CmoCh16G004910 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGCTTATTCGACTCGGGTTGTGATCATCGACACCAAGTATGTGCAAACGGATGCCAAGAGCTTCAAGACGGTGGTGCAGAAGCTGACGGGGAAGGACCCGGTGGCGGAGGAGAATCGACATGGTGACGGTGCCCGGAACTCGAGTTTTTTGAGAGATTCGTCGTTCAAGGAGTTCCAAAGAGTGCTGCGAGAGATGCCAAGAGTTGGTGAATGA ATGGCAGCTTATTCGACTCGGGTTGTGATCATCGACACCAAGTATGTGCAAACGGATGCCAAGAGCTTCAAGACGGTGGTGCAGAAGCTGACGGGGAAGGACCCGGTGGCGGAGGAGAATCGACATGGTGACGGTGCCCGGAACTCGAGTTTTTTGAGAGATTCGTCGTTCAAGGAGTTCCAAAGAGTGCTGCGAGAGATGCCAAGAGTTGGTGAATGA ATGGCAGCTTATTCGACTCGGGTTGTGATCATCGACACCAAGTATGTGCAAACGGATGCCAAGAGCTTCAAGACGGTGGTGCAGAAGCTGACGGGGAAGGACCCGGTGGCGGAGGAGAATCGACATGGTGACGGTGCCCGGAACTCGAGTTTTTTGAGAGATTCGTCGTTCAAGGAGTTCCAAAGAGTGCTGCGAGAGATGCCAAGAGTTGGTGAATGA MAAYSTRVVIIDTKYVQTDAKSFKTVVQKLTGKDPVAEENRHGDGARNSSFLRDSSFKEFQRVLREMPRVGE Homology
BLAST of CmoCh16G004910 vs. ExPASy Swiss-Prot
Match: Q1G3U8 (VQ motif-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=VQ1 PE=1 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 6.6e-07 Identity = 36/80 (45.00%), Postives = 46/80 (57.50%), Query Frame = 0
BLAST of CmoCh16G004910 vs. ExPASy Swiss-Prot
Match: Q8VYI5 (VQ motif-containing protein 10 OS=Arabidopsis thaliana OX=3702 GN=VQ10 PE=1 SV=1) HSP 1 Score: 47.0 bits (110), Expect = 1.1e-04 Identity = 33/91 (36.26%), Postives = 46/91 (50.55%), Query Frame = 0
BLAST of CmoCh16G004910 vs. ExPASy TrEMBL
Match: A0A0A0KXJ0 (VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G075740 PE=4 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 5.4e-20 Identity = 61/75 (81.33%), Postives = 63/75 (84.00%), Query Frame = 0
BLAST of CmoCh16G004910 vs. ExPASy TrEMBL
Match: A0A5A7VBD1 (VQ motif-containing protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G001280 PE=4 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 2.7e-19 Identity = 58/75 (77.33%), Postives = 60/75 (80.00%), Query Frame = 0
BLAST of CmoCh16G004910 vs. ExPASy TrEMBL
Match: A0A6J1CNV7 (VQ motif-containing protein 10-like OS=Momordica charantia OX=3673 GN=LOC111012826 PE=4 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 4.8e-16 Identity = 54/71 (76.06%), Postives = 58/71 (81.69%), Query Frame = 0
BLAST of CmoCh16G004910 vs. ExPASy TrEMBL
Match: A0A6J1FVF7 (VQ motif-containing protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111447218 PE=4 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 1.4e-15 Identity = 49/69 (71.01%), Postives = 54/69 (78.26%), Query Frame = 0
BLAST of CmoCh16G004910 vs. ExPASy TrEMBL
Match: A0A0L9UJH2 (VQ domain-containing protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan05g031100 PE=4 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 5.4e-12 Identity = 44/72 (61.11%), Postives = 53/72 (73.61%), Query Frame = 0
BLAST of CmoCh16G004910 vs. TAIR 10
Match: AT1G17147.1 (VQ motif-containing protein ) HSP 1 Score: 54.3 bits (129), Expect = 4.7e-08 Identity = 36/80 (45.00%), Postives = 46/80 (57.50%), Query Frame = 0
BLAST of CmoCh16G004910 vs. TAIR 10
Match: AT1G78410.1 (VQ motif-containing protein ) HSP 1 Score: 47.0 bits (110), Expect = 7.5e-06 Identity = 33/91 (36.26%), Postives = 46/91 (50.55%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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