CmoCh16G006560 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh16G006560
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionAT-rich interactive domain-containing protein 2
LocationCmo_Chr16: 3238168 .. 3243114 (-)
RNA-Seq ExpressionCmoCh16G006560
SyntenyCmoCh16G006560
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GATCTTAGAACTTAGCAGACTTAGCTTCAAACCAAAACCCTCAGGCCCTAACCATCTTCATCCAAGAGCCCCTAATTGGTGTTCGTTTCGTTGATTCGCCCCCAACTTCAATCATTTATAATCCGATCAAGTTCCGGCCGTCGTGTATTTGACTGTCCCACGCCACTGCCATCCCTTTTGTCTTGGTGTTCCATCTTCATCACTGCTATCTTCGTCTTCATAAATGGGTTGCAGGAAGAAAGGAGTCCCAGATTCCCAAAACGAGGTAGAGCATTTTGACTTTTCATGGCAAAGGGTTTAATCTATCTTTTGCGTTAATCTTGGAGGGTTTCTGTTTGTTTCGTATGTATTTTTTAACAAGAAAGAAGAGTTCCGTGCGAATTTGCTTTGATTTTAAAGTGGGTTTGTGTTCATGGGGAGATGGCACGTTTCATCTAATGCTTCCATTTTAGATTGCAATAAAGATGTAGATCCTAATCCTAGTAATGGCTGTTGCATTGCTTCGGATTGTTTGGTAGAGAGGAGTTATGAAAATGTTGATTATGATGATTGCAAGGCGAGAATTAGATGCTATTTTGAGAAAATTCTTTGGGTTTTTTTAAAGGAAATTGGTCGTAGAGGATTTGTTAGGCCACTGCCTGCGTTAATAGGTGAAGGGGGAGCTTTGGATTTGTTTGAACTGTTCTTGGTAGTAAGAGATAAAGGAGGTTCTCAAGTGGTTTCAGAGAAGAAACTATGGTCTTCAGTGGTTGTCGAATTAGGTTTGGATCTTGGGCTTTCGGCGTCGGTGAAATTGATTTATTCCAAGTACTTAAGTGATCTAGAGAAATGGCTTATGGTGAGATGTGGAGACACAAAACTGGAAAATGGGAGCTCTGATTATTGCTACAAGAAAAGTTCTCCATTTTTATCGGAACTCGGGGCAAAGATTAACGGTATGTTGTATGGTGTGCCGAGACAAAATAGCATATATGATGAATGTTTTGGATTCAAATCTAACAAACAGAATGGGAACGTTAATGTTGCTGCTGCTGCTGCAGTGGAGAAGGAAATAAAATTCCCTGAAATAAAGAAGAAAGAGCACGATCTCCATGGGGATGTTACATCAATTCAACAAGATTGTACAGAGACGCATCCAATCCATGTTATTGAAGATGGTCAAAGTTTGGATGCTGTTAATGTTGAAGCTGAAATAGAATCTCTTGGGAAATATCGAGAATCGTTATTACGAATGCTGAAGTGGGTGAGAAAGACTGCGAAGCATCCTGAAGATCCATTAAATGGTACAATACCGGGGACATCTAGGTGGAAAGGTTACTCGAGCGACGATGCATTATGGCTTCAAGTAATCAGGGCAAAGGATGCTCTTCTAATTAGGAAGGGTGTTGACAAAATTGCTGAGAAACGTCTGTTAATACAGGTAGATTTCACCCACTTATTCTGATTGTAAGCCAGTTCTCTCTCTCTCCCTCTTCCCCTTTTTTCCTTGACCGATCGACATACTTGCTTTCTTGCTTTGGACTGCAATTATGCGCAAACTGACGTGTGCAGGTATTACGATCTTTGGCTTTCTTTTTCAGGATAGAGTCTTCTGATCATAATCAGCGCCCTTTTCTTTCATATATAGAACGGGAAAGTTACCTCCTGCTATTAGAACCTTGGGTCTCCATCATCATAAGCAAGCAGCATACGACTACTGTCTCCCTGTCTTGCGTCCTATGTGATAACATGATGGACACAGTAAGGAAAACTTAGATCTTTGTCATTGGGTTTACTAGCATAGTCTTTACTTTATCAGGGATACTTAAAAGGCCAATAGGATCAGGTTTGACCTTGTTTATGGGTTCTGACGTTTTCACCTTTTAGCTCACTATTAGGAGTTTACATCTCTCAATTTTCACGTAAGTTCGGCTGAAAACATAACAGAGCTCTTGCCACCACCAATAGAACGTGTTTATATTTATTACCTTTCTTTTGGGAGAACAAGGTCTTAGTGTTTTCTAAATGGAAGTTGTTATTCGTTATAAAGTCGAGTGTCAAGTTGTGCAGGGTAGTCTATGCTCTTGGGGGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGGGGGGGGGGGGGTGGAGATTCAAGGCAGCTCATAGGGTTTCAAACTTAATAGAAGGATGATTTCTTTGAGGAAAGTTTACGAGATGGATATGAATGTATCTGGGGATTCGAGGGTCAGGAAATCAAAAGTGGATTTACATAGCTTCCCGAAGATGAGTAGGATTGAAAGGACGAGAGTTTCATCGAGAATTTTGAGGATTGAATAAGGCTTAGGAGATCGTTGGAGGTGGTGAATATTAGTGAGAGCTCTAGATGGAAGAAAAATTCCCATGTCCAATGGATTTAGGAGGATGATGCTAATAGAACCTAGGAGGAAGAGTAACCTAGTGAATGTGAATACGACCGCTTTCACTTAGGAAAAGGATATGTCTCGTATCTTCCTTCGTGCAACGTTGTTTGTAGGCATTAAGGGGGTTTTTCGTAAGGGTTTTTTTTTTTTTTTTTTTGATAAGAAACGAACTTTTCATTATCAAGGGAAGAATACATAAGGAGGGGAGATGAGATATCCCCACACACCAAAGGCTTACAGAAAAGATGCACAACTGGTAACAACGAGATAAGCTATAATTACAAAATAATTTAGAAGTGCTAGACAAAGTAGAAGCAAAAAGAGTTAAAGGATCCCGAAAAACCTCCCTGCCAGACTCATGGCTATTGAAAAGTTTCGAGTTTCTCTCAAACCAAAGCCGCCAAAGGAGGGCAAACACCCCTTTAGACCAAAAAATCTTGGCTTGCCCTTTAAAATGCATGCCACCAATGAGCTGACATCGGGCCTCTGACACTTTGCTAGGCCAACACCATTGAATACTGAAGACTTTGAGTTATACTTTGTGGCATTCACTTTCCTCATATGGTCTCCTTCTCATCATGAAACACCAGCCCCATTTGGCAAGGGGAGCCCAATTCCTCATGGCAAGGTTACAATAGAAATAGGGAGGGAAGTTATTTCCTAGTTTATAAGATTCATCATTCCATCCACTTTGCCACCTTTATTTCCCAGTCTAAGCTTTCCTTCTGCCGATAGGATATTACGATCTATGAAGTAAAAACGACACAGTTTAAGTAATTTGTCATGACGTGCAATAATTATCCTTTTGCTTTAGACTTTTCATATATCTTTTATTTTCCTTTTGAAAATTCGGGAATCGTTTTGAGCTTGTTTTGATATATTTATGACAAAGACATGTTCATACACTTGGACACAACTATTAACTTATTTGGTTTCGTACATCCTTTATTAAACCGAACCATGAAAGGCTGCTTTCACTTATGCTTATATGCTGATGACATATATAAGTTTATGAGACATGTTTATATAATTGAATATATCTGTTCTAGTGCCATTTATGTTTAGTGTAGGCAGTGCCTATGTACTTGCTCCTTAGGTTAGGAAGCATAAGTTATAGCTACGAAGAAAGAAGCGTATCTGTCAATGGTTTCTTTGTTTAAACAGAATGAAATGAACTACTGAGTTTGAGGAAAAAAAATTGGTTTAAACTTGCAGAAGAAAGTAAAGATGCATCCATCCATTTATGAGGATAATATTGATAACCATCACCTCTCTACAGAAAGGATAAGTTGCAGCAAAAGATCTAAAGCTTTGACTGAGTCCGTACTCGCCCCGTGTTCTAATTCTTGTCCAACCGTTCGAAGTAATTGTATTAGTAGTCTAACAACAGAAGTTGGAAAGGGACTCAAGAATCAAGCAGTTTTGAATGGTGATATACCATCTGAAATGGAAGACGATCATCCGAATGAAGATTCAGCTGAGGAGACGGTTCCCGTGGGTGCTGTATGTCAAGCAGATTTACCTGAATGGACTGGTAATAATTCTGATAGTGACTCTAAATGGCTAGGGACACGGTCGTGGCCTCTTCAACACAGAAATAGTAATTCCGTACGTGATAGACGCGCCATTGGCAGAGGGAGACCGGATTCATGTGGCTGCCAATTTCCAGGTTCGGTTGAATGTTTTAGATTTCACATAGCTGAAGCAAGGATGAGATTAAAGCTCGAGCTTGGCTCGACATTCTTTGCATGGAGATTTCATCAAATGGGGGAGGAAATATCTCTGCAATGGACAGTTGAAGAGGAAAAGAGATTCAAGGAGTTGGCTATGTCAGGTTTCAACAATCATAATCGGTGCTTTTGGGACTATTCCTTGAGATGGTTTCCTATGAAATCAAGGAAAAATCTGATAAGCTATTACTTCAATGTGTTTCTTTTACGGCTGAGAAGCTATCAGAATCGCGTAACTCCGAATAGCATCGATAGCGACGATGAAGATTTTGAGTTCGGTCGTGTTAGTGGTGGATTTGGGGACAAGGCAATGGAAATTTTAGGCTCAAATTCTTTAGAATGTTCTATAAACAGACAGGTCACAGATGTGGAGTAGTCTAAAACTGGAGCAGAATCCGAAGTATCTAAAAAAGAGGGAAAGGAACGCAATTTTGACGAGAACTCGAGTTACGTTTTAGCTATACAACACCGATATCGGTACTTTATGGTGCTAGGTATTATATTTTTTGGGGAGGATCTGTATGGTATCGGCTGGTGAGAAATATGAGGATCAAAGATGGCCATTGCTACATTTGTTTGTTCTGAATTTGTGTTGTGTGGAACTCAATCTGATAGTTCTTGGTTTTGTATTTGGAGTTTGGTTTTAATCATTCCAAGGGGCTCTGATAAGAAAGCTTGAGAATAGCTCACCAGACACGTTTATATCGGTTGATTCGTGGAAAATTTTGTCATGTTTTTAAATTATTTGTCGAGGTAACATGTTTTTAAATTATTTGTCGAGGTAACATGTTTGTAAAT

mRNA sequence

GATCTTAGAACTTAGCAGACTTAGCTTCAAACCAAAACCCTCAGGCCCTAACCATCTTCATCCAAGAGCCCCTAATTGGTGTTCGTTTCGTTGATTCGCCCCCAACTTCAATCATTTATAATCCGATCAAGTTCCGGCCGTCGTGTATTTGACTGTCCCACGCCACTGCCATCCCTTTTGTCTTGGTGTTCCATCTTCATCACTGCTATCTTCGTCTTCATAAATGGGTTGCAGGAAGAAAGGAGTCCCAGATTCCCAAAACGAGGTAGAGCATTTTGACTTTTCATGGCAAAGGGTTTAATCTATCTTTTGCGTTAATCTTGGAGGGTTTCTGTTTGTTTCGTATGTATTTTTTAACAAGAAAGAAGAGTTCCGTGCGAATTTGCTTTGATTTTAAAGTGGGTTTGTGTTCATGGGGAGATGGCACGTTTCATCTAATGCTTCCATTTTAGATTGCAATAAAGATGTAGATCCTAATCCTAGTAATGGCTGTTGCATTGCTTCGGATTGTTTGGTAGAGAGGAGTTATGAAAATGTTGATTATGATGATTGCAAGGCGAGAATTAGATGCTATTTTGAGAAAATTCTTTGGGTTTTTTTAAAGGAAATTGGTCGTAGAGGATTTGTTAGGCCACTGCCTGCGTTAATAGGTGAAGGGGGAGCTTTGGATTTGTTTGAACTGTTCTTGGTAGTAAGAGATAAAGGAGGTTCTCAAGTGGTTTCAGAGAAGAAACTATGGTCTTCAGTGGTTGTCGAATTAGGTTTGGATCTTGGGCTTTCGGCGTCGGTGAAATTGATTTATTCCAAGTACTTAAGTGATCTAGAGAAATGGCTTATGGTGAGATGTGGAGACACAAAACTGGAAAATGGGAGCTCTGATTATTGCTACAAGAAAAGTTCTCCATTTTTATCGGAACTCGGGGCAAAGATTAACGGTATGTTGTATGGTGTGCCGAGACAAAATAGCATATATGATGAATGTTTTGGATTCAAATCTAACAAACAGAATGGGAACGTTAATGTTGCTGCTGCTGCTGCAGTGGAGAAGGAAATAAAATTCCCTGAAATAAAGAAGAAAGAGCACGATCTCCATGGGGATGTTACATCAATTCAACAAGATTGTACAGAGACGCATCCAATCCATGTTATTGAAGATGGTCAAAGTTTGGATGCTGTTAATGTTGAAGCTGAAATAGAATCTCTTGGGAAATATCGAGAATCGTTATTACGAATGCTGAAGTGGGTGAGAAAGACTGCGAAGCATCCTGAAGATCCATTAAATGGTACAATACCGGGGACATCTAGGTGGAAAGGTTACTCGAGCGACGATGCATTATGGCTTCAAGTAATCAGGGCAAAGGATGCTCTTCTAATTAGGAAGGGTGTTGACAAAATTGCTGAGAAACGTCTGTTAATACAGAAGAAAGTAAAGATGCATCCATCCATTTATGAGGATAATATTGATAACCATCACCTCTCTACAGAAAGGATAAGTTGCAGCAAAAGATCTAAAGCTTTGACTGAGTCCGTACTCGCCCCGTGTTCTAATTCTTGTCCAACCGTTCGAAGTAATTGTATTAGTAGTCTAACAACAGAAGTTGGAAAGGGACTCAAGAATCAAGCAGTTTTGAATGGTGATATACCATCTGAAATGGAAGACGATCATCCGAATGAAGATTCAGCTGAGGAGACGGTTCCCGTGGGTGCTGTATGTCAAGCAGATTTACCTGAATGGACTGGTAATAATTCTGATAGTGACTCTAAATGGCTAGGGACACGGTCGTGGCCTCTTCAACACAGAAATAGTAATTCCGTACGTGATAGACGCGCCATTGGCAGAGGGAGACCGGATTCATGTGGCTGCCAATTTCCAGGTTCGGTTGAATGTTTTAGATTTCACATAGCTGAAGCAAGGATGAGATTAAAGCTCGAGCTTGGCTCGACATTCTTTGCATGGAGATTTCATCAAATGGGGGAGGAAATATCTCTGCAATGGACAGTTGAAGAGGAAAAGAGATTCAAGGAGTTGGCTATGTCAGGTTTCAACAATCATAATCGGTGCTTTTGGGACTATTCCTTGAGATGGTTTCCTATGAAATCAAGGAAAAATCTGATAAGCTATTACTTCAATGTGTTTCTTTTACGGCTGAGAAGCTATCAGAATCGCGTAACTCCGAATAGCATCGATAGCGACGATGAAGATTTTGAGTTCGGTCGTGTTAGTGGTGGATTTGGGGACAAGGCAATGGAAATTTTAGGCTCAAATTCTTTAGAATGTTCTATAAACAGACAGGTCACAGATGTGGAGTAGTCTAAAACTGGAGCAGAATCCGAAGTATCTAAAAAAGAGGGAAAGGAACGCAATTTTGACGAGAACTCGAGTTACGTTTTAGCTATACAACACCGATATCGGTACTTTATGGTGCTAGGTATTATATTTTTTGGGGAGGATCTGTATGGTATCGGCTGGTGAGAAATATGAGGATCAAAGATGGCCATTGCTACATTTGTTTGTTCTGAATTTGTGTTGTGTGGAACTCAATCTGATAGTTCTTGGTTTTGTATTTGGAGTTTGGTTTTAATCATTCCAAGGGGCTCTGATAAGAAAGCTTGAGAATAGCTCACCAGACACGTTTATATCGGTTGATTCGTGGAAAATTTTGTCATGTTTTTAAATTATTTGTCGAGGTAACATGTTTTTAAATTATTTGTCGAGGTAACATGTTTGTAAAT

Coding sequence (CDS)

ATGGGGAGATGGCACGTTTCATCTAATGCTTCCATTTTAGATTGCAATAAAGATGTAGATCCTAATCCTAGTAATGGCTGTTGCATTGCTTCGGATTGTTTGGTAGAGAGGAGTTATGAAAATGTTGATTATGATGATTGCAAGGCGAGAATTAGATGCTATTTTGAGAAAATTCTTTGGGTTTTTTTAAAGGAAATTGGTCGTAGAGGATTTGTTAGGCCACTGCCTGCGTTAATAGGTGAAGGGGGAGCTTTGGATTTGTTTGAACTGTTCTTGGTAGTAAGAGATAAAGGAGGTTCTCAAGTGGTTTCAGAGAAGAAACTATGGTCTTCAGTGGTTGTCGAATTAGGTTTGGATCTTGGGCTTTCGGCGTCGGTGAAATTGATTTATTCCAAGTACTTAAGTGATCTAGAGAAATGGCTTATGGTGAGATGTGGAGACACAAAACTGGAAAATGGGAGCTCTGATTATTGCTACAAGAAAAGTTCTCCATTTTTATCGGAACTCGGGGCAAAGATTAACGGTATGTTGTATGGTGTGCCGAGACAAAATAGCATATATGATGAATGTTTTGGATTCAAATCTAACAAACAGAATGGGAACGTTAATGTTGCTGCTGCTGCTGCAGTGGAGAAGGAAATAAAATTCCCTGAAATAAAGAAGAAAGAGCACGATCTCCATGGGGATGTTACATCAATTCAACAAGATTGTACAGAGACGCATCCAATCCATGTTATTGAAGATGGTCAAAGTTTGGATGCTGTTAATGTTGAAGCTGAAATAGAATCTCTTGGGAAATATCGAGAATCGTTATTACGAATGCTGAAGTGGGTGAGAAAGACTGCGAAGCATCCTGAAGATCCATTAAATGGTACAATACCGGGGACATCTAGGTGGAAAGGTTACTCGAGCGACGATGCATTATGGCTTCAAGTAATCAGGGCAAAGGATGCTCTTCTAATTAGGAAGGGTGTTGACAAAATTGCTGAGAAACGTCTGTTAATACAGAAGAAAGTAAAGATGCATCCATCCATTTATGAGGATAATATTGATAACCATCACCTCTCTACAGAAAGGATAAGTTGCAGCAAAAGATCTAAAGCTTTGACTGAGTCCGTACTCGCCCCGTGTTCTAATTCTTGTCCAACCGTTCGAAGTAATTGTATTAGTAGTCTAACAACAGAAGTTGGAAAGGGACTCAAGAATCAAGCAGTTTTGAATGGTGATATACCATCTGAAATGGAAGACGATCATCCGAATGAAGATTCAGCTGAGGAGACGGTTCCCGTGGGTGCTGTATGTCAAGCAGATTTACCTGAATGGACTGGTAATAATTCTGATAGTGACTCTAAATGGCTAGGGACACGGTCGTGGCCTCTTCAACACAGAAATAGTAATTCCGTACGTGATAGACGCGCCATTGGCAGAGGGAGACCGGATTCATGTGGCTGCCAATTTCCAGGTTCGGTTGAATGTTTTAGATTTCACATAGCTGAAGCAAGGATGAGATTAAAGCTCGAGCTTGGCTCGACATTCTTTGCATGGAGATTTCATCAAATGGGGGAGGAAATATCTCTGCAATGGACAGTTGAAGAGGAAAAGAGATTCAAGGAGTTGGCTATGTCAGGTTTCAACAATCATAATCGGTGCTTTTGGGACTATTCCTTGAGATGGTTTCCTATGAAATCAAGGAAAAATCTGATAAGCTATTACTTCAATGTGTTTCTTTTACGGCTGAGAAGCTATCAGAATCGCGTAACTCCGAATAGCATCGATAGCGACGATGAAGATTTTGAGTTCGGTCGTGTTAGTGGTGGATTTGGGGACAAGGCAATGGAAATTTTAGGCTCAAATTCTTTAGAATGTTCTATAAACAGACAGGTCACAGATGTGGAGTAG

Protein sequence

MGRWHVSSNASILDCNKDVDPNPSNGCCIASDCLVERSYENVDYDDCKARIRCYFEKILWVFLKEIGRRGFVRPLPALIGEGGALDLFELFLVVRDKGGSQVVSEKKLWSSVVVELGLDLGLSASVKLIYSKYLSDLEKWLMVRCGDTKLENGSSDYCYKKSSPFLSELGAKINGMLYGVPRQNSIYDECFGFKSNKQNGNVNVAAAAAVEKEIKFPEIKKKEHDLHGDVTSIQQDCTETHPIHVIEDGQSLDAVNVEAEIESLGKYRESLLRMLKWVRKTAKHPEDPLNGTIPGTSRWKGYSSDDALWLQVIRAKDALLIRKGVDKIAEKRLLIQKKVKMHPSIYEDNIDNHHLSTERISCSKRSKALTESVLAPCSNSCPTVRSNCISSLTTEVGKGLKNQAVLNGDIPSEMEDDHPNEDSAEETVPVGAVCQADLPEWTGNNSDSDSKWLGTRSWPLQHRNSNSVRDRRAIGRGRPDSCGCQFPGSVECFRFHIAEARMRLKLELGSTFFAWRFHQMGEEISLQWTVEEEKRFKELAMSGFNNHNRCFWDYSLRWFPMKSRKNLISYYFNVFLLRLRSYQNRVTPNSIDSDDEDFEFGRVSGGFGDKAMEILGSNSLECSINRQVTDVE
Homology
BLAST of CmoCh16G006560 vs. ExPASy Swiss-Prot
Match: Q9LDD4 (AT-rich interactive domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=ARID2 PE=1 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 1.0e-90
Identity = 232/609 (38.10%), Postives = 319/609 (52.38%), Query Frame = 0

Query: 38  SYENVD---YDDCKARIRCYFEKILWVFLKEIGRRGFVRPLPALIGEGGALDLFELFLVV 97
           SY +V+    D+C+ R+R  F++ L VFL+E    G ++PLPA+IG+G  +DLF+LF++V
Sbjct: 10  SYVDVEIKYVDECEERLRRLFDQALLVFLEE---EGSIKPLPAVIGDGKNVDLFKLFVLV 69

Query: 98  RDKGGSQVVSEKKLWSSVVVELGLDLGLSASVKLIYSKYLSDLEKWLMVRCGDTKLENGS 157
           R++ G   VS K+LW  V  +LG D  L  S+ LIY KYL+ +EKW +        +N  
Sbjct: 70  REREGFDTVSRKRLWEVVAEKLGFDCSLVPSLILIYLKYLNRMEKWAVEESRIVNWDNKD 129

Query: 158 SDY--CYKKSSPFLSELGAKINGMLYGVPRQNSIYDECFGFKSNKQNGNVNVAAAAAVEK 217
           S+   CY   S  L ELG   NG         S+ D     K  K+N  V        E 
Sbjct: 130 SEKKGCY---SGMLHELG---NGF-------KSLLD---NGKCQKRNRAVAFGCNHMEES 189

Query: 218 EIKFPEIKKKEHDLHGDVTSIQQDCTETHPIHVIEDGQSLDAVNVEAEIESLGKYRESLL 277
             +F   +K+  +   D   +           VI +   + AV       SL K R+ L 
Sbjct: 190 CSEFDRSRKRFRESDDDDKGVGLSSV------VIREETVVCAVEEGLSDFSLEK-RDDLP 249

Query: 278 RMLKWVRKTAKHPEDPLNGTIPGTSRWKGYSSDDALWLQVIRAKDALLIRKGVDKIAEKR 337
            MLKW+   A  P DP  G IP +S+WK Y+ +   WLQV RAK++LL+++   ++  + 
Sbjct: 250 GMLKWLALVATSPHDPAIGVIPHSSKWKQYNGNKC-WLQVARAKNSLLVQRDNAELRYRY 309

Query: 338 LLIQKKVKM-HPSIYEDNIDNHHLSTERISCSKRSKALTESVLAPCSNSCPTVRSNCISS 397
              +    + HPS+YED+      S  R+  S R   L++     CS+SC      C  S
Sbjct: 310 HPFRGHQNIHHPSMYEDD----RKSIGRLRYSIRPPNLSKH----CSSSC------CNGS 369

Query: 398 LTTEVGKGLKNQAVLNGDIPSEMEDDHPNEDSAEE---------TVPVGAVCQADLPEWT 457
               + K    +      I SE          A +          + VG   QA + EWT
Sbjct: 370 SLVSLSKSRSTKCRKLTIIASERAGLTAGTSRARKRNKAEIPRRCIKVGHQHQAQVDEWT 429

Query: 458 GNNSDSDSKWLGTRSWPLQHRNS-NSVRDRRAIGRGRPDSCGCQFPGSVECFRFHIAEAR 517
            +  DSDSKWLGTR WP ++  + +       +G+GRPDSC C+  G VEC R HIAE R
Sbjct: 430 ESGVDSDSKWLGTRIWPPENSEALDQTLGNDLVGKGRPDSCSCELSGFVECTRLHIAEKR 489

Query: 518 MRLKLELGSTFFAWRFHQMGEEISLQWTVEEEKRFKELAMSGFNNHNRCFWDYSLRWFPM 577
           M LK ELG  FF WRF+QMGEE+ L+WT EEEKRFK++ ++      + FW  + + FP 
Sbjct: 490 MELKRELGDDFFHWRFNQMGEEVCLRWTEEEEKRFKDMIIA----DPQSFWTNAAKNFPK 549

Query: 578 KSRKNLISYYFNVFLLRLRSYQNRVTPNSIDSDDEDFEFGRVSGGFGDKAMEILGSNSLE 631
           K R+ L+SYYFNVFL+  R YQNRVTP SIDSDDE   FG V G FG  A+   GS+ + 
Sbjct: 550 KKREELVSYYFNVFLINRRRYQNRVTPKSIDSDDEG-AFGSVGGSFGRDAVTSSGSDVMI 572

BLAST of CmoCh16G006560 vs. ExPASy Swiss-Prot
Match: Q84JT7 (AT-rich interactive domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=ARID1 PE=2 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 6.5e-66
Identity = 194/551 (35.21%), Postives = 257/551 (46.64%), Query Frame = 0

Query: 55  FEKILWVFLKEIGRRGFVRPLPALIGEGGALDLFELFLVVRDKGGSQVVSEKKLWSSVVV 114
           F  +L  FL E        PLPA+ GEG  +DLF LFL V  KGG   VSE   W  VV 
Sbjct: 49  FRPLLDSFLAEFCSADGFLPLPAMTGEGRTVDLFNLFLNVTHKGGFDAVSENGSWDEVVQ 108

Query: 115 ELGLDLGLSASVKLIYSKYLSDLEKWL-MVRCGDTKLE----NGSSDYCYKKSSPFLSEL 174
           E GL+   SAS KLIY KYL    +WL  V  GDT +     +G SD    + + FLSE+
Sbjct: 109 ESGLESYDSASAKLIYVKYLDAFGRWLNRVVAGDTDVSSVELSGISDALVARLNGFLSEV 168

Query: 175 GAKINGMLYGVPRQNSIYDECFGFKSNKQNGNVNVAAAAAVEKEIK-FPEIKKKEHDLHG 234
             K         ++     + F  K+ ++    +V   +A    +K F   K  E  L  
Sbjct: 169 KKKYELRKGRPAKELGAELKWFISKTKRRYDKHHVGKESASNDAVKEFQGSKLAERRL-- 228

Query: 235 DVTSIQQDCTETHPIHVIEDGQSLDAVNVEAEIESLGK-YRESLLRMLKWVRKTAKHPED 294
                         I ++E        +V  E  S GK  RE  L  LKW+   AK P D
Sbjct: 229 ------------EQIMILE--------SVTQECSSPGKRKRECPLETLKWLSDVAKDPCD 288

Query: 295 PLNGTIPGTSRWKGYSSDDALWLQVIRAKDALLIRKGVDKIAEKRLLIQKKVKMHPSIYE 354
           P  G +P  S W  Y S++  W Q++  + +   R   D   EK    QK  KMHP +Y+
Sbjct: 289 PSLGIVPDRSEWVSYGSEEP-WKQLLLFRAS---RTNNDSACEKTW--QKVQKMHPCLYD 348

Query: 355 DNIDNHHLSTERISCSKRSKALTESVLAPCSNSCPTVRSNCISSLTTEVGKGLKNQAVLN 414
           D+    +   ER+S     +  T                          G G        
Sbjct: 349 DSAGASYNLRERLSYEDYKRGKT--------------------------GNG-------- 408

Query: 415 GDIPSEMEDDHPNEDSAEETVPVGAVCQADLPEWTGNNSDSDSKWLGTRSWPL--QHRNS 474
            DI S  E+D P          VG+  QA +PEWTG   +SDSKWLGTR WPL  +   +
Sbjct: 409 SDIGSSDEEDRP-------CALVGSKFQAKVPEWTGITPESDSKWLGTRIWPLTKEQTKA 468

Query: 475 NSVRDRRAIGRGRPDSCGCQFPGSVECFRFHIAEARMRLKLELGSTFFAWRFHQMGEEIS 534
           N + +R  IG+GR D CGC  PGS+EC +FHI   R +LKLELG  F+ W F  MGE   
Sbjct: 469 NLLIERDRIGKGRQDPCGCHNPGSIECVKFHITAKRDKLKLELGPAFYMWCFDVMGECTL 528

Query: 535 LQWTVEEEKRFKELAMSGFNNHNRCFWDYSLRWFPMKSRKNLISYYFNVFLLRLRSYQNR 594
             WT  E K+ K L MS   + +  F   +    P KSR  ++SY++NV LL+ R+ Q+R
Sbjct: 529 QYWTDLELKKIKSL-MSSPPSLSPAFIHQAKMILPSKSRGKIVSYFYNVTLLQYRASQSR 529

Query: 595 VTPNSIDSDDE 597
           +TP+ IDSD +
Sbjct: 589 ITPHDIDSDTD 529

BLAST of CmoCh16G006560 vs. ExPASy TrEMBL
Match: A0A6J1ETI2 (AT-rich interactive domain-containing protein 2-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111437591 PE=4 SV=1)

HSP 1 Score: 1298.1 bits (3358), Expect = 0.0e+00
Identity = 632/632 (100.00%), Postives = 632/632 (100.00%), Query Frame = 0

Query: 1   MGRWHVSSNASILDCNKDVDPNPSNGCCIASDCLVERSYENVDYDDCKARIRCYFEKILW 60
           MGRWHVSSNASILDCNKDVDPNPSNGCCIASDCLVERSYENVDYDDCKARIRCYFEKILW
Sbjct: 1   MGRWHVSSNASILDCNKDVDPNPSNGCCIASDCLVERSYENVDYDDCKARIRCYFEKILW 60

Query: 61  VFLKEIGRRGFVRPLPALIGEGGALDLFELFLVVRDKGGSQVVSEKKLWSSVVVELGLDL 120
           VFLKEIGRRGFVRPLPALIGEGGALDLFELFLVVRDKGGSQVVSEKKLWSSVVVELGLDL
Sbjct: 61  VFLKEIGRRGFVRPLPALIGEGGALDLFELFLVVRDKGGSQVVSEKKLWSSVVVELGLDL 120

Query: 121 GLSASVKLIYSKYLSDLEKWLMVRCGDTKLENGSSDYCYKKSSPFLSELGAKINGMLYGV 180
           GLSASVKLIYSKYLSDLEKWLMVRCGDTKLENGSSDYCYKKSSPFLSELGAKINGMLYGV
Sbjct: 121 GLSASVKLIYSKYLSDLEKWLMVRCGDTKLENGSSDYCYKKSSPFLSELGAKINGMLYGV 180

Query: 181 PRQNSIYDECFGFKSNKQNGNVNVAAAAAVEKEIKFPEIKKKEHDLHGDVTSIQQDCTET 240
           PRQNSIYDECFGFKSNKQNGNVNVAAAAAVEKEIKFPEIKKKEHDLHGDVTSIQQDCTET
Sbjct: 181 PRQNSIYDECFGFKSNKQNGNVNVAAAAAVEKEIKFPEIKKKEHDLHGDVTSIQQDCTET 240

Query: 241 HPIHVIEDGQSLDAVNVEAEIESLGKYRESLLRMLKWVRKTAKHPEDPLNGTIPGTSRWK 300
           HPIHVIEDGQSLDAVNVEAEIESLGKYRESLLRMLKWVRKTAKHPEDPLNGTIPGTSRWK
Sbjct: 241 HPIHVIEDGQSLDAVNVEAEIESLGKYRESLLRMLKWVRKTAKHPEDPLNGTIPGTSRWK 300

Query: 301 GYSSDDALWLQVIRAKDALLIRKGVDKIAEKRLLIQKKVKMHPSIYEDNIDNHHLSTERI 360
           GYSSDDALWLQVIRAKDALLIRKGVDKIAEKRLLIQKKVKMHPSIYEDNIDNHHLSTERI
Sbjct: 301 GYSSDDALWLQVIRAKDALLIRKGVDKIAEKRLLIQKKVKMHPSIYEDNIDNHHLSTERI 360

Query: 361 SCSKRSKALTESVLAPCSNSCPTVRSNCISSLTTEVGKGLKNQAVLNGDIPSEMEDDHPN 420
           SCSKRSKALTESVLAPCSNSCPTVRSNCISSLTTEVGKGLKNQAVLNGDIPSEMEDDHPN
Sbjct: 361 SCSKRSKALTESVLAPCSNSCPTVRSNCISSLTTEVGKGLKNQAVLNGDIPSEMEDDHPN 420

Query: 421 EDSAEETVPVGAVCQADLPEWTGNNSDSDSKWLGTRSWPLQHRNSNSVRDRRAIGRGRPD 480
           EDSAEETVPVGAVCQADLPEWTGNNSDSDSKWLGTRSWPLQHRNSNSVRDRRAIGRGRPD
Sbjct: 421 EDSAEETVPVGAVCQADLPEWTGNNSDSDSKWLGTRSWPLQHRNSNSVRDRRAIGRGRPD 480

Query: 481 SCGCQFPGSVECFRFHIAEARMRLKLELGSTFFAWRFHQMGEEISLQWTVEEEKRFKELA 540
           SCGCQFPGSVECFRFHIAEARMRLKLELGSTFFAWRFHQMGEEISLQWTVEEEKRFKELA
Sbjct: 481 SCGCQFPGSVECFRFHIAEARMRLKLELGSTFFAWRFHQMGEEISLQWTVEEEKRFKELA 540

Query: 541 MSGFNNHNRCFWDYSLRWFPMKSRKNLISYYFNVFLLRLRSYQNRVTPNSIDSDDEDFEF 600
           MSGFNNHNRCFWDYSLRWFPMKSRKNLISYYFNVFLLRLRSYQNRVTPNSIDSDDEDFEF
Sbjct: 541 MSGFNNHNRCFWDYSLRWFPMKSRKNLISYYFNVFLLRLRSYQNRVTPNSIDSDDEDFEF 600

Query: 601 GRVSGGFGDKAMEILGSNSLECSINRQVTDVE 633
           GRVSGGFGDKAMEILGSNSLECSINRQVTDVE
Sbjct: 601 GRVSGGFGDKAMEILGSNSLECSINRQVTDVE 632

BLAST of CmoCh16G006560 vs. ExPASy TrEMBL
Match: A0A6J1EZB1 (AT-rich interactive domain-containing protein 2-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111437591 PE=4 SV=1)

HSP 1 Score: 1269.6 bits (3284), Expect = 0.0e+00
Identity = 632/695 (90.94%), Postives = 632/695 (90.94%), Query Frame = 0

Query: 1   MGRWHVSSNASILDCNKDVDPNPSNGCCIASDCLVERSYENVDYDDCKARIRCYFEKILW 60
           MGRWHVSSNASILDCNKDVDPNPSNGCCIASDCLVERSYENVDYDDCKARIRCYFEKILW
Sbjct: 1   MGRWHVSSNASILDCNKDVDPNPSNGCCIASDCLVERSYENVDYDDCKARIRCYFEKILW 60

Query: 61  VFLKEIGRRGFVRPLPALIGEGGALDLFELFLVVRDKGGSQVVSEKKLWSSVVVELGLDL 120
           VFLKEIGRRGFVRPLPALIGEGGALDLFELFLVVRDKGGSQVVSEKKLWSSVVVELGLDL
Sbjct: 61  VFLKEIGRRGFVRPLPALIGEGGALDLFELFLVVRDKGGSQVVSEKKLWSSVVVELGLDL 120

Query: 121 GLSASVKLIYSKYLSDLEKWLMVRCGDTKLENGSSDYCYKKSSPFLSELGAKINGMLYGV 180
           GLSASVKLIYSKYLSDLEKWLMVRCGDTKLENGSSDYCYKKSSPFLSELGAKINGMLYGV
Sbjct: 121 GLSASVKLIYSKYLSDLEKWLMVRCGDTKLENGSSDYCYKKSSPFLSELGAKINGMLYGV 180

Query: 181 PRQNSIYDECFGFKSNKQNGNVNVAAAAAVEKEIKFPEIKKKEHDLHGDVTSIQQDCTET 240
           PRQNSIYDECFGFKSNKQNGNVNVAAAAAVEKEIKFPEIKKKEHDLHGDVTSIQQDCTET
Sbjct: 181 PRQNSIYDECFGFKSNKQNGNVNVAAAAAVEKEIKFPEIKKKEHDLHGDVTSIQQDCTET 240

Query: 241 HPIHVIEDGQSLDAVNVEAEIESLGKYRESLLRMLKWVRKTAKHPEDPLNGTIPGTSRWK 300
           HPIHVIEDGQSLDAVNVEAEIESLGKYRESLLRMLKWVRKTAKHPEDPLNGTIPGTSRWK
Sbjct: 241 HPIHVIEDGQSLDAVNVEAEIESLGKYRESLLRMLKWVRKTAKHPEDPLNGTIPGTSRWK 300

Query: 301 GYSSDDALWLQVIRAKDALLIRKGVDKIAEKRLLIQ------------------------ 360
           GYSSDDALWLQVIRAKDALLIRKGVDKIAEKRLLIQ                        
Sbjct: 301 GYSSDDALWLQVIRAKDALLIRKGVDKIAEKRLLIQVLRSLAFFFRIESSDHNQRPFLSY 360

Query: 361 ---------------------------------------KKVKMHPSIYEDNIDNHHLST 420
                                                  KKVKMHPSIYEDNIDNHHLST
Sbjct: 361 IERESYLLLLEPWVSIIISKQHTTTVSLSCVLCDNMMDTKKVKMHPSIYEDNIDNHHLST 420

Query: 421 ERISCSKRSKALTESVLAPCSNSCPTVRSNCISSLTTEVGKGLKNQAVLNGDIPSEMEDD 480
           ERISCSKRSKALTESVLAPCSNSCPTVRSNCISSLTTEVGKGLKNQAVLNGDIPSEMEDD
Sbjct: 421 ERISCSKRSKALTESVLAPCSNSCPTVRSNCISSLTTEVGKGLKNQAVLNGDIPSEMEDD 480

Query: 481 HPNEDSAEETVPVGAVCQADLPEWTGNNSDSDSKWLGTRSWPLQHRNSNSVRDRRAIGRG 540
           HPNEDSAEETVPVGAVCQADLPEWTGNNSDSDSKWLGTRSWPLQHRNSNSVRDRRAIGRG
Sbjct: 481 HPNEDSAEETVPVGAVCQADLPEWTGNNSDSDSKWLGTRSWPLQHRNSNSVRDRRAIGRG 540

Query: 541 RPDSCGCQFPGSVECFRFHIAEARMRLKLELGSTFFAWRFHQMGEEISLQWTVEEEKRFK 600
           RPDSCGCQFPGSVECFRFHIAEARMRLKLELGSTFFAWRFHQMGEEISLQWTVEEEKRFK
Sbjct: 541 RPDSCGCQFPGSVECFRFHIAEARMRLKLELGSTFFAWRFHQMGEEISLQWTVEEEKRFK 600

Query: 601 ELAMSGFNNHNRCFWDYSLRWFPMKSRKNLISYYFNVFLLRLRSYQNRVTPNSIDSDDED 633
           ELAMSGFNNHNRCFWDYSLRWFPMKSRKNLISYYFNVFLLRLRSYQNRVTPNSIDSDDED
Sbjct: 601 ELAMSGFNNHNRCFWDYSLRWFPMKSRKNLISYYFNVFLLRLRSYQNRVTPNSIDSDDED 660

BLAST of CmoCh16G006560 vs. ExPASy TrEMBL
Match: A0A6J1J644 (AT-rich interactive domain-containing protein 2-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482924 PE=4 SV=1)

HSP 1 Score: 1242.6 bits (3214), Expect = 0.0e+00
Identity = 611/633 (96.52%), Postives = 614/633 (97.00%), Query Frame = 0

Query: 1   MGRWHVSSNASILDCNKDVDPNPSNGCCIASDCLVERSYENVDYDDCKARIRCYFEKILW 60
           MGRWHVSSNASILDCNKDVDPNPSNGCCIASDCLVE +Y NVDYDDCKARIRCYFEKILW
Sbjct: 1   MGRWHVSSNASILDCNKDVDPNPSNGCCIASDCLVEGTYANVDYDDCKARIRCYFEKILW 60

Query: 61  VFLKEIGRRGFVRPLPALIGEGGALDLFELFLVVRDKGGSQVVSEKKLWSSVVVELGLDL 120
           VFLKEIGRRGFVRPLPALIGEGGALDLFELFLVVRDKGGSQVVSEKKLWSSVVVELGLDL
Sbjct: 61  VFLKEIGRRGFVRPLPALIGEGGALDLFELFLVVRDKGGSQVVSEKKLWSSVVVELGLDL 120

Query: 121 GLSASVKLIYSKYLSDLEKWLMVRCGDTKLENGSSDYCYKKSSPFLSELGAKINGMLYGV 180
           GLSASVKLIYSKYLSDLEKWLMVRCGDTKLENGSSDYCYKKSSPFLSELGAKINGMLYGV
Sbjct: 121 GLSASVKLIYSKYLSDLEKWLMVRCGDTKLENGSSDYCYKKSSPFLSELGAKINGMLYGV 180

Query: 181 PRQNSIYDECFGFKSNKQNGNVNVAAAAAVEKEIKFPEIKKKEHDLHGDVTSIQQDCTET 240
           PRQNSIYDECFGFKSNKQNGNVNV AAAAVEKEIKF EIKKKEHDLHGDVT IQQDCTET
Sbjct: 181 PRQNSIYDECFGFKSNKQNGNVNV-AAAAVEKEIKFSEIKKKEHDLHGDVTPIQQDCTET 240

Query: 241 HPIHVIEDGQSLDAVNVEAEIESLGKYRESLLRMLKWVRKTAKHPEDPLNGTIPGTSRWK 300
           HPIHVIEDGQSLDAVNVEAEIESLGKYRESLLRMLKWVRKTAKHPEDPLNGTI G SRWK
Sbjct: 241 HPIHVIEDGQSLDAVNVEAEIESLGKYRESLLRMLKWVRKTAKHPEDPLNGTILGASRWK 300

Query: 301 GYSSDDALWLQVIRAKDALLIRKGVDKIAEKRLLIQKKVKMHPSIYEDNIDNHHLSTERI 360
           GYSSDDALWLQVI AKDALLIRKGVDKIAEKRLLIQKKVKMHPSIYEDNIDNH LSTERI
Sbjct: 301 GYSSDDALWLQVISAKDALLIRKGVDKIAEKRLLIQKKVKMHPSIYEDNIDNHRLSTERI 360

Query: 361 SCSKRSKALTESVLAPCSNSCPTVRSNCI-SSLTTEVGKGLKNQAVLNGDIPSEMEDDHP 420
           SCSKR KA TESV A CSNSCPTVRSNCI SSLTTEVGKGLKNQAVLNGDIPSEMEDDHP
Sbjct: 361 SCSKRFKASTESVFATCSNSCPTVRSNCISSSLTTEVGKGLKNQAVLNGDIPSEMEDDHP 420

Query: 421 NEDSAEETVPVGAVCQADLPEWTGNNSDSDSKWLGTRSWPLQHRNSNSVRDRRAIGRGRP 480
           NEDSAEETVPVGA+CQADLPEWTGNNSDSDSKWLGTR WPLQHRNSNSVRDRRAIGRGRP
Sbjct: 421 NEDSAEETVPVGALCQADLPEWTGNNSDSDSKWLGTRLWPLQHRNSNSVRDRRAIGRGRP 480

Query: 481 DSCGCQFPGSVECFRFHIAEARMRLKLELGSTFFAWRFHQMGEEISLQWTVEEEKRFKEL 540
           DSCGCQFPGSVECFRFHIAEARMRLKLELGSTFFAWRFHQMGEEISLQWT EEEKRFKEL
Sbjct: 481 DSCGCQFPGSVECFRFHIAEARMRLKLELGSTFFAWRFHQMGEEISLQWTAEEEKRFKEL 540

Query: 541 AMSGFNNHNRCFWDYSLRWFPMKSRKNLISYYFNVFLLRLRSYQNRVTPNSIDSDDEDFE 600
           AMS FNNHNRCFWDYSLRWFPMKSRKNLISYYFNVFLLRLRSYQNRVTPNSIDSDDEDFE
Sbjct: 541 AMSSFNNHNRCFWDYSLRWFPMKSRKNLISYYFNVFLLRLRSYQNRVTPNSIDSDDEDFE 600

Query: 601 FGRVSGGFGDKAMEILGSNSLECSINRQVTDVE 633
           FG VSGGFGDKAME+LGS SLECSINRQVTDVE
Sbjct: 601 FGCVSGGFGDKAMEVLGSKSLECSINRQVTDVE 632

BLAST of CmoCh16G006560 vs. ExPASy TrEMBL
Match: A0A6J1ETJ6 (AT-rich interactive domain-containing protein 2-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111437591 PE=4 SV=1)

HSP 1 Score: 1240.7 bits (3209), Expect = 0.0e+00
Identity = 621/695 (89.35%), Postives = 621/695 (89.35%), Query Frame = 0

Query: 1   MGRWHVSSNASILDCNKDVDPNPSNGCCIASDCLVERSYENVDYDDCKARIRCYFEKILW 60
           MGRWHVSSNASILDCNKDVDPNPSNGCCIASDCLVERSYENVDYDDCKARIRCYFEKILW
Sbjct: 1   MGRWHVSSNASILDCNKDVDPNPSNGCCIASDCLVERSYENVDYDDCKARIRCYFEKILW 60

Query: 61  VFLKEIGRRGFVRPLPALIGEGGALDLFELFLVVRDKGGSQVVSEKKLWSSVVVELGLDL 120
           VFLKEIGRRGFVRPLPALIGEGGALDLFELFLVVRDKGGSQVVSEKKLWSSVVVELGLDL
Sbjct: 61  VFLKEIGRRGFVRPLPALIGEGGALDLFELFLVVRDKGGSQVVSEKKLWSSVVVELGLDL 120

Query: 121 GLSASVKLIYSKYLSDLEKWLMVRCGDTKLENGSSDYCYKKSSPFLSELGAKINGMLYGV 180
           GLSASVKLIYSKYLSDLEKWLMVRCGDTKLENGSSDYCYKKSSPFLSELGAKINGMLYGV
Sbjct: 121 GLSASVKLIYSKYLSDLEKWLMVRCGDTKLENGSSDYCYKKSSPFLSELGAKINGMLYGV 180

Query: 181 PRQNSIYDECFGFKSNKQNGNVNVAAAAAVEKEIKFPEIKKKEHDLHGDVTSIQQDCTET 240
           PRQNSIYDECFGFKSNKQNGNVNVAAAAAVEKEIKFPEIKKKEHDLHGDVTSIQQDCTET
Sbjct: 181 PRQNSIYDECFGFKSNKQNGNVNVAAAAAVEKEIKFPEIKKKEHDLHGDVTSIQQDCTET 240

Query: 241 HPIHVIEDGQSLDAVNVEAEIESLGKYRESLLRMLKWVRKTAKHPEDPLNGTIPGTSRWK 300
           HPIHVI           EAEIESLGKYRESLLRMLKWVRKTAKHPEDPLNGTIPGTSRWK
Sbjct: 241 HPIHVI-----------EAEIESLGKYRESLLRMLKWVRKTAKHPEDPLNGTIPGTSRWK 300

Query: 301 GYSSDDALWLQVIRAKDALLIRKGVDKIAEKRLLIQ------------------------ 360
           GYSSDDALWLQVIRAKDALLIRKGVDKIAEKRLLIQ                        
Sbjct: 301 GYSSDDALWLQVIRAKDALLIRKGVDKIAEKRLLIQVLRSLAFFFRIESSDHNQRPFLSY 360

Query: 361 ---------------------------------------KKVKMHPSIYEDNIDNHHLST 420
                                                  KKVKMHPSIYEDNIDNHHLST
Sbjct: 361 IERESYLLLLEPWVSIIISKQHTTTVSLSCVLCDNMMDTKKVKMHPSIYEDNIDNHHLST 420

Query: 421 ERISCSKRSKALTESVLAPCSNSCPTVRSNCISSLTTEVGKGLKNQAVLNGDIPSEMEDD 480
           ERISCSKRSKALTESVLAPCSNSCPTVRSNCISSLTTEVGKGLKNQAVLNGDIPSEMEDD
Sbjct: 421 ERISCSKRSKALTESVLAPCSNSCPTVRSNCISSLTTEVGKGLKNQAVLNGDIPSEMEDD 480

Query: 481 HPNEDSAEETVPVGAVCQADLPEWTGNNSDSDSKWLGTRSWPLQHRNSNSVRDRRAIGRG 540
           HPNEDSAEETVPVGAVCQADLPEWTGNNSDSDSKWLGTRSWPLQHRNSNSVRDRRAIGRG
Sbjct: 481 HPNEDSAEETVPVGAVCQADLPEWTGNNSDSDSKWLGTRSWPLQHRNSNSVRDRRAIGRG 540

Query: 541 RPDSCGCQFPGSVECFRFHIAEARMRLKLELGSTFFAWRFHQMGEEISLQWTVEEEKRFK 600
           RPDSCGCQFPGSVECFRFHIAEARMRLKLELGSTFFAWRFHQMGEEISLQWTVEEEKRFK
Sbjct: 541 RPDSCGCQFPGSVECFRFHIAEARMRLKLELGSTFFAWRFHQMGEEISLQWTVEEEKRFK 600

Query: 601 ELAMSGFNNHNRCFWDYSLRWFPMKSRKNLISYYFNVFLLRLRSYQNRVTPNSIDSDDED 633
           ELAMSGFNNHNRCFWDYSLRWFPMKSRKNLISYYFNVFLLRLRSYQNRVTPNSIDSDDED
Sbjct: 601 ELAMSGFNNHNRCFWDYSLRWFPMKSRKNLISYYFNVFLLRLRSYQNRVTPNSIDSDDED 660

BLAST of CmoCh16G006560 vs. ExPASy TrEMBL
Match: A0A6J1J301 (AT-rich interactive domain-containing protein 2-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111482924 PE=4 SV=1)

HSP 1 Score: 1213.7 bits (3139), Expect = 0.0e+00
Identity = 600/633 (94.79%), Postives = 603/633 (95.26%), Query Frame = 0

Query: 1   MGRWHVSSNASILDCNKDVDPNPSNGCCIASDCLVERSYENVDYDDCKARIRCYFEKILW 60
           MGRWHVSSNASILDCNKDVDPNPSNGCCIASDCLVE +Y NVDYDDCKARIRCYFEKILW
Sbjct: 1   MGRWHVSSNASILDCNKDVDPNPSNGCCIASDCLVEGTYANVDYDDCKARIRCYFEKILW 60

Query: 61  VFLKEIGRRGFVRPLPALIGEGGALDLFELFLVVRDKGGSQVVSEKKLWSSVVVELGLDL 120
           VFLKEIGRRGFVRPLPALIGEGGALDLFELFLVVRDKGGSQVVSEKKLWSSVVVELGLDL
Sbjct: 61  VFLKEIGRRGFVRPLPALIGEGGALDLFELFLVVRDKGGSQVVSEKKLWSSVVVELGLDL 120

Query: 121 GLSASVKLIYSKYLSDLEKWLMVRCGDTKLENGSSDYCYKKSSPFLSELGAKINGMLYGV 180
           GLSASVKLIYSKYLSDLEKWLMVRCGDTKLENGSSDYCYKKSSPFLSELGAKINGMLYGV
Sbjct: 121 GLSASVKLIYSKYLSDLEKWLMVRCGDTKLENGSSDYCYKKSSPFLSELGAKINGMLYGV 180

Query: 181 PRQNSIYDECFGFKSNKQNGNVNVAAAAAVEKEIKFPEIKKKEHDLHGDVTSIQQDCTET 240
           PRQNSIYDECFGFKSNKQNGNVNV AAAAVEKEIKF EIKKKEHDLHGDVT IQQDCTET
Sbjct: 181 PRQNSIYDECFGFKSNKQNGNVNV-AAAAVEKEIKFSEIKKKEHDLHGDVTPIQQDCTET 240

Query: 241 HPIHVIEDGQSLDAVNVEAEIESLGKYRESLLRMLKWVRKTAKHPEDPLNGTIPGTSRWK 300
           HPIHVI           EAEIESLGKYRESLLRMLKWVRKTAKHPEDPLNGTI G SRWK
Sbjct: 241 HPIHVI-----------EAEIESLGKYRESLLRMLKWVRKTAKHPEDPLNGTILGASRWK 300

Query: 301 GYSSDDALWLQVIRAKDALLIRKGVDKIAEKRLLIQKKVKMHPSIYEDNIDNHHLSTERI 360
           GYSSDDALWLQVI AKDALLIRKGVDKIAEKRLLIQKKVKMHPSIYEDNIDNH LSTERI
Sbjct: 301 GYSSDDALWLQVISAKDALLIRKGVDKIAEKRLLIQKKVKMHPSIYEDNIDNHRLSTERI 360

Query: 361 SCSKRSKALTESVLAPCSNSCPTVRSNCI-SSLTTEVGKGLKNQAVLNGDIPSEMEDDHP 420
           SCSKR KA TESV A CSNSCPTVRSNCI SSLTTEVGKGLKNQAVLNGDIPSEMEDDHP
Sbjct: 361 SCSKRFKASTESVFATCSNSCPTVRSNCISSSLTTEVGKGLKNQAVLNGDIPSEMEDDHP 420

Query: 421 NEDSAEETVPVGAVCQADLPEWTGNNSDSDSKWLGTRSWPLQHRNSNSVRDRRAIGRGRP 480
           NEDSAEETVPVGA+CQADLPEWTGNNSDSDSKWLGTR WPLQHRNSNSVRDRRAIGRGRP
Sbjct: 421 NEDSAEETVPVGALCQADLPEWTGNNSDSDSKWLGTRLWPLQHRNSNSVRDRRAIGRGRP 480

Query: 481 DSCGCQFPGSVECFRFHIAEARMRLKLELGSTFFAWRFHQMGEEISLQWTVEEEKRFKEL 540
           DSCGCQFPGSVECFRFHIAEARMRLKLELGSTFFAWRFHQMGEEISLQWT EEEKRFKEL
Sbjct: 481 DSCGCQFPGSVECFRFHIAEARMRLKLELGSTFFAWRFHQMGEEISLQWTAEEEKRFKEL 540

Query: 541 AMSGFNNHNRCFWDYSLRWFPMKSRKNLISYYFNVFLLRLRSYQNRVTPNSIDSDDEDFE 600
           AMS FNNHNRCFWDYSLRWFPMKSRKNLISYYFNVFLLRLRSYQNRVTPNSIDSDDEDFE
Sbjct: 541 AMSSFNNHNRCFWDYSLRWFPMKSRKNLISYYFNVFLLRLRSYQNRVTPNSIDSDDEDFE 600

Query: 601 FGRVSGGFGDKAMEILGSNSLECSINRQVTDVE 633
           FG VSGGFGDKAME+LGS SLECSINRQVTDVE
Sbjct: 601 FGCVSGGFGDKAMEVLGSKSLECSINRQVTDVE 621

BLAST of CmoCh16G006560 vs. TAIR 10
Match: AT4G11400.1 (ARID/BRIGHT DNA-binding domain;ELM2 domain protein )

HSP 1 Score: 335.9 bits (860), Expect = 7.1e-92
Identity = 232/609 (38.10%), Postives = 319/609 (52.38%), Query Frame = 0

Query: 38  SYENVD---YDDCKARIRCYFEKILWVFLKEIGRRGFVRPLPALIGEGGALDLFELFLVV 97
           SY +V+    D+C+ R+R  F++ L VFL+E    G ++PLPA+IG+G  +DLF+LF++V
Sbjct: 10  SYVDVEIKYVDECEERLRRLFDQALLVFLEE---EGSIKPLPAVIGDGKNVDLFKLFVLV 69

Query: 98  RDKGGSQVVSEKKLWSSVVVELGLDLGLSASVKLIYSKYLSDLEKWLMVRCGDTKLENGS 157
           R++ G   VS K+LW  V  +LG D  L  S+ LIY KYL+ +EKW +        +N  
Sbjct: 70  REREGFDTVSRKRLWEVVAEKLGFDCSLVPSLILIYLKYLNRMEKWAVEESRIVNWDNKD 129

Query: 158 SDY--CYKKSSPFLSELGAKINGMLYGVPRQNSIYDECFGFKSNKQNGNVNVAAAAAVEK 217
           S+   CY   S  L ELG   NG         S+ D     K  K+N  V        E 
Sbjct: 130 SEKKGCY---SGMLHELG---NGF-------KSLLD---NGKCQKRNRAVAFGCNHMEES 189

Query: 218 EIKFPEIKKKEHDLHGDVTSIQQDCTETHPIHVIEDGQSLDAVNVEAEIESLGKYRESLL 277
             +F   +K+  +   D   +           VI +   + AV       SL K R+ L 
Sbjct: 190 CSEFDRSRKRFRESDDDDKGVGLSSV------VIREETVVCAVEEGLSDFSLEK-RDDLP 249

Query: 278 RMLKWVRKTAKHPEDPLNGTIPGTSRWKGYSSDDALWLQVIRAKDALLIRKGVDKIAEKR 337
            MLKW+   A  P DP  G IP +S+WK Y+ +   WLQV RAK++LL+++   ++  + 
Sbjct: 250 GMLKWLALVATSPHDPAIGVIPHSSKWKQYNGNKC-WLQVARAKNSLLVQRDNAELRYRY 309

Query: 338 LLIQKKVKM-HPSIYEDNIDNHHLSTERISCSKRSKALTESVLAPCSNSCPTVRSNCISS 397
              +    + HPS+YED+      S  R+  S R   L++     CS+SC      C  S
Sbjct: 310 HPFRGHQNIHHPSMYEDD----RKSIGRLRYSIRPPNLSKH----CSSSC------CNGS 369

Query: 398 LTTEVGKGLKNQAVLNGDIPSEMEDDHPNEDSAEE---------TVPVGAVCQADLPEWT 457
               + K    +      I SE          A +          + VG   QA + EWT
Sbjct: 370 SLVSLSKSRSTKCRKLTIIASERAGLTAGTSRARKRNKAEIPRRCIKVGHQHQAQVDEWT 429

Query: 458 GNNSDSDSKWLGTRSWPLQHRNS-NSVRDRRAIGRGRPDSCGCQFPGSVECFRFHIAEAR 517
            +  DSDSKWLGTR WP ++  + +       +G+GRPDSC C+  G VEC R HIAE R
Sbjct: 430 ESGVDSDSKWLGTRIWPPENSEALDQTLGNDLVGKGRPDSCSCELSGFVECTRLHIAEKR 489

Query: 518 MRLKLELGSTFFAWRFHQMGEEISLQWTVEEEKRFKELAMSGFNNHNRCFWDYSLRWFPM 577
           M LK ELG  FF WRF+QMGEE+ L+WT EEEKRFK++ ++      + FW  + + FP 
Sbjct: 490 MELKRELGDDFFHWRFNQMGEEVCLRWTEEEEKRFKDMIIA----DPQSFWTNAAKNFPK 549

Query: 578 KSRKNLISYYFNVFLLRLRSYQNRVTPNSIDSDDEDFEFGRVSGGFGDKAMEILGSNSLE 631
           K R+ L+SYYFNVFL+  R YQNRVTP SIDSDDE   FG V G FG  A+   GS+ + 
Sbjct: 550 KKREELVSYYFNVFLINRRRYQNRVTPKSIDSDDEG-AFGSVGGSFGRDAVTSSGSDVMI 572

BLAST of CmoCh16G006560 vs. TAIR 10
Match: AT2G46040.1 (ARID/BRIGHT DNA-binding domain;ELM2 domain protein )

HSP 1 Score: 253.4 bits (646), Expect = 4.6e-67
Identity = 194/551 (35.21%), Postives = 257/551 (46.64%), Query Frame = 0

Query: 55  FEKILWVFLKEIGRRGFVRPLPALIGEGGALDLFELFLVVRDKGGSQVVSEKKLWSSVVV 114
           F  +L  FL E        PLPA+ GEG  +DLF LFL V  KGG   VSE   W  VV 
Sbjct: 49  FRPLLDSFLAEFCSADGFLPLPAMTGEGRTVDLFNLFLNVTHKGGFDAVSENGSWDEVVQ 108

Query: 115 ELGLDLGLSASVKLIYSKYLSDLEKWL-MVRCGDTKLE----NGSSDYCYKKSSPFLSEL 174
           E GL+   SAS KLIY KYL    +WL  V  GDT +     +G SD    + + FLSE+
Sbjct: 109 ESGLESYDSASAKLIYVKYLDAFGRWLNRVVAGDTDVSSVELSGISDALVARLNGFLSEV 168

Query: 175 GAKINGMLYGVPRQNSIYDECFGFKSNKQNGNVNVAAAAAVEKEIK-FPEIKKKEHDLHG 234
             K         ++     + F  K+ ++    +V   +A    +K F   K  E  L  
Sbjct: 169 KKKYELRKGRPAKELGAELKWFISKTKRRYDKHHVGKESASNDAVKEFQGSKLAERRL-- 228

Query: 235 DVTSIQQDCTETHPIHVIEDGQSLDAVNVEAEIESLGK-YRESLLRMLKWVRKTAKHPED 294
                         I ++E        +V  E  S GK  RE  L  LKW+   AK P D
Sbjct: 229 ------------EQIMILE--------SVTQECSSPGKRKRECPLETLKWLSDVAKDPCD 288

Query: 295 PLNGTIPGTSRWKGYSSDDALWLQVIRAKDALLIRKGVDKIAEKRLLIQKKVKMHPSIYE 354
           P  G +P  S W  Y S++  W Q++  + +   R   D   EK    QK  KMHP +Y+
Sbjct: 289 PSLGIVPDRSEWVSYGSEEP-WKQLLLFRAS---RTNNDSACEKTW--QKVQKMHPCLYD 348

Query: 355 DNIDNHHLSTERISCSKRSKALTESVLAPCSNSCPTVRSNCISSLTTEVGKGLKNQAVLN 414
           D+    +   ER+S     +  T                          G G        
Sbjct: 349 DSAGASYNLRERLSYEDYKRGKT--------------------------GNG-------- 408

Query: 415 GDIPSEMEDDHPNEDSAEETVPVGAVCQADLPEWTGNNSDSDSKWLGTRSWPL--QHRNS 474
            DI S  E+D P          VG+  QA +PEWTG   +SDSKWLGTR WPL  +   +
Sbjct: 409 SDIGSSDEEDRP-------CALVGSKFQAKVPEWTGITPESDSKWLGTRIWPLTKEQTKA 468

Query: 475 NSVRDRRAIGRGRPDSCGCQFPGSVECFRFHIAEARMRLKLELGSTFFAWRFHQMGEEIS 534
           N + +R  IG+GR D CGC  PGS+EC +FHI   R +LKLELG  F+ W F  MGE   
Sbjct: 469 NLLIERDRIGKGRQDPCGCHNPGSIECVKFHITAKRDKLKLELGPAFYMWCFDVMGECTL 528

Query: 535 LQWTVEEEKRFKELAMSGFNNHNRCFWDYSLRWFPMKSRKNLISYYFNVFLLRLRSYQNR 594
             WT  E K+ K L MS   + +  F   +    P KSR  ++SY++NV LL+ R+ Q+R
Sbjct: 529 QYWTDLELKKIKSL-MSSPPSLSPAFIHQAKMILPSKSRGKIVSYFYNVTLLQYRASQSR 529

Query: 595 VTPNSIDSDDE 597
           +TP+ IDSD +
Sbjct: 589 ITPHDIDSDTD 529

BLAST of CmoCh16G006560 vs. TAIR 10
Match: AT5G04110.1 (DNA GYRASE B3 )

HSP 1 Score: 128.6 bits (322), Expect = 1.7e-29
Identity = 72/206 (34.95%), Postives = 112/206 (54.37%), Query Frame = 0

Query: 407 NGDIPSEMEDD--HPNEDSAEETVPVGAVCQADLPEWT---------GNNSDSDS-KWLG 466
           N D+ ++   D      +     +P+G   QA++P W          G+  DS++ +WLG
Sbjct: 338 NKDVSNKTSKDVITHGSNKTRPAIPIGPRFQAEIPVWIAPTKKGKFYGSPGDSNTLRWLG 397

Query: 467 TRSWPLQHRNSNSVRDRRAIGRGRPDSCGCQFPGSVECFRFHIAEARMRLKLELGSTFFA 526
           T  WP  +    +V  ++ +G GR DSC C  P S  C + H  EA+  L+ E+   F  
Sbjct: 398 TGVWP-TYSLKKTVHSKK-VGEGRSDSCSCASPRSTNCIKRHKKEAQELLEKEINRAFST 457

Query: 527 WRFHQMGEEISLQ-WTVEEEKRFKELAMSGFNNHNRCFWDYSLRWFPMKSRKNLISYYFN 586
           W F QMGEEI L+ WT +EE+RF+ L      + +  FW+++   FP KS+K+L+SYY+N
Sbjct: 458 WEFDQMGEEIVLKSWTAKEERRFEALVKKNPLSSSDGFWEFASNAFPQKSKKDLLSYYYN 517

Query: 587 VFLLRLRSYQNRVTPNSIDSDDEDFE 600
           VFL++          N+IDSDD+ ++
Sbjct: 518 VFLIKRMRLLKSSAANNIDSDDDHYD 541

BLAST of CmoCh16G006560 vs. TAIR 10
Match: AT2G03470.1 (ELM2 domain-containing protein )

HSP 1 Score: 97.4 bits (241), Expect = 4.3e-20
Identity = 81/273 (29.67%), Postives = 120/273 (43.96%), Query Frame = 0

Query: 346 YEDNIDNHHLSTERISCSKRSKALTESVLAPCSNSCPTVRSNCISSLTTEVG-------K 405
           +++ I  HH S E     K++  L E ++  C N   T  +N +       G        
Sbjct: 31  FDEAIPYHHASME-----KKTNVLVEDLIGLCENPTWTNDANHVDKGFETTGLCQEDSQS 90

Query: 406 GLKNQAVLNGDIPSEMEDDHPNED--------SAEETVPVGAVCQADLPEWTGNN--SDS 465
           G+  Q+ L+           P ED           + V VG+  QAD+PE+        S
Sbjct: 91  GVTTQSDLSHQSSGSDFTWKPVEDVYTCLMNQPPRKQVLVGSNHQADIPEFVKEEILDQS 150

Query: 466 DSKWLGTRSWPLQHRNSNSVRDRRAIGRGR-PDSCGCQFPGSVECFRFHIAEARMRLKLE 525
           +++        L  +    + D    G G+    C C   GS+ C R HI EAR  L   
Sbjct: 151 EARTKEDLEGKLMRKCVIPMSDSDLCGTGQGRKECLCLDKGSIRCVRRHIIEARESLVET 210

Query: 526 LG-STFFAWRFHQMGEEISLQWTVEEEKRFKELAMSGFNNHNRCFWDYSLRWFPMKSRKN 585
           +G   F      +MGEE++  WT EEE  F ++  S   +  R FW      FP ++ K 
Sbjct: 211 IGYERFMELGLCEMGEEVASLWTEEEEDLFHKVVYSNPFSAGRDFWKQLKGTFPSRTMKE 270

Query: 586 LISYYFNVFLLRLRSYQNRVTPNSIDSDDEDFE 600
           L+SYYFNVF+LR R  QNR     +DSDD++++
Sbjct: 271 LVSYYFNVFILRRRGIQNRFKALDVDSDDDEWQ 298

BLAST of CmoCh16G006560 vs. TAIR 10
Match: AT2G03470.2 (ELM2 domain-containing protein )

HSP 1 Score: 93.2 bits (230), Expect = 8.0e-19
Identity = 81/273 (29.67%), Postives = 120/273 (43.96%), Query Frame = 0

Query: 346 YEDNIDNHHLSTERISCSKRSKALTESVLAPCSNSCPTVRSNCISSLTTEVG-------K 405
           +++ I  HH S E     K++  L E ++  C N   T  +N +       G        
Sbjct: 31  FDEAIPYHHASME-----KKTNVL-EDLIGLCENPTWTNDANHVDKGFETTGLCQEDSQS 90

Query: 406 GLKNQAVLNGDIPSEMEDDHPNED--------SAEETVPVGAVCQADLPEWTGNN--SDS 465
           G+  Q+ L+           P ED           + V VG+  QAD+PE+        S
Sbjct: 91  GVTTQSDLSHQSSGSDFTWKPVEDVYTCLMNQPPRKQVLVGSNHQADIPEFVKEEILDQS 150

Query: 466 DSKWLGTRSWPLQHRNSNSVRDRRAIGRGR-PDSCGCQFPGSVECFRFHIAEARMRLKLE 525
           +++        L  +    + D    G G+    C C   GS+ C R HI EAR  L   
Sbjct: 151 EARTKEDLEGKLMRKCVIPMSDSDLCGTGQGRKECLCLDKGSIRCVRRHIIEARESLVET 210

Query: 526 LG-STFFAWRFHQMGEEISLQWTVEEEKRFKELAMSGFNNHNRCFWDYSLRWFPMKSRKN 585
           +G   F      +MGEE++  WT EEE  F ++  S   +  R FW      FP ++ K 
Sbjct: 211 IGYERFMELGLCEMGEEVASLWTEEEEDLFHKVVYSNPFSAGRDFWKQLKGTFPSRTMKE 270

Query: 586 LISYYFNVFLLRLRSYQNRVTPNSIDSDDEDFE 600
           L+SYYFNVF+LR R  QNR     +DSDD++++
Sbjct: 271 LVSYYFNVFILRRRGIQNRFKALDVDSDDDEWQ 297

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9LDD41.0e-9038.10AT-rich interactive domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 ... [more]
Q84JT76.5e-6635.21AT-rich interactive domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 ... [more]
Match NameE-valueIdentityDescription
A0A6J1ETI20.0e+00100.00AT-rich interactive domain-containing protein 2-like isoform X3 OS=Cucurbita mos... [more]
A0A6J1EZB10.0e+0090.94AT-rich interactive domain-containing protein 2-like isoform X1 OS=Cucurbita mos... [more]
A0A6J1J6440.0e+0096.52AT-rich interactive domain-containing protein 2-like isoform X1 OS=Cucurbita max... [more]
A0A6J1ETJ60.0e+0089.35AT-rich interactive domain-containing protein 2-like isoform X2 OS=Cucurbita mos... [more]
A0A6J1J3010.0e+0094.79AT-rich interactive domain-containing protein 2-like isoform X2 OS=Cucurbita max... [more]
Match NameE-valueIdentityDescription
AT4G11400.17.1e-9238.10ARID/BRIGHT DNA-binding domain;ELM2 domain protein [more]
AT2G46040.14.6e-6735.21ARID/BRIGHT DNA-binding domain;ELM2 domain protein [more]
AT5G04110.11.7e-2934.95DNA GYRASE B3 [more]
AT2G03470.14.3e-2029.67ELM2 domain-containing protein [more]
AT2G03470.28.0e-1929.67ELM2 domain-containing protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM01014ARID_2coord: 46..138
e-value: 3.1E-6
score: 36.7
NoneNo IPR availablePANTHERPTHR46410:SF2AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2coord: 1..631
NoneNo IPR availablePANTHERPTHR46410AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2coord: 1..631
NoneNo IPR availableCDDcd16100ARIDcoord: 55..138
e-value: 1.4169E-14
score: 67.3828
IPR001606ARID DNA-binding domainSMARTSM00501bright_3coord: 49..143
e-value: 2.2E-11
score: 53.9
IPR001606ARID DNA-binding domainPFAMPF01388ARIDcoord: 69..138
e-value: 9.3E-8
score: 32.6
IPR001606ARID DNA-binding domainPROSITEPS51011ARIDcoord: 49..142
score: 17.33604
IPR036431ARID DNA-binding domain superfamilyGENE3D1.10.150.60coord: 40..149
e-value: 2.5E-13
score: 51.5
IPR036431ARID DNA-binding domain superfamilySUPERFAMILY46774ARID-likecoord: 50..142

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh16G006560.1CmoCh16G006560.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003677 DNA binding