CmoCh16G006650 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh16G006650
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Sodium-dependent phosphate transporter 1
Location	Cmo_Chr16: 3310467 .. 3310981 (+)
RNA-Seq Expression	CmoCh16G006650
Synteny	CmoCh16G006650

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGGCTTCAGAATCCGCACTCTCGCGCTATCAGTGAGCGGTATTGCTTAGTTTCTACAATATCTCTCTACATTTTTCTCAATTTTCTCCCTTCTTAATGTGTGTTGCTACGCTTGAAGAGGCCAGCTGATGTAATCTCCTCCGTGTCCGAGCGATCAGAAGCTGTTGATCCTATCTTAGAGAGGCTCAAGTCACTGGAAATCGTAAGCTCATTTGTTATCTCTCTTTTCGTTTGAGACTTGGAGATTATTTACACCTAATTTCTTTGAGTTTGTCGAACTTGGATCTGAATTTAGAATTTCATTTGGATTATTTCGTATTATAGACAACACCGATATTGCAGTCACCTCCTACGGAAGGTAGTCTGACAGATATCTTAGTAAGAAAACCTCCCTCTTCTTCAAGTGCTGGTAGGATTTTTAGGATTGAACTCATTGTTTGTTTAGTTTAAGTTTGGGTTAAGATTGGATTTCTTATTATTTTTTCTATACTGTTTTGGTAATTATGAGTTGT

mRNA sequence

ATGTGGGCTTCAGAATCCGCACTCTCGCGCTATCAGCCAGCTGATGTAATCTCCTCCGTGTCCGAGCGATCAGAAGCTGTTGATCCTATCTTAGAGAGGCTCAAGTCACTGGAAATCACAACACCGATATTGCAGTCACCTCCTACGGAAGGTAGTCTGACAGATATCTTAGTAAGAAAACCTCCCTCTTCTTCAAGTGCTGGTAGGATTTTTAGGATTGAACTCATTGTTTGTTTAGTTTAAGTTTGGGTTAAGATTGGATTTCTTATTATTTTTTCTATACTGTTTTGGTAATTATGAGTTGT

Coding sequence (CDS)

ATGTGGGCTTCAGAATCCGCACTCTCGCGCTATCAGCCAGCTGATGTAATCTCCTCCGTGTCCGAGCGATCAGAAGCTGTTGATCCTATCTTAGAGAGGCTCAAGTCACTGGAAATCACAACACCGATATTGCAGTCACCTCCTACGGAAGGTAGTCTGACAGATATCTTAGTAAGAAAACCTCCCTCTTCTTCAAGTGCTGGTAGGATTTTTAGGATTGAACTCATTGTTTGTTTAGTTTAA

Protein sequence

MWASESALSRYQPADVISSVSERSEAVDPILERLKSLEITTPILQSPPTEGSLTDILVRKPPSSSSAGRIFRIELIVCLV

Homology

[Close]

BLAST of CmoCh16G006650 vs. ExPASy TrEMBL
Match: A0A6J1C569 (uncharacterized protein LOC111008467 OS=Momordica charantia OX=3673 GN=LOC111008467 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 2.7e-20
Identity = 59/73 (80.82%), Postives = 66/73 (90.41%), Query Frame = 0


Query: 1  MWASESALSRYQ---PADVISSVSERSEAVDPILERLKSLEITTPILQSPPTEGSLTDIL 60
          M ASES+LS  Q   PADVIS+VSERSEAVDP+LERLKSL+ITTPILQSPPTEGSLTDIL
Sbjct: 1  MGASESSLSSSQLARPADVISTVSERSEAVDPVLERLKSLQITTPILQSPPTEGSLTDIL 60

Query: 61 VRKPPSSSSAGRI 71
          VRKPPSS++AG +
Sbjct: 61 VRKPPSSTTAGTV 73

[Close]

BLAST of CmoCh16G006650 vs. ExPASy TrEMBL
Match: A0A6J1J3L4 (uncharacterized protein LOC111481498 OS=Cucurbita maxima OX=3661 GN=LOC111481498 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 1.0e-19
Identity = 60/70 (85.71%), Postives = 64/70 (91.43%), Query Frame = 0


Query: 1  MWASESALSRYQ---PADVISSVSERSEAVDPILERLKSLEITTPILQSPPTEGSLTDIL 60
          M ASES+LS  Q   PADVIS+VSERSEAVDPILERLKSL+ITTPILQSPPTEGSLTDIL
Sbjct: 1  MGASESSLSSSQKARPADVISTVSERSEAVDPILERLKSLKITTPILQSPPTEGSLTDIL 60

Query: 61 VRKPPSSSSA 68
          VRKPPSSS+A
Sbjct: 61 VRKPPSSSNA 70

[Close]

BLAST of CmoCh16G006650 vs. ExPASy TrEMBL
Match: A0A6J1FVK8 (uncharacterized protein LOC111447685 OS=Cucurbita moschata OX=3662 GN=LOC111447685 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 1.0e-19
Identity = 60/70 (85.71%), Postives = 64/70 (91.43%), Query Frame = 0


Query: 1  MWASESALSRYQ---PADVISSVSERSEAVDPILERLKSLEITTPILQSPPTEGSLTDIL 60
          M ASES+LS  Q   PADVIS+VSERSEAVDPILERLKSL+ITTPILQSPPTEGSLTDIL
Sbjct: 1  MGASESSLSSSQKARPADVISTVSERSEAVDPILERLKSLKITTPILQSPPTEGSLTDIL 60

Query: 61 VRKPPSSSSA 68
          VRKPPSSS+A
Sbjct: 61 VRKPPSSSNA 70

[Close]

BLAST of CmoCh16G006650 vs. ExPASy TrEMBL
Match: A0A5D3CYS3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G004860 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.8e-19
Identity = 60/70 (85.71%), Postives = 64/70 (91.43%), Query Frame = 0


Query: 1  MWASESALSR---YQPADVISSVSERSEAVDPILERLKSLEITTPILQSPPTEGSLTDIL 60
          M ASESALSR    + ADVIS+VSERSEAVDPILERLKSL+ITTPILQSPPTEGSLTDIL
Sbjct: 1  MGASESALSRSLSTRSADVISTVSERSEAVDPILERLKSLQITTPILQSPPTEGSLTDIL 60

Query: 61 VRKPPSSSSA 68
          VRKPPSSS+A
Sbjct: 61 VRKPPSSSNA 70

[Close]

BLAST of CmoCh16G006650 vs. ExPASy TrEMBL
Match: A0A5A7TU92 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G001000 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.8e-19
Identity = 60/70 (85.71%), Postives = 64/70 (91.43%), Query Frame = 0


Query: 1  MWASESALSR---YQPADVISSVSERSEAVDPILERLKSLEITTPILQSPPTEGSLTDIL 60
          M ASESALSR    + ADVIS+VSERSEAVDPILERLKSL+ITTPILQSPPTEGSLTDIL
Sbjct: 1  MGASESALSRSLSTRSADVISTVSERSEAVDPILERLKSLQITTPILQSPPTEGSLTDIL 60

Query: 61 VRKPPSSSSA 68
          VRKPPSSS+A
Sbjct: 61 VRKPPSSSNA 70

[Close]

BLAST of CmoCh16G006650 vs. NCBI nr
Match: KAG6577209.1 (hypothetical protein SDJN03_24783, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 129.0 bits (323), Expect = 1.8e-26
Identity = 72/74 (97.30%), Postives = 72/74 (97.30%), Query Frame = 0


Query: 7   ALSRYQPADVISSVSERSEAVDPILERLKSLEITTPILQSPPTEGSLTDILVRKPPSSSS 66
           ALSR  PADVISSVSERSEAVDPILERLKSLEITTPILQSPPTEGSLTDILVRKPPSSSS
Sbjct: 61  ALSR--PADVISSVSERSEAVDPILERLKSLEITTPILQSPPTEGSLTDILVRKPPSSSS 120

Query: 67  AGRIFRIELIVCLV 81
           AGRIFRIELIVCLV
Sbjct: 121 AGRIFRIELIVCLV 132

[Close]

BLAST of CmoCh16G006650 vs. NCBI nr
Match: XP_022136885.1 (uncharacterized protein LOC111008467 [Momordica charantia])

HSP 1 Score: 107.5 bits (267), Expect = 5.6e-20
Identity = 59/73 (80.82%), Postives = 66/73 (90.41%), Query Frame = 0


Query: 1  MWASESALSRYQ---PADVISSVSERSEAVDPILERLKSLEITTPILQSPPTEGSLTDIL 60
          M ASES+LS  Q   PADVIS+VSERSEAVDP+LERLKSL+ITTPILQSPPTEGSLTDIL
Sbjct: 1  MGASESSLSSSQLARPADVISTVSERSEAVDPVLERLKSLQITTPILQSPPTEGSLTDIL 60

Query: 61 VRKPPSSSSAGRI 71
          VRKPPSS++AG +
Sbjct: 61 VRKPPSSTTAGTV 73

[Close]

BLAST of CmoCh16G006650 vs. NCBI nr
Match: XP_022942738.1 (uncharacterized protein LOC111447685 [Cucurbita moschata])

HSP 1 Score: 105.5 bits (262), Expect = 2.1e-19
Identity = 60/70 (85.71%), Postives = 64/70 (91.43%), Query Frame = 0


Query: 1  MWASESALSRYQ---PADVISSVSERSEAVDPILERLKSLEITTPILQSPPTEGSLTDIL 60
          M ASES+LS  Q   PADVIS+VSERSEAVDPILERLKSL+ITTPILQSPPTEGSLTDIL
Sbjct: 1  MGASESSLSSSQKARPADVISTVSERSEAVDPILERLKSLKITTPILQSPPTEGSLTDIL 60

Query: 61 VRKPPSSSSA 68
          VRKPPSSS+A
Sbjct: 61 VRKPPSSSNA 70

[Close]

BLAST of CmoCh16G006650 vs. NCBI nr
Match: KAG6600576.1 (hypothetical protein SDJN03_05809, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 105.5 bits (262), Expect = 2.1e-19
Identity = 60/70 (85.71%), Postives = 64/70 (91.43%), Query Frame = 0


Query: 1  MWASESALSRYQ---PADVISSVSERSEAVDPILERLKSLEITTPILQSPPTEGSLTDIL 60
          M ASES+LS  Q   PADVIS+VSERSEAVDPILERLKSL+ITTPILQSPPTEGSLTDIL
Sbjct: 1  MGASESSLSSSQKARPADVISTVSERSEAVDPILERLKSLKITTPILQSPPTEGSLTDIL 60

Query: 61 VRKPPSSSSA 68
          VRKPPSSS+A
Sbjct: 61 VRKPPSSSNA 70

[Close]

BLAST of CmoCh16G006650 vs. NCBI nr
Match: KAG7031216.1 (hypothetical protein SDJN02_05256 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 105.5 bits (262), Expect = 2.1e-19
Identity = 60/70 (85.71%), Postives = 64/70 (91.43%), Query Frame = 0


Query: 1  MWASESALSRYQ---PADVISSVSERSEAVDPILERLKSLEITTPILQSPPTEGSLTDIL 60
          M ASES+LS  Q   PADVIS+VSERSEAVDPILERLKSL+ITTPILQSPPTEGSLTDIL
Sbjct: 1  MGASESSLSSSQKARPADVISTVSERSEAVDPILERLKSLKITTPILQSPPTEGSLTDIL 60

Query: 61 VRKPPSSSSA 68
          VRKPPSSS+A
Sbjct: 61 VRKPPSSSNA 70

[Close]

BLAST of CmoCh16G006650 vs. TAIR 10
Match: AT5G66290.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 74.7 bits (182), Expect = 3.7e-14
Identity = 43/72 (59.72%), Postives = 54/72 (75.00%), Query Frame = 0


Query: 1  MWASESAL--SRYQPADVISSVSERSEAVDPILERLKSLEITTPILQSPPTEGSLTDILV 60
          M AS+S L  S+    DVI+++S RSE VDPILE LK+L ++ PIL+SPPTE SLTDILV
Sbjct: 1  MGASDSTLLGSQENRGDVITTISHRSEIVDPILENLKALTVSRPILKSPPTESSLTDILV 60

Query: 61 RKPPSSSSAGRI 71
          RK  SSSS+  +
Sbjct: 61 RKALSSSSSNTV 72

The following BLAST results are available for this feature:

BLAST of CmoCh16G006650 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh16G006650 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C569	2.7e-20	80.82	uncharacterized protein LOC111008467 OS=Momordica charantia OX=3673 GN=LOC111008...	[more]
A0A6J1J3L4	1.0e-19	85.71	uncharacterized protein LOC111481498 OS=Cucurbita maxima OX=3661 GN=LOC111481498...	[more]
A0A6J1FVK8	1.0e-19	85.71	uncharacterized protein LOC111447685 OS=Cucurbita moschata OX=3662 GN=LOC1114476...	[more]
A0A5D3CYS3	1.8e-19	85.71	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7TU92	1.8e-19	85.71	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of CmoCh16G006650 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6577209.1	1.8e-26	97.30	hypothetical protein SDJN03_24783, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022136885.1	5.6e-20	80.82	uncharacterized protein LOC111008467 [Momordica charantia]	[more]
XP_022942738.1	2.1e-19	85.71	uncharacterized protein LOC111447685 [Cucurbita moschata]	[more]
KAG6600576.1	2.1e-19	85.71	hypothetical protein SDJN03_05809, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7031216.1	2.1e-19	85.71	hypothetical protein SDJN02_05256 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of CmoCh16G006650 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G66290.1	3.7e-14	59.72	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36409	EXPRESSED PROTEIN	coord: 1..68
None	No IPR available	PANTHER	PTHR36409:SF1	EXPRESSED PROTEIN	coord: 1..68

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh16G006650.1	CmoCh16G006650.1	mRNA