CmoCh16G005120 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh16G005120
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Phytoene synthase, chloroplastic
Location	Cmo_Chr16: 2472841 .. 2477006 (+)
RNA-Seq Expression	CmoCh16G005120
Synteny	CmoCh16G005120

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCACCAATCCTCCCATGTGTGATCTTTAAGGATGAGAGAGAGGGCATATTCCCTCCCACGCTCTGGCTTTCAAGGGGAGTGAGTGCTTTTTGAACCCCCAATTGAGAAGTTTTTGATTCCTTGTTCTTCCTTCAATCCAAAATGGCCAAGAAATTGATAGTCACCCATTTACTCTCCTCTTTCTCTCGCTGAATCCACCAAATAAGGGTGCGGGGAGGGGAGAAGAAGCAGGGCCGAGGGGGGTTTGTGGGTGGTTGTGAAGAAGATGTCTGGTGTCAATGCCAATGCTCTGCTCAGCCCCAAGCCGAGAATCAGAATCGGGTGCAAGCCAATTGGGTGTAAGAGATTGAGTCGTTTTTGTGGTGGGGTTTGGGGTTCCTCTGCTGTGGTAGCGAACCCTTCAAGATCGGCTGAAGAAAGGGTGTATGAAGTGGTGTTGAAGCAAGCGGCTCTTGTGAGGGAACCCAGAAAGGATCGAGAGAGAGGTTTGGATTGGGAGAAAACCATACAAAATGAAGGCAGTATCAGTGATGATGGGAATCTCTTGAATGAGGCTTATGCTCGATGTGGTGAGGTCTGTGCTGAATATGCCAAAACGTTTTACTTGGGTAAACCTTCCCTCCCTATGCTACTGTTTCATTTCTGGGTTGAATGATCTTGTTTTTGTCATCCTGTTAGTCTTCTTTGAGATTTAGGTAGAAAATGGAACTGATAATGACTGTCTTGGAATGTTTTCTACTAGAATATGAGATCCACGTTGGGGAATGAAGCATCTCTTTGTAAGAGGAAGAGGGTGGAACCTCTACCTAATAGACGTGTATTAAAATCATGAAGAGTAGACAATATCTGCTAGTGGTGGACTTGGATTGTTACAAATAGTATTATAGTCAGACACCGAGCAGTGTGCTATTGAGGACGTTGGGCCCTAAGGGGTTGTGAGTTCTTACATTGGTTGGAGAGGGGAACGAAGCATCCCTTTATAAGGGTGTGGAAACCTCTCACTGATAGATGTGTTCTAAAACCATGAGGCTGACGGCGATACGGGCCAAAGCGGACAATATTTGCTAGTGGTGGGCTTGAACTGTTACAAATGGTAACAGAGCCAGACACCGGGCGGCGTGCCATCGAGGACGCTGACCCCTAAGAGGGTGGATTGTGAGTTCCCACATTGGTTGGAGAGGAGAACAAAGCATCCATAAGGGTGTGGAAATCTCTCACTGATAGATGCGTTTTAAAACCATGAGGCTGACGGTGATACGGGCCAAAGCAGACAATATTTGCTAGCGGTGGGCTTGGACTGTTACAAAGGGTATTAGAGTTAGACACCGGGCGGTGTGCCAATGAAGACGCAAGGCCTCAAGGGGGTGGATTGTGAGATCCCACATTGATTAGAGAGGGGAACGAAGCATCCATTTATAAGGACGTGGAAACCTCTCACTGATAGATGCGTTTTAAAACCATGAGGTTGACGGTGATACGGGCCAAAGCAGACAATATCTGCTAGCGGTGAGCTTGGACTGTTACAAATGGTATCAGAGCCAGACACCGGATGGTGTGCCAACGAGGACGCTGGGCCTCAAGGGGGTGGATTGTGAGATCCCACATTGGTTAGAGATGGGAACGAAGCATCCCTTATAAGGGTGTGGAAACCTCTCCCTAGTAAACGCGTTTTAAAACCGTGAGGCTGATGGTAATATGAGCCAAAACAGACAATATTTGCTAGCGGTAGGCTTGGGCTGTTACAAATGGTATCAGAGTCAGACACCGAGTGGTGTGCCAGCGAGGATGCTGGGCCCGAATGGGGTGGATTGTGAGATCCCACATTGGTTGGAGAAGGGAACGAAACATCCTTTTATAAGTGCGTGAAAATTTCAGATGCATTTTAAAACCGTGAATCTGACTGTGATATAGGCTAAAGCGGATAATATCTGCTAGCGGTGGGCTTGGACTGTTACATGATACCTCTCTTCTGAGTTCGGTTCAAACCATTTGGCCTTTTCTCTTTTCCTCCTTCGTTGTTCACTTTCTTGCTATTCTCAGGGACACAGCTTATGACACCAGAGAGAAGAAGAGCTGTGTGGGCGATTTACGGTATCAGTCATTCTCTTCCTCCACCTTATTATCTTTCTATCTACTGCAAATTTTGTTCACTTCTGTAGACCAAGTTGCTTGTAGGACATGGCTGTGGACAGCCAAAGTATTGCTCCAAGTTCTAGCCATGTTCTCCTAGTAGTTTCTATTGATGACCCTCACATCATGAACGATCATGAACGTTTATGGACCTGTTACAAACTTTTTAAAGTTTAAGAATCGAATAGACACAAGTTAAAAGTTTCGAAACTTGTAAGACAACCTTTTTAAATAGAGGGTCTTAGGAGACCGATCCTGAAAGGGGAAAATCATTATCGAACGGGACCTAAGTTCTCGATCTGAAAATTTGAACCCGAGTTTGAAGGGTATCTCAAAACATCCTCAAGGATGATTCTTAATCACTACCTTTGCAGTCCTGTTACTTCAGTTTTGGACATTCAAGAGGGTAACTCTTTGTAATGCAGTGTGGTGCAGAAGGACCGACGAGCTCGTGGATGGACCTAATGCTTCACACATCACCCCTAAGGCTCTTGCTCGATGGGAAACACGACTAACTGATCTATTTGAAGGTCGACCGTATGATATGTATGATGCTGCTCTTTCCGATACAGTCTCAAAATACTTCGTCGACATTCAGGTAAACTTGATTTAGAGCCGGTTTGAAATGACTTTCTAAGTGCTTAAGAATTTATTGGTCTGCGCTTAAAATACGTTCATTTGTGATATGAGAAGTTTAGGCTGCCATGACAAAGGTCTTGTGAAACTTATGAAGAAATGAATGTTTTTGTCAGTACAAGAACAACAGAGAGCTTTTATCAGTAAAATTTGATCATCCTAGTTTAATGAGACGTGGCTCTTCATTGCTCTAATTTGAATTGGCAGTGCACGAGTTTGTTTAATGTAATCAAAAGCGTACGATTTAAAACGAGCGACAATGATTTAACTACTCTCGTCTTCGAGTAAAGGAGGTCTGGATCCTTTTTTTCATTTCTAGTTCCATTTGTGTGTTTTTTGATTCACTTGGCTTGAAACTATGCACGTTATGTTTCGACAGCCCTTCAAGGACATGATCGAAGGAATGAGGGTGGACTTGCGAAAATCACGATACGAAAACTTCGACGAGCTTTACCTTTATTGCTATTATGTAGCTGGAACTGTGGGGCTCATGAGTGTTCCTGTCATGGGATTGGCACCCGAGTCGAAAGCTTCAGTAGAGAGCGTCTACAATGCAGCATTGGCTCTCGGACTCGCCAATCAACTCACAAACATTCTTAGAGACGTCGGAGAAGAGTAAGCTTTCTTCCACCACCTTCTCATAACAGTGCAATGACTCAAGTCTACTGCTAACAGATGTTGTCTTCTAGGGAGAGGTTTTCACACCTTTGTAAAGAATGTTTTGTTTCCCTCTCCAACCGACGTGGAATCTTATATAAAGTTATATTACTTTTCGTGTTTACTTTTCCAACAGTGCTCGAAGGGGAAGAGTGTATCTCCCACAAGACGAGTTGGCACAAGCAGGGCTATGCGACGACGACATCTTCGAAGGGAAAGTGACAGAGAAGTGGCGGAGTTTCATGAAAGGGCAGATAAAAAGAGCAAGAAGGTTCTTTGATGAGGCTGAGAAGGGCATTGCAGAGCTGAGTGCAGCCAGTAGATGGCCAGTATGGGCATCCCTAATGCTTTACAAGCAAATATTAGATTCCATTGAAGCAAATGACTATGACAACTTCACCAAAAGGGCATATGTAAGCAAAGCCAAGAAATTGCTATCACTTCCCATAGCCTTTGGAAGAGCTATGATGAGCCCTTCAAACTCAAAGATTTGGTAACAAAATAGATTTTTTTTTTTTTTTTCCATTATGTACGTACGTATGTATATAGGCAAGGTGAGGGACGGGGAATATAATTTCCGTCTCTAGCCCGGTTTAGCTATGGAAAAATCTCTCCTTACTCCCGATTTAAGTGGGGACTCTTCACGAGGCAGGACTCTAGTCTCGAAAAGTAGTATTAACATTCTTTGTGTACCATATTCCCAAAAAATAGAAAATTCCATTGGATCCACTAGAAAAGTGCC

mRNA sequence

TCCACCAATCCTCCCATGTGTGATCTTTAAGGATGAGAGAGAGGGCATATTCCCTCCCACGCTCTGGCTTTCAAGGGGAGTGAGTGCTTTTTGAACCCCCAATTGAGAAGTTTTTGATTCCTTGTTCTTCCTTCAATCCAAAATGGCCAAGAAATTGATAGTCACCCATTTACTCTCCTCTTTCTCTCGCTGAATCCACCAAATAAGGGTGCGGGGAGGGGAGAAGAAGCAGGGCCGAGGGGGGTTTGTGGGTGGTTGTGAAGAAGATGTCTGGTGTCAATGCCAATGCTCTGCTCAGCCCCAAGCCGAGAATCAGAATCGGGTGCAAGCCAATTGGGTGTAAGAGATTGAGTCGTTTTTGTGGTGGGGTTTGGGGTTCCTCTGCTGTGGTAGCGAACCCTTCAAGATCGGCTGAAGAAAGGGTGTATGAAGTGGTGTTGAAGCAAGCGGCTCTTGTGAGGGAACCCAGAAAGGATCGAGAGAGAGGTTTGGATTGGGAGAAAACCATACAAAATGAAGGCAGTATCAGTGATGATGGGAATCTCTTGAATGAGGCTTATGCTCGATGTGGTGAGGTCTGTGCTGAATATGCCAAAACGTTTTACTTGGGGACACAGCTTATGACACCAGAGAGAAGAAGAGCTGTGTGGGCGATTTACGTGTGGTGCAGAAGGACCGACGAGCTCGTGGATGGACCTAATGCTTCACACATCACCCCTAAGGCTCTTGCTCGATGGGAAACACGACTAACTGATCTATTTGAAGGTCGACCGTATGATATGTATGATGCTGCTCTTTCCGATACAGTCTCAAAATACTTCGTCGACATTCAGTGCACGAGTTTGTTTAATGTAATCAAAAGCCCCTTCAAGGACATGATCGAAGGAATGAGGGTGGACTTGCGAAAATCACGATACGAAAACTTCGACGAGCTTTACCTTTATTGCTATTATGTAGCTGGAACTGTGGGGCTCATGAGTGTTCCTGTCATGGGATTGGCACCCGAGTCGAAAGCTTCAGTAGAGAGCGTCTACAATGCAGCATTGGCTCTCGGACTCGCCAATCAACTCACAAACATTCTTAGAGACGTCGGAGAAGATGCTCGAAGGGGAAGAGTGTATCTCCCACAAGACGAGTTGGCACAAGCAGGGCTATGCGACGACGACATCTTCGAAGGGAAAGTGACAGAGAAGTGGCGGAGTTTCATGAAAGGGCAGATAAAAAGAGCAAGAAGGTTCTTTGATGAGGCTGAGAAGGGCATTGCAGAGCTGAGTGCAGCCAGTAGATGGCCAGTATGGGCATCCCTAATGCTTTACAAGCAAATATTAGATTCCATTGAAGCAAATGACTATGACAACTTCACCAAAAGGGCATATGTAAGCAAAGCCAAGAAATTGCTATCACTTCCCATAGCCTTTGGAAGAGCTATGATGAGCCCTTCAAACTCAAAGATTTGGTAACAAAATAGATTTTTTTTTTTTTTTTCCATTATGTACGTACGTATGTATATAGGCAAGGTGAGGGACGGGGAATATAATTTCCGTCTCTAGCCCGGTTTAGCTATGGAAAAATCTCTCCTTACTCCCGATTTAAGTGGGGACTCTTCACGAGGCAGGACTCTAGTCTCGAAAAGTAGTATTAACATTCTTTGTGTACCATATTCCCAAAAAATAGAAAATTCCATTGGATCCACTAGAAAAGTGCC

Coding sequence (CDS)

ATGTCTGGTGTCAATGCCAATGCTCTGCTCAGCCCCAAGCCGAGAATCAGAATCGGGTGCAAGCCAATTGGGTGTAAGAGATTGAGTCGTTTTTGTGGTGGGGTTTGGGGTTCCTCTGCTGTGGTAGCGAACCCTTCAAGATCGGCTGAAGAAAGGGTGTATGAAGTGGTGTTGAAGCAAGCGGCTCTTGTGAGGGAACCCAGAAAGGATCGAGAGAGAGGTTTGGATTGGGAGAAAACCATACAAAATGAAGGCAGTATCAGTGATGATGGGAATCTCTTGAATGAGGCTTATGCTCGATGTGGTGAGGTCTGTGCTGAATATGCCAAAACGTTTTACTTGGGGACACAGCTTATGACACCAGAGAGAAGAAGAGCTGTGTGGGCGATTTACGTGTGGTGCAGAAGGACCGACGAGCTCGTGGATGGACCTAATGCTTCACACATCACCCCTAAGGCTCTTGCTCGATGGGAAACACGACTAACTGATCTATTTGAAGGTCGACCGTATGATATGTATGATGCTGCTCTTTCCGATACAGTCTCAAAATACTTCGTCGACATTCAGTGCACGAGTTTGTTTAATGTAATCAAAAGCCCCTTCAAGGACATGATCGAAGGAATGAGGGTGGACTTGCGAAAATCACGATACGAAAACTTCGACGAGCTTTACCTTTATTGCTATTATGTAGCTGGAACTGTGGGGCTCATGAGTGTTCCTGTCATGGGATTGGCACCCGAGTCGAAAGCTTCAGTAGAGAGCGTCTACAATGCAGCATTGGCTCTCGGACTCGCCAATCAACTCACAAACATTCTTAGAGACGTCGGAGAAGATGCTCGAAGGGGAAGAGTGTATCTCCCACAAGACGAGTTGGCACAAGCAGGGCTATGCGACGACGACATCTTCGAAGGGAAAGTGACAGAGAAGTGGCGGAGTTTCATGAAAGGGCAGATAAAAAGAGCAAGAAGGTTCTTTGATGAGGCTGAGAAGGGCATTGCAGAGCTGAGTGCAGCCAGTAGATGGCCAGTATGGGCATCCCTAATGCTTTACAAGCAAATATTAGATTCCATTGAAGCAAATGACTATGACAACTTCACCAAAAGGGCATATGTAAGCAAAGCCAAGAAATTGCTATCACTTCCCATAGCCTTTGGAAGAGCTATGATGAGCCCTTCAAACTCAAAGATTTGGTAA

Protein sequence

MSGVNANALLSPKPRIRIGCKPIGCKRLSRFCGGVWGSSAVVANPSRSAEERVYEVVLKQAALVREPRKDRERGLDWEKTIQNEGSISDDGNLLNEAYARCGEVCAEYAKTFYLGTQLMTPERRRAVWAIYVWCRRTDELVDGPNASHITPKALARWETRLTDLFEGRPYDMYDAALSDTVSKYFVDIQCTSLFNVIKSPFKDMIEGMRVDLRKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAPESKASVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFEGKVTEKWRSFMKGQIKRARRFFDEAEKGIAELSAASRWPVWASLMLYKQILDSIEANDYDNFTKRAYVSKAKKLLSLPIAFGRAMMSPSNSKIW

Homology

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BLAST of CmoCh16G005120 vs. ExPASy Swiss-Prot
Match: Q9SSU8 (Phytoene synthase, chloroplastic OS=Daucus carota OX=4039 GN=PSY PE=2 SV=1)

HSP 1 Score: 552.7 bits (1423), Expect = 3.3e-156
Identity = 278/364 (76.37%), Postives = 311/364 (85.44%), Query Frame = 0


Query: 37  GSSAVVANPSRSAEERVYEVVLKQAALVR-EPRKDRERGLDWEKT-------IQNEGSIS 96
           G SAV ANP R++EERVYEVVLKQAALVR E R  R   LD ++T        +N+ +  
Sbjct: 42  GVSAVAANPVRTSEERVYEVVLKQAALVREEKRSSRGLCLDTKRTGSKSFDKSENDDAGM 101

Query: 97  DDGNLLNEAYARCGEVCAEYAKTFYLGTQLMTPERRRAVWAIYVWCRRTDELVDGPNASH 156
              NLLNEAY RCGEVCAEYAKTFYLGT LMTPERRRAVWAIYVWCRRTDELVDGPNASH
Sbjct: 102 KSWNLLNEAYDRCGEVCAEYAKTFYLGTLLMTPERRRAVWAIYVWCRRTDELVDGPNASH 161

Query: 157 ITPKALARWETRLTDLFEGRPYDMYDAALSDTVSKYFVDIQCTSLFNVIKSPFKDMIEGM 216
           ITPKAL RWE RL DLF+G+PYDMYDAAL+DTVS Y VDIQ          PFKDMI+GM
Sbjct: 162 ITPKALDRWEKRLNDLFDGQPYDMYDAALADTVSTYPVDIQ----------PFKDMIDGM 221

Query: 217 RVDLRKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAPESKASVESVYNAALALGLANQL 276
           R+DL+KSRY+ FDELYLYCYYVAGTVGLMSVPVMG+APESKA+ ESVY+AALALG+ANQL
Sbjct: 222 RMDLKKSRYQTFDELYLYCYYVAGTVGLMSVPVMGIAPESKATTESVYSAALALGIANQL 281

Query: 277 TNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFEGKVTEKWRSFMKGQIKRARRFFDEA 336
           TNILRDVGEDARRGR+YLPQ+EL  AG+  + IF+GKVT+KWRSFMKGQIKRAR FFDEA
Sbjct: 282 TNILRDVGEDARRGRIYLPQEELKLAGITPEYIFKGKVTDKWRSFMKGQIKRARMFFDEA 341

Query: 337 EKGIAELSAASRWPVWASLMLYKQILDSIEANDYDNFTKRAYVSKAKKLLSLPIAFGRAM 393
           EKG+AELS+ASRWPVWASL+LYKQILD+IEANDYDNFTKRAYV KAKKL+SLP+A+ RA+
Sbjct: 342 EKGVAELSSASRWPVWASLLLYKQILDAIEANDYDNFTKRAYVGKAKKLVSLPLAYSRAL 395

[Close]

BLAST of CmoCh16G005120 vs. ExPASy Swiss-Prot
Match: P49293 (Phytoene synthase, chloroplastic OS=Cucumis melo OX=3656 GN=PSY PE=2 SV=1)

HSP 1 Score: 527.3 bits (1357), Expect = 1.5e-148
Identity = 267/360 (74.17%), Postives = 308/360 (85.56%), Query Frame = 0


Query: 39  SAVVANPSR----SAEERVYEVVLKQAALVREPRKDRERG-LDWEKTIQNEGSISDDGNL 98
           +++VANP+     SAE++VY VV+KQAALV+  R+ R  G LD +  I   G++S    L
Sbjct: 79  ASMVANPAGEIAVSAEQKVYNVVMKQAALVK--RQLRTAGELDVKPDIVLPGTLS----L 138

Query: 99  LNEAYARCGEVCAEYAKTFYLGTQLMTPERRRAVWAIYVWCRRTDELVDGPNASHITPKA 158
           LNEAY RCGEVCAEYAKTFYLGT LMTPER++A+WAIYVWCRRTDELVDGPNASHITP A
Sbjct: 139 LNEAYDRCGEVCAEYAKTFYLGTMLMTPERQKAIWAIYVWCRRTDELVDGPNASHITPTA 198

Query: 159 LARWETRLTDLFEGRPYDMYDAALSDTVSKYFVDIQCTSLFNVIKSPFKDMIEGMRVDLR 218
           L RWE RL +LF+GRP+DM DAAL+DTV+K+ VDIQ          PFKDMIEGMR+DLR
Sbjct: 199 LDRWEARLEELFQGRPFDMLDAALADTVTKFPVDIQ----------PFKDMIEGMRMDLR 258

Query: 219 KSRYENFDELYLYCYYVAGTVGLMSVPVMGLAPESKASVESVYNAALALGLANQL-TNIL 278
           KSRY+NFDELYLYCYYVAGTVGLMSVPVMG+APES+AS ESVYNAALALG+ANQ   NIL
Sbjct: 259 KSRYKNFDELYLYCYYVAGTVGLMSVPVMGIAPESQASTESVYNAALALGIANQAPPNIL 318

Query: 279 RDVGEDARRGRVYLPQDELAQAGLCDDDIFEGKVTEKWRSFMKGQIKRARRFFDEAEKGI 338
           RDVGEDARRGR+YLPQDELAQAGL D+DIF G+VT+KWR+FMK QIKRAR FFDEAEKG+
Sbjct: 319 RDVGEDARRGRIYLPQDELAQAGLSDEDIFAGRVTDKWRNFMKNQIKRARMFFDEAEKGV 378

Query: 339 AELSAASRWPVWASLMLYKQILDSIEANDYDNFTKRAYVSKAKKLLSLPIAFGRAMMSPS 393
            EL+ ASRWPVWASL+LY+QILD IEANDYDNFTKRAYVSKAKK+L+LP+A+GRA++ PS
Sbjct: 379 LELNKASRWPVWASLLLYRQILDEIEANDYDNFTKRAYVSKAKKILALPMAYGRALLGPS 422

[Close]

BLAST of CmoCh16G005120 vs. ExPASy Swiss-Prot
Match: P53797 (Phytoene synthase, chloroplastic OS=Narcissus pseudonarcissus OX=39639 GN=PSY PE=2 SV=1)

HSP 1 Score: 523.9 bits (1348), Expect = 1.6e-147
Identity = 257/357 (71.99%), Postives = 300/357 (84.03%), Query Frame = 0


Query: 39  SAVVANPSR----SAEERVYEVVLKQAALVREPRKDRERGLDWEKTIQNEGSISDDGNLL 98
           S++VANP+     S+E++VY+VVLKQAALV++  K   +  D +  I   G++     LL
Sbjct: 70  SSLVANPAGEATISSEQKVYDVVLKQAALVKDQTKSSRKSTDVKPDIVLPGTV----YLL 129

Query: 99  NEAYARCGEVCAEYAKTFYLGTQLMTPERRRAVWAIYVWCRRTDELVDGPNASHITPKAL 158
            +AY RCGEVCAEYAKTFYLGT LMTPERRRA+WAIYVWCRRTDELVDG NASHITP AL
Sbjct: 130 KDAYDRCGEVCAEYAKTFYLGTLLMTPERRRAIWAIYVWCRRTDELVDGHNASHITPSAL 189

Query: 159 ARWETRLTDLFEGRPYDMYDAALSDTVSKYFVDIQCTSLFNVIKSPFKDMIEGMRVDLRK 218
            RWE RL DLF GRPYDM+DAALSDTVS++ VDIQ          PF DM+EGMR+DL+K
Sbjct: 190 DRWEARLEDLFAGRPYDMFDAALSDTVSRFPVDIQ----------PFMDMVEGMRMDLKK 249

Query: 219 SRYENFDELYLYCYYVAGTVGLMSVPVMGLAPESKASVESVYNAALALGLANQLTNILRD 278
           SRY+NFDELYLYCYYVAGTVGLMSVPVMG+APES A  ESVYNAALALG+ANQLTNILRD
Sbjct: 250 SRYKNFDELYLYCYYVAGTVGLMSVPVMGIAPESLAEAESVYNAALALGIANQLTNILRD 309

Query: 279 VGEDARRGRVYLPQDELAQAGLCDDDIFEGKVTEKWRSFMKGQIKRARRFFDEAEKGIAE 338
           VGEDARRGR+YLPQDELA+AGL D+D+F GKVT+KWRSFMK QIKRAR FF++AEKG+ E
Sbjct: 310 VGEDARRGRIYLPQDELAEAGLSDEDVFTGKVTDKWRSFMKRQIKRARTFFEQAEKGVTE 369

Query: 339 LSAASRWPVWASLMLYKQILDSIEANDYDNFTKRAYVSKAKKLLSLPIAFGRAMMSP 392
           LS ASRWPVWASL+LY+QILD IEANDY+NFTKRAYVSK K+L +LP+A+G++++ P
Sbjct: 370 LSQASRWPVWASLLLYRQILDEIEANDYNNFTKRAYVSKVKRLAALPLAYGKSLLIP 412

[Close]

BLAST of CmoCh16G005120 vs. ExPASy Swiss-Prot
Match: P37271 (Phytoene synthase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSY1 PE=1 SV=2)

HSP 1 Score: 523.5 bits (1347), Expect = 2.1e-147
Identity = 261/365 (71.51%), Postives = 306/365 (83.84%), Query Frame = 0


Query: 38  SSAVVANPS----RSAEERVYEVVLKQAALVREPRKDRERGLDWEK--TIQNEGSISDDG 97
           SS++VA+PS     S+EE+VY VVLKQAALV +  +     LD +K   +   GS+S   
Sbjct: 70  SSSLVASPSGEIALSSEEKVYNVVLKQAALVNKQLRSSSYDLDVKKPQDVVLPGSLS--- 129

Query: 98  NLLNEAYARCGEVCAEYAKTFYLGTQLMTPERRRAVWAIYVWCRRTDELVDGPNASHITP 157
            LL EAY RCGEVCAEYAKTFYLGT LMTPERR+A+WAIYVWCRRTDELVDGPNASHITP
Sbjct: 130 -LLGEAYDRCGEVCAEYAKTFYLGTLLMTPERRKAIWAIYVWCRRTDELVDGPNASHITP 189

Query: 158 KALARWETRLTDLFEGRPYDMYDAALSDTVSKYFVDIQCTSLFNVIKSPFKDMIEGMRVD 217
            AL RWE RL DLF GRP+DM DAAL+DTV++Y VDIQ          PF+DMIEGMR+D
Sbjct: 190 MALDRWEARLEDLFRGRPFDMLDAALADTVARYPVDIQ----------PFRDMIEGMRMD 249

Query: 218 LRKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAPESKASVESVYNAALALGLANQLTNI 277
           L+KSRY+NFD+LYLYCYYVAGTVGLMSVPVMG+ P+SKA+ ESVYNAALALG+ANQLTNI
Sbjct: 250 LKKSRYQNFDDLYLYCYYVAGTVGLMSVPVMGIDPKSKATTESVYNAALALGIANQLTNI 309

Query: 278 LRDVGEDARRGRVYLPQDELAQAGLCDDDIFEGKVTEKWRSFMKGQIKRARRFFDEAEKG 337
           LRDVGEDARRGRVYLPQDELAQAGL D+DIF GKVT+KWR+FMK Q+KRAR FFDEAEKG
Sbjct: 310 LRDVGEDARRGRVYLPQDELAQAGLSDEDIFAGKVTDKWRNFMKMQLKRARMFFDEAEKG 369

Query: 338 IAELSAASRWPVWASLMLYKQILDSIEANDYDNFTKRAYVSKAKKLLSLPIAFGRAMMSP 397
           + ELSAASRWPVWASL+LY++ILD IEANDY+NFTKRAYV K KK+ +LP+A+ ++++  
Sbjct: 370 VTELSAASRWPVWASLLLYRRILDEIEANDYNNFTKRAYVGKVKKIAALPLAYAKSVLKT 420

[Close]

BLAST of CmoCh16G005120 vs. ExPASy Swiss-Prot
Match: Q2QLV9 (Phytoene synthase 2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=PSY2 PE=1 SV=1)

HSP 1 Score: 518.5 bits (1334), Expect = 6.8e-146
Identity = 263/350 (75.14%), Postives = 293/350 (83.71%), Query Frame = 0


Query: 42  VANPSRSAEERVYEVVLKQAALVREPRKDRERGLD-WEKTIQNEGSISDDGNLLNEAYAR 101
           VA+   +AEE VYEVVL+QAALV E    R  G   W      E    D G LL +AY R
Sbjct: 63  VASRRTAAEEAVYEVVLRQAALVEEATHRRGAGAPRWA-----EEDAVDWGLLLGDAYHR 122

Query: 102 CGEVCAEYAKTFYLGTQLMTPERRRAVWAIYVWCRRTDELVDGPNASHITPKALARWETR 161
           CGEVCAEYAKTFYLGTQLMTPERR+AVWAIYVWCRRTDELVDGPN+S+ITPKAL RWE R
Sbjct: 123 CGEVCAEYAKTFYLGTQLMTPERRKAVWAIYVWCRRTDELVDGPNSSYITPKALDRWEKR 182

Query: 162 LTDLFEGRPYDMYDAALSDTVSKYFVDIQCTSLFNVIKSPFKDMIEGMRVDLRKSRYENF 221
           L DLFEGRPYDMYDAALSDTVSK+ VDIQ          PFKDMIEGMR+DL KSRY +F
Sbjct: 183 LEDLFEGRPYDMYDAALSDTVSKFPVDIQ----------PFKDMIEGMRLDLWKSRYRSF 242

Query: 222 DELYLYCYYVAGTVGLMSVPVMGLAPESKASVESVYNAALALGLANQLTNILRDVGEDAR 281
           DELYLYCYYVAGTVGLM+VPVMG+AP+SKAS ESVYNAALALG+ANQLTNILRDVGED+R
Sbjct: 243 DELYLYCYYVAGTVGLMTVPVMGIAPDSKASTESVYNAALALGIANQLTNILRDVGEDSR 302

Query: 282 RGRVYLPQDELAQAGLCDDDIFEGKVTEKWRSFMKGQIKRARRFFDEAEKGIAELSAASR 341
           RGR+YLP DELA+AGL ++DIF GKVT+KWR FMKGQI RAR FFDEAEKG+A L +ASR
Sbjct: 303 RGRIYLPLDELAEAGLTEEDIFRGKVTDKWRKFMKGQILRARLFFDEAEKGVAHLDSASR 362

Query: 342 WPVWASLMLYKQILDSIEANDYDNFTKRAYVSKAKKLLSLPIAFGRAMMS 391
           WPV ASL LY+QILD+IEANDY+NFTKRAYV+KAKKLLSLP+A+ RA ++
Sbjct: 363 WPVLASLWLYRQILDAIEANDYNNFTKRAYVNKAKKLLSLPVAYARAAVA 397

[Close]

BLAST of CmoCh16G005120 vs. ExPASy TrEMBL
Match: A0A6J1ETX4 (phytoene synthase 2, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111437685 PE=3 SV=1)

HSP 1 Score: 781.2 bits (2016), Expect = 2.1e-222
Identity = 387/397 (97.48%), Postives = 387/397 (97.48%), Query Frame = 0


Query: 1   MSGVNANALLSPKPRIRIGCKPIGCKRLSRFCGGVWGSSAVVANPSRSAEERVYEVVLKQ 60
           MSGVNANALLSPKPRIRIGCKPIGCKRLSRFCGGVWGSSAVVANPSRSAEERVYEVVLKQ
Sbjct: 1   MSGVNANALLSPKPRIRIGCKPIGCKRLSRFCGGVWGSSAVVANPSRSAEERVYEVVLKQ 60

Query: 61  AALVREPRKDRERGLDWEKTIQNEGSISDDGNLLNEAYARCGEVCAEYAKTFYLGTQLMT 120
           AALVREPRKDRERGLDWEKTIQNEGSISDDGNLLNEAYARCGEVCAEYAKTFYLGTQLMT
Sbjct: 61  AALVREPRKDRERGLDWEKTIQNEGSISDDGNLLNEAYARCGEVCAEYAKTFYLGTQLMT 120

Query: 121 PERRRAVWAIYVWCRRTDELVDGPNASHITPKALARWETRLTDLFEGRPYDMYDAALSDT 180
           PERRRAVWAIYVWCRRTDELVDGPNASHITPKALARWETRLTDLFEGRPYDMYDAALSDT
Sbjct: 121 PERRRAVWAIYVWCRRTDELVDGPNASHITPKALARWETRLTDLFEGRPYDMYDAALSDT 180

Query: 181 VSKYFVDIQCTSLFNVIKSPFKDMIEGMRVDLRKSRYENFDELYLYCYYVAGTVGLMSVP 240
           VSKYFVDIQ          PFKDMIEGMRVDLRKSRYENFDELYLYCYYVAGTVGLMSVP
Sbjct: 181 VSKYFVDIQ----------PFKDMIEGMRVDLRKSRYENFDELYLYCYYVAGTVGLMSVP 240

Query: 241 VMGLAPESKASVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDD 300
           VMGLAPESKASVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDD
Sbjct: 241 VMGLAPESKASVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDD 300

Query: 301 IFEGKVTEKWRSFMKGQIKRARRFFDEAEKGIAELSAASRWPVWASLMLYKQILDSIEAN 360
           IFEGKVTEKWRSFMKGQIKRARRFFDEAEKGIAELSAASRWPVWASLMLYKQILDSIEAN
Sbjct: 301 IFEGKVTEKWRSFMKGQIKRARRFFDEAEKGIAELSAASRWPVWASLMLYKQILDSIEAN 360

Query: 361 DYDNFTKRAYVSKAKKLLSLPIAFGRAMMSPSNSKIW 398
           DYDNFTKRAYVSKAKKLLSLPIAFGRAMMSPSNSKIW
Sbjct: 361 DYDNFTKRAYVSKAKKLLSLPIAFGRAMMSPSNSKIW 387

[Close]

BLAST of CmoCh16G005120 vs. ExPASy TrEMBL
Match: A0A6J1JCY2 (phytoene synthase 2, chloroplastic-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111483355 PE=3 SV=1)

HSP 1 Score: 775.0 bits (2000), Expect = 1.5e-220
Identity = 382/397 (96.22%), Postives = 386/397 (97.23%), Query Frame = 0


Query: 1   MSGVNANALLSPKPRIRIGCKPIGCKRLSRFCGGVWGSSAVVANPSRSAEERVYEVVLKQ 60
           MSGVNANALLSPKPRIRIGC+PIGCKRLSRFCGGVWGSSAVVANPSRSAEERVYEVVLKQ
Sbjct: 1   MSGVNANALLSPKPRIRIGCRPIGCKRLSRFCGGVWGSSAVVANPSRSAEERVYEVVLKQ 60

Query: 61  AALVREPRKDRERGLDWEKTIQNEGSISDDGNLLNEAYARCGEVCAEYAKTFYLGTQLMT 120
           AALVREPRKDRERGLDWEKTI+NEGSISDDGNLLNEAYARCGEVCAEYAKTFYLGTQLMT
Sbjct: 61  AALVREPRKDRERGLDWEKTIENEGSISDDGNLLNEAYARCGEVCAEYAKTFYLGTQLMT 120

Query: 121 PERRRAVWAIYVWCRRTDELVDGPNASHITPKALARWETRLTDLFEGRPYDMYDAALSDT 180
           PERRRAVWAIYVWCRRTDELVDGPNASHITPKALARWETRLTDLFEGRPYDMYDAALSDT
Sbjct: 121 PERRRAVWAIYVWCRRTDELVDGPNASHITPKALARWETRLTDLFEGRPYDMYDAALSDT 180

Query: 181 VSKYFVDIQCTSLFNVIKSPFKDMIEGMRVDLRKSRYENFDELYLYCYYVAGTVGLMSVP 240
           VSKYFVDIQ          PFKDMIEGMRVD+RKSRYENFDELYLYCYYVAGTVGLMSVP
Sbjct: 181 VSKYFVDIQ----------PFKDMIEGMRVDMRKSRYENFDELYLYCYYVAGTVGLMSVP 240

Query: 241 VMGLAPESKASVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDD 300
           VMGLAPESKASVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDD
Sbjct: 241 VMGLAPESKASVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDD 300

Query: 301 IFEGKVTEKWRSFMKGQIKRARRFFDEAEKGIAELSAASRWPVWASLMLYKQILDSIEAN 360
           IFEGKVTEKWRSFMKGQIKRARRFFDEAEKGIAELSAASRWPVWASLMLYKQILDSIEAN
Sbjct: 301 IFEGKVTEKWRSFMKGQIKRARRFFDEAEKGIAELSAASRWPVWASLMLYKQILDSIEAN 360

Query: 361 DYDNFTKRAYVSKAKKLLSLPIAFGRAMMSPSNSKIW 398
           DYDNFT+RAYVSKAKKLLSLPIAFGRAMM PSNSKIW
Sbjct: 361 DYDNFTQRAYVSKAKKLLSLPIAFGRAMMGPSNSKIW 387

[Close]

BLAST of CmoCh16G005120 vs. ExPASy TrEMBL
Match: A0A6J1ETY1 (phytoene synthase 2, chloroplastic-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111437685 PE=3 SV=1)

HSP 1 Score: 734.6 bits (1895), Expect = 2.2e-208
Identity = 370/397 (93.20%), Postives = 370/397 (93.20%), Query Frame = 0


Query: 1   MSGVNANALLSPKPRIRIGCKPIGCKRLSRFCGGVWGSSAVVANPSRSAEERVYEVVLKQ 60
           MSGVNANALLSPKPRIRIGCKPIGCKRLSRFCGGVWGSSAVVANPSRSAEERVYEVVLKQ
Sbjct: 1   MSGVNANALLSPKPRIRIGCKPIGCKRLSRFCGGVWGSSAVVANPSRSAEERVYEVVLKQ 60

Query: 61  AALVREPRKDRERGLDWEKTIQNEGSISDDGNLLNEAYARCGEVCAEYAKTFYLGTQLMT 120
           AALVREPRKDRERGLDWEKTIQNEGSISDDGNLLNEAYARCGEVCAEYAKTFYL      
Sbjct: 61  AALVREPRKDRERGLDWEKTIQNEGSISDDGNLLNEAYARCGEVCAEYAKTFYL------ 120

Query: 121 PERRRAVWAIYVWCRRTDELVDGPNASHITPKALARWETRLTDLFEGRPYDMYDAALSDT 180
                      VWCRRTDELVDGPNASHITPKALARWETRLTDLFEGRPYDMYDAALSDT
Sbjct: 121 -----------VWCRRTDELVDGPNASHITPKALARWETRLTDLFEGRPYDMYDAALSDT 180

Query: 181 VSKYFVDIQCTSLFNVIKSPFKDMIEGMRVDLRKSRYENFDELYLYCYYVAGTVGLMSVP 240
           VSKYFVDIQ          PFKDMIEGMRVDLRKSRYENFDELYLYCYYVAGTVGLMSVP
Sbjct: 181 VSKYFVDIQ----------PFKDMIEGMRVDLRKSRYENFDELYLYCYYVAGTVGLMSVP 240

Query: 241 VMGLAPESKASVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDD 300
           VMGLAPESKASVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDD
Sbjct: 241 VMGLAPESKASVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDD 300

Query: 301 IFEGKVTEKWRSFMKGQIKRARRFFDEAEKGIAELSAASRWPVWASLMLYKQILDSIEAN 360
           IFEGKVTEKWRSFMKGQIKRARRFFDEAEKGIAELSAASRWPVWASLMLYKQILDSIEAN
Sbjct: 301 IFEGKVTEKWRSFMKGQIKRARRFFDEAEKGIAELSAASRWPVWASLMLYKQILDSIEAN 360

Query: 361 DYDNFTKRAYVSKAKKLLSLPIAFGRAMMSPSNSKIW 398
           DYDNFTKRAYVSKAKKLLSLPIAFGRAMMSPSNSKIW
Sbjct: 361 DYDNFTKRAYVSKAKKLLSLPIAFGRAMMSPSNSKIW 370

[Close]

BLAST of CmoCh16G005120 vs. ExPASy TrEMBL
Match: A0A6J1JAZ9 (phytoene synthase 2, chloroplastic-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111483355 PE=3 SV=1)

HSP 1 Score: 728.4 bits (1879), Expect = 1.6e-206
Identity = 365/397 (91.94%), Postives = 369/397 (92.95%), Query Frame = 0


Query: 1   MSGVNANALLSPKPRIRIGCKPIGCKRLSRFCGGVWGSSAVVANPSRSAEERVYEVVLKQ 60
           MSGVNANALLSPKPRIRIGC+PIGCKRLSRFCGGVWGSSAVVANPSRSAEERVYEVVLKQ
Sbjct: 1   MSGVNANALLSPKPRIRIGCRPIGCKRLSRFCGGVWGSSAVVANPSRSAEERVYEVVLKQ 60

Query: 61  AALVREPRKDRERGLDWEKTIQNEGSISDDGNLLNEAYARCGEVCAEYAKTFYLGTQLMT 120
           AALVREPRKDRERGLDWEKTI+NEGSISDDGNLLNEAYARCGEVCAEYAKTFYL      
Sbjct: 61  AALVREPRKDRERGLDWEKTIENEGSISDDGNLLNEAYARCGEVCAEYAKTFYL------ 120

Query: 121 PERRRAVWAIYVWCRRTDELVDGPNASHITPKALARWETRLTDLFEGRPYDMYDAALSDT 180
                      VWCRRTDELVDGPNASHITPKALARWETRLTDLFEGRPYDMYDAALSDT
Sbjct: 121 -----------VWCRRTDELVDGPNASHITPKALARWETRLTDLFEGRPYDMYDAALSDT 180

Query: 181 VSKYFVDIQCTSLFNVIKSPFKDMIEGMRVDLRKSRYENFDELYLYCYYVAGTVGLMSVP 240
           VSKYFVDIQ          PFKDMIEGMRVD+RKSRYENFDELYLYCYYVAGTVGLMSVP
Sbjct: 181 VSKYFVDIQ----------PFKDMIEGMRVDMRKSRYENFDELYLYCYYVAGTVGLMSVP 240

Query: 241 VMGLAPESKASVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDD 300
           VMGLAPESKASVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDD
Sbjct: 241 VMGLAPESKASVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDD 300

Query: 301 IFEGKVTEKWRSFMKGQIKRARRFFDEAEKGIAELSAASRWPVWASLMLYKQILDSIEAN 360
           IFEGKVTEKWRSFMKGQIKRARRFFDEAEKGIAELSAASRWPVWASLMLYKQILDSIEAN
Sbjct: 301 IFEGKVTEKWRSFMKGQIKRARRFFDEAEKGIAELSAASRWPVWASLMLYKQILDSIEAN 360

Query: 361 DYDNFTKRAYVSKAKKLLSLPIAFGRAMMSPSNSKIW 398
           DYDNFT+RAYVSKAKKLLSLPIAFGRAMM PSNSKIW
Sbjct: 361 DYDNFTQRAYVSKAKKLLSLPIAFGRAMMGPSNSKIW 370

[Close]

BLAST of CmoCh16G005120 vs. ExPASy TrEMBL
Match: A0A0A0KVC2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G063980 PE=3 SV=1)

HSP 1 Score: 692.6 bits (1786), Expect = 9.8e-196
Identity = 349/395 (88.35%), Postives = 359/395 (90.89%), Query Frame = 0


Query: 1   MSGVNANALLSPKPRIRIGCKPIGCKRLSRFCGGVWGSSAVVANPSRSAEERVYEVVLKQ 60
           MSGVNAN+LL PKPRIRI   P G KRLS F  GV  SSA VANPSRS+EERVYEVVLKQ
Sbjct: 1   MSGVNANSLLIPKPRIRISSSPFGSKRLSFFSDGVLASSAAVANPSRSSEERVYEVVLKQ 60

Query: 61  AALVREPRKDRERGLDWEKTIQNEGSISDDGNLLNEAYARCGEVCAEYAKTFYLGTQLMT 120
           AALVREP++D +R LDWEKTIQNEG    DGNLL+EAYARCGEVCAEYAKTFYLGTQLMT
Sbjct: 61  AALVREPKRDVQRALDWEKTIQNEG--ITDGNLLSEAYARCGEVCAEYAKTFYLGTQLMT 120

Query: 121 PERRRAVWAIYVWCRRTDELVDGPNASHITPKALARWETRLTDLFEGRPYDMYDAALSDT 180
           PERRRAVWAIYVWCRRTDELVDGPNASHITPKAL RWE RLTDLFEGRPYDMYDAALSDT
Sbjct: 121 PERRRAVWAIYVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRPYDMYDAALSDT 180

Query: 181 VSKYFVDIQCTSLFNVIKSPFKDMIEGMRVDLRKSRYENFDELYLYCYYVAGTVGLMSVP 240
           VSKY VDIQ          PFKDMIEGMR+DLRKSRYENFDELYLYCYYVAGTVGLMSVP
Sbjct: 181 VSKYPVDIQ----------PFKDMIEGMRLDLRKSRYENFDELYLYCYYVAGTVGLMSVP 240

Query: 241 VMGLAPESKASVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDD 300
           VMGLAPESKASVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDD
Sbjct: 241 VMGLAPESKASVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDD 300

Query: 301 IFEGKVTEKWRSFMKGQIKRARRFFDEAEKGIAELSAASRWPVWASLMLYKQILDSIEAN 360
           IF GKVT+KWR FMKGQIKRARRFFDEAEKG+AELSAASRWPVWASLMLYKQILDSIEAN
Sbjct: 301 IFRGKVTDKWRFFMKGQIKRARRFFDEAEKGVAELSAASRWPVWASLMLYKQILDSIEAN 360

Query: 361 DYDNFTKRAYVSKAKKLLSLPIAFGRAMMSPSNSK 396
           DYDNFTKRAYV KAKKLLSLPIAFGRAM+ PSN K
Sbjct: 361 DYDNFTKRAYVGKAKKLLSLPIAFGRAMVGPSNLK 383

[Close]

BLAST of CmoCh16G005120 vs. TAIR 10
Match: AT5G17230.1 (PHYTOENE SYNTHASE )

HSP 1 Score: 523.5 bits (1347), Expect = 1.5e-148
Identity = 261/365 (71.51%), Postives = 306/365 (83.84%), Query Frame = 0


Query: 38  SSAVVANPS----RSAEERVYEVVLKQAALVREPRKDRERGLDWEK--TIQNEGSISDDG 97
           SS++VA+PS     S+EE+VY VVLKQAALV +  +     LD +K   +   GS+S   
Sbjct: 70  SSSLVASPSGEIALSSEEKVYNVVLKQAALVNKQLRSSSYDLDVKKPQDVVLPGSLS--- 129

Query: 98  NLLNEAYARCGEVCAEYAKTFYLGTQLMTPERRRAVWAIYVWCRRTDELVDGPNASHITP 157
            LL EAY RCGEVCAEYAKTFYLGT LMTPERR+A+WAIYVWCRRTDELVDGPNASHITP
Sbjct: 130 -LLGEAYDRCGEVCAEYAKTFYLGTLLMTPERRKAIWAIYVWCRRTDELVDGPNASHITP 189

Query: 158 KALARWETRLTDLFEGRPYDMYDAALSDTVSKYFVDIQCTSLFNVIKSPFKDMIEGMRVD 217
            AL RWE RL DLF GRP+DM DAAL+DTV++Y VDIQ          PF+DMIEGMR+D
Sbjct: 190 MALDRWEARLEDLFRGRPFDMLDAALADTVARYPVDIQ----------PFRDMIEGMRMD 249

Query: 218 LRKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAPESKASVESVYNAALALGLANQLTNI 277
           L+KSRY+NFD+LYLYCYYVAGTVGLMSVPVMG+ P+SKA+ ESVYNAALALG+ANQLTNI
Sbjct: 250 LKKSRYQNFDDLYLYCYYVAGTVGLMSVPVMGIDPKSKATTESVYNAALALGIANQLTNI 309

Query: 278 LRDVGEDARRGRVYLPQDELAQAGLCDDDIFEGKVTEKWRSFMKGQIKRARRFFDEAEKG 337
           LRDVGEDARRGRVYLPQDELAQAGL D+DIF GKVT+KWR+FMK Q+KRAR FFDEAEKG
Sbjct: 310 LRDVGEDARRGRVYLPQDELAQAGLSDEDIFAGKVTDKWRNFMKMQLKRARMFFDEAEKG 369

Query: 338 IAELSAASRWPVWASLMLYKQILDSIEANDYDNFTKRAYVSKAKKLLSLPIAFGRAMMSP 397
           + ELSAASRWPVWASL+LY++ILD IEANDY+NFTKRAYV K KK+ +LP+A+ ++++  
Sbjct: 370 VTELSAASRWPVWASLLLYRRILDEIEANDYNNFTKRAYVGKVKKIAALPLAYAKSVLKT 420

[Close]

BLAST of CmoCh16G005120 vs. TAIR 10
Match: AT5G17230.2 (PHYTOENE SYNTHASE )

HSP 1 Score: 523.5 bits (1347), Expect = 1.5e-148
Identity = 261/365 (71.51%), Postives = 306/365 (83.84%), Query Frame = 0


Query: 38  SSAVVANPS----RSAEERVYEVVLKQAALVREPRKDRERGLDWEK--TIQNEGSISDDG 97
           SS++VA+PS     S+EE+VY VVLKQAALV +  +     LD +K   +   GS+S   
Sbjct: 70  SSSLVASPSGEIALSSEEKVYNVVLKQAALVNKQLRSSSYDLDVKKPQDVVLPGSLS--- 129

Query: 98  NLLNEAYARCGEVCAEYAKTFYLGTQLMTPERRRAVWAIYVWCRRTDELVDGPNASHITP 157
            LL EAY RCGEVCAEYAKTFYLGT LMTPERR+A+WAIYVWCRRTDELVDGPNASHITP
Sbjct: 130 -LLGEAYDRCGEVCAEYAKTFYLGTLLMTPERRKAIWAIYVWCRRTDELVDGPNASHITP 189

Query: 158 KALARWETRLTDLFEGRPYDMYDAALSDTVSKYFVDIQCTSLFNVIKSPFKDMIEGMRVD 217
            AL RWE RL DLF GRP+DM DAAL+DTV++Y VDIQ          PF+DMIEGMR+D
Sbjct: 190 MALDRWEARLEDLFRGRPFDMLDAALADTVARYPVDIQ----------PFRDMIEGMRMD 249

Query: 218 LRKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAPESKASVESVYNAALALGLANQLTNI 277
           L+KSRY+NFD+LYLYCYYVAGTVGLMSVPVMG+ P+SKA+ ESVYNAALALG+ANQLTNI
Sbjct: 250 LKKSRYQNFDDLYLYCYYVAGTVGLMSVPVMGIDPKSKATTESVYNAALALGIANQLTNI 309

Query: 278 LRDVGEDARRGRVYLPQDELAQAGLCDDDIFEGKVTEKWRSFMKGQIKRARRFFDEAEKG 337
           LRDVGEDARRGRVYLPQDELAQAGL D+DIF GKVT+KWR+FMK Q+KRAR FFDEAEKG
Sbjct: 310 LRDVGEDARRGRVYLPQDELAQAGLSDEDIFAGKVTDKWRNFMKMQLKRARMFFDEAEKG 369

Query: 338 IAELSAASRWPVWASLMLYKQILDSIEANDYDNFTKRAYVSKAKKLLSLPIAFGRAMMSP 397
           + ELSAASRWPVWASL+LY++ILD IEANDY+NFTKRAYV K KK+ +LP+A+ ++++  
Sbjct: 370 VTELSAASRWPVWASLLLYRRILDEIEANDYNNFTKRAYVGKVKKIAALPLAYAKSVLKT 420

[Close]

BLAST of CmoCh16G005120 vs. TAIR 10
Match: AT5G17230.3 (PHYTOENE SYNTHASE )

HSP 1 Score: 513.5 bits (1321), Expect = 1.6e-145
Identity = 261/380 (68.68%), Postives = 306/380 (80.53%), Query Frame = 0


Query: 38  SSAVVANPS----RSAEERVYEVVLKQAALVREPRKDRERGLDWEK--TIQNEGSISDDG 97
           SS++VA+PS     S+EE+VY VVLKQAALV +  +     LD +K   +   GS+S   
Sbjct: 70  SSSLVASPSGEIALSSEEKVYNVVLKQAALVNKQLRSSSYDLDVKKPQDVVLPGSLS--- 129

Query: 98  NLLNEAYARCGEVCAEYAKTFYLGTQLMTPERRRAVWAIY---------------VWCRR 157
            LL EAY RCGEVCAEYAKTFYLGT LMTPERR+A+WAIY               VWCRR
Sbjct: 130 -LLGEAYDRCGEVCAEYAKTFYLGTLLMTPERRKAIWAIYVMLKVDFYKQSIVALVWCRR 189

Query: 158 TDELVDGPNASHITPKALARWETRLTDLFEGRPYDMYDAALSDTVSKYFVDIQCTSLFNV 217
           TDELVDGPNASHITP AL RWE RL DLF GRP+DM DAAL+DTV++Y VDIQ       
Sbjct: 190 TDELVDGPNASHITPMALDRWEARLEDLFRGRPFDMLDAALADTVARYPVDIQ------- 249

Query: 218 IKSPFKDMIEGMRVDLRKSRYENFDELYLYCYYVAGTVGLMSVPVMGLAPESKASVESVY 277
              PF+DMIEGMR+DL+KSRY+NFD+LYLYCYYVAGTVGLMSVPVMG+ P+SKA+ ESVY
Sbjct: 250 ---PFRDMIEGMRMDLKKSRYQNFDDLYLYCYYVAGTVGLMSVPVMGIDPKSKATTESVY 309

Query: 278 NAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFEGKVTEKWRSFMKG 337
           NAALALG+ANQLTNILRDVGEDARRGRVYLPQDELAQAGL D+DIF GKVT+KWR+FMK 
Sbjct: 310 NAALALGIANQLTNILRDVGEDARRGRVYLPQDELAQAGLSDEDIFAGKVTDKWRNFMKM 369

Query: 338 QIKRARRFFDEAEKGIAELSAASRWPVWASLMLYKQILDSIEANDYDNFTKRAYVSKAKK 397
           Q+KRAR FFDEAEKG+ ELSAASRWPVWASL+LY++ILD IEANDY+NFTKRAYV K KK
Sbjct: 370 QLKRARMFFDEAEKGVTELSAASRWPVWASLLLYRRILDEIEANDYNNFTKRAYVGKVKK 429

The following BLAST results are available for this feature:

BLAST of CmoCh16G005120 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SSU8	3.3e-156	76.37	Phytoene synthase, chloroplastic OS=Daucus carota OX=4039 GN=PSY PE=2 SV=1	[more]
P49293	1.5e-148	74.17	Phytoene synthase, chloroplastic OS=Cucumis melo OX=3656 GN=PSY PE=2 SV=1	[more]
P53797	1.6e-147	71.99	Phytoene synthase, chloroplastic OS=Narcissus pseudonarcissus OX=39639 GN=PSY PE...	[more]
P37271	2.1e-147	71.51	Phytoene synthase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSY1 PE=1 SV...	[more]
Q2QLV9	6.8e-146	75.14	Phytoene synthase 2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=P...	[more]

BLAST of CmoCh16G005120 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ETX4	2.1e-222	97.48	phytoene synthase 2, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662...	[more]
A0A6J1JCY2	1.5e-220	96.22	phytoene synthase 2, chloroplastic-like isoform X1 OS=Cucurbita maxima OX=3661 G...	[more]
A0A6J1ETY1	2.2e-208	93.20	phytoene synthase 2, chloroplastic-like isoform X2 OS=Cucurbita moschata OX=3662...	[more]
A0A6J1JAZ9	1.6e-206	91.94	phytoene synthase 2, chloroplastic-like isoform X2 OS=Cucurbita maxima OX=3661 G...	[more]
A0A0A0KVC2	9.8e-196	88.35	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G063980 PE=3 SV=1	[more]

BLAST of CmoCh16G005120 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G17230.1	1.5e-148	71.51	PHYTOENE SYNTHASE	[more]
AT5G17230.2	1.5e-148	71.51	PHYTOENE SYNTHASE	[more]
AT5G17230.3	1.6e-145	68.68	PHYTOENE SYNTHASE	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008949	Isoprenoid synthase domain superfamily	GENE3D	1.10.600.10	Farnesyl Diphosphate Synthase	coord: 88..381 e-value: 2.8E-88 score: 297.8
IPR008949	Isoprenoid synthase domain superfamily	SUPERFAMILY	48576	Terpenoid synthases	coord: 97..388
IPR002060	Squalene/phytoene synthase	PFAM	PF00494	SQS_PSY	coord: 108..373 e-value: 1.6E-68 score: 231.1
IPR002060	Squalene/phytoene synthase	SFLD	SFLDG01018	Squalene/Phytoene_Synthase_Li	coord: 95..386 e-value: 0.0 score: 306.6
IPR044843	Trans-isoprenyl diphosphate synthases, bacterial-type	SFLD	SFLDG01212	Phytoene_synthase_like	coord: 95..386 e-value: 0.0 score: 306.6
IPR044843	Trans-isoprenyl diphosphate synthases, bacterial-type	PANTHER	PTHR31480	BIFUNCTIONAL LYCOPENE CYCLASE/PHYTOENE SYNTHASE	coord: 43..394
None	No IPR available	PANTHER	PTHR31480:SF2	PHYTOENE SYNTHASE, CHLOROPLASTIC	coord: 43..394
IPR019845	Squalene/phytoene synthase, conserved site	PROSITE	PS01045	SQUALEN_PHYTOEN_SYN_2	coord: 262..287
IPR019845	Squalene/phytoene synthase, conserved site	PROSITE	PS01044	SQUALEN_PHYTOEN_SYN_1	coord: 226..241
IPR033904	Trans-isoprenyl diphosphate synthases, head-to-head	CDD	cd00683	Trans_IPPS_HH	coord: 99..376 e-value: 2.49292E-108 score: 317.255

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh16G005120.1	CmoCh16G005120.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016120	carotene biosynthetic process
biological_process	GO:0016117	carotenoid biosynthetic process
biological_process	GO:0009058	biosynthetic process
cellular_component	GO:0010287	plastoglobule
molecular_function	GO:0046905	15-cis-phytoene synthase activity
molecular_function	GO:0004311	farnesyltranstransferase activity
molecular_function	GO:0016767	geranylgeranyl-diphosphate geranylgeranyltransferase activity
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups