETVPQDPAPRGTPPAPALIPEEVPAQPSTTFTRDVLQVFMRTSMENQAQ 120
           GRRKTELRAIQETVPQDPAPRGTPPAPALIPEEVPAQPSTTFTRDVLQVFMRTSMENQAQ
Sbjct: 65  GRRKTELRAIQETVPQDPAPRGTPPAPALIPEEVPAQPSTTFTRDVLQVFMRTSMENQAQ 124

Query: 121 LTQLMQTLVANQAAMQGTRDMGMTVESCYFRDFQWYNPTSFNGDKVDHAAAETWLEAIEA 180
           LTQLMQTLVANQAAMQGTRDMGMTVESCYFRDFQWYNPTSFNGDKVDHAAAETWLEAIEA
Sbjct: 125 LTQLMQTLVANQAAMQGTRDMGMTVESCYFRDFQWYNPTSFNGDKVDHAAAETWLEAIEA 184

Query: 181 IFLYMNCPPEYQVHCGTYMLKGEAHFWWKGARKTITP 218
           IFLYMNCPPEYQVHCGTYMLKGEAHFWWKGARKTITP
Sbjct: 185 IFLYMNCPPEYQVHCGTYMLKGEAHFWWKGARKTITP 221

[Close]

BLAST of CmoCh16G006660 vs. ExPASy TrEMBL
Match: A0A6J1EU38 (uncharacterized protein LOC111435938 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111435938 PE=4 SV=1)

HSP 1 Score: 400.6 bits (1028), Expect = 6.5e-108
Identity = 202/217 (93.09%), Postives = 202/217 (93.09%), Query Frame = 0


Query: 1   MALKRRGAYLRLGPRRGRRRVEEDPTIPIPEVEQRPPLEETRELTSDEEQAPPQTPTPRR 60
           MALKRRGAYLRLGPRRGRRRVEEDPTIPIPEVEQRPPLEETRELTSDEEQAPPQTPTPRR
Sbjct: 58  MALKRRGAYLRLGPRRGRRRVEEDPTIPIPEVEQRPPLEETRELTSDEEQAPPQTPTPRR 117

Query: 61  GRRKTELRAIQETVPQDPAPRGTPPAPALIPEEVPAQPSTTFTRDVLQVFMRTSMENQAQ 120
           GRRKTELRAIQETVPQDPAPRGTPPAPALIPEEVPAQPSTTFTRDVL             
Sbjct: 118 GRRKTELRAIQETVPQDPAPRGTPPAPALIPEEVPAQPSTTFTRDVL------------- 177

Query: 121 LTQLMQTLVANQAAMQGTRDMGMTVESCYFRDFQWYNPTSFNGDKVDHAAAETWLEAIEA 180
             QLMQTLVANQAAMQGTRDMGMTVESCYFRDFQWYNPTSFNGDKVDHAAAETWLEAIEA
Sbjct: 178 --QLMQTLVANQAAMQGTRDMGMTVESCYFRDFQWYNPTSFNGDKVDHAAAETWLEAIEA 237

Query: 181 IFLYMNCPPEYQVHCGTYMLKGEAHFWWKGARKTITP 218
           IFLYMNCPPEYQVHCGTYMLKGEAHFWWKGARKTITP
Sbjct: 238 IFLYMNCPPEYQVHCGTYMLKGEAHFWWKGARKTITP 259

[Close]

BLAST of CmoCh16G006660 vs. NCBI nr
Match: XP_022929332.1 (uncharacterized protein LOC111435938 isoform X7 [Cucurbita moschata])

HSP 1 Score: 437.2 bits (1123), Expect = 1.3e-118
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MALKRRGAYLRLGPRRGRRRVEEDPTIPIPEVEQRPPLEETRELTSDEEQAPPQTPTPRR 60
           MALKRRGAYLRLGPRRGRRRVEEDPTIPIPEVEQRPPLEETRELTSDEEQAPPQTPTPRR
Sbjct: 5   MALKRRGAYLRLGPRRGRRRVEEDPTIPIPEVEQRPPLEETRELTSDEEQAPPQTPTPRR 64

Query: 61  GRRKTELRAIQETVPQDPAPRGTPPAPALIPEEVPAQPSTTFTRDVLQVFMRTSMENQAQ 120
           GRRKTELRAIQETVPQDPAPRGTPPAPALIPEEVPAQPSTTFTRDVLQVFMRTSMENQAQ
Sbjct: 65  GRRKTELRAIQETVPQDPAPRGTPPAPALIPEEVPAQPSTTFTRDVLQVFMRTSMENQAQ 124

Query: 121 LTQLMQTLVANQAAMQGTRDMGMTVESCYFRDFQWYNPTSFNGDKVDHAAAETWLEAIEA 180
           LTQLMQTLVANQAAMQGTRDMGMTVESCYFRDFQWYNPTSFNGDKVDHAAAETWLEAIEA
Sbjct: 125 LTQLMQTLVANQAAMQGTRDMGMTVESCYFRDFQWYNPTSFNGDKVDHAAAETWLEAIEA 184

Query: 181 IFLYMNCPPEYQVHCGTYMLKGEAHFWWKGARKTITP 218
           IFLYMNCPPEYQVHCGTYMLKGEAHFWWKGARKTITP
Sbjct: 185 IFLYMNCPPEYQVHCGTYMLKGEAHFWWKGARKTITP 221

[Close]

BLAST of CmoCh16G006660 vs. NCBI nr
Match: XP_022929323.1 (uncharacterized protein LOC111435938 isoform X1 [Cucurbita moschata] >XP_022929324.1 uncharacterized protein LOC111435938 isoform X1 [Cucurbita moschata])

HSP 1 Score: 437.2 bits (1123), Expect = 1.3e-118
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MALKRRGAYLRLGPRRGRRRVEEDPTIPIPEVEQRPPLEETRELTSDEEQAPPQTPTPRR 60
           MALKRRGAYLRLGPRRGRRRVEEDPTIPIPEVEQRPPLEETRELTSDEEQAPPQTPTPRR
Sbjct: 58  MALKRRGAYLRLGPRRGRRRVEEDPTIPIPEVEQRPPLEETRELTSDEEQAPPQTPTPRR 117

Query: 61  GRRKTELRAIQETVPQDPAPRGTPPAPALIPEEVPAQPSTTFTRDVLQVFMRTSMENQAQ 120
           GRRKTELRAIQETVPQDPAPRGTPPAPALIPEEVPAQPSTTFTRDVLQVFMRTSMENQAQ
Sbjct: 118 GRRKTELRAIQETVPQDPAPRGTPPAPALIPEEVPAQPSTTFTRDVLQVFMRTSMENQAQ 177

Query: 121 LTQLMQTLVANQAAMQGTRDMGMTVESCYFRDFQWYNPTSFNGDKVDHAAAETWLEAIEA 180
           LTQLMQTLVANQAAMQGTRDMGMTVESCYFRDFQWYNPTSFNGDKVDHAAAETWLEAIEA
Sbjct: 178 LTQLMQTLVANQAAMQGTRDMGMTVESCYFRDFQWYNPTSFNGDKVDHAAAETWLEAIEA 237

Query: 181 IFLYMNCPPEYQVHCGTYMLKGEAHFWWKGARKTITP 218
           IFLYMNCPPEYQVHCGTYMLKGEAHFWWKGARKTITP
Sbjct: 238 IFLYMNCPPEYQVHCGTYMLKGEAHFWWKGARKTITP 274

[Close]

BLAST of CmoCh16G006660 vs. NCBI nr
Match: XP_022929326.1 (uncharacterized protein LOC111435938 isoform X3 [Cucurbita moschata])

HSP 1 Score: 437.2 bits (1123), Expect = 1.3e-118
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MALKRRGAYLRLGPRRGRRRVEEDPTIPIPEVEQRPPLEETRELTSDEEQAPPQTPTPRR 60
           MALKRRGAYLRLGPRRGRRRVEEDPTIPIPEVEQRPPLEETRELTSDEEQAPPQTPTPRR
Sbjct: 41  MALKRRGAYLRLGPRRGRRRVEEDPTIPIPEVEQRPPLEETRELTSDEEQAPPQTPTPRR 100

Query: 61  GRRKTELRAIQETVPQDPAPRGTPPAPALIPEEVPAQPSTTFTRDVLQVFMRTSMENQAQ 120
           GRRKTELRAIQETVPQDPAPRGTPPAPALIPEEVPAQPSTTFTRDVLQVFMRTSMENQAQ
Sbjct: 101 GRRKTELRAIQETVPQDPAPRGTPPAPALIPEEVPAQPSTTFTRDVLQVFMRTSMENQAQ 160

Query: 121 LTQLMQTLVANQAAMQGTRDMGMTVESCYFRDFQWYNPTSFNGDKVDHAAAETWLEAIEA 180
           LTQLMQTLVANQAAMQGTRDMGMTVESCYFRDFQWYNPTSFNGDKVDHAAAETWLEAIEA
Sbjct: 161 LTQLMQTLVANQAAMQGTRDMGMTVESCYFRDFQWYNPTSFNGDKVDHAAAETWLEAIEA 220

Query: 181 IFLYMNCPPEYQVHCGTYMLKGEAHFWWKGARKTITP 218
           IFLYMNCPPEYQVHCGTYMLKGEAHFWWKGARKTITP
Sbjct: 221 IFLYMNCPPEYQVHCGTYMLKGEAHFWWKGARKTITP 257

[Close]

BLAST of CmoCh16G006660 vs. NCBI nr
Match: XP_022929329.1 (uncharacterized protein LOC111435938 isoform X6 [Cucurbita moschata] >XP_022929330.1 uncharacterized protein LOC111435938 isoform X6 [Cucurbita moschata] >XP_022929331.1 uncharacterized protein LOC111435938 isoform X6 [Cucurbita moschata])

HSP 1 Score: 437.2 bits (1123), Expect = 1.3e-118
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MALKRRGAYLRLGPRRGRRRVEEDPTIPIPEVEQRPPLEETRELTSDEEQAPPQTPTPRR 60
           MALKRRGAYLRLGPRRGRRRVEEDPTIPIPEVEQRPPLEETRELTSDEEQAPPQTPTPRR
Sbjct: 8   MALKRRGAYLRLGPRRGRRRVEEDPTIPIPEVEQRPPLEETRELTSDEEQAPPQTPTPRR 67

Query: 61  GRRKTELRAIQETVPQDPAPRGTPPAPALIPEEVPAQPSTTFTRDVLQVFMRTSMENQAQ 120
           GRRKTELRAIQETVPQDPAPRGTPPAPALIPEEVPAQPSTTFTRDVLQVFMRTSMENQAQ
Sbjct: 68  GRRKTELRAIQETVPQDPAPRGTPPAPALIPEEVPAQPSTTFTRDVLQVFMRTSMENQAQ 127

Query: 121 LTQLMQTLVANQAAMQGTRDMGMTVESCYFRDFQWYNPTSFNGDKVDHAAAETWLEAIEA 180
           LTQLMQTLVANQAAMQGTRDMGMTVESCYFRDFQWYNPTSFNGDKVDHAAAETWLEAIEA
Sbjct: 128 LTQLMQTLVANQAAMQGTRDMGMTVESCYFRDFQWYNPTSFNGDKVDHAAAETWLEAIEA 187

Query: 181 IFLYMNCPPEYQVHCGTYMLKGEAHFWWKGARKTITP 218
           IFLYMNCPPEYQVHCGTYMLKGEAHFWWKGARKTITP
Sbjct: 188 IFLYMNCPPEYQVHCGTYMLKGEAHFWWKGARKTITP 224

[Close]

BLAST of CmoCh16G006660 vs. NCBI nr
Match: XP_022929325.1 (uncharacterized protein LOC111435938 isoform X2 [Cucurbita moschata])

HSP 1 Score: 400.6 bits (1028), Expect = 1.3e-107
Identity = 202/217 (93.09%), Postives = 202/217 (93.09%), Query Frame = 0


Query: 1   MALKRRGAYLRLGPRRGRRRVEEDPTIPIPEVEQRPPLEETRELTSDEEQAPPQTPTPRR 60
           MALKRRGAYLRLGPRRGRRRVEEDPTIPIPEVEQRPPLEETRELTSDEEQAPPQTPTPRR
Sbjct: 58  MALKRRGAYLRLGPRRGRRRVEEDPTIPIPEVEQRPPLEETRELTSDEEQAPPQTPTPRR 117

Query: 61  GRRKTELRAIQETVPQDPAPRGTPPAPALIPEEVPAQPSTTFTRDVLQVFMRTSMENQAQ 120
           GRRKTELRAIQETVPQDPAPRGTPPAPALIPEEVPAQPSTTFTRDVL             
Sbjct: 118 GRRKTELRAIQETVPQDPAPRGTPPAPALIPEEVPAQPSTTFTRDVL------------- 177

Query: 121 LTQLMQTLVANQAAMQGTRDMGMTVESCYFRDFQWYNPTSFNGDKVDHAAAETWLEAIEA 180
             QLMQTLVANQAAMQGTRDMGMTVESCYFRDFQWYNPTSFNGDKVDHAAAETWLEAIEA
Sbjct: 178 --QLMQTLVANQAAMQGTRDMGMTVESCYFRDFQWYNPTSFNGDKVDHAAAETWLEAIEA 237

Query: 181 IFLYMNCPPEYQVHCGTYMLKGEAHFWWKGARKTITP 218
           IFLYMNCPPEYQVHCGTYMLKGEAHFWWKGARKTITP
Sbjct: 238 IFLYMNCPPEYQVHCGTYMLKGEAHFWWKGARKTITP 259

The following BLAST results are available for this feature:

BLAST of CmoCh16G006660 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh16G006660 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ENE9	6.3e-119	100.00	uncharacterized protein LOC111435938 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1ENF3	6.3e-119	100.00	uncharacterized protein LOC111435938 isoform X6 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1EMU0	6.3e-119	100.00	uncharacterized protein LOC111435938 isoform X3 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1EMH7	6.3e-119	100.00	uncharacterized protein LOC111435938 isoform X7 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1EU38	6.5e-108	93.09	uncharacterized protein LOC111435938 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of CmoCh16G006660 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022929332.1	1.3e-118	100.00	uncharacterized protein LOC111435938 isoform X7 [Cucurbita moschata]	[more]
XP_022929323.1	1.3e-118	100.00	uncharacterized protein LOC111435938 isoform X1 [Cucurbita moschata] >XP_0229293...	[more]
XP_022929326.1	1.3e-118	100.00	uncharacterized protein LOC111435938 isoform X3 [Cucurbita moschata]	[more]
XP_022929329.1	1.3e-118	100.00	uncharacterized protein LOC111435938 isoform X6 [Cucurbita moschata] >XP_0229293...	[more]
XP_022929325.1	1.3e-107	93.09	uncharacterized protein LOC111435938 isoform X2 [Cucurbita moschata]	[more]

BLAST of CmoCh16G006660 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..100
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 15..47
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 78..92

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh16G006660.1	CmoCh16G006660.1	mRNA