CmoCh16G006430 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh16G006430
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 3A .
Location	Cmo_Chr16: 3169527 .. 3174128 (+)
RNA-Seq Expression	CmoCh16G006430
Synteny	CmoCh16G006430

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAATATTACATAGTTTTTCAAACTTTATGGATTAGAACTAAGGAGACAAATGGAATACTTTATGATCGATTTTCATTATAATTCACTAATTTCCTAAACGAGGCGTAGGTCGGAAAACATCGAGAAATGGAGCAATCCCCATCGGATTCTTCGTCGAGCATCGAAGCCGGACGTCAGATTCCGGCGACATCTCCAAATTCGGCCATTCCCGAGACGCCCACTTGTTCTGTTCTTGAGGACTGCACCAGACCCAGATCTTCGTTGAGCCATACCGAGATTTTCAAAGCCATTGATGTCGTCGAGAAGGACTCTCTCGCCATTGCCGAGAGCTTTACCTCTCTCTTCGCTTCCCTGCGTTCGACTCTCTCCGAGGTCTCATAGTTTTTGCATCCTTCTTCTTTTACGCCCCATTTTCATTTTGCTTTAATATGTTGAAGATCGGATGAATGAGTTTTGAGTTTTGAGTTTGAGTACTTCACCAGATTTGATTATTACTGGACGAACCTGATTTTATCCCCTTTAATAATGACTGGAATCTACCACTCTAGCATGAATTTCTGGAGCAATGATTCTGGGTTTCCTCTTGCCAAGCAGTTTATCTGAGTGGAAATAGTATAATCTTGTAGGTCACCAGCAACTCTATTGATCATATGCATTGCTTCAACGATGCTGCAGGCCGCCTTCAAGAATCTGGTAAGTCAACATAGTAATGATTTTGATTCACAGGAATGGCCGAGTATGATGGCAGTTTAGATGTGTCATTGTCTACTACTGTTACTACTAAACTGATTACATTCATGGGTACTTCTTCCTGTATGAATCAAAATTCTATCTGTTTATCTTTATGTCCTGTGAGATCCCACATTGGTCGGAGAGGGGAACGAAACATTCCTTATAAGGATGTGGAAACCTCTTCCTAGCAGACGTGTTTTAAAACCATGAGGTTGACGGCGATGTGTAACAGGCCAAAGCGGACAATGTCGGCTAATAGTGGACTTGGGCTATTACATGTCCATTATTCTGTTCTAGAATCTGTGTTATGTGATCGGCCTTTGTGCCAGTTTTTGTACTAAATTTGGAAAGAGATTAGTTGCAATCAGTTCTCTCCCATACTACTAACAAAGACCTTGTTTTTCATCTGATGGTCTTTGACATGAGTTCTCTTCTGTTCTTTCAACCTTGTAGTGCTTGATGCGGCAACAAAGGGTAATCGATACATAAATTCTTCCTTGAGGTATGCTTCAATGTCTTCTGGTATCTCCTTTGCTCTATAGGTTTCAATTTCTTTGCTGTCAGTATTTTCTATGACTAATAACTTAAATATTTTACTCATTTGTCAAAATGTGATTGCTCTGTGAATGTTGTAGCTTTTTACAACCTGCTGCATAAAATGATACATGGAAATTCTTGTACCAAGTTCTAGTAGGAGATTAGATTGAAACACGCACATAAAAAGTTTCTTTATTGTTAAAAGATTCTATCCCAAGGGTCCAAAATTATAGTTTAATCTAAAAGAGGTTGTTTGTAACGGCTCAAGCCCACCGCTAGCAGATATTGTCTCTTTGGGCTTTCCCTTAAGGTTTTTAAAACACGTCTGTTAGGGAAAGGTTTCCACACCCTTATAAAGAATGTTTCGTTCCCCTCTCCAATTGATGTGGGATCTCACAATCTACCCCTTTGGGACCCAGCGTCCTCACTAACACTCGTTCCCCTCTCCAATCGATGTGGGACCCCCAATCCACCCCCCTTCGGCACCCAATGTCCTTGTTAGCACACTGCCTCGTGTTCACTCCCTTCGGTGTTCAGCCTCCTCGCTAGCACATCGTCTGGTGTCTGGCTCTGATACCATTTGTAACGGCCCAAGCCCACCGCTAGTAGATATTGTCCTCTTTAGGCTTTCCCTTTCGAGTTCCCCCTCAGTTTTTAAAACGCGTTTGCTAGAGAGATTTCAACACCCTTATAAAGAATGCTTTTGTTGAACCTGTTATGCATCTTTACCCAATCGTAGTAGACTGTTACTTTAGAAAAGGATGTTAGGTATGTATCATTAATTATAGGATTCTTCTTCATCGGTTACTTCCAGAAATTATATAGTTCTTTTAATTATGAAATGTTGATAATTAGAAATACAACTTTTCTGTTGTCTCAATTGTATCAGAAATGTTGCTCGAACATATGATGCTAGGTGTCACGGTCATGCTTGTCCAAGGCGTGTTGCCCATGGCTGCATGCCCATGACAAGCCAAACCCTTTATGTCTTTCCATGTTCTAGTGTTTTACTTTTGTATATCTAGGAAGTATGACGTTTCAGAAAAATCATGTCTAGGCTTGTCAGACATGAAATGCCTCAAAATGTACTATAGGAGGATATGATTAGTTGTCAACTTCTCCCTACCAATAATTATATACTGTGAGCCGTTGTTGTTACTCTTTTGCTTGCATATATAACACATCTTTCAAAACCTCTTCTTCGAAAATCTCTCTCTGCCCTCATTTTCTAAAACCTTCTTCTTAAACCGAGGCCAAAGGCTCGAGCATACGTCGCTTAGTGTAAGTGACGTAAAAACAAATTGGCTTAGCTCACTTGTGGTTGGGAAATGAGTGCCACACAATCGCAAGTCTGCTGCCATCAAAAGTACGATTGTGACACCAAGCACCTAAATAATTGTGGATATAACTGTTACTTGGTAGTCTTCTGCAAAAATTATTAAGAAATGAAAGAACAGCATAAAAGTTTTGAGAGATATTTATTAATGTAATGATAAAAACTACAACTTAGGCGCTTTGAGAAACTATTTGGTGTATCTCTGTGATAATGAGGAGTAAGTCCTCTTGATGAGTCCTCTGTTAGTTTGATTGTGTTCATAGTTTTTTAGTGTGAAATTATATAGTTCTTCAATAGATGTTGGATGGCTGTCCCTGACTACAAATCTGCATAGCTATCACATAGAACTCTCTTTAATGTGATCCGAAGGGAACATAAGATTTAGAAAAGTTTAGTATATTGGCAGAGTTGTGTTTGTACTATCAATGATTGATCATAAGTTAGTAGAAATCAAATCAATGTGTCTTTTTACTTGTATTAATTATGACTCCGACTATGTTGTTTCACAAGTGAAGTTAGTCAATGTGAGATCCCACATCGGTTGGGGAGGAGAACGAAGCATTCCTTATAAGGGTGTGGAAACCTCTCTCTAACAAACGCGTTTTAAAAACCTTGAGGGGAAACTCAAAAGGGAAAGGCCAAAGAGGACAGTATCTATTAGCGGTGGGCTTGGATTGTTACAAATAGTATTAGAGCCAGACACTAGGTGATGTGCCAACGAAGAGGTTGAGCCCCAAAGAGGGGTGGACACGAGGCGGTGTGCCAGCAAGGACGCTGGGTCTCGAAGAGGGGTGGATTAGGGGGTTCCACATTGATTGGAGAAGGGAAGGAGTGCCAGCGAGGACGCTGAGTCCCGAACGGGGGTGGATTGTAAGATCCCACATCGGTTGGGGAGGAGAACAAAGCATTCCTTATAAAGGTGTGGAACCCTCTCCCTCACAAACGCGTTTTAAAAACTTTGAGGGGAAACTCAAAAGGGAAAGGCCAAAGAGGACAGTATCTATTAGCGGTGGGCGTGGATTGTTACAAATAGTATTAGAGCCAGACATCGGATGATGTGCCAACAATGAGGCTGAGCCCCGAAGAGGGGTGGACACGAGGCGGTGTGCCAGCAAGGACGCTGAGTCTCGAAGAGGGGTGGATTAGGGGGTCCCACATCGATTGGAGAAGGGAACGAATGCCAGCGAGGACGCTGAGTCCCGAAGGGGGGGTGGATTGTGAGATCCCACATCGGTTGTAGAGGAGAACGAAACATTCTTTATAAAGGTATGAAAACCTCTCTCTAACAGACGCGTTTTTGGGAAAAACCCAAAGAGGGGCAGTATTTGCTAGTGGTGGGCTTGAGCGGTGAACTAATGGGATTAGTCTAGTTCATCTCTCTAATTCAAAATCATTAAGATCTCTTTTAAATTTCAAGTCCATTCGCCCTTAATTTCCATTATACACATCTTTATACTATCTGATGATGACTAGTAAATCACAATTTCATATCTTAAAGATAATCATATGGCCGATGCTGTAACTTTGGACTGTATTTTGTTGTGTTTTTCAGATTGAATCAGGAAATGAAAGGCATGGACAATCTAGCTGCTCAGCTGTATCCTTTCTATTTCATGCCTAGTAGACCATTTTAATGCTTTAGCTCTTTAGAATTGGGAACCTGAGCATACTAATACTTCTTTATCTGATATCTAAGTCCTCTGCATTACCCACTTCCTTAATTCTTGGTTAGAAAGATTTTGAGGAAGAATGTTGATGAACTAGACTTGGCTGTGAACAAGCTCCTAAATTTTCCATGAGACTCAGCTTGGTCGTAGTTCTTGCAAGCTCGAGGATTACCGTTTCAGTAGAGAGCGAGAACACGGTTCATGTCGAAGAAGTCGCTAGGCAGCTAGAATACAGTACATGAAGCAAAAAAAAAAAAAAAAAAATTCATTGCATAGCTTCCTTCACATTTTACTGTAGGAAGCATCTCATTGCATGGTTGATGTACTTAT

mRNA sequence

TAATATTACATAGTTTTTCAAACTTTATGGATTAGAACTAAGGAGACAAATGGAATACTTTATGATCGATTTTCATTATAATTCACTAATTTCCTAAACGAGGCGTAGGTCGGAAAACATCGAGAAATGGAGCAATCCCCATCGGATTCTTCGTCGAGCATCGAAGCCGGACGTCAGATTCCGGCGACATCTCCAAATTCGGCCATTCCCGAGACGCCCACTTGTTCTGTTCTTGAGGACTGCACCAGACCCAGATCTTCGTTGAGCCATACCGAGATTTTCAAAGCCATTGATGTCGTCGAGAAGGACTCTCTCGCCATTGCCGAGAGCTTTACCTCTCTCTTCGCTTCCCTGCGTTCGACTCTCTCCGAGGTCACCAGCAACTCTATTGATCATATGCATTGCTTCAACGATGCTGCAGGCCGCCTTCAAGAATCTGTGCTTGATGCGGCAACAAAGGGTAATCGATACATAAATTCTTCCTTGAGATTGAATCAGGAAATGAAAGGCATGGACAATCTAGCTGCTCAGCTAAAGATTTTGAGGAAGAATGTTGATGAACTAGACTTGGCTGTGAACAAGCTCCTAAATTTTCCATGAGACTCAGCTTGGTCGTAGTTCTTGCAAGCTCGAGGATTACCGTTTCAGTAGAGAGCGAGAACACGGTTCATGTCGAAGAAGTCGCTAGGCAGCTAGAATACAGTACATGAAGCAAAAAAAAAAAAAAAAAAATTCATTGCATAGCTTCCTTCACATTTTACTGTAGGAAGCATCTCATTGCATGGTTGATGTACTTAT

Coding sequence (CDS)

ATGGAGCAATCCCCATCGGATTCTTCGTCGAGCATCGAAGCCGGACGTCAGATTCCGGCGACATCTCCAAATTCGGCCATTCCCGAGACGCCCACTTGTTCTGTTCTTGAGGACTGCACCAGACCCAGATCTTCGTTGAGCCATACCGAGATTTTCAAAGCCATTGATGTCGTCGAGAAGGACTCTCTCGCCATTGCCGAGAGCTTTACCTCTCTCTTCGCTTCCCTGCGTTCGACTCTCTCCGAGGTCACCAGCAACTCTATTGATCATATGCATTGCTTCAACGATGCTGCAGGCCGCCTTCAAGAATCTGTGCTTGATGCGGCAACAAAGGGTAATCGATACATAAATTCTTCCTTGAGATTGAATCAGGAAATGAAAGGCATGGACAATCTAGCTGCTCAGCTAAAGATTTTGAGGAAGAATGTTGATGAACTAGACTTGGCTGTGAACAAGCTCCTAAATTTTCCATGA

Protein sequence

MEQSPSDSSSSIEAGRQIPATSPNSAIPETPTCSVLEDCTRPRSSLSHTEIFKAIDVVEKDSLAIAESFTSLFASLRSTLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSSLRLNQEMKGMDNLAAQLKILRKNVDELDLAVNKLLNFP

Homology

[Close]

BLAST of CmoCh16G006430 vs. ExPASy TrEMBL
Match: A0A6J1EUG1 (uncharacterized protein LOC111437668 OS=Cucurbita moschata OX=3662 GN=LOC111437668 PE=4 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 6.2e-77
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0


Query: 1   MEQSPSDSSSSIEAGRQIPATSPNSAIPETPTCSVLEDCTRPRSSLSHTEIFKAIDVVEK 60
           MEQSPSDSSSSIEAGRQIPATSPNSAIPETPTCSVLEDCTRPRSSLSHTEIFKAIDVVEK
Sbjct: 1   MEQSPSDSSSSIEAGRQIPATSPNSAIPETPTCSVLEDCTRPRSSLSHTEIFKAIDVVEK 60

Query: 61  DSLAIAESFTSLFASLRSTLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSSL 120
           DSLAIAESFTSLFASLRSTLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSSL
Sbjct: 61  DSLAIAESFTSLFASLRSTLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSSL 120

Query: 121 RLNQEMKGMDNLAAQLKILRKNVDELDLAVNKLLNFP 158
           RLNQEMKGMDNLAAQLKILRKNVDELDLAVNKLLNFP
Sbjct: 121 RLNQEMKGMDNLAAQLKILRKNVDELDLAVNKLLNFP 157

[Close]

BLAST of CmoCh16G006430 vs. ExPASy TrEMBL
Match: A0A6J1J2E9 (uncharacterized protein LOC111482798 OS=Cucurbita maxima OX=3661 GN=LOC111482798 PE=4 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 1.2e-75
Identity = 155/157 (98.73%), Postives = 156/157 (99.36%), Query Frame = 0


Query: 1   MEQSPSDSSSSIEAGRQIPATSPNSAIPETPTCSVLEDCTRPRSSLSHTEIFKAIDVVEK 60
           MEQSPSDSSSSIEAG QIPATSPNSAIPETPTCSVLEDCTRPRSSLSHTEIFKAIDVVEK
Sbjct: 1   MEQSPSDSSSSIEAGSQIPATSPNSAIPETPTCSVLEDCTRPRSSLSHTEIFKAIDVVEK 60

Query: 61  DSLAIAESFTSLFASLRSTLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSSL 120
           +SLAIAESFTSLFASLRSTLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSSL
Sbjct: 61  NSLAIAESFTSLFASLRSTLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSSL 120

Query: 121 RLNQEMKGMDNLAAQLKILRKNVDELDLAVNKLLNFP 158
           RLNQEMKGMDNLAAQLKILRKNVDELDLAVNKLLNFP
Sbjct: 121 RLNQEMKGMDNLAAQLKILRKNVDELDLAVNKLLNFP 157

[Close]

BLAST of CmoCh16G006430 vs. ExPASy TrEMBL
Match: A0A0A0KWT2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G048000 PE=4 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 6.9e-60
Identity = 133/158 (84.18%), Postives = 142/158 (89.87%), Query Frame = 0


Query: 1   MEQSPSDSS-SSIEAGRQIPATSPNSAIPETPTCSVLEDCTRPRSSLSHTEIFKAIDVVE 60
           MEQSP+DSS +SIE   QIPATSPNS      T SV+EDCT+ +SSLS  +I KAI+VVE
Sbjct: 1   MEQSPADSSTTSIETECQIPATSPNST-----TSSVIEDCTKTQSSLSQAQILKAIEVVE 60

Query: 61  KDSLAIAESFTSLFASLRSTLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSS 120
           KDSLA+AESFTSLFASLRS LSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSS
Sbjct: 61  KDSLAMAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSS 120

Query: 121 LRLNQEMKGMDNLAAQLKILRKNVDELDLAVNKLLNFP 158
           LRLNQEMKGMDNLAAQLK+LRKNVDELDLAVNKLLNFP
Sbjct: 121 LRLNQEMKGMDNLAAQLKVLRKNVDELDLAVNKLLNFP 153

[Close]

BLAST of CmoCh16G006430 vs. ExPASy TrEMBL
Match: A0A1S3BTP0 (uncharacterized protein LOC103493156 OS=Cucumis melo OX=3656 GN=LOC103493156 PE=4 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 2.0e-59
Identity = 133/158 (84.18%), Postives = 142/158 (89.87%), Query Frame = 0


Query: 1   MEQSPSDSS-SSIEAGRQIPATSPNSAIPETPTCSVLEDCTRPRSSLSHTEIFKAIDVVE 60
           MEQSP+DSS +SIE   QIPATSPNS      T S +EDCT+ +SSLS T+I +AI+VVE
Sbjct: 1   MEQSPADSSTTSIETECQIPATSPNST-----TSSDVEDCTKTQSSLSQTQILEAIEVVE 60

Query: 61  KDSLAIAESFTSLFASLRSTLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSS 120
           KDSLAIAESFTSLFASLRS LSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSS
Sbjct: 61  KDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSS 120

Query: 121 LRLNQEMKGMDNLAAQLKILRKNVDELDLAVNKLLNFP 158
           LRLNQEMKGMDNLAAQLK+LRKNVDELDLAVNKLLNFP
Sbjct: 121 LRLNQEMKGMDNLAAQLKVLRKNVDELDLAVNKLLNFP 153

[Close]

BLAST of CmoCh16G006430 vs. ExPASy TrEMBL
Match: A0A6J1C7Z8 (uncharacterized protein LOC111008257 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111008257 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 3.9e-55
Identity = 121/157 (77.07%), Postives = 136/157 (86.62%), Query Frame = 0


Query: 1   MEQSPSDSSSSIEAGRQIPATSPNSAIPETPTCSVLEDCTRPRSSLSHTEIFKAIDVVEK 60
           M+Q+ +D S+ I++  QIP TSPNS + E PTCSVLED T+ +  L  TEIFKAI+VVEK
Sbjct: 1   MDQARADFSTKIDS--QIPGTSPNSTVSEMPTCSVLEDSTKSKPPLRQTEIFKAIEVVEK 60

Query: 61  DSLAIAESFTSLFASLRSTLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSSL 120
           DSLAIAESFTSLFASLRS LSE + NSIDHMHCF+DAAG LQESVLDAATKGNRYINSSL
Sbjct: 61  DSLAIAESFTSLFASLRSALSEASGNSIDHMHCFSDAAGCLQESVLDAATKGNRYINSSL 120

Query: 121 RLNQEMKGMDNLAAQLKILRKNVDELDLAVNKLLNFP 158
           RLNQEMKG+DNLAAQLK+LRKNVD LD AVNKLL+FP
Sbjct: 121 RLNQEMKGIDNLAAQLKVLRKNVDALDSAVNKLLDFP 155

[Close]

BLAST of CmoCh16G006430 vs. TAIR 10
Match: AT4G23330.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2365 (InterPro:IPR019314). )

HSP 1 Score: 155.2 bits (391), Expect = 4.3e-38
Identity = 92/151 (60.93%), Postives = 109/151 (72.19%), Query Frame = 0


Query: 7   DSSSSIEAGRQIPATSPNSAIPETPTCSVLEDCTRPRSSLSHTEIFKAIDVVEKDSLAIA 66
           D+ + I+  R + A S     PE       E  + P SSL+  EI K +  VEKDS AIA
Sbjct: 2   DAGAEIDVVRPVEADSAAEISPEQDH----EGRSEP-SSLNQGEILKTLATVEKDSQAIA 61

Query: 67  ESFTSLFASLRSTLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSSLRLNQEM 126
           ESF+SLF SLRSTLSE T +S+DHM CF +AAGRLQE+ LDAATKGNRYINS LRLN+E+
Sbjct: 62  ESFSSLFVSLRSTLSEATGSSVDHMACFGEAAGRLQENALDAATKGNRYINSCLRLNEEI 121

Query: 127 KGMDNLAAQLKILRKNVDELDLAVNKLLNFP 158
           KG++NLAA+LK LRKNVD LD AVNKLL  P
Sbjct: 122 KGVENLAARLKHLRKNVDVLDTAVNKLLRPP 147

[Close]

BLAST of CmoCh16G006430 vs. TAIR 10
Match: AT4G23330.1 (BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 3A (TAIR:AT4G11420.1); Has 63 Blast hits to 55 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 110.5 bits (275), Expect = 1.2e-24
Identity = 67/116 (57.76%), Postives = 79/116 (68.10%), Query Frame = 0


Query: 7   DSSSSIEAGRQIPATSPNSAIPETPTCSVLEDCTRPRSSLSHTEIFKAIDVVEKDSLAIA 66
           D+ + I+  R + A S     PE       E  + P SSL+  EI K +  VEKDS AIA
Sbjct: 2   DAGAEIDVVRPVEADSAAEISPEQDH----EGRSEP-SSLNQGEILKTLATVEKDSQAIA 61

Query: 67  ESFTSLFASLRSTLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSSLRL 123
           ESF+SLF SLRSTLSE T +S+DHM CF +AAGRLQE+ LDAATKGNRYINS LRL
Sbjct: 62  ESFSSLFVSLRSTLSEATGSSVDHMACFGEAAGRLQENALDAATKGNRYINSCLRL 112

The following BLAST results are available for this feature:

BLAST of CmoCh16G006430 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh16G006430 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EUG1	6.2e-77	100.00	uncharacterized protein LOC111437668 OS=Cucurbita moschata OX=3662 GN=LOC1114376...	[more]
A0A6J1J2E9	1.2e-75	98.73	uncharacterized protein LOC111482798 OS=Cucurbita maxima OX=3661 GN=LOC111482798...	[more]
A0A0A0KWT2	6.9e-60	84.18	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G048000 PE=4 SV=1	[more]
A0A1S3BTP0	2.0e-59	84.18	uncharacterized protein LOC103493156 OS=Cucumis melo OX=3656 GN=LOC103493156 PE=...	[more]
A0A6J1C7Z8	3.9e-55	77.07	uncharacterized protein LOC111008257 isoform X2 OS=Momordica charantia OX=3673 G...	[more]

BLAST of CmoCh16G006430 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23330.2	4.3e-38	60.93	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT4G23330.1	1.2e-24	57.76	BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation fa...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 122..149
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	PANTHER	PTHR39708	OS07G0483400 PROTEIN	coord: 32..156
IPR019314	BLOC-1-related complex subunit 6	PFAM	PF10157	BORCS6	coord: 47..147 e-value: 3.5E-6 score: 27.3

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh16G006430.1	CmoCh16G006430.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane