CmoCh16G005080 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGATTGTGTTGTTTGAACGTTCAAAATAGGCGTACGCGGAGAAGAAGGGAAGAACCCACTTCCCAAAGCTAAATTTGCTATATAGAAAAGTCCACATACCCTCTCAACGCCGTCTCTCCTCGATTGCTTCTTTTGTGTTGGCATAGCTACGAGTTTGTTACTCTCTCTACTCCGCCGACCTTCTAAGGTCAGTTTGGCTTCTGGGTCTCTTTTGATTTCTTGTTTTGATCCTGTTTTGTGATCTGGGTCGATCGTTGATTTCTCAGTTTGGATGTTTTCTTCCTCTCGTTCTTCATTGTCTTTTGTTGTTTTTGGAATTTGAATCGAACTAGAGGAATTGGATTAGCTGTCTGATTGTTTATTTGCTTGTTTGTAAGGATCTCGTCGCTTGATCATTCTGTTTTTTTGGGTTTGTGGAGTTTTCTTTGTTAAATGACGATGAACTTGAAGTTGGACGTGAATTTTGGGTTCAGAAACCCAGAAGACCACAATGGTATGATATTGTCCAGAGCTTATGCTTTGGGCTTCCGGAGATGTTTTCCTTACTTATTAACCCGTGATCATTCTCTAAATTAGCCAACGTGGGACTCCCTCTCGACAATCCTCAATCCTCAATCTCTGGAGGGTCGTTAATGCTCACCATTGTCTTTTCATACCATTATATCCAATTCCACTATCTTAAGATCTAGAAAGTCATCTAGCCAATTCCACTTGAAAGGATTATGCTGATGAAGGGACGTGGATTGCTTGTTGTTGAGCAGTGGCGAGTAACATCTGTTTCTCTGTTATATTTGAGCAATAATCTTTGCTTATCTCTATCAATATTGAATTGTTGTTCGAATTCTATGGGGTATGGAGCTTGTCATGATGCAAACCTGCTGCATTGCTAATTGCATAATGGCTGCCATTTGTGTGTGTGTGTGCACTGTTCTACTCATGTCTAATTCTGAACTGACTTGTTTTGTTGACAGGTTTCGGTATTGAACGTGGTCATCATAGGACGATTTGAAGGAGCGGAGAACGGCTGCTGCTGCTGCTGCTGCTGCTGCTTTATCATATAGATATGACTTGCTTCCCTTTTTTGTTCAGTAAGAGGGTAAAGTCCCCAACAAAAAGTTTTGGTGATGAAGAACAAGGTATATTAATCACATGGGCATACATAGCCTCATCTTTTGATGGACATATTTGAAGAGTTTCTTGTGTTGAAAGATGTGAGGAAGTTCTAACATTATTTTTCTATGGAATAGAACTGTCGGGCATCCAAAATGTTAGATTTTACACTTACAAAGAGCTGAAAGTTGCGACCGACGATTTCAGCTTGACGAATAAAATAGGGGAGGGTGGTTTTGGCTCCGTCTACAAGGTAGTTGAATGTCTTCTTTAACGTGAACTATAGATAGTCGTTGTGTTTTTGTGAGATCCCACGTTGGTTGGAGAGGAGCACGAAGTATTTTTTATAAAGGTGTGGAAACCTCTCCCTAACTGATGCGTTTTAAAAGCCTCGAGGGAAAGCCTAAAAGGGAATGCCCAAAGAGGATATTATCTGCTAGTGGTGAGCTTAGGCTCTTGCAAATGGTATAAGAGCTAGACATTGGGCAGTGTGTCAGTGAGGACACTGGCCCCCAAAGGGGGTGGATTGTGAGATTCCACATTGGTTAGAGAGGAGAATGAATCATTTTTTCCTTATAAAGATGTGGAAACCTCTCCCTAGCTGATGCATTTTAAAAATCTTGAGGGGAAGCCTAAAAGGGAAAGCCCAAAGAGGACAGTATCGGCTAGCGGTGGCTTAGGCGGTTACAAATGGTATTAGAGTCAGACACCAGGCAGTATCTCAGCGAGGACGCTGGGCTCTGAAGGGGGGTGGATTTTGAGATCCTACATTGGTTGGAGAGGAGAACAAAACATTCTTTATAAGGGTGTTGGAACCTCTCTCTAGCAGACGCGTTTTAAAAACCTTGAGGGGAACCCCGAAAGGGAAAGTGCAAAGAGGACATTATTTGATAGCGGTGGGCTTAGACTGTTACAGCTTTAGGTCTAATGTTTCTAAGTTGTATCGTTCCATTCATTCATCATGAATATAACCTTGGCAATTACTATCTATGATCAGGGAAAGCTAAAAGATGGAAAGATTGCTGCCATAAAAGTTCTTTCAGCTGAATCAAAACAAGGATTGAAGGAATTCTTGACAGAAATCAATGTCATCTCTGTGATAGAACATGAAAATCTGGTTCAGCTTTATGGCTGCTGTGTGGATGATAATCATAGAATCCTTGTCTACAACTACCTCGAGAATAATAGCCTTGCACAAACTCTTCTCGGTACGAACTGAATCGGGTTCTCGATTATATTTCCTTTTGTACAATGTTTTCCTTTTCAAATTCTCTCCCCCTTTTCAGGATTGTACTGTTAAATTGCAGTTCAATGCTCAAGATATTGTTTGTTTTTCAGGGCGAGGTCACAGTAGCATCCAGTTTAATTGGCGAACGAGGTCCAAGATTTGCATTGGAATTGCACGTGGGCTCGCGTTCCTTCACGAGGACGTACAGCCACATATCATTCATAGAGATATCAAAGCCAGCAACATTCTTCTCGACCGCGACCTCACTCCTAAAATTTCAGATTTCGGCCTCGCAAAGCTTATTCCAGCCAGCATGACTCATGTCAGTACACGAGTGGCAGGAACAATGTAAGCCACTCCATTTCTGATTGAACTTCTTGGGATTCTGGTTGCTTGTGTGTGAAATTGTGGCTCTGACACTAATATCACAGTGTAGACAGTTTGTTCGTTCGGTTGTCTCGTGTAGCTGAATGTTTTCGTGTTAAAATCATATGTTTTCCAACATTGTTCAACTAATTTTAGCTCGATTTCTTAGCATGTTCTGATATCTTGCATTTGTTAAGATAGTACAACCATGAAAGTTTAAGCACCAAAGTCTGAAGACATAGGAACACAGTAACGAAGCCAACCGCTAGCAAATGTTATCATTTTTGAGTTTTTCTTTTGGGCTTCCCTTCAAGGTTTTTAAAACGCGTCTGCTAGGGAGAGGTTTCCATACCCTTATAAGGAATGTTTCGTTCTCCTCTCCAACCAACGTGGGATCTCACAATCTAGCCCCCTTGAGGGCCAGCGTCCTCGCTAGCACACCGCCCAGTATCTGGCTTTGATACCATTTGTATGTTGTCCTCTTTGGGCTTTCCCTTTCGGGCTTCCCTTCAAGGTTTTTAAAACGCGTCATATAGGGAGAGGTTTCCACACCTTTATAAAGAATGTCTTCCCTCTCTAACCGACGTGGGGTCTCACAGTTTCCCACCTAAGAACATTCTTTTATCCTTTTGGTCTCTCTCTTTTTGCTCGTTTGTCTTTGTCGAGGTAATTCTCCTTTTAATTTTGTTTACATTCTTGTTTGTTAGTGGTTACCTAGCTCCAGAATATGCCATCAGAGGACAGGTGACAAGAAAATCGGATCTTTACAGTTTCGGCGTCCTCCTCGTGGAAATCGTCAGCGGGAGATGCAACACGAATACACAACTACCAATGGGAGAACAATATCTTCTTGAAAGGGTACGCACAGCTTTCACCAGTCCTCCCATAAGTAATGAATTATGATCATGTTGTTTCAGTTTAGATCTTAGAACTCATTGTACTAATGTGTTGAATCTATGTTTGAATGTTTCAGACATGGCATCATTACGAGCAAGGAGAGCTCGTTCTACTTGTAGATGTGTCCTTAAATGGCGACTTCGATGCCGAGGAGGCTTGTAGATATCTAAAGATTGGTCTACTTTGCACTCAAGACAGTCCAAAGCTCCGTCCATCGATGTCGACCGTGGTAAAGATGCTAACGGGCGAGATGAGTATCAAAGATAGAAAGATAACGAAACCGGGGCTGATTTTGGACTTCATGGATCTAAAAGTAAGGGATCAACAGCAAAAGAAGGGGAATAAAGAAAGATTGTCTTCTGATAGTCTGTCTTCTGGATCGTCAACTGTTACAACTGCAACCTTCAGTGCACAATATGACAGGAACACCTTCTCATCTGTCATGTGAAAGTGACTAAGATCATTTCATTCATTCTCTTCAGCAATAGGGTTTTGGGGAAAATGTGTGTAAATTGTTGAATATGTTCTTTGTTTTTTTTGGGTAAGGAAGAGTTCTTGGAAGGCTTTGTAATATATTGTAGAAATTGATGTGTTTCATTGCA ATGGAGATTGTGTTTAAGAGGGTAAAGTCCCCAACAAAAAGTTTTGGTGATGAAGAACAAGAACTGTCGGGCATCCAAAATGTTAGATTTTACACTTACAAAGAGCTGAAAGTTGCGACCGACGATTTCAGCTTGACGAATAAAATAGGGGAGGGTGATGGAAAGATTGCTGCCATAAAAGTTCTTTCAGCTGAATCAAAACAAGGATTGAAGGAATTCTTGACAGAAATCAATGTCATCTCTGTGATAGAACATGAAAATCTGGTTCAGCTTTATGGCTGCTGTGTGGATGATAATCATAGAATCCTTGTCTACAACTACCTCGAGAATAATAGCCTTGCACAAACTCTTCTCGGGCGAGGTCACAGTAGCATCCAGTTTAATTGGCGAACGAGGTCCAAGATTTGCATTGGAATTGCACGTGGGCTCGCGTTCCTTCACGAGGACGTACAGCCACATATCATTCATAGAGATATCAAAGCCAGCAACATTCTTCTCGACCGCGACCTCACTCCTAAAATTTCAGATTTCGGCCTCGCAAAGCTTATTCCAGCCAGCATGACTCATGTCAGTACACGAGTGGCAGGAACAATTGGTTACCTAGCTCCAGAATATGCCATCAGAGGACAGGTGACAAGAAAATCGGATCTTTACAGTTTCGGCGTCCTCCTCGTGGAAATCGTCAGCGGGAGATGCAACACGAATACACAACTACCAATGGGAGAACAATATCTTCTTGAAAGGACATGGCATCATTACGAGCAAGGAGAGCTCGTTCTACTTGTAGATGTGTCCTTAAATGGCGACTTCGATGCCGAGGAGGCTTGTAGATATCTAAAGATTGGTCTACTTTGCACTCAAGACAGTCCAAAGCTCCGTCCATCGATGTCGACCGTGGTAAAGATGCTAACGGGCGAGATGAGTATCAAAGATAGAAAGATAACGAAACCGGGGCTGATTTTGGACTTCATGGATCTAAAAGTAAGGGATCAACAGCAAAAGAAGGGGAATAAAGAAAGATTGTCTTCTGATAGTCTGTCTTCTGGATCGTCAACTGTTACAACTGCAACCTTCAGTGCACAATATGACAGGAACACCTTCTCATCTGTCATGTGAAAGTGACTAAGATCATTTCATTCATTCTCTTCAGCAATAGGGTTTTGGGGAAAATGTGTGTAAATTGTTGAATATGTTCTTTGTTTTTTTTGGGTAAGGAAGAGTTCTTGGAAGGCTTTGTAATATATTGTAGAAATTGATGTGTTTCATTGCA ATGGAGATTGTGTTTAAGAGGGTAAAGTCCCCAACAAAAAGTTTTGGTGATGAAGAACAAGAACTGTCGGGCATCCAAAATGTTAGATTTTACACTTACAAAGAGCTGAAAGTTGCGACCGACGATTTCAGCTTGACGAATAAAATAGGGGAGGGTGATGGAAAGATTGCTGCCATAAAAGTTCTTTCAGCTGAATCAAAACAAGGATTGAAGGAATTCTTGACAGAAATCAATGTCATCTCTGTGATAGAACATGAAAATCTGGTTCAGCTTTATGGCTGCTGTGTGGATGATAATCATAGAATCCTTGTCTACAACTACCTCGAGAATAATAGCCTTGCACAAACTCTTCTCGGGCGAGGTCACAGTAGCATCCAGTTTAATTGGCGAACGAGGTCCAAGATTTGCATTGGAATTGCACGTGGGCTCGCGTTCCTTCACGAGGACGTACAGCCACATATCATTCATAGAGATATCAAAGCCAGCAACATTCTTCTCGACCGCGACCTCACTCCTAAAATTTCAGATTTCGGCCTCGCAAAGCTTATTCCAGCCAGCATGACTCATGTCAGTACACGAGTGGCAGGAACAATTGGTTACCTAGCTCCAGAATATGCCATCAGAGGACAGGTGACAAGAAAATCGGATCTTTACAGTTTCGGCGTCCTCCTCGTGGAAATCGTCAGCGGGAGATGCAACACGAATACACAACTACCAATGGGAGAACAATATCTTCTTGAAAGGACATGGCATCATTACGAGCAAGGAGAGCTCGTTCTACTTGTAGATGTGTCCTTAAATGGCGACTTCGATGCCGAGGAGGCTTGTAGATATCTAAAGATTGGTCTACTTTGCACTCAAGACAGTCCAAAGCTCCGTCCATCGATGTCGACCGTGGTAAAGATGCTAACGGGCGAGATGAGTATCAAAGATAGAAAGATAACGAAACCGGGGCTGATTTTGGACTTCATGGATCTAAAAGTAAGGGATCAACAGCAAAAGAAGGGGAATAAAGAAAGATTGTCTTCTGATAGTCTGTCTTCTGGATCGTCAACTGTTACAACTGCAACCTTCAGTGCACAATATGACAGGAACACCTTCTCATCTGTCATGTGA MEIVFKRVKSPTKSFGDEEQELSGIQNVRFYTYKELKVATDDFSLTNKIGEGDGKIAAIKVLSAESKQGLKEFLTEINVISVIEHENLVQLYGCCVDDNHRILVYNYLENNSLAQTLLGRGHSSIQFNWRTRSKICIGIARGLAFLHEDVQPHIIHRDIKASNILLDRDLTPKISDFGLAKLIPASMTHVSTRVAGTIGYLAPEYAIRGQVTRKSDLYSFGVLLVEIVSGRCNTNTQLPMGEQYLLERTWHHYEQGELVLLVDVSLNGDFDAEEACRYLKIGLLCTQDSPKLRPSMSTVVKMLTGEMSIKDRKITKPGLILDFMDLKVRDQQQKKGNKERLSSDSLSSGSSTVTTATFSAQYDRNTFSSVM Homology
BLAST of CmoCh16G005080 vs. ExPASy Swiss-Prot
Match: Q93YN1 (Cold-responsive protein kinase 1 OS=Arabidopsis thaliana OX=3702 GN=CRPK1 PE=1 SV=1) HSP 1 Score: 470.3 bits (1209), Expect = 2.0e-131 Identity = 245/372 (65.86%), Postives = 297/372 (79.84%), Query Frame = 0
BLAST of CmoCh16G005080 vs. ExPASy Swiss-Prot
Match: C0LGH3 (Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana OX=3702 GN=At1g56140 PE=2 SV=2) HSP 1 Score: 315.8 bits (808), Expect = 6.3e-85 Identity = 163/332 (49.10%), Postives = 222/332 (66.87%), Query Frame = 0
BLAST of CmoCh16G005080 vs. ExPASy Swiss-Prot
Match: C0LGH2 (Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana OX=3702 GN=At1g56130 PE=2 SV=2) HSP 1 Score: 313.2 bits (801), Expect = 4.1e-84 Identity = 163/332 (49.10%), Postives = 220/332 (66.27%), Query Frame = 0
BLAST of CmoCh16G005080 vs. ExPASy Swiss-Prot
Match: C0LGG8 (Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana OX=3702 GN=At1g53430 PE=1 SV=1) HSP 1 Score: 312.0 bits (798), Expect = 9.1e-84 Identity = 161/306 (52.61%), Postives = 211/306 (68.95%), Query Frame = 0
BLAST of CmoCh16G005080 vs. ExPASy Swiss-Prot
Match: C0LGG9 (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana OX=3702 GN=At1g53440 PE=2 SV=2) HSP 1 Score: 311.6 bits (797), Expect = 1.2e-83 Identity = 160/306 (52.29%), Postives = 211/306 (68.95%), Query Frame = 0
BLAST of CmoCh16G005080 vs. ExPASy TrEMBL
Match: A0A6J1EYY9 (cold-responsive protein kinase 1 OS=Cucurbita moschata OX=3662 GN=LOC111437686 PE=3 SV=1) HSP 1 Score: 714.5 bits (1843), Expect = 2.2e-202 Identity = 366/377 (97.08%), Postives = 366/377 (97.08%), Query Frame = 0
BLAST of CmoCh16G005080 vs. ExPASy TrEMBL
Match: A0A6J1J7T0 (cold-responsive protein kinase 1 OS=Cucurbita maxima OX=3661 GN=LOC111483356 PE=3 SV=1) HSP 1 Score: 677.2 bits (1746), Expect = 4.0e-191 Identity = 347/377 (92.04%), Postives = 356/377 (94.43%), Query Frame = 0
BLAST of CmoCh16G005080 vs. ExPASy TrEMBL
Match: A0A1S3BRT6 (putative serine/threonine-protein kinase OS=Cucumis melo OX=3656 GN=LOC103492993 PE=3 SV=1) HSP 1 Score: 620.5 bits (1599), Expect = 4.4e-174 Identity = 325/390 (83.33%), Postives = 347/390 (88.97%), Query Frame = 0
BLAST of CmoCh16G005080 vs. ExPASy TrEMBL
Match: A0A5A7V6V0 (Putative serine/threonine-protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G00480 PE=3 SV=1) HSP 1 Score: 620.5 bits (1599), Expect = 4.4e-174 Identity = 325/390 (83.33%), Postives = 347/390 (88.97%), Query Frame = 0
BLAST of CmoCh16G005080 vs. ExPASy TrEMBL
Match: A0A5D3CYN2 (Putative serine/threonine-protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G001820 PE=3 SV=1) HSP 1 Score: 620.5 bits (1599), Expect = 4.4e-174 Identity = 325/390 (83.33%), Postives = 347/390 (88.97%), Query Frame = 0
BLAST of CmoCh16G005080 vs. TAIR 10
Match: AT1G16670.1 (Protein kinase superfamily protein ) HSP 1 Score: 470.3 bits (1209), Expect = 1.4e-132 Identity = 245/372 (65.86%), Postives = 297/372 (79.84%), Query Frame = 0
BLAST of CmoCh16G005080 vs. TAIR 10
Match: AT3G09010.1 (Protein kinase superfamily protein ) HSP 1 Score: 323.6 bits (828), Expect = 2.1e-88 Identity = 165/318 (51.89%), Postives = 223/318 (70.13%), Query Frame = 0
BLAST of CmoCh16G005080 vs. TAIR 10
Match: AT1G56120.1 (Leucine-rich repeat transmembrane protein kinase ) HSP 1 Score: 316.2 bits (809), Expect = 3.4e-86 Identity = 165/331 (49.85%), Postives = 221/331 (66.77%), Query Frame = 0
BLAST of CmoCh16G005080 vs. TAIR 10
Match: AT1G56140.1 (Leucine-rich repeat transmembrane protein kinase ) HSP 1 Score: 315.8 bits (808), Expect = 4.5e-86 Identity = 163/332 (49.10%), Postives = 222/332 (66.87%), Query Frame = 0
BLAST of CmoCh16G005080 vs. TAIR 10
Match: AT1G56130.1 (Leucine-rich repeat transmembrane protein kinase ) HSP 1 Score: 313.2 bits (801), Expect = 2.9e-85 Identity = 163/332 (49.10%), Postives = 220/332 (66.27%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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