CmoCh16G006470 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh16G006470
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	B3 domain-containing protein Os03g0120900-like
Location	Cmo_Chr16: 3189084 .. 3190016 (-)
RNA-Seq Expression	CmoCh16G006470
Synteny	CmoCh16G006470

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGAGTCTTCTAATTCTGGTGTTTATATAGAGAAAGAGCATATGTTCGACAAGGTTGTGACTCCAAGCGATGTGGGAAAATTGAATCGTTTAGTGATCCCTAAACAACATGCTGAAAAGTTCTTCCCTTTGGATTCTTCATCAACCGAAAAGGGTCTTCTTTTAAGCTTTGAAGATCGCTGTGGTAAGCTATGGCGGTTTCGTTACTCTTACTGGACTAGCAGCCAAAGCTATGTGATGACTAAAGGTTGGAGCCGCTTTGTTAAAGAGAAACGACTTGATGCTGGTGATATTGTCTCCTTTCAAAGAGGGGTTTGTAAAGATCGGTTTTTTATTGATTGGCGGCGCCGCCCTCCTCACACGGCGGTGGAGACAGCTTTTCATCACCATGGTGGTGGTGGTTGTGGCGGTGGTGGTGGTGGTTATGGTGGTGGTGGACAATTTCCGCCTTACCAATTTCAGCTTCACGGCCAGTGGAATCCAGTGGCCACACCCTTATCTTTACACAGGGACCACGCCTTCCACTTGCAGCAGAATAATAGTGTTCATAATAATGTCAGCCTATTTCATACCACCTATAATCATCAACCGATCGGAGGCGGTGGTTGTGACGGTGGGGCGTCGGTCTTTTACGAATTGAGATCCCCGGCAGCACTGCCGGGAGTCGACGACGGTGGCGGTCATGGAATTGGGAAAGCTGCTGCAGCTAAGACATTGAGGCTATTTGGTGTCAATATGGAATGTGTAGTATCTGAAGATTCCGATGACGACGAGGGCGACAAAGTAACAACCTCGACTTCGACAACGTTGTCATCTCAATTCTGTGTTTATAACGGAATGCCGATGTCGATGTCGATGCCGACGAGCAATCCCGACGTACCGATCACCGACTTTTTCGAAAAAGGGAAGTCGTTAGATTTTGGCACTTGA

mRNA sequence

ATGGAAGAGTCTTCTAATTCTGGTGTTTATATAGAGAAAGAGCATATGTTCGACAAGGTTGTGACTCCAAGCGATGTGGGAAAATTGAATCGTTTAGTGATCCCTAAACAACATGCTGAAAAGTTCTTCCCTTTGGATTCTTCATCAACCGAAAAGGGTCTTCTTTTAAGCTTTGAAGATCGCTGTGGTAAGCTATGGCGGTTTCGTTACTCTTACTGGACTAGCAGCCAAAGCTATGTGATGACTAAAGGTTGGAGCCGCTTTGTTAAAGAGAAACGACTTGATGCTGGTGATATTGTCTCCTTTCAAAGAGGGGTTTGTAAAGATCGGTTTTTTATTGATTGGCGGCGCCGCCCTCCTCACACGGCGGTGGAGACAGCTTTTCATCACCATGGTGGTGGTGGTTGTGGCGGTGGTGGTGGTGGTTATGGTGGTGGTGGACAATTTCCGCCTTACCAATTTCAGCTTCACGGCCAGTGGAATCCAGTGGCCACACCCTTATCTTTACACAGGGACCACGCCTTCCACTTGCAGCAGAATAATAGTGTTCATAATAATGTCAGCCTATTTCATACCACCTATAATCATCAACCGATCGGAGGCGGTGGTTGTGACGGTGGGGCGTCGGTCTTTTACGAATTGAGATCCCCGGCAGCACTGCCGGGAGTCGACGACGGTGGCGGTCATGGAATTGGGAAAGCTGCTGCAGCTAAGACATTGAGGCTATTTGGTGTCAATATGGAATGTGTAGTATCTGAAGATTCCGATGACGACGAGGGCGACAAAGTAACAACCTCGACTTCGACAACGTTGTCATCTCAATTCTGTGTTTATAACGGAATGCCGATGTCGATGTCGATGCCGACGAGCAATCCCGACGTACCGATCACCGACTTTTTCGAAAAAGGGAAGTCGTTAGATTTTGGCACTTGA

Coding sequence (CDS)

ATGGAAGAGTCTTCTAATTCTGGTGTTTATATAGAGAAAGAGCATATGTTCGACAAGGTTGTGACTCCAAGCGATGTGGGAAAATTGAATCGTTTAGTGATCCCTAAACAACATGCTGAAAAGTTCTTCCCTTTGGATTCTTCATCAACCGAAAAGGGTCTTCTTTTAAGCTTTGAAGATCGCTGTGGTAAGCTATGGCGGTTTCGTTACTCTTACTGGACTAGCAGCCAAAGCTATGTGATGACTAAAGGTTGGAGCCGCTTTGTTAAAGAGAAACGACTTGATGCTGGTGATATTGTCTCCTTTCAAAGAGGGGTTTGTAAAGATCGGTTTTTTATTGATTGGCGGCGCCGCCCTCCTCACACGGCGGTGGAGACAGCTTTTCATCACCATGGTGGTGGTGGTTGTGGCGGTGGTGGTGGTGGTTATGGTGGTGGTGGACAATTTCCGCCTTACCAATTTCAGCTTCACGGCCAGTGGAATCCAGTGGCCACACCCTTATCTTTACACAGGGACCACGCCTTCCACTTGCAGCAGAATAATAGTGTTCATAATAATGTCAGCCTATTTCATACCACCTATAATCATCAACCGATCGGAGGCGGTGGTTGTGACGGTGGGGCGTCGGTCTTTTACGAATTGAGATCCCCGGCAGCACTGCCGGGAGTCGACGACGGTGGCGGTCATGGAATTGGGAAAGCTGCTGCAGCTAAGACATTGAGGCTATTTGGTGTCAATATGGAATGTGTAGTATCTGAAGATTCCGATGACGACGAGGGCGACAAAGTAACAACCTCGACTTCGACAACGTTGTCATCTCAATTCTGTGTTTATAACGGAATGCCGATGTCGATGTCGATGCCGACGAGCAATCCCGACGTACCGATCACCGACTTTTTCGAAAAAGGGAAGTCGTTAGATTTTGGCACTTGA

Protein sequence

MEESSNSGVYIEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKFFPLDSSSTEKGLLLSFEDRCGKLWRFRYSYWTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGVCKDRFFIDWRRRPPHTAVETAFHHHGGGGCGGGGGGYGGGGQFPPYQFQLHGQWNPVATPLSLHRDHAFHLQQNNSVHNNVSLFHTTYNHQPIGGGGCDGGASVFYELRSPAALPGVDDGGGHGIGKAAAAKTLRLFGVNMECVVSEDSDDDEGDKVTTSTSTTLSSQFCVYNGMPMSMSMPTSNPDVPITDFFEKGKSLDFGT

Homology

[Close]

BLAST of CmoCh16G006470 vs. ExPASy Swiss-Prot
Match: Q8LMR9 (B3 domain-containing protein Os03g0120900 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0120900 PE=2 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 1.1e-50
Identity = 130/278 (46.76%), Postives = 149/278 (53.60%), Query Frame = 0


Query: 2   EESSNSGVYIEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKFFPLDSSSTEKGLLLSFEDR 61
           E    S   +EKEHMFDKVVTPSDVGKLNRLVIPKQHAEK+FPLD++S EKGLLLSFEDR
Sbjct: 22  ESGGRSLAAVEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDAASNEKGLLLSFEDR 81

Query: 62  CGKLWRFRYSYWTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGV---CKDRFFIDWRRR 121
            GK WRFRYSYW SSQSYVMTKGWSRFVKEKRLDAGD VSF RGV    + R FIDWRRR
Sbjct: 82  TGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFGRGVGEAARGRLFIDWRRR 141

Query: 122 PP--------------HTAVETAF----HHHGGGGCGGGGGGYGGGGQFPPYQFQLHGQW 181
           P               H      F    HHHG G         G     PP    ++   
Sbjct: 142 PDVVAALQPPTHRFAHHLPSSIPFAPWAHHHGHGAAAAAAAAAGARFLLPPSSTPIYDH- 201

Query: 182 NPVATPLSLHRDHAFHLQQN--NSVHNNVSLFHTTYNHQPIGGGGCDGGASVFYELRSPA 241
                    HR HA  +  +   +  +   LF+     Q               +   PA
Sbjct: 202 ---------HRRHAHAVGYDAYAAATSRQVLFYRPLPPQ---------------QQHHPA 261

Query: 242 AL---PGVDDGGGHGIGKAAAAKTLRLFGVNMECVVSE 254
            +     V    GH    +A +K +RLFGVN++C  SE
Sbjct: 262 VVLESVPVRMTAGHAEPPSAPSKRVRLFGVNLDCANSE 274

[Close]

BLAST of CmoCh16G006470 vs. ExPASy Swiss-Prot
Match: Q7F9W2 (B3 domain-containing protein Os04g0581400 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0581400 PE=3 SV=2)

HSP 1 Score: 196.8 bits (499), Expect = 3.6e-49
Identity = 102/139 (73.38%), Postives = 107/139 (76.98%), Query Frame = 0


Query: 11  IEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKFFPLDSSSTEKGLLLSFEDRCGKLWRFRY 70
           IEKEHMFDKVVTPSDVGKLNRLVIPKQHAEK+FPLDS++ EKGLLLSFEDR GKLWRFRY
Sbjct: 104 IEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSAANEKGLLLSFEDRTGKLWRFRY 163

Query: 71  SYWTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGVC---KDRFFIDWRR----RPPHTA 130
           SYW SSQSYVMTKGWSRFVKEKRLDAGD VSF RG     +DR FIDW+R    R PH  
Sbjct: 164 SYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRGAAEATRDRLFIDWKRRADVRDPHRF 223

Query: 131 VETAFHHHGGGGCGGGGGG 143
                      G  GGG G
Sbjct: 224 QRLPLPMTSPYGPWGGGAG 242

[Close]

BLAST of CmoCh16G006470 vs. ExPASy Swiss-Prot
Match: O82799 (B3 domain-containing transcription factor NGA1 OS=Arabidopsis thaliana OX=3702 GN=NGA1 PE=1 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 4.6e-49
Identity = 103/164 (62.80%), Postives = 111/164 (67.68%), Query Frame = 0


Query: 1   MEESSNSGVYIEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKFFPLDSSSTEKGLLLSFED 60
           + E   +    ++EHMFDKVVTPSDVGKLNRLVIPKQHAE+FFPLDSSS EKGLLL+FED
Sbjct: 19  LAEEEGAREVADREHMFDKVVTPSDVGKLNRLVIPKQHAERFFPLDSSSNEKGLLLNFED 78

Query: 61  RCGKLWRFRYSYWTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGV----CKDRFFIDWR 120
             GK WRFRYSYW SSQSYVMTKGWSRFVK+K+LDAGDIVSFQR V       R FIDWR
Sbjct: 79  LTGKSWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRCVGDSGRDSRLFIDWR 138

Query: 121 RRP-----PHTAVETAF--------------------HHHGGGG 136
           RRP     PH A    F                    HHH GGG
Sbjct: 139 RRPKVPDHPHFAAGAMFPRFYSFPSTNYSLYNHQQQRHHHSGGG 182

[Close]

BLAST of CmoCh16G006470 vs. ExPASy Swiss-Prot
Match: Q9MAN1 (B3 domain-containing transcription factor NGA3 OS=Arabidopsis thaliana OX=3702 GN=NGA3 PE=1 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 3.0e-48
Identity = 132/320 (41.25%), Postives = 164/320 (51.25%), Query Frame = 0


Query: 12  EKEHMFDKVVTPSDVGKLNRLVIPKQHAEKFFPLDSSSTEKGLLLSFEDRCGKLWRFRYS 71
           EKEHMFDKVVTPSDVGKLNRLVIPKQHAE++FPLDSS+ + G LL+F+DR GK+WRFRYS
Sbjct: 51  EKEHMFDKVVTPSDVGKLNRLVIPKQHAERYFPLDSSNNQNGTLLNFQDRNGKMWRFRYS 110

Query: 72  YWTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGVC----KDRFFIDWRRRPPHTAVETA 131
           YW SSQSYVMTKGWSRFVKEK+LDAGDIVSFQRG+     + + +IDWR RP  + V+  
Sbjct: 111 YWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGIGDESERSKLYIDWRHRPDMSLVQA- 170

Query: 132 FHHHGGGGCGGGGGGYGGGGQFPPYQFQLHGQWNPVATPLSLHRDHAFHLQQNNSVHNNV 191
            H  G  G                + F    Q++    PL  +     H   N  + N+ 
Sbjct: 171 -HQFGNFGFN--------------FNFPTTSQYSNRFHPLPEYNSVPIHRGLN--IGNHQ 230

Query: 192 SLFHTTYNHQPIG------GGGCDGGASVFYELRSPAALPGVDDGGGHGIGK-------- 251
             ++ T   + +G       G C    S         + P V D      G+        
Sbjct: 231 RSYYNTQRQEFVGYGYGNLAGRCYYTGSPLDHRNIVGSEPLVIDSVPVVPGRLTPVMLPP 290

Query: 252 -----AAAAKTLRLFGVNMECVVSEDSDDDEGDKVTTSTSTTLSSQFCVYNGMPMSMSMP 306
                + A K LRLFGVNMEC    D +  E   +        SS       + +S    
Sbjct: 291 LPPPPSTAGKRLRLFGVNMEC--GNDYNQQEESWLVPRGEIGASSSSSSALRLNLSTDHD 350

[Close]

BLAST of CmoCh16G006470 vs. ExPASy Swiss-Prot
Match: Q9M268 (B3 domain-containing transcription factor NGA2 OS=Arabidopsis thaliana OX=3702 GN=NGA2 PE=2 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 5.1e-48
Identity = 121/254 (47.64%), Postives = 149/254 (58.66%), Query Frame = 0


Query: 1   MEESSNSGVYIEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKFFPLDSSST---EKGLLLS 60
           +EE+S+S   +E+EHMFDKVVTPSDVGKLNRLVIPKQHAE++FPLD+S+T    KGLLL+
Sbjct: 10  IEEASSS---MEREHMFDKVVTPSDVGKLNRLVIPKQHAERYFPLDNSTTNDSNKGLLLN 69

Query: 61  FEDRCGKLWRFRYSYWTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGVC-KDRFFIDWR 120
           FEDR G  WRFRYSYW SSQSYVMTKGWSRFVK+K+LDAGDIVSFQR  C KD+ +IDWR
Sbjct: 70  FEDRSGNSWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRDSCNKDKLYIDWR 129

Query: 121 RRPPHTAVETAFHHHGGGGCGGGGGGYGGGGQFPPYQFQLHGQWNPVATPLSLHRDHAFH 180
           RRP     +   HHH              G  FP +    H Q                 
Sbjct: 130 RRP-----KIPDHHH----------QQFAGAMFPRFYTFPHPQ----------------- 189

Query: 181 LQQNNSVHNNVSLFHTTYNHQPIGGGGCDGGASVFYELRSPAALPGVDDGGGHGIGKAA- 240
           +  N   HN   L+H  ++ + +G G         +      ++P +          A+ 
Sbjct: 190 MPTNYETHN---LYH-RFHQRDLGIGYYVRSMERSHPTAVIESVPVMMQRRAQVASMASR 224

Query: 241 AAKTLRLFGVNMEC 250
             K LRLFGV+MEC
Sbjct: 250 GEKRLRLFGVDMEC 224

[Close]

BLAST of CmoCh16G006470 vs. ExPASy TrEMBL
Match: A0A6J1ETU2 (B3 domain-containing protein Os03g0120900-like OS=Cucurbita moschata OX=3662 GN=LOC111437661 PE=4 SV=1)

HSP 1 Score: 647.5 bits (1669), Expect = 2.8e-182
Identity = 310/310 (100.00%), Postives = 310/310 (100.00%), Query Frame = 0


Query: 1   MEESSNSGVYIEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKFFPLDSSSTEKGLLLSFED 60
           MEESSNSGVYIEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKFFPLDSSSTEKGLLLSFED
Sbjct: 17  MEESSNSGVYIEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKFFPLDSSSTEKGLLLSFED 76

Query: 61  RCGKLWRFRYSYWTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGVCKDRFFIDWRRRPP 120
           RCGKLWRFRYSYWTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGVCKDRFFIDWRRRPP
Sbjct: 77  RCGKLWRFRYSYWTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGVCKDRFFIDWRRRPP 136

Query: 121 HTAVETAFHHHGGGGCGGGGGGYGGGGQFPPYQFQLHGQWNPVATPLSLHRDHAFHLQQN 180
           HTAVETAFHHHGGGGCGGGGGGYGGGGQFPPYQFQLHGQWNPVATPLSLHRDHAFHLQQN
Sbjct: 137 HTAVETAFHHHGGGGCGGGGGGYGGGGQFPPYQFQLHGQWNPVATPLSLHRDHAFHLQQN 196

Query: 181 NSVHNNVSLFHTTYNHQPIGGGGCDGGASVFYELRSPAALPGVDDGGGHGIGKAAAAKTL 240
           NSVHNNVSLFHTTYNHQPIGGGGCDGGASVFYELRSPAALPGVDDGGGHGIGKAAAAKTL
Sbjct: 197 NSVHNNVSLFHTTYNHQPIGGGGCDGGASVFYELRSPAALPGVDDGGGHGIGKAAAAKTL 256

Query: 241 RLFGVNMECVVSEDSDDDEGDKVTTSTSTTLSSQFCVYNGMPMSMSMPTSNPDVPITDFF 300
           RLFGVNMECVVSEDSDDDEGDKVTTSTSTTLSSQFCVYNGMPMSMSMPTSNPDVPITDFF
Sbjct: 257 RLFGVNMECVVSEDSDDDEGDKVTTSTSTTLSSQFCVYNGMPMSMSMPTSNPDVPITDFF 316

Query: 301 EKGKSLDFGT 311
           EKGKSLDFGT
Sbjct: 317 EKGKSLDFGT 326

[Close]

BLAST of CmoCh16G006470 vs. ExPASy TrEMBL
Match: A0A6J1J7X2 (B3 domain-containing protein Os03g0120900-like OS=Cucurbita maxima OX=3661 GN=LOC111483390 PE=4 SV=1)

HSP 1 Score: 607.8 bits (1566), Expect = 2.5e-170
Identity = 296/310 (95.48%), Postives = 302/310 (97.42%), Query Frame = 0


Query: 1   MEESSNSGVYIEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKFFPLDSSSTEKGLLLSFED 60
           MEESSNSGVYIEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKFFPLDSSS EKGLLLSFED
Sbjct: 17  MEESSNSGVYIEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKFFPLDSSSNEKGLLLSFED 76

Query: 61  RCGKLWRFRYSYWTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGVCKDRFFIDWRRRPP 120
           RCGKLWRFRYSYWTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGVCKDRFFIDWR RPP
Sbjct: 77  RCGKLWRFRYSYWTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGVCKDRFFIDWRSRPP 136

Query: 121 HTAVETAFHHHGGGGCGGGGGGYGGGGQFPPYQFQLHGQWNPVATPLSLHRDHAFHLQQN 180
            T VETAFHHHGGGG GG GGG GGGGQFPP+QFQLHGQWNPVATPLSLHRDHAFHLQQN
Sbjct: 137 RTPVETAFHHHGGGGYGGYGGG-GGGGQFPPHQFQLHGQWNPVATPLSLHRDHAFHLQQN 196

Query: 181 NSVHNNVSLFHTTYNHQPIGGGGCDGGASVFYELRSPAALPGVDDGGGHGIGKAAAAKTL 240
           NSVHNNVSLFHTTYNHQPIGGGGCDGGASVF++LRSPAALPGVDD GGHGIGKAAAAKTL
Sbjct: 197 NSVHNNVSLFHTTYNHQPIGGGGCDGGASVFFQLRSPAALPGVDD-GGHGIGKAAAAKTL 256

Query: 241 RLFGVNMECVVSEDSDDDEGDKVTTSTSTTLSSQFCVYNGMPMSMSMPTSNPDVPITDFF 300
           RLFGVNMECVVSEDSDDDEGDKVTTSTSTTLSSQFCVY+GMPMSMSMPTSNP++PITDFF
Sbjct: 257 RLFGVNMECVVSEDSDDDEGDKVTTSTSTTLSSQFCVYDGMPMSMSMPTSNPNIPITDFF 316

Query: 301 EKGKSLDFGT 311
           EKGKSLDFGT
Sbjct: 317 EKGKSLDFGT 324

[Close]

BLAST of CmoCh16G006470 vs. ExPASy TrEMBL
Match: A0A0A0KZM6 (TF-B3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G047970 PE=4 SV=1)

HSP 1 Score: 382.9 bits (982), Expect = 1.3e-102
Identity = 215/333 (64.56%), Postives = 236/333 (70.87%), Query Frame = 0


Query: 4   SSNSGVYIEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKFFPLDSSSTEKGLLLSFEDRCG 63
           ++N  +++EKEHMFDKVVTPSDVGKLNRLVIPKQHAEK+FPLDSSS EKGLLL+FEDRCG
Sbjct: 54  NNNCSIFVEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNEKGLLLNFEDRCG 113

Query: 64  KLWRFRYSYWTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGVCK--DRFFIDWRRRPPH 123
           KLWRFRYSYWTSSQSYVMTKGWSRFVK+KRLDAGDIVSFQR + +  DRFFIDWRRRPPH
Sbjct: 114 KLWRFRYSYWTSSQSYVMTKGWSRFVKDKRLDAGDIVSFQRPLHRNQDRFFIDWRRRPPH 173

Query: 124 TAVETAFHHHGGGGCGGGGGGYGGGGQFPP-----YQFQLHGQW--NPVATPLSLHRDHA 183
            AV+  FH H          G  G  QFPP     + FQLH QW  NPVATPLSL RDH 
Sbjct: 174 PAVDMPFHFH-------RHDGGTGAAQFPPPPPHHHHFQLHSQWNNNPVATPLSLQRDHV 233

Query: 184 FHLQQNNSVHNNVSLFHTTYNHQPIGG---GGCDGGASVFYELRSPAALPGVDD------ 243
            HL Q N   NNVSLFH TYNH         G  GGASVFY LRSP A P V+       
Sbjct: 234 LHLPQYN---NNVSLFHNTYNHHHHHNRYLDGSYGGASVFYHLRSPIAPPQVESVPVVAD 293

Query: 244 ------GGGHGIGKAAAAK-TLRLFGVNMECVVSEDSDDDEGDKVTTSTSTTLSSQFCVY 303
                 GGG GIG+ +AAK TLRLFGV+MEC VS    DDE D  TTS + + SSQF VY
Sbjct: 294 GNGGNGGGGSGIGRTSAAKTTLRLFGVDMECEVS----DDECDVATTSKAMSSSSQFHVY 353

Query: 304 NGM------PMSMSMPTSNPDVPITDFFEKGKS 306
           NGM      PM+M MPTSN ++   DFFEKGKS
Sbjct: 354 NGMPMPMLTPMTMQMPTSNNNISTMDFFEKGKS 372

[Close]

BLAST of CmoCh16G006470 vs. ExPASy TrEMBL
Match: A0A1S4DZH7 (B3 domain-containing transcription factor NGA2-like OS=Cucumis melo OX=3656 GN=LOC103493163 PE=4 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 2.9e-102
Identity = 217/347 (62.54%), Postives = 239/347 (68.88%), Query Frame = 0


Query: 4   SSNSGVYIEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKFFPLDSSSTEKGLLLSFEDRCG 63
           ++N  +++EKEHMFDKVVTPSDVGKLNRLVIPKQHAEK+FPLDSSS EKGLLL+FEDRCG
Sbjct: 54  NNNCSIFVEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNEKGLLLNFEDRCG 113

Query: 64  KLWRFRYSYWTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGVCK--DRFFIDWRRRPPH 123
           KLWRFRYSYWTSSQSYVMTKGWSRFVK+KRLDAGDIVSFQR + +  DRFFIDWRRRPPH
Sbjct: 114 KLWRFRYSYWTSSQSYVMTKGWSRFVKDKRLDAGDIVSFQRPLHRNQDRFFIDWRRRPPH 173

Query: 124 TAVETAFHHHGGGGCGGGGGGYGGGGQFPP-----YQFQLHGQW--NPVATPLSLHRDHA 183
            AV+  FH H          G     QFPP     + FQLH QW  NPVATPLSL RDH 
Sbjct: 174 PAVDMPFHFH-------RHDGGTSAAQFPPPPPPHHHFQLHSQWNNNPVATPLSLQRDHV 233

Query: 184 FHLQQNNSVHNNVSLFHTTYNHQPIGGG----GCDGGASVFYELRSPAALPGVDD----- 243
            HL Q N   NNVSLFH TYNH          G  GGASVFY LRSP A P ++      
Sbjct: 234 LHLPQYN---NNVSLFHNTYNHHHHHHNRYLDGSYGGASVFYHLRSPIAPPQIESVPVVV 293

Query: 244 --------GGGHGIGKAAAAK-TLRLFGVNMECVVSEDSDDDEGDKVTTSTSTTLSSQFC 303
                   GGG GIG+ +AAK TLRLFGV+MEC VS    DDE D  TTS + T SSQF 
Sbjct: 294 DGNGGNGTGGGSGIGRTSAAKTTLRLFGVDMECEVS----DDECDVATTSKTMTSSSQFH 353

Query: 304 VYNGM------PMSMSMPTSNPDVPITDFFEKGK-------SLDFGT 311
           VYNGM      PM+M MPTSN ++   +FFEKGK       S DFGT
Sbjct: 354 VYNGMPMPMLTPMTMQMPTSNDNISTMEFFEKGKSSMSSMSSFDFGT 386

[Close]

BLAST of CmoCh16G006470 vs. ExPASy TrEMBL
Match: A0A6J1FT15 (B3 domain-containing protein Os03g0120900-like OS=Cucurbita moschata OX=3662 GN=LOC111447036 PE=4 SV=1)

HSP 1 Score: 376.3 bits (965), Expect = 1.2e-100
Identity = 216/330 (65.45%), Postives = 237/330 (71.82%), Query Frame = 0


Query: 2   EESSNSGVYIEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKFFPLDSSSTEKGLLLSFEDR 61
           +E  +S +++EKEHMFDKVVTPSDVGKLNRLVIPKQHAEK+FPLDSSS +KGLLL+FEDR
Sbjct: 25  QEMESSSLFVEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNDKGLLLNFEDR 84

Query: 62  CGKLWRFRYSYWTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRG---VCKDRFFIDWRRR 121
           CGK WRFRYSYWTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRG   + KDRFFIDWRRR
Sbjct: 85  CGKSWRFRYSYWTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGLGHLGKDRFFIDWRRR 144

Query: 122 PPHTAVET--AFHH----HGGGGCGGGGGGYGGGGQFPPYQFQLHGQWNPVATPLSLHRD 181
           PPH  ++T   FHH    HGGG  G             P+ F LH QW PVATPLSL RD
Sbjct: 145 PPHAPLDTPITFHHNHHLHGGGAAGVAQ---------IPHHFHLH-QWTPVATPLSLPRD 204

Query: 182 HAFHLQQNNSVHNNVSLFH----TTYNHQ---------PIGGGGCDGGASVFYELRS-PA 241
           H  HL QNNS HNN++LFH      YNH          PI  GG  G  SV Y LRS P 
Sbjct: 205 HLLHLPQNNSNHNNLTLFHNDNFNLYNHHYHHHYLNPPPIQDGG--GSPSVLYHLRSAPP 264

Query: 242 ALPGVDDGGGHGIGK-AAAAKTLRLFGVNMECVVSEDSDDDEGDKVTTSTSTTLSSQFCV 301
             P    GGG GIGK AA++KTLRLFGVNMEC VSED  DDE D +TTST TT+S QF V
Sbjct: 265 PPPVAVGGGGRGIGKGAASSKTLRLFGVNMECAVSEDQSDDECD-ITTST-TTMSPQFRV 324

Query: 302 YNGMPMS--MSMPTSNPDVPITDFFEKGKS 306
           Y+GMPMS  + MP SN  +  TDFF KGKS
Sbjct: 325 YDGMPMSIPIRMPNSNNKL-TTDFFNKGKS 339

[Close]

BLAST of CmoCh16G006470 vs. TAIR 10
Match: AT2G46870.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 196.4 bits (498), Expect = 3.3e-50
Identity = 103/164 (62.80%), Postives = 111/164 (67.68%), Query Frame = 0


Query: 1   MEESSNSGVYIEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKFFPLDSSSTEKGLLLSFED 60
           + E   +    ++EHMFDKVVTPSDVGKLNRLVIPKQHAE+FFPLDSSS EKGLLL+FED
Sbjct: 19  LAEEEGAREVADREHMFDKVVTPSDVGKLNRLVIPKQHAERFFPLDSSSNEKGLLLNFED 78

Query: 61  RCGKLWRFRYSYWTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGV----CKDRFFIDWR 120
             GK WRFRYSYW SSQSYVMTKGWSRFVK+K+LDAGDIVSFQR V       R FIDWR
Sbjct: 79  LTGKSWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRCVGDSGRDSRLFIDWR 138

Query: 121 RRP-----PHTAVETAF--------------------HHHGGGG 136
           RRP     PH A    F                    HHH GGG
Sbjct: 139 RRPKVPDHPHFAAGAMFPRFYSFPSTNYSLYNHQQQRHHHSGGG 182

[Close]

BLAST of CmoCh16G006470 vs. TAIR 10
Match: AT1G01030.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 193.7 bits (491), Expect = 2.1e-49
Identity = 132/320 (41.25%), Postives = 164/320 (51.25%), Query Frame = 0


Query: 12  EKEHMFDKVVTPSDVGKLNRLVIPKQHAEKFFPLDSSSTEKGLLLSFEDRCGKLWRFRYS 71
           EKEHMFDKVVTPSDVGKLNRLVIPKQHAE++FPLDSS+ + G LL+F+DR GK+WRFRYS
Sbjct: 51  EKEHMFDKVVTPSDVGKLNRLVIPKQHAERYFPLDSSNNQNGTLLNFQDRNGKMWRFRYS 110

Query: 72  YWTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGVC----KDRFFIDWRRRPPHTAVETA 131
           YW SSQSYVMTKGWSRFVKEK+LDAGDIVSFQRG+     + + +IDWR RP  + V+  
Sbjct: 111 YWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGIGDESERSKLYIDWRHRPDMSLVQA- 170

Query: 132 FHHHGGGGCGGGGGGYGGGGQFPPYQFQLHGQWNPVATPLSLHRDHAFHLQQNNSVHNNV 191
            H  G  G                + F    Q++    PL  +     H   N  + N+ 
Sbjct: 171 -HQFGNFGFN--------------FNFPTTSQYSNRFHPLPEYNSVPIHRGLN--IGNHQ 230

Query: 192 SLFHTTYNHQPIG------GGGCDGGASVFYELRSPAALPGVDDGGGHGIGK-------- 251
             ++ T   + +G       G C    S         + P V D      G+        
Sbjct: 231 RSYYNTQRQEFVGYGYGNLAGRCYYTGSPLDHRNIVGSEPLVIDSVPVVPGRLTPVMLPP 290

Query: 252 -----AAAAKTLRLFGVNMECVVSEDSDDDEGDKVTTSTSTTLSSQFCVYNGMPMSMSMP 306
                + A K LRLFGVNMEC    D +  E   +        SS       + +S    
Sbjct: 291 LPPPPSTAGKRLRLFGVNMEC--GNDYNQQEESWLVPRGEIGASSSSSSALRLNLSTDHD 350

[Close]

BLAST of CmoCh16G006470 vs. TAIR 10
Match: AT3G61970.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 193.0 bits (489), Expect = 3.6e-49
Identity = 121/254 (47.64%), Postives = 149/254 (58.66%), Query Frame = 0


Query: 1   MEESSNSGVYIEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKFFPLDSSST---EKGLLLS 60
           +EE+S+S   +E+EHMFDKVVTPSDVGKLNRLVIPKQHAE++FPLD+S+T    KGLLL+
Sbjct: 10  IEEASSS---MEREHMFDKVVTPSDVGKLNRLVIPKQHAERYFPLDNSTTNDSNKGLLLN 69

Query: 61  FEDRCGKLWRFRYSYWTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGVC-KDRFFIDWR 120
           FEDR G  WRFRYSYW SSQSYVMTKGWSRFVK+K+LDAGDIVSFQR  C KD+ +IDWR
Sbjct: 70  FEDRSGNSWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRDSCNKDKLYIDWR 129

Query: 121 RRPPHTAVETAFHHHGGGGCGGGGGGYGGGGQFPPYQFQLHGQWNPVATPLSLHRDHAFH 180
           RRP     +   HHH              G  FP +    H Q                 
Sbjct: 130 RRP-----KIPDHHH----------QQFAGAMFPRFYTFPHPQ----------------- 189

Query: 181 LQQNNSVHNNVSLFHTTYNHQPIGGGGCDGGASVFYELRSPAALPGVDDGGGHGIGKAA- 240
           +  N   HN   L+H  ++ + +G G         +      ++P +          A+ 
Sbjct: 190 MPTNYETHN---LYH-RFHQRDLGIGYYVRSMERSHPTAVIESVPVMMQRRAQVASMASR 224

Query: 241 AAKTLRLFGVNMEC 250
             K LRLFGV+MEC
Sbjct: 250 GEKRLRLFGVDMEC 224

[Close]

BLAST of CmoCh16G006470 vs. TAIR 10
Match: AT5G06250.2 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 165.2 bits (417), Expect = 8.1e-41
Identity = 110/267 (41.20%), Postives = 140/267 (52.43%), Query Frame = 0


Query: 13  KEHMFDKVVTPSDVGKLNRLVIPKQHAEKFFPL----------DSSSTEKGLLLSFEDRC 72
           KE +F+K +TPSDVGKLNRLVIPKQHAEK+FPL          D+SS+EKG+LLSFED  
Sbjct: 42  KESLFEKSLTPSDVGKLNRLVIPKQHAEKYFPLNAVLVSSAAADTSSSEKGMLLSFEDES 101

Query: 73  GKLWRFRYSYWTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGVCKD-RFFIDWRRRPPH 132
           GK WRFRYSYW SSQSYV+TKGWSRFVK+K+LD GD+V FQR      R FI WRRR   
Sbjct: 102 GKSWRFRYSYWNSSQSYVLTKGWSRFVKDKQLDPGDVVFFQRHRSDSRRLFIGWRRRGQG 161

Query: 133 TAVETAFHHHGGGGCGGGGGGYGGGGQFPPYQFQLHGQWNPVATPLSLHRDHAFHLQQNN 192
           ++   A  +        G                           LS H+ HA      +
Sbjct: 162 SSSSVAATNSAVNTSSMGA--------------------------LSYHQIHA-----TS 221

Query: 193 SVHNNVSLFHTTYNHQPIGGGGCDGGASVFYELRSPAALPGVDDGGGHGIGKAAAAKTLR 252
           +  N  S  H+ Y+H     G     A+  +   S + +               +++T+R
Sbjct: 222 NYSNPPS--HSEYSHY----GAAVATAAETHSTPSSSVV--------------GSSRTVR 257

Query: 253 LFGVNMECVVSEDSDDDEGDKVTTSTS 269
           LFGVN+EC + E+  DD     TT  S
Sbjct: 282 LFGVNLECQMDENDGDDSVAVATTVES 257

[Close]

BLAST of CmoCh16G006470 vs. TAIR 10
Match: AT2G36080.2 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 164.5 bits (415), Expect = 1.4e-40
Identity = 80/133 (60.15%), Postives = 98/133 (73.68%), Query Frame = 0


Query: 2   EESSNSGVYIEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKFFPLDSS---STEKGLLLSF 61
           ++   + V  EKE +F+K +TPSDVGKLNRLVIPKQHAE++FPL ++   + EKGLLL F
Sbjct: 23  QQQHQNDVVEEKEALFEKPLTPSDVGKLNRLVIPKQHAERYFPLAAAAADAVEKGLLLCF 82

Query: 62  EDRCGKLWRFRYSYWTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGVCK-DRFFIDWRR 121
           ED  GK WRFRYSYW SSQSYV+TKGWSR+VKEK LDAGD+V F R      RFFI WRR
Sbjct: 83  EDEEGKPWRFRYSYWNSSQSYVLTKGWSRYVKEKHLDAGDVVLFHRHRSDGGRFFIGWRR 142

Query: 122 RPPHTAVETAFHH 131
           R   ++   ++ H
Sbjct: 143 RGDSSSSSDSYRH 155

The following BLAST results are available for this feature:

BLAST of CmoCh16G006470 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LMR9	1.1e-50	46.76	B3 domain-containing protein Os03g0120900 OS=Oryza sativa subsp. japonica OX=399...	[more]
Q7F9W2	3.6e-49	73.38	B3 domain-containing protein Os04g0581400 OS=Oryza sativa subsp. japonica OX=399...	[more]
O82799	4.6e-49	62.80	B3 domain-containing transcription factor NGA1 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q9MAN1	3.0e-48	41.25	B3 domain-containing transcription factor NGA3 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q9M268	5.1e-48	47.64	B3 domain-containing transcription factor NGA2 OS=Arabidopsis thaliana OX=3702 G...	[more]

BLAST of CmoCh16G006470 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ETU2	2.8e-182	100.00	B3 domain-containing protein Os03g0120900-like OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1J7X2	2.5e-170	95.48	B3 domain-containing protein Os03g0120900-like OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A0A0KZM6	1.3e-102	64.56	TF-B3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G047970 PE=4 ...	[more]
A0A1S4DZH7	2.9e-102	62.54	B3 domain-containing transcription factor NGA2-like OS=Cucumis melo OX=3656 GN=L...	[more]
A0A6J1FT15	1.2e-100	65.45	B3 domain-containing protein Os03g0120900-like OS=Cucurbita moschata OX=3662 GN=...	[more]

BLAST of CmoCh16G006470 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G46870.1	3.3e-50	62.80	AP2/B3-like transcriptional factor family protein	[more]
AT1G01030.1	2.1e-49	41.25	AP2/B3-like transcriptional factor family protein	[more]
AT3G61970.1	3.6e-49	47.64	AP2/B3-like transcriptional factor family protein	[more]
AT5G06250.2	8.1e-41	41.20	AP2/B3-like transcriptional factor family protein	[more]
AT2G36080.2	1.4e-40	60.15	AP2/B3-like transcriptional factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003340	B3 DNA binding domain	SMART	SM01019	B3_2	coord: 17..119 e-value: 2.7E-20 score: 83.4
IPR003340	B3 DNA binding domain	PFAM	PF02362	B3	coord: 17..118 e-value: 4.6E-27 score: 93.8
IPR003340	B3 DNA binding domain	PROSITE	PS50863	B3	coord: 17..119 score: 14.183938
IPR003340	B3 DNA binding domain	CDD	cd10017	B3_DNA	coord: 15..104 e-value: 1.70054E-24 score: 93.1612
IPR015300	DNA-binding pseudobarrel domain superfamily	GENE3D	2.40.330.10		coord: 10..132 e-value: 1.3E-46 score: 159.1
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	101936	DNA-binding pseudobarrel domain	coord: 14..110
IPR044800	B3 domain-containing transcription factor LEC2-like	PANTHER	PTHR31140	B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3	coord: 5..270
None	No IPR available	PANTHER	PTHR31140:SF2	B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR NGA2	coord: 5..270

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh16G006470.1	CmoCh16G006470.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity