CmoCh16G005670 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh16G005670
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionHepatoma-derived growth factor-related protein 2-like
LocationCmo_Chr16: 2759650 .. 2760738 (+)
RNA-Seq ExpressionCmoCh16G005670
SyntenyCmoCh16G005670
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTCCGGCCCGGTCCGGTCCGGTTCAGGATAATGGAAGAGCGGGTTCCAAAGCGACAACAGTGTCGTGGGCTCCACTTGTTGTAAGGCGTGACTTTGTGACAAATGAATTAGCCGTTGGAAACCTATTTTGCCGACTTTTTCGCCAATCGCCATCCACCTATGGCGGGCTTCACTCGGCTGCTTCCTCCCTAACACGATTCCATTTTTTTTGGTTTTCTTCATCAATGGCGGATTTCTCCTTTCTTTCCGACACCGACGATTCGGCCGTCGAAGATCTGCTTTCCCAAACGCAGGATCTCTGTGTTCTCGAGCAACTCTCTGCCATCAACTGCTCTGGCTTCACCGACTCTGTTCTTCCCACTGACCTTGAATCTCGATTTCGGAAGCTCAAATCCTTTCCTGCTGCCAAATCCGAGACCAGATCCGGTTTCGATTTGAAGAGTAGTCGATCTGTACAGTCCTGCGATGAGAAACCGGACGATGATTTTGCAGTTTTTTCTCCCTCTAAACAGAGTCACAAGAAGGAATTAGGGTTTAGCCCTAAATCTCAGTCGAAGCGTCTGCCGGATTCCTCATCGGGAAAAGGAAATTCAACGCCACCGATGGACAATCAAAAGCCGAAAAATGGAAGTTCCAGAGCGAAATCGAAATGTAGGTACGTTTCATCTCCTTCGTATTCTTCGACTTCATCTGGTGAAATCGATGAATTTTTAGAACCGAAGAAAGGTACCAAAATCCGGTCAAAAACCAGCTCAGAATCGGGATCCTTCGCTTCTCCGCCACAATCTCCGCCGAGAAGAGCCGGTTGTTTTTGGTGTTCACCGAAGAAAGCTTCAGAGAAGAAGAACAGCAGCAACAGAACTCTCGATAATGGCCTTGGATGGGGTAAGAACAACGATTTCCTGTCAGATTTGAACATTTTCTCGGCAAAAGAGCAACAGAAAATCCTGAAAAAGGCAATGAAAGAGGAAGAGAAGATCAATCGGGAGGCTGAGAAAATTGTGAAATGGGCAAAACAAGCTTCGGCTAGGATGAATGTTTCAGACATTGAAGACGAGCTCAGCGATCCAGAAATCAAAAAATGA

mRNA sequence

ATGGCTCCGGCCCGGTCCGGTCCGGTTCAGGATAATGGAAGAGCGGGTTCCAAAGCGACAACAGTGTCGTGGGCTCCACTTGTTGTAAGGCGTGACTTTGTGACAAATGAATTAGCCGTTGGAAACCTATTTTGCCGACTTTTTCGCCAATCGCCATCCACCTATGGCGGGCTTCACTCGGCTGCTTCCTCCCTAACACGATTCCATTTTTTTTGGTTTTCTTCATCAATGGCGGATTTCTCCTTTCTTTCCGACACCGACGATTCGGCCGTCGAAGATCTGCTTTCCCAAACGCAGGATCTCTGTGTTCTCGAGCAACTCTCTGCCATCAACTGCTCTGGCTTCACCGACTCTGTTCTTCCCACTGACCTTGAATCTCGATTTCGGAAGCTCAAATCCTTTCCTGCTGCCAAATCCGAGACCAGATCCGGTTTCGATTTGAAGAGTAGTCGATCTGTACAGTCCTGCGATGAGAAACCGGACGATGATTTTGCAGTTTTTTCTCCCTCTAAACAGAGTCACAAGAAGGAATTAGGGTTTAGCCCTAAATCTCAGTCGAAGCGTCTGCCGGATTCCTCATCGGGAAAAGGAAATTCAACGCCACCGATGGACAATCAAAAGCCGAAAAATGGAAGTTCCAGAGCGAAATCGAAATGTAGGTACGTTTCATCTCCTTCGTATTCTTCGACTTCATCTGGTGAAATCGATGAATTTTTAGAACCGAAGAAAGGTACCAAAATCCGGTCAAAAACCAGCTCAGAATCGGGATCCTTCGCTTCTCCGCCACAATCTCCGCCGAGAAGAGCCGGTTGTTTTTGGTGTTCACCGAAGAAAGCTTCAGAGAAGAAGAACAGCAGCAACAGAACTCTCGATAATGGCCTTGGATGGGGTAAGAACAACGATTTCCTGTCAGATTTGAACATTTTCTCGGCAAAAGAGCAACAGAAAATCCTGAAAAAGGCAATGAAAGAGGAAGAGAAGATCAATCGGGAGGCTGAGAAAATTGTGAAATGGGCAAAACAAGCTTCGGCTAGGATGAATGTTTCAGACATTGAAGACGAGCTCAGCGATCCAGAAATCAAAAAATGA

Coding sequence (CDS)

ATGGCTCCGGCCCGGTCCGGTCCGGTTCAGGATAATGGAAGAGCGGGTTCCAAAGCGACAACAGTGTCGTGGGCTCCACTTGTTGTAAGGCGTGACTTTGTGACAAATGAATTAGCCGTTGGAAACCTATTTTGCCGACTTTTTCGCCAATCGCCATCCACCTATGGCGGGCTTCACTCGGCTGCTTCCTCCCTAACACGATTCCATTTTTTTTGGTTTTCTTCATCAATGGCGGATTTCTCCTTTCTTTCCGACACCGACGATTCGGCCGTCGAAGATCTGCTTTCCCAAACGCAGGATCTCTGTGTTCTCGAGCAACTCTCTGCCATCAACTGCTCTGGCTTCACCGACTCTGTTCTTCCCACTGACCTTGAATCTCGATTTCGGAAGCTCAAATCCTTTCCTGCTGCCAAATCCGAGACCAGATCCGGTTTCGATTTGAAGAGTAGTCGATCTGTACAGTCCTGCGATGAGAAACCGGACGATGATTTTGCAGTTTTTTCTCCCTCTAAACAGAGTCACAAGAAGGAATTAGGGTTTAGCCCTAAATCTCAGTCGAAGCGTCTGCCGGATTCCTCATCGGGAAAAGGAAATTCAACGCCACCGATGGACAATCAAAAGCCGAAAAATGGAAGTTCCAGAGCGAAATCGAAATGTAGGTACGTTTCATCTCCTTCGTATTCTTCGACTTCATCTGGTGAAATCGATGAATTTTTAGAACCGAAGAAAGGTACCAAAATCCGGTCAAAAACCAGCTCAGAATCGGGATCCTTCGCTTCTCCGCCACAATCTCCGCCGAGAAGAGCCGGTTGTTTTTGGTGTTCACCGAAGAAAGCTTCAGAGAAGAAGAACAGCAGCAACAGAACTCTCGATAATGGCCTTGGATGGGGTAAGAACAACGATTTCCTGTCAGATTTGAACATTTTCTCGGCAAAAGAGCAACAGAAAATCCTGAAAAAGGCAATGAAAGAGGAAGAGAAGATCAATCGGGAGGCTGAGAAAATTGTGAAATGGGCAAAACAAGCTTCGGCTAGGATGAATGTTTCAGACATTGAAGACGAGCTCAGCGATCCAGAAATCAAAAAATGA

Protein sequence

MAPARSGPVQDNGRAGSKATTVSWAPLVVRRDFVTNELAVGNLFCRLFRQSPSTYGGLHSAASSLTRFHFFWFSSSMADFSFLSDTDDSAVEDLLSQTQDLCVLEQLSAINCSGFTDSVLPTDLESRFRKLKSFPAAKSETRSGFDLKSSRSVQSCDEKPDDDFAVFSPSKQSHKKELGFSPKSQSKRLPDSSSGKGNSTPPMDNQKPKNGSSRAKSKCRYVSSPSYSSTSSGEIDEFLEPKKGTKIRSKTSSESGSFASPPQSPPRRAGCFWCSPKKASEKKNSSNRTLDNGLGWGKNNDFLSDLNIFSAKEQQKILKKAMKEEEKINREAEKIVKWAKQASARMNVSDIEDELSDPEIKK
Homology
BLAST of CmoCh16G005670 vs. ExPASy TrEMBL
Match: A0A6J1EZA7 (uncharacterized protein LOC111437587 OS=Cucurbita moschata OX=3662 GN=LOC111437587 PE=4 SV=1)

HSP 1 Score: 542.0 bits (1395), Expect = 1.9e-150
Identity = 286/286 (100.00%), Postives = 286/286 (100.00%), Query Frame = 0

Query: 77  MADFSFLSDTDDSAVEDLLSQTQDLCVLEQLSAINCSGFTDSVLPTDLESRFRKLKSFPA 136
           MADFSFLSDTDDSAVEDLLSQTQDLCVLEQLSAINCSGFTDSVLPTDLESRFRKLKSFPA
Sbjct: 1   MADFSFLSDTDDSAVEDLLSQTQDLCVLEQLSAINCSGFTDSVLPTDLESRFRKLKSFPA 60

Query: 137 AKSETRSGFDLKSSRSVQSCDEKPDDDFAVFSPSKQSHKKELGFSPKSQSKRLPDSSSGK 196
           AKSETRSGFDLKSSRSVQSCDEKPDDDFAVFSPSKQSHKKELGFSPKSQSKRLPDSSSGK
Sbjct: 61  AKSETRSGFDLKSSRSVQSCDEKPDDDFAVFSPSKQSHKKELGFSPKSQSKRLPDSSSGK 120

Query: 197 GNSTPPMDNQKPKNGSSRAKSKCRYVSSPSYSSTSSGEIDEFLEPKKGTKIRSKTSSESG 256
           GNSTPPMDNQKPKNGSSRAKSKCRYVSSPSYSSTSSGEIDEFLEPKKGTKIRSKTSSESG
Sbjct: 121 GNSTPPMDNQKPKNGSSRAKSKCRYVSSPSYSSTSSGEIDEFLEPKKGTKIRSKTSSESG 180

Query: 257 SFASPPQSPPRRAGCFWCSPKKASEKKNSSNRTLDNGLGWGKNNDFLSDLNIFSAKEQQK 316
           SFASPPQSPPRRAGCFWCSPKKASEKKNSSNRTLDNGLGWGKNNDFLSDLNIFSAKEQQK
Sbjct: 181 SFASPPQSPPRRAGCFWCSPKKASEKKNSSNRTLDNGLGWGKNNDFLSDLNIFSAKEQQK 240

Query: 317 ILKKAMKEEEKINREAEKIVKWAKQASARMNVSDIEDELSDPEIKK 363
           ILKKAMKEEEKINREAEKIVKWAKQASARMNVSDIEDELSDPEIKK
Sbjct: 241 ILKKAMKEEEKINREAEKIVKWAKQASARMNVSDIEDELSDPEIKK 286

BLAST of CmoCh16G005670 vs. ExPASy TrEMBL
Match: A0A6J1JDL6 (uncharacterized protein LOC111483447 OS=Cucurbita maxima OX=3661 GN=LOC111483447 PE=4 SV=1)

HSP 1 Score: 523.9 bits (1348), Expect = 5.5e-145
Identity = 275/286 (96.15%), Postives = 280/286 (97.90%), Query Frame = 0

Query: 77  MADFSFLSDTDDSAVEDLLSQTQDLCVLEQLSAINCSGFTDSVLPTDLESRFRKLKSFPA 136
           MADFSFLSDTDDSAVEDLLSQTQDLCVLEQLSAINCSGFTDSVLPT+LESRFRKLKSFPA
Sbjct: 1   MADFSFLSDTDDSAVEDLLSQTQDLCVLEQLSAINCSGFTDSVLPTELESRFRKLKSFPA 60

Query: 137 AKSETRSGFDLKSSRSVQSCDEKPDDDFAVFSPSKQSHKKELGFSPKSQSKRLPDSSSGK 196
           AKSE RSGFDLK+SRSV SCDEKPDDDFAVFSPSKQSHKKELGFSPKS S+ LPDSSSGK
Sbjct: 61  AKSENRSGFDLKNSRSVHSCDEKPDDDFAVFSPSKQSHKKELGFSPKSHSQHLPDSSSGK 120

Query: 197 GNSTPPMDNQKPKNGSSRAKSKCRYVSSPSYSSTSSGEIDEFLEPKKGTKIRSKTSSESG 256
           GNSTPPMDNQKPKNGSSRAKSKCRYVSSPSYSS+SSGEIDEFLEPKKGTKIRSKTSSESG
Sbjct: 121 GNSTPPMDNQKPKNGSSRAKSKCRYVSSPSYSSSSSGEIDEFLEPKKGTKIRSKTSSESG 180

Query: 257 SFASPPQSPPRRAGCFWCSPKKASEKKNSSNRTLDNGLGWGKNNDFLSDLNIFSAKEQQK 316
           SFASPPQSPPRRAGCFWCSPKKASEKKNS+NRTLDNGLGWGKNNDFLSDLNIFSAKEQ K
Sbjct: 181 SFASPPQSPPRRAGCFWCSPKKASEKKNSNNRTLDNGLGWGKNNDFLSDLNIFSAKEQHK 240

Query: 317 ILKKAMKEEEKINREAEKIVKWAKQASARMNVSDIEDELSDPEIKK 363
           ILKKAMKEEEKINREAEKIVKWAKQ SARMNVSDIEDELSDPEIKK
Sbjct: 241 ILKKAMKEEEKINREAEKIVKWAKQTSARMNVSDIEDELSDPEIKK 286

BLAST of CmoCh16G005670 vs. ExPASy TrEMBL
Match: A0A0A0KYJ1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G055420 PE=4 SV=1)

HSP 1 Score: 431.4 bits (1108), Expect = 3.7e-117
Identity = 231/283 (81.63%), Postives = 251/283 (88.69%), Query Frame = 0

Query: 77  MADFSFLSDTDDSAVEDLLSQTQDLCVLEQLSAINCSGFTDSVLPTDLESRFRKLKSFPA 136
           MADFSFLSDTDDSAVEDLLSQTQDLC+LEQ+SAINCS FT S LP+DLESRFRKLKSFPA
Sbjct: 1   MADFSFLSDTDDSAVEDLLSQTQDLCLLEQISAINCSSFTHSDLPSDLESRFRKLKSFPA 60

Query: 137 AKSETRSGFDLKSSRSVQSCDEKPDDDFAVFSPSKQSHKKELGFSPKSQSKRLPDSSSGK 196
           AKS TRSGFD ++SRSV S DE   DDFAVFSPSKQS+KKE+GFSPKSQS+ LPD+SS  
Sbjct: 61  AKSNTRSGFDSRNSRSVHSADESLGDDFAVFSPSKQSNKKEVGFSPKSQSQHLPDNSSKI 120

Query: 197 GNSTPPMDNQKPKNGSSRAKSKCRYVSSPSYSSTSSGEIDEFLEPKKGTKIRSKTSSESG 256
           GNST PMDNQ   NGSSR+KSKCRYVSSPS SS SSGEIDE   PK+  K+RSK+ SESG
Sbjct: 121 GNSTSPMDNQDRNNGSSRSKSKCRYVSSPSNSSFSSGEIDEISVPKRDGKVRSKSKSESG 180

Query: 257 SFASPPQSPPRRAGCFWCSPKKASEKKNSSNRTLDNGLGWGKNNDFLSDLNIFSAKEQQK 316
             ASPPQSPPR+ GCFWCSPKK SEKKNS N+ L+NGLGWGKNN+FL+DLNIFSAKEQ+K
Sbjct: 181 YSASPPQSPPRKTGCFWCSPKKTSEKKNSGNKILENGLGWGKNNEFLADLNIFSAKEQEK 240

Query: 317 ILKKAMKEEEKINREAEKIVKWAKQASARMNVSDIEDELSDPE 360
           ILKKAMKEEEKINREAEKIVKWAKQASARMN+SDIEDELSD E
Sbjct: 241 ILKKAMKEEEKINREAEKIVKWAKQASARMNISDIEDELSDDE 283

BLAST of CmoCh16G005670 vs. ExPASy TrEMBL
Match: A0A5D3CYZ5 (Hepatoma-derived growth factor-related protein 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G003060 PE=4 SV=1)

HSP 1 Score: 428.7 bits (1101), Expect = 2.4e-116
Identity = 234/287 (81.53%), Postives = 251/287 (87.46%), Query Frame = 0

Query: 77  MADFSFLSDTDDSAVEDLLSQTQDLCVLEQLSAINCSGFTDSVLPTDLESRFRKLKSFPA 136
           MADFSFLSDTDDSAVEDLLSQTQDLCVLEQ+SAINCS FT S LPTDLESRFRKLKSFPA
Sbjct: 1   MADFSFLSDTDDSAVEDLLSQTQDLCVLEQISAINCSSFTHSDLPTDLESRFRKLKSFPA 60

Query: 137 AKSETRSGFDLKSSRSVQSCDEKPDDDFAVFSPSKQSHKKELGFSPKSQSKRLPDSSSGK 196
           AKS+TRSGFD ++S SV S DE   DDFA+FSPSKQS+KKE+GFSPKSQ + LPD SS  
Sbjct: 61  AKSDTRSGFDSRNSPSVHSADENLGDDFAIFSPSKQSNKKEVGFSPKSQLQHLPDYSSEI 120

Query: 197 GNSTPPMDNQKPKNGSSRAKSKCRYVSSPSYSSTSSGEIDEFLEPKKGTKIRSKTSSESG 256
           GNST PMDNQ PKNGSSR+KSKCRYVSSPS SS SSGEIDE    KK  KIRSKT SESG
Sbjct: 121 GNSTSPMDNQNPKNGSSRSKSKCRYVSSPSNSSFSSGEIDEISVRKKDGKIRSKTKSESG 180

Query: 257 SFASPPQSPPRRAGCFWCSPKKASEKKNSSNRTLDNGLGWGKNNDFLSDLNIFSAKEQQK 316
             ASPPQSPPR+ GCFWCSPKK SEKK+S N+ L+N LGWGKNN+FLSDLN+FSAKEQ+K
Sbjct: 181 YSASPPQSPPRKTGCFWCSPKKTSEKKSSGNKILENSLGWGKNNEFLSDLNVFSAKEQEK 240

Query: 317 ILKKAMKEEEKINREAEKIVKWAKQASARMNVSDIEDELS-DPEIKK 363
           ILKKAMKEEE INREAEKIVKWAKQASARMN+SDIEDELS D EIKK
Sbjct: 241 ILKKAMKEEEMINREAEKIVKWAKQASARMNISDIEDELSDDEEIKK 287

BLAST of CmoCh16G005670 vs. ExPASy TrEMBL
Match: A0A1S3BTQ7 (uncharacterized protein LOC103493061 OS=Cucumis melo OX=3656 GN=LOC103493061 PE=4 SV=1)

HSP 1 Score: 428.7 bits (1101), Expect = 2.4e-116
Identity = 234/287 (81.53%), Postives = 251/287 (87.46%), Query Frame = 0

Query: 77  MADFSFLSDTDDSAVEDLLSQTQDLCVLEQLSAINCSGFTDSVLPTDLESRFRKLKSFPA 136
           MADFSFLSDTDDSAVEDLLSQTQDLCVLEQ+SAINCS FT S LPTDLESRFRKLKSFPA
Sbjct: 1   MADFSFLSDTDDSAVEDLLSQTQDLCVLEQISAINCSSFTHSDLPTDLESRFRKLKSFPA 60

Query: 137 AKSETRSGFDLKSSRSVQSCDEKPDDDFAVFSPSKQSHKKELGFSPKSQSKRLPDSSSGK 196
           AKS+TRSGFD ++S SV S DE   DDFA+FSPSKQS+KKE+GFSPKSQ + LPD SS  
Sbjct: 61  AKSDTRSGFDSRNSPSVHSADENLGDDFAIFSPSKQSNKKEVGFSPKSQLQHLPDYSSEI 120

Query: 197 GNSTPPMDNQKPKNGSSRAKSKCRYVSSPSYSSTSSGEIDEFLEPKKGTKIRSKTSSESG 256
           GNST PMDNQ PKNGSSR+KSKCRYVSSPS SS SSGEIDE    KK  KIRSKT SESG
Sbjct: 121 GNSTSPMDNQNPKNGSSRSKSKCRYVSSPSNSSFSSGEIDEISVRKKDGKIRSKTKSESG 180

Query: 257 SFASPPQSPPRRAGCFWCSPKKASEKKNSSNRTLDNGLGWGKNNDFLSDLNIFSAKEQQK 316
             ASPPQSPPR+ GCFWCSPKK SEKK+S N+ L+N LGWGKNN+FLSDLN+FSAKEQ+K
Sbjct: 181 YSASPPQSPPRKTGCFWCSPKKTSEKKSSGNKILENSLGWGKNNEFLSDLNVFSAKEQEK 240

Query: 317 ILKKAMKEEEKINREAEKIVKWAKQASARMNVSDIEDELS-DPEIKK 363
           ILKKAMKEEE INREAEKIVKWAKQASARMN+SDIEDELS D EIKK
Sbjct: 241 ILKKAMKEEEMINREAEKIVKWAKQASARMNISDIEDELSDDEEIKK 287

BLAST of CmoCh16G005670 vs. TAIR 10
Match: AT1G31460.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23270.1); Has 1251 Blast hits to 756 proteins in 185 species: Archae - 0; Bacteria - 295; Metazoa - 374; Fungi - 176; Plants - 58; Viruses - 17; Other Eukaryotes - 331 (source: NCBI BLink). )

HSP 1 Score: 125.2 bits (313), Expect = 1.1e-28
Identity = 115/310 (37.10%), Postives = 160/310 (51.61%), Query Frame = 0

Query: 77  MADFSFLSDTDDSAVEDLLSQTQDLCVLEQLSAINCSGFTDSVLPTDLESRFRKLKSFPA 136
           MADF + SDTDDSAVE+L+SQ ++L  LEQ++AINCSGFTDS LP DLESRFR+LKS PA
Sbjct: 1   MADFGYFSDTDDSAVEELISQAKELSDLEQVAAINCSGFTDSTLPDDLESRFRRLKSLPA 60

Query: 137 A--------KSETRSGFDLKSSRSVQ--------------SCDEKPDDDFAVFSPSKQSH 196
           A         S       L  S+SV                     D+D    S +    
Sbjct: 61  APRHEPVSSSSSMNRQKPLSHSKSVNVNFSGNRRNPGKKTGSVSLSDED----SSNLSRK 120

Query: 197 KKELGFSPKSQSKRLPD-----SSSGKGNSTPPMDNQKPKNGSSRAKSKCRYVSSPSYSS 256
           K++L     SQ++ + +     S SG  + +  +   K +      K K R V     S 
Sbjct: 121 KRDLDLKSSSQAELVSNGSGDFSDSGNISESKILSPVKQQTKKKLPKEKRRIV-----SP 180

Query: 257 TSSGEIDEFLEPKKGTKIRSKTSSESGSFASPPQSPPRRAGCFW-CSPKKA-SEKKNSSN 316
           +SS  ID    P   ++   K+  +S S      SP +  G  W  SPKK+ + KKN  N
Sbjct: 181 SSSSSIDLATPPSTDSEPEKKSKPKSKSSWFDKLSPSKLIGSIWRSSPKKSTTNKKNLKN 240

Query: 317 ------RTLDNGLGWGKN-NDFLSDLNIFSAKEQQKILKKAMKEEEKINREAEKIVKWAK 351
                  T  +G     + ++FLSDLN F  ++Q+K+LKKA+KE++K+ +EA +I+K AK
Sbjct: 241 CKSFGAATYSSGRERNVDFDEFLSDLNAFPVEDQRKMLKKALKEQQKMRKEAAEIIKMAK 300

BLAST of CmoCh16G005670 vs. TAIR 10
Match: AT1G23270.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G31460.1); Has 901 Blast hits to 142 proteins in 59 species: Archae - 0; Bacteria - 69; Metazoa - 176; Fungi - 29; Plants - 28; Viruses - 0; Other Eukaryotes - 599 (source: NCBI BLink). )

HSP 1 Score: 62.8 bits (151), Expect = 6.7e-10
Identity = 57/164 (34.76%), Postives = 83/164 (50.61%), Query Frame = 0

Query: 81  SFLSDTDDSAVEDLLSQTQDLCVLEQLSAINCSGFT-DSVLPTDLESRFRKLKSFPAAKS 140
           SF +  DDSAVE+LLSQ +D  VLEQ++ INCSGFT D+ LPT+ E+R R+LKS P +++
Sbjct: 3   SFFTGKDDSAVEELLSQAKDQYVLEQVAKINCSGFTDDTALPTNPETRLRRLKSLPVSRT 62

Query: 141 ETRSGFDLKSSRSVQSCDEKPDDDFAVFSPSKQSHKKELGFS-------------PKSQS 200
           ++ S    K      S    P+  +     S  S   ++G S              K++ 
Sbjct: 63  DSVSSSPKKLLSHSNSMASHPEKKYRGNVSSVSSFSIQVGKSCPLDSSVEETQIFSKTKR 122

Query: 201 KRLPDSSSGKGNSTPPMDNQKPKNGSSRAKSKCRYVSSPSYSST 231
            +   S  G G S     +   + GSS ++  C  VSS   SS+
Sbjct: 123 NQSVKSRGGLGES-----SGSKRIGSSSSRFSCGNVSSTGSSSS 161

BLAST of CmoCh16G005670 vs. TAIR 10
Match: AT2G41342.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 45.8 bits (107), Expect = 8.4e-05
Identity = 29/75 (38.67%), Postives = 43/75 (57.33%), Query Frame = 0

Query: 274 CSPKKASEKKNSSNRTLDNGLGWGKNND-FLSDLNIFSAKEQQKILKKAMKEEEKINREA 333
           CS    S ++++   T D    W   +D +LSD + FS KEQ+  LK A +EE+++  EA
Sbjct: 7   CSRDPDSTRRSTMGSTSDR--RWQTGDDKYLSDTSTFSVKEQEHQLKAARREEQRLGHEA 66

Query: 334 EKIVKWAKQASARMN 348
           EK+  W K  SAR +
Sbjct: 67  EKVNSWVKHESARFD 79

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1EZA71.9e-150100.00uncharacterized protein LOC111437587 OS=Cucurbita moschata OX=3662 GN=LOC1114375... [more]
A0A6J1JDL65.5e-14596.15uncharacterized protein LOC111483447 OS=Cucurbita maxima OX=3661 GN=LOC111483447... [more]
A0A0A0KYJ13.7e-11781.63Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G055420 PE=4 SV=1[more]
A0A5D3CYZ52.4e-11681.53Hepatoma-derived growth factor-related protein 2-like OS=Cucumis melo var. makuw... [more]
A0A1S3BTQ72.4e-11681.53uncharacterized protein LOC103493061 OS=Cucumis melo OX=3656 GN=LOC103493061 PE=... [more]
Match NameE-valueIdentityDescription
AT1G31460.11.1e-2837.10unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G23270.16.7e-1034.76unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT2G41342.18.4e-0538.67unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 311..331
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 152..182
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 149..296
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 185..235
NoneNo IPR availablePANTHERPTHR35692F26F24.11coord: 77..358
NoneNo IPR availablePANTHERPTHR35692:SF1F26F24.11coord: 77..358

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh16G005670.1CmoCh16G005670.1mRNA