CmoCh16G005560 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTTGGGCGAATTGGATCCCGCCTTGCATCAACTGAATCGGAAACCGTGGTGAAGATTGCTTGGATTCTTGCCTTTCTCCAGATCTCAGGTACGGATTTCCTCTTACTTTCGATATAGGGCGAGTTAATCTAACCGTTCGCATTTTCCATAATCGGAGTTGTAGCTTTTTGTTGCTAGTTTTGATTTATCTGCGTGACCGAATTAGAAATTAATGGATCTGGACCGTGTCTGAATCATGATTCTCATTCTCCTCCGTCTTTCGCTTACGAAGTTGAGGACTGAAGAGCATAAGCTTGATTGTTAATTTCGGCTAATGTTTTTGTCTATCATAAAACCTATTGATATTCGTTGAAGTTAATTGGTTTCCGTTTGGTTGCTTCAGTCCATAGAAAACAGTGACAGATAATAACTCTAGTTTCGATTTAAAACTCGATTCTAATCCATGTACAATAACTGAACTGTTAGAACTTTTCTCATGAAAAGAAAGAAAAAAAAAACTGAATTAGTAGAACTTTGTTTTTAATCCGTGCTCTGCTTCTGGCAAAAGAAGAAAAAAGGAAAAATAGAGAGATGATGATAATCTTTGAACTGTGTAATTAGTGTTTGGTTCAATTAATGGATCCGTTTTCTGAGTAAATTTCTGGGAAGGAAGAACGTAACAAAAGAAAGAGGGAAAGAAGTAGCGAACTGTTTGTTAGTTGGATTCTTATGTTAATTCTCATATGACTGTTGAATTCCCCACAAAACGAGTTCAAGTTTCCTGAAATTTTGTGACCTTCGTTTCTTTTGAGGGAAGTAGAATTAAGAACAATGAAAGTTGTATTCCGGAAGGGAGGGAATTTGTTTCCATTTGACGAATCATGGGGCGTCGAGTTCCATCATTCGATGATAGTAGCTTATGGAAATGGAGACTATCCTATTCCTTGTGTTGGGAAAATAAAATATAAGCGAGATGGTTTGTTTTTACTAGTAGGAAATAGCACAAGGTTTTGTCGTTATTTCATATATATAGTTAGTTAGTTAGTTAGTTTTTGTGATTTTATTTTTGTTCTTTCAAAATTACAATGCATACAATGCATTATGCATTGTAAGTATAATAAATATGTTCCACTTTTAGTAAACTTTCATGAAAATAACTAACTATTTAGTAGTTCAACTTTATTTTGTAATAATTTAGTTCTCATTGTGAACATTATTTCAAGATTTAATAGTCTTCCTAGGTAGATTAATGAACTAATTAGGGATAGATTTTTGTTGGATAGATTTTTCTCTTAATCCATATAGTAGTTACTTTTGTTCGGGTTTCTTGGTTTGGGCTTAAATTGGGAACCGAACTGATGTCCAGTTAAGTGAATTTTTCTTTGGATTGATTCTGTTCAGTTATTTCAAATCTCGGTTTGGTTGGTTAAGAAGGGTTTTCCTTTTGTGTTTGTATATTCGTTTAGTGTTCTTTCCGTTTTGTGACGTCCCATTTAATATGAACAATTAAACCAAAGAATTGGGTTCGAGTTTCGAGTTTATGAATTTTACGTTCTTAAGAGAATCATACGCACATGTTTTTTAATTCACAGTTTTGGGCATATTAGTTTAAAATATTTTTGAATTAAAAGAGAAGTTAGATATTGGGTCTAATCTTTTGTGTAGTCATGGAAAGTAGTAAAATATTCTCAGTTGCATTTTTGCCTAACTGATGTAGCCTATACTTCTCCCTCTGTTTTATTCTAGGCTACCACTTTGCTTAAAGGAGTAGATTCTGGATAACCTTCATGATAACCAAACAGACTTCATTTAAATAAGACACTGAATTCATTTAAATAAGAAATGAAAATATTAAAATTGTTTTGTCGCTGTATCATTTTGTGCATACTTGGCATTGAGTTTGACTAGTATTGCATTTCATTTTCACTTGTTTTTCATCCTGAGTTCGGAGTATAGATACTACATGTCTTAAATTTAAAATGAGTAGGTTAAATATGTAGGATAATTTGTATGTGTTTAATTTGCATGCATCTTCGTTTTGTAAGTTTTATACTTCAAATTTTTATAATATGTATGAAAATCGCATTTGAGTGAAACTTTATGCAAGTCTTTTTTTTTTTTTTTCCTTTTTCTTACAAAATGAATAAGACCAATCTTGTACGATTATTGTGTGTAAATAAAAGTTCTAAATTCAATTATGCTTAAAAATAAAAATAATTCTTTTCATCTTTTATCTATACTCTCGACCTTTATCCATGAGAAAACTTACTCTACATATTTTAAACGTAATTACAAAATAAACATTTTAAAGCCATCAAATAGTAACAAAGGAGTTATTAAAGAGACTGCGATTGCATGTTTGGTTTTTTAGGGTTTAAGCCTCACTTGCTTGGGTTCGCATTTTTGGTTTTTTAGGATTCAAGCCTCATGGTTTTTTAGGATTTGCTTTCTATCTAAACTTTAGACATGTAATAACTACACCAATGGTTGTATGCAAAATTAGTTAAATTATTAAATTATTTATAATTAGTTTATATTATTTTATGAAAAATTAGGTATTATTGTATGCAAAATTAGTTAAATTATTAAATTATTTGTAATTAGTTTATACTATTTTATGAAAAATTAGGTATTATTGTATGCAAAATTAGTTAAATTATTTGTAATAAGTTTATATAATTTTATGAAAAATTAGATAGCTATTTTCGAGAGAATTCTAATTTATGAGTGTGAGACCGAAACAAGCTTTAGAGACAACCTTAAGCTAGCATCGAGGTAGACCAACCAAGTAAGTGACTCTACCATTGGTTCGATTAGAATCATTGTTTTATGTATGATGACACGTGTTTAGTGACCTTGCACGTGTCATGTGTTGGTTATGATTGTTATGACGATATAATATGTCATGATGATGTTGATATGTTGTGATGATGGGTTACATTATGATGATAGGAATGCGTCGTAGTAGTGGCCCTACTAGGCCAGGCCAGGTCAGATTAGGTAAGTGGCCCTACCAGGCCAGGTCAGGTCAGACTAGGTAAGTGGCCCTACCAGGCCAGGTCAGGTCAGACTAGGTAAGTGGCCCTACCAAGCCAGGCCAGGCCAGGTCAGACTAGGTAAGTGGCCCTACCAGGCCAGGTCAGACTAGGAGTGGCCCTACCAGGCCAGGTCAGGTCAGACTAGGTAAGTGGCCCTACCAGGCCAGGTCAGGTCAGACTAGGTAAGTGGCCCTACCAGGCCAGGTCAGGTCAGACTAGGTAAGTGGCCCTATTAGGCCAGGCCAGGTGTCAGGCCAGACTAGGTAAGTGGCCCTACTAGGCCAGGCCAGGTCAGGTCAGACCAGATAAGTGGCCCTATTAGGCCAGACCAGACCAGGTAAGTGGCCCTACTAGGCCAGGCCAGACTAGACCAGGTAAGTGGCCCTACTAGGCCAGGCCAGACCAGGTAAGTGGCCCTACTAAGCCAAGCCAGACTAGACCAGACCAGGTAAGTGGCCCTACTAAGCCAGGCCAGACCAGACCAGGTAAGTGGGCCCTACGAGGCCAGACCAGACCAGACCAAGTATGCGGACCAGGCCAGACCAGGTACGTGGACCAGACCAGGTATGCAGACCAGGTACGTGGACCAGGCCAAACCAGACCAGACCAGACCAGGTAGGTGGCCCTACGCGCCTAGGCCAAACTAGACCAGGTAGGTGGCCCTACGCGCCTAGGCCAAACTAGACCAAGTAGGTGGCCTTACGCGCCCAGGCCAAACTAGACCAAGTAGGTGGCCCTACGCGCCCAGGCCAAACCAGACCAGGTGGGTGGCCCTACGAGCCCTGGTCAAACCAGACCAGGTACGTGGACCAGGTCAAACCAGACCAGGTACGTGGCCCTACCAGCCTAGGCCAAACCAGACCAGGTAAGGTGGCCCTACCAGACCAGGTAAGGTGGCCCTACCAGACCAGGCCAGACTAA ATGTTTGGGCGAATTGGATCCCGCCTTGCATCAACTGAATCGGAAACCGTGGTGAAGATTGCTTGGATTCTTGCCTTTCTCCAGATCTCAGAATTAAGAACAATGAAAGTTGTATTCCGGAAGGGAGGGAATTTGTTTCCATTTGACGAATCATGGGGCGTCGAGTTCCATCATTCGATGATAGTAGCTTATGGAAATGGAGACTATCCTATTCCTTGTGTTGGGAAAATAAAATATAAGCGAGATGGAATGCGTCGTAGTAGTGGCCCTACTAGGCCAGGCCAGGTCAGATTAGGTAAGTGGCCCTACCAGGCCAGGTCAGGTCAGACTAGGCCAGGTCAGACTAGGAGTGGCCCTACCAGGCCAGGTCAGGTCAGACTAGGTAAGTGGCCCTACCAGGCCAGGTCAGGTCAGACTAGGCCAGGCCAGGTCAGGTCAGACCAGATAAGTGGCCCTATTAGGCCAGACCAGACCAGGCCAGACCAGGTAAGTGGCCCTACTAAGCCAAGCCAGACTAGACCAGACCAGGTAAGTGGCCCTACTAAGCCAGGCCAGACCAGACCAGGTAAGTGGGCCCTACGAGGCCAGACCAGACCAGACCAAGTATGCGGACCAGGCCAGACCAGGTACGTGGACCAGACCAGGTATGCAGACCAGGTGGCCTTACGCGCCCAGGCCAAACTAGACCAAGTAGGTGGCCCTACGCGCCCAGGCCAAACCAGACCAGGTGGGTGGCCCTACGAGCCCTGGTCAAACCAGACCAGGTACGTGGACCAGGTCAAACCAGACCAGGTACGTGGCCCTACCAGCCTAGGCCAAACCAGACCAGGTAAGGTGGCCCTACCAGACCAGGTAAGGTGGCCCTACCAGACCAGGCCAGACTAA ATGTTTGGGCGAATTGGATCCCGCCTTGCATCAACTGAATCGGAAACCGTGGTGAAGATTGCTTGGATTCTTGCCTTTCTCCAGATCTCAGAATTAAGAACAATGAAAGTTGTATTCCGGAAGGGAGGGAATTTGTTTCCATTTGACGAATCATGGGGCGTCGAGTTCCATCATTCGATGATAGTAGCTTATGGAAATGGAGACTATCCTATTCCTTGTGTTGGGAAAATAAAATATAAGCGAGATGGAATGCGTCGTAGTAGTGGCCCTACTAGGCCAGGCCAGGTCAGATTAGGTAAGTGGCCCTACCAGGCCAGGTCAGGTCAGACTAGGCCAGGTCAGACTAGGAGTGGCCCTACCAGGCCAGGTCAGGTCAGACTAGGTAAGTGGCCCTACCAGGCCAGGTCAGGTCAGACTAGGCCAGGCCAGGTCAGGTCAGACCAGATAAGTGGCCCTATTAGGCCAGACCAGACCAGGCCAGACCAGGTAAGTGGCCCTACTAAGCCAAGCCAGACTAGACCAGACCAGGTAAGTGGCCCTACTAAGCCAGGCCAGACCAGACCAGGTAAGTGGGCCCTACGAGGCCAGACCAGACCAGACCAAGTATGCGGACCAGGCCAGACCAGGTACGTGGACCAGACCAGGTATGCAGACCAGGTGGCCTTACGCGCCCAGGCCAAACTAGACCAAGTAGGTGGCCCTACGCGCCCAGGCCAAACCAGACCAGGTGGGTGGCCCTACGAGCCCTGGTCAAACCAGACCAGGTACGTGGACCAGGTCAAACCAGACCAGGTACGTGGCCCTACCAGCCTAGGCCAAACCAGACCAGGTAAGGTGGCCCTACCAGACCAGGTAAGGTGGCCCTACCAGACCAGGCCAGACTAA MFGRIGSRLASTESETVVKIAWILAFLQISELRTMKVVFRKGGNLFPFDESWGVEFHHSMIVAYGNGDYPIPCVGKIKYKRDGMRRSSGPTRPGQVRLGKWPYQARSGQTRPGQTRSGPTRPGQVRLGKWPYQARSGQTRPGQVRSDQISGPIRPDQTRPDQVSGPTKPSQTRPDQVSGPTKPGQTRPGKWALRGQTRPDQVCGPGQTRYVDQTRYADQVALRAQAKLDQVGGPTRPGQTRPGGWPYEPWSNQTRYVDQVKPDQVRGPTSLGQTRPGKVALPDQVRWPYQTRPD Homology
BLAST of CmoCh16G005560 vs. ExPASy TrEMBL
Match: A0A4C1SCD7 (Glutamine-rich protein 2 OS=Eumeta variegata OX=151549 GN=QRICH2 PE=4 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 4.8e-22 Identity = 102/220 (46.36%), Postives = 112/220 (50.91%), Query Frame = 0
BLAST of CmoCh16G005560 vs. ExPASy TrEMBL
Match: A0A4C2A0W0 (Glutamine-rich protein 2 (Fragment) OS=Eumeta variegata OX=151549 GN=QRICH2 PE=4 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 1.1e-21 Identity = 102/219 (46.58%), Postives = 110/219 (50.23%), Query Frame = 0
BLAST of CmoCh16G005560 vs. ExPASy TrEMBL
Match: A0A4C2A9C4 (Glutamine-rich protein 2 OS=Eumeta variegata OX=151549 GN=QRICH2 PE=4 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 1.4e-21 Identity = 102/214 (47.66%), Postives = 111/214 (51.87%), Query Frame = 0
BLAST of CmoCh16G005560 vs. ExPASy TrEMBL
Match: A0A4C2A8X5 (Uncharacterized protein OS=Eumeta variegata OX=151549 GN=EVAR_90489_1 PE=4 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 4.9e-19 Identity = 91/194 (46.91%), Postives = 103/194 (53.09%), Query Frame = 0
BLAST of CmoCh16G005560 vs. ExPASy TrEMBL
Match: U3KJQ0 (Uncharacterized protein OS=Ficedula albicollis OX=59894 PE=4 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 7.1e-18 Identity = 93/207 (44.93%), Postives = 111/207 (53.62%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|