Homology
BLAST of CmoCh16G004250 vs. ExPASy Swiss-Prot
Match:
F4I9Q5 (DExH-box ATP-dependent RNA helicase DExH7, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g58060 PE=2 SV=1)
HSP 1 Score: 1697.6 bits (4395), Expect = 0.0e+00
Identity = 916/1490 (61.48%), Postives = 1139/1490 (76.44%), Query Frame = 0
Query: 1 MAPRKKQQQQPKQKQNNRKSNPTSSTSDSRSSTSGAKLHISAENETRLRRLLLSSGRSTP 60
MAP+KK P+++ N S+ +SS S+ + +SG KL ISAENE RLRRLLL+SGRS P
Sbjct: 1 MAPKKK----PQKQSNKAASSSSSSKSNYQKPSSGPKLQISAENEDRLRRLLLNSGRSGP 60
Query: 61 SV-THADDSLSKVQKVKKLQSVYEKLSCEGFTNDQIELALSTIGDSATFEAALDWLCLNL 120
S+ +SLSK QK KKL +VYEKLSCEGF +DQIELALS++ D ATFEAALDWLCLNL
Sbjct: 61 SIPAPISNSLSKAQKTKKLNNVYEKLSCEGFVDDQIELALSSLRDGATFEAALDWLCLNL 120
Query: 121 PSSELPLKFSSGTSLHAHAGGSVRILQTAQKDCPPVGVQSSKYKDGDKDIPV-ILNRRKD 180
PS ELP+KFS+G S GGSV ++ T++ D S + ++ + + V + ++ +
Sbjct: 121 PSHELPVKFSTGASRFPSTGGSVGVISTSRDDWNDSTDSSVRVEEEEPAVFVRVKGKQDE 180
Query: 181 DDKLDLFQSSQAEWIKQYVEQQEEDDYGTWEDDL-ADEVSSKASRARSYDVIAEEYYAAR 240
+D L +SSQA+WI+QY+ +QEE++ WED++ + +K S R +DVIA+EYY+AR
Sbjct: 181 EDTLSSDKSSQADWIRQYMMRQEEEELECWEDEVDGIDPRNKVSGPRPFDVIAKEYYSAR 240
Query: 241 LEAAKAKEEGDKKRQETAGNTIRKLKQELFAQGLSDDMLASEFEFGRALDNASKDAPTQD 300
+A KAKE+ DK+ QE AG IRKLKQE+ GLS+ ML SEF+ A ++A++
Sbjct: 241 SDAIKAKEKRDKRGQEQAGLAIRKLKQEISDLGLSEAMLESEFQREHAFESATEQE---- 300
Query: 301 QNFGVNQTDDVGSSLDLSVHRNESVDIDGRDRSTSKEISVDLMSSQEKESTVDVDGRDCS 360
S+ +S + +ESVD D ++SV ++ + T++ + +
Sbjct: 301 ------------STCPISDNLHESVDAD--------DVSVQMLDN----LTLNTNPAESY 360
Query: 361 TPKEISVGLI--SSQGKN---DCEELEDVEIGNFFVEDVETNSNVAQELLELKKREKLRE 420
+EI + SS G++ E+ EDVE+G+ F E++ + ELLEL+K EK+RE
Sbjct: 361 ESEEIQTKALPSSSSGQDFVASDEDSEDVELGDTFFEEIPPSEISPHELLELQKEEKMRE 420
Query: 421 LSSGKNLEKLDGIWKKGDPLKIPKAVLHQLCQKAGWDAPKFNKIHRKENVFFYAVNILRK 480
L S KNL KLDGIWKKG+ KIPKA LHQLCQ++GW+APKFNK + F Y V+ILRK
Sbjct: 421 LRSEKNLGKLDGIWKKGEAQKIPKAFLHQLCQRSGWEAPKFNKETGEGRNFSYTVSILRK 480
Query: 481 ASGRGKNRKAGGLITLQLPDADEIFDSAEDAQNKVAAFALYHLFPDVPVHLALIEPYATL 540
ASGRGKNR+AGGL+TLQLP DE F+S EDAQNKVAAFAL+ LF D+PVH A+ EPYA+L
Sbjct: 481 ASGRGKNRQAGGLVTLQLPPKDENFESIEDAQNKVAAFALHKLFSDLPVHFAITEPYASL 540
Query: 541 VMQWKAGE-STSKVDDNEKDRRASFVDSLL--DASSSDSASKTFVGKIEQLHIEDDKKPT 600
V+ WK E + + E+DRRA+FVD LL D+ S ++S +F + + K
Sbjct: 541 VLIWKQEELLCTTIQSTEEDRRANFVDKLLEEDSFSLTTSSSSFENSLPLVDSYVKDKDD 600
Query: 601 VSDLDSHSFVERLNSNTQNESSHLRLEHENKKKTKRYQDMLKNRAALPIASLRGDILRLL 660
+ + S++ +R +S + E L+ + ENKK+T++Y+DMLK R ALPI+ ++ IL+ L
Sbjct: 601 LGVVKSNNRAKR-DSYIEAECLSLQRKQENKKRTQKYKDMLKTRTALPISEVKNGILQHL 660
Query: 661 KENSVLVVCGDTGSGKTTQVPQFILDDMIESGHGGLCNIVCTQPRRIAAISVAERVSDER 720
KE VLVVCG+TGSGKTTQVPQFILDDMI+SGHGG CNI+CTQPRRIAAISVA+RV+DER
Sbjct: 661 KEKDVLVVCGETGSGKTTQVPQFILDDMIDSGHGGYCNIICTQPRRIAAISVAQRVADER 720
Query: 721 CEPSPGTNGSLVGYHVRLDSARNANTKLLFCTTGILLRQIVGDGNLTGITHIIVDEVHER 780
CE SPG + SLVGY VRL+SAR+ T+LLFCTTGILLR++ GD L +THIIVDEVHER
Sbjct: 721 CESSPGLDDSLVGYQVRLESARSDKTRLLFCTTGILLRKLAGDRTLNDVTHIIVDEVHER 780
Query: 781 SLLDDFLLVVLKNLVEKRSAESSS-PLKVILMSATVDSNLFSGYFGNCPVITAEGRMHPV 840
SLL DFLL++LK+L+EK+S +++S LKVILMSATVD++LFS YFG+CPVITA+GR HPV
Sbjct: 781 SLLGDFLLIILKSLIEKQSCDNTSRKLKVILMSATVDADLFSRYFGHCPVITAQGRTHPV 840
Query: 841 TTYFLEDIYESTGYLLASDSPAAIRYEVSSGKKNAPVNYRRGKKNLILSAWGDEALLSEA 900
TT+FLE+IYES YLLA DSPAA+R + S K VN RRGKKNL+L+ WGD+ LLSE
Sbjct: 841 TTHFLEEIYESINYLLAPDSPAALRSDTSIKDKLGSVNDRRGKKNLVLAGWGDDYLLSED 900
Query: 901 CTNPYYNLDCYQSYSELTQKNLERLNEDAIDYDLLEDLVIHVDKTFDEGAILVFLPGVSE 960
C NP+Y Y SYS+ TQ+NL+RLNED IDY+LLE+L+ H+D T +EGAIL+FLPGV+E
Sbjct: 901 CLNPFYVSSNYNSYSDQTQQNLKRLNEDRIDYELLEELICHIDDTCEEGAILIFLPGVAE 960
Query: 961 INLLYDRLAASYQFGGQASDWILPLHSSIASTDQKKVFLRPPHGIRKVIIATNIAETSIT 1020
I +L D LAASY+F G A+DW+LPLHSSIAS++Q+KVFLRPP G+RKVI ATNIAETSIT
Sbjct: 961 IYMLLDMLAASYRFRGPAADWLLPLHSSIASSEQRKVFLRPPKGLRKVIAATNIAETSIT 1020
Query: 1021 IDDVIYVIDCGRHKEKRYNPQKKLSSMVEDWISQANARQRRGRAGRVRPGNCFCLYTRHR 1080
IDDV+YVID G+HKE RYNPQKKLSSMVEDWISQANARQR GRAGRV+PG CF LYTR+R
Sbjct: 1021 IDDVVYVIDSGKHKENRYNPQKKLSSMVEDWISQANARQRTGRAGRVKPGICFSLYTRYR 1080
Query: 1081 YEKFMRPFQVPEMLRMPLVELCLQIKLLSLGYIRPFLSKALEPPREEAMTSAISLLYEVG 1140
+EK MRP+QVPEMLRMPLVELCLQIKLL LG+I+PFLS+ALEPP E AMTSAISLL+EVG
Sbjct: 1081 FEKLMRPYQVPEMLRMPLVELCLQIKLLGLGHIKPFLSRALEPPSEGAMTSAISLLHEVG 1140
Query: 1141 ALEGDEELTPLGQHLAKLPVDVLIGKMMLYGGIFGCLSSILSISAFLSYKSPFIYPKDER 1200
A+EGDEELTPLG HLAKLPVDVLIGKM+LYGGIFGCLS ILSI+AFLSYKSPFIYPKDE+
Sbjct: 1141 AVEGDEELTPLGHHLAKLPVDVLIGKMLLYGGIFGCLSPILSIAAFLSYKSPFIYPKDEK 1200
Query: 1201 QNVERAKLALLSDERYGLGESCSNDKQSDHLIMATAYKKWEILLHQKGPKAAQEFCKSYF 1260
QNV+R KLALLSD + +ND+QSDHL+M AY KW +L ++G KAAQ FC+S F
Sbjct: 1201 QNVDRVKLALLSDNGVSSSDLNNNDRQSDHLLMMVAYDKWVKILQERGMKAAQRFCESKF 1260
Query: 1261 LSSSVMYMIRDMRVQFGTLLADIGLVDLPKKSRFDRVRKEDLNGWFSDSSQPFNINSDHP 1320
LSSSVM MIRDMRVQFGTLLADIGL++LPK F +KE+L+ WFSD +QPFN+ S P
Sbjct: 1261 LSSSVMRMIRDMRVQFGTLLADIGLINLPKTGEFSGRKKENLDVWFSDPTQPFNMYSQQP 1320
Query: 1321 SIVKAVLCAGLYPNIAAGVAGITEAALSSLGRSSGPATTARPSLYDGRREVYIHPSSVNS 1380
+VKA+LCAGLYPNIAA GITE +SL + G T + + YDGRREV+IHPSS+NS
Sbjct: 1321 EVVKAILCAGLYPNIAANDKGITETTFNSLTK-QGNQTKSYSAWYDGRREVHIHPSSINS 1380
Query: 1381 NLKTFQYPFHVFLEKVETNKVFIRDTSVVSPYSILLFGGSINVQHQSGIVIIDGWLKLTA 1440
N K FQ PF VFLEKVETNKV++RDT++VSP+SILLFGGSINV HQSG V IDGWLK+ A
Sbjct: 1381 NFKAFQNPFLVFLEKVETNKVYLRDTTIVSPFSILLFGGSINVHHQSGSVTIDGWLKVAA 1440
Query: 1441 PAQIAVLFKELRLTLHSILKELIRRPETSIIINNEVLKSIVRLLLEEDKP 1479
PAQ AVLFKELRLTLHSILK+LIR+PE S I++NEV+KS+V LL+EE KP
Sbjct: 1441 PAQTAVLFKELRLTLHSILKDLIRKPEKSGIVHNEVVKSMVHLLIEEGKP 1456
BLAST of CmoCh16G004250 vs. ExPASy Swiss-Prot
Match:
Q9C6G0 (DExH-box ATP-dependent RNA helicase DExH4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g58050 PE=3 SV=1)
HSP 1 Score: 1470.7 bits (3806), Expect = 0.0e+00
Identity = 843/1496 (56.35%), Postives = 1059/1496 (70.79%), Query Frame = 0
Query: 1 MAPRKKQQQQPKQKQNNRKSNPTSSTSDSRSSTSGAKLHISAENETRLRRLLLSSGRSTP 60
MAP KK Q+ + K N ++ S + + KL IS ENE RLRRLLL+ R TP
Sbjct: 1 MAPTKKPQKNKQSK--NEIASSLIPNSGHKKPSKAPKLLISPENEDRLRRLLLNF-RRTP 60
Query: 61 SVTHADDSLSKVQKVKKLQSVYEKLSCEGFTNDQIELALSTIGDSATFEAALDWLCLNLP 120
S A +LS QK KKL ++YE LSCEGF ++QIEL LS++ D AT E ALDWLCLNLP
Sbjct: 61 SPVTA--TLSVTQKRKKLNNLYENLSCEGFLDNQIELVLSSLRDGATLETALDWLCLNLP 120
Query: 121 SSELPLKFSSGTSLHAHAGGSVRILQTAQKD---CPPVGVQSSKYKDGDKDIPVILNRR- 180
S ELP+ FS+G S G SV ++ ++KD VQ K + + + ++R
Sbjct: 121 SHELPVNFSNGASRFPSTGRSVAVISKSKKDWNVSAESSVQEVKEVPESEVLVRVKSKRD 180
Query: 181 -KDDDKLDLFQSSQAEWIKQYVEQQEEDDYGTWEDDLADEVSSKASRARSYDVIAEEYYA 240
+++D L Q SQA+WI QY+++ EE+ E + +D+ K S RS++VIA+EY
Sbjct: 181 EEEEDSLSSCQPSQADWIHQYMKRLEEE-----ELESSDDERDKVSGPRSFEVIAKEYCV 240
Query: 241 ARLEAAKAKEEGDKKRQETAGNTIRKLKQELFAQGLSDDMLASEFEFGRALDNASKDAPT 300
R A KAK +GDK Q AG I KLK+E+ A G S+ +L SEF+ R
Sbjct: 241 ERYNAIKAKRKGDKSGQSQAGLAICKLKEEMNALGPSEAILESEFQRDR----------- 300
Query: 301 QDQNFGVNQTDDVGSSLDLSVHRNESVDIDGRDRSTSKEISVDL-----MSSQEKESTVD 360
QD G + + S LD VH ESV+ D ++++D S+E+ES V
Sbjct: 301 QDCE-GAREKEVASSVLD-DVH--ESVNADAFFFQLFDDLTLDTNPVGSCKSEEQESVVS 360
Query: 361 VDGRDCSTPKEISVGLISSQGKNDCEELEDVEIGNFFVEDVETNSNVAQELLELKKREKL 420
D L+D+++G+ F EDV ELLEL+K+E +
Sbjct: 361 ND------------------------SLDDLDLGDLFDEDVPPYVPSPHELLELQKKEIM 420
Query: 421 RELSSGKNLEKLDGIWKKGDPLKIPKAVLHQLCQKAGWDAPKFNKIHRKENVFFYAVNIL 480
REL + K+L KL+GIWKKG+ KIPKA+LHQLCQ++GW APKFNK+ + F Y +++
Sbjct: 421 RELCNEKHLTKLNGIWKKGEAQKIPKALLHQLCQRSGWIAPKFNKVTGEGRNFSYTTSVM 480
Query: 481 RKASGRGKNRKAGGLITLQLPDADEIFDSAEDAQNKVAAFALYHLFPDVPVHLALIEPYA 540
RK+SG GK+R+AGGL+T+QLP E F+S +DAQN+VAAFAL+ LF D+PVH A+ EPYA
Sbjct: 481 RKSSGFGKSRQAGGLVTIQLPHQVEDFESIQDAQNRVAAFALHKLFSDLPVHFAITEPYA 540
Query: 541 TLVMQWKAGESTSKVDDNEKDRRASFVDSLLDASSSDSASKTFVGKIEQLHIEDDKKPTV 600
+LV+ WK ES + E+ RR FV+SLL+A + S + T G L + D
Sbjct: 541 SLVLIWKQEESLG-ITSREEQRREKFVESLLEADNF-SLTTTSRGIHSALPMVDSCVKEN 600
Query: 601 SDLD--SHSFVERLNSNTQNESSHLRLEHENKKKTKRYQDMLKNRAALPIASLRGDILRL 660
DLD + R NS+ E S L+ + ENKKK ++Y+DMLK RAALPI+ ++ DIL+
Sbjct: 601 DDLDVVKSNHRARRNSSMAAECSSLKQKQENKKKMQKYKDMLKTRAALPISEVKKDILQK 660
Query: 661 LKENSVLVVCGDTGSGKTTQVPQFILDDMIESGHGGLCNIVCTQPRRIAAISVAERVSDE 720
LKE VLVVCG+TGSGKTTQVPQFILDDMI+SGHGG CNI+CTQPR AI+VA+RV+DE
Sbjct: 661 LKEKDVLVVCGETGSGKTTQVPQFILDDMIDSGHGGYCNIICTQPR---AITVAQRVADE 720
Query: 721 RCEPSPGTNGSLVGYHVRLDSARNANTKLLFCTTGILLRQIVGDGNLTGITHIIVDEVHE 780
RCEP PG + S+V Y VR +AR+ T+LLFCTTGILLR++VGD L +THIIVDEVHE
Sbjct: 721 RCEPPPGFDNSVVAYQVRHQNARSDKTRLLFCTTGILLRKLVGDTTLKDVTHIIVDEVHE 780
Query: 781 RSLLDDFLLVVLKNLVEKRSAESSSP-LKVILMSATVDSNLFSGYFGNCPVITAEGRMHP 840
RSL+ DFLL++LK+L+EK+S +++ P LKVILMSATVD++ FS YFG CP+ITA+GR HP
Sbjct: 781 RSLMGDFLLIILKSLIEKQSWDNALPKLKVILMSATVDAHQFSRYFGQCPIITAQGRTHP 840
Query: 841 VTTYFLEDIYESTGYLLASDSPAAIRYEVSSGKKNAPVNYRRGKKNLILSAWGDEALLSE 900
VTTYFLEDIYE T YLLASDSPAA+ + S K VN RGKKNL+L+ WGD L+SE
Sbjct: 841 VTTYFLEDIYERTKYLLASDSPAALSSDTSITDKLGSVNVPRGKKNLMLAGWGDSYLVSE 900
Query: 901 ACTNPYYNLDCYQSYSELTQKNLERLNEDAIDYDLLEDLVIHVDKTFDEGAILVFLPGVS 960
N Y+ +++ + +DYDLLE+L+ H+D T +EGAILVFLPG+S
Sbjct: 901 DSLNTSYD-------------SIKYIASAVVDYDLLEELICHIDDTCEEGAILVFLPGMS 960
Query: 961 EINLLYDRLAASYQFGGQASDWILPLHSSIASTDQKKVFLRPPHGIRKVIIATNIAETSI 1020
EIN+L +RLAASY+F G + DW+LPLHSSIAST+QKKVFLRPP GIRKVIIATNIAETSI
Sbjct: 961 EINMLLNRLAASYRFRGASGDWLLPLHSSIASTEQKKVFLRPPKGIRKVIIATNIAETSI 1020
Query: 1021 TIDDVIYVIDCGRHKEKRYNPQKKLSSMVEDWISQANARQRRGRAGRVRPGNCFCLYTRH 1080
TI+DV+YVID G+HKE RYNP KKLSSMVEDW+S+ANARQR GRAGRV+PG+CF LYTRH
Sbjct: 1021 TIEDVVYVIDSGKHKENRYNPHKKLSSMVEDWVSKANARQRMGRAGRVKPGHCFSLYTRH 1080
Query: 1081 RYEKFMRPFQVPEMLRMPLVELCLQIKLLSLGYIRPFLSKALEPPREEAMTSAISLLYEV 1140
R+EK MRP+QVPEMLR+PLVELCL IKLL LG I+PFLSKALEPP E A+ SAI LL++V
Sbjct: 1081 RFEKLMRPYQVPEMLRVPLVELCLHIKLLGLGQIKPFLSKALEPPSESAINSAILLLHKV 1140
Query: 1141 GALEGDEELTPLGQHLAKLPVDVLIGKMMLYGGIFGCLSSILSISAFLS-YKSPFIYPKD 1200
GALEGDEELTPLG HLAKLPVD+LIGKM+LYGGIFGCLS ILSI+AFLS KSPF+Y KD
Sbjct: 1141 GALEGDEELTPLGHHLAKLPVDLLIGKMLLYGGIFGCLSPILSIAAFLSCCKSPFVYAKD 1200
Query: 1201 ERQNVERAKLALLSDERYGLGESCSNDKQSDHLIMATAYKKWEILLHQKGPKAAQEFCKS 1260
E QNV+R KLALLSD+ +ND+QSDHL+M AY+KW +LH++G KAA+ FC+S
Sbjct: 1201 E-QNVDRVKLALLSDKLESSSNLNNNDRQSDHLLMVVAYEKWVRILHEQGFKAAESFCES 1260
Query: 1261 YFLSSSVMYMIRDMRVQFGTLLADIGLVDLPK-KSRFDRVRKEDLNGWFSDSSQPFNINS 1320
FL+SSVM M+R+ RV+FG LLADIGL++LPK K R RKE+ + WFSD +QPFN+ S
Sbjct: 1261 KFLNSSVMRMMRERRVEFGMLLADIGLINLPKGKGR----RKENFDVWFSDKTQPFNMYS 1320
Query: 1321 DHPSIVKAVLCAGLYPNIAAGVAGITEAALSSLGRSSGPA--TTARPSLYDGRREVYIHP 1380
P +VKA+LCAGL PNIA G+ + R + PA T +DG+REV+IH
Sbjct: 1321 QEPEVVKAILCAGLCPNIAEGL----------VNRLTKPAEETQRYAVWHDGKREVHIHR 1380
Query: 1381 SSVNSNLKTFQYPFHVFLEKVETNK-VFIRDTSVVSPYSILLFGGSINVQHQSGIVIIDG 1440
+S+N N K FQYPF VFLEK+ET K V+++DT+VVSP+SILLFGGSINV HQSG V IDG
Sbjct: 1381 NSINKNCKAFQYPFIVFLEKLETKKVVYLQDTTVVSPFSILLFGGSINVHHQSGSVTIDG 1414
Query: 1441 WLKLTAPAQIAVLFKELRLTLHSILKELIRRPETSIIINNEVLKSIVRLLLEEDKP 1479
WLKLTAPAQ AVLFKELRLTLHSILK+LIR+PE S I++NEV+KS+V LL+EE KP
Sbjct: 1441 WLKLTAPAQTAVLFKELRLTLHSILKDLIRKPEKSGIVHNEVVKSMVHLLIEEGKP 1414
BLAST of CmoCh16G004250 vs. ExPASy Swiss-Prot
Match:
A3KMI0 (ATP-dependent RNA helicase dhx29 OS=Xenopus laevis OX=8355 GN=dhx29 PE=2 SV=1)
HSP 1 Score: 617.1 bits (1590), Expect = 5.3e-175
Identity = 476/1494 (31.86%), Postives = 754/1494 (50.47%), Query Frame = 0
Query: 11 PKQKQNNRKSNPT---SSTSDSRSSTSGAKLHISAENETRLRRLLLSSGRSTPSVTHADD 70
P K++N++ T +S+SDS S + K + E +L + ++S +
Sbjct: 52 PGSKESNKQGPKTYSFASSSDSGVSVNHDKSVLKVVIEAKLEKRIISLINEHKKLNSNKG 111
Query: 71 SLSKVQKVKKLQSVYEKLSCEGFTNDQIELAL-STIGDSATFEAALDWLCLNLPSSELPL 130
++S KKLQ +Y L F + IE A+ +T+ AALDWLCLNLP LP
Sbjct: 112 TVSGRLTSKKLQDLYMALQKLSFKAEHIEEAMTNTVLYGGDLHAALDWLCLNLPDDALPE 171
Query: 131 KFSSGTSLHAHAGGSVRILQTAQKDCPPVGVQSSKYKDGDKDIPVILNRRKDDDKLDLFQ 190
FS + + Q+ P S + G++ + K + +L
Sbjct: 172 GFSQ-QFVEEEQRARAKFQAPPQR---PSAANESATEKGEEGASL-----KGNPEL---- 231
Query: 191 SSQAEWIKQYVEQQEEDDYGTWEDDLADE----VSSKASRARSYDVIAEEYYAARLEAAK 250
+ EWI +Y EQ +DD +DD+ +E K Y + + AR +A
Sbjct: 232 -TMKEWILRYAEQGSDDDDD--DDDVKEEEKETTLEKFDPNERYLELTAKLLDARAQATA 291
Query: 251 AKEEGDKKRQETAGNTIRKLKQELFAQGLSDDMLASEFEFGRALDNASKDAPTQDQNFGV 310
K++ DK+ Q+ A IR +QE+ + L D L
Sbjct: 292 TKQDKDKQGQKEAQERIRGYQQEM--KSLEDHPLF------------------------- 351
Query: 311 NQTDDVGSSLDLSVHRNESVDIDGRDRSTSKEISVDLMSSQEKESTVDVDGRDCSTPKEI 370
N +V I +S SK+ L S+++ ++ + + P+E
Sbjct: 352 ----------------NPAVKIP-EVKSESKQPKPALPPSEDEPLNFNLFEKKENAPEE- 411
Query: 371 SVGLISSQGKNDCEELEDVEIGNFFVEDVETNSNVAQELLELKKREKLRELSSGKNLEKL 430
+ KK+ L +N +
Sbjct: 412 ----------------------------------------KAKKKPPL----DIRNFDYT 471
Query: 431 DGIWKKGDPLKIPKAVLHQLCQKAGWDAPKFNKIHRKENVFFYAVNILRKASGRGKNRKA 490
W K PK L C+K +P N F V + + R K K+
Sbjct: 472 SRSWTG----KSPKQFLIDWCRKHYSKSP---------NPSFEKVPVGKYWKSRVKIIKS 531
Query: 491 GGLITLQLPDADEIFDSAEDAQNKVAAFALYHLFPDVPVHLALIEPYATLVMQW----KA 550
+ P + + + AQ+ A ALY L VH L Y + ++W K
Sbjct: 532 HDDVMCVCPTI--VTEDSMQAQHLAATLALYELTKGQSVHQLLPPTYRNVWLEWSDAEKQ 591
Query: 551 GESTSKVDDNEKDRRASFVDSLLDASSSDSASKTFVGKIEQLH-IEDDKKPTVSDLDSHS 610
+ +K + N+ R F+ LL+ + + + ED + D + H
Sbjct: 592 VQEQNKTESNKP--RDQFITKLLNKLKVQQNQLKSCSQTQMMEDPEDSWENLACDEEQHE 651
Query: 611 FVERLNSNTQNESSHLRLEHENKKKTKRYQDMLKNRAALPIASLRGDILRLLKENSVLVV 670
+ ++ +R + + +Y+ +L +R LP+ + IL LK + V+VV
Sbjct: 652 TCP--SPLLPDDLEPIRNIFRKSRDSMKYKRLLNDREQLPVFARGNFILETLKRHRVIVV 711
Query: 671 CGDTGSGKTTQVPQFILDDMI-ESGHGGLCNIVCTQPRRIAAISVAERVSDE-RCEPSPG 730
G+TGSGK+TQVPQF+L+D++ G G CNIVCTQPRRI+A+S+A RV +E C+ PG
Sbjct: 712 AGETGSGKSTQVPQFLLEDLLFNGGSPGKCNIVCTQPRRISAMSLATRVCEELGCDSGPG 771
Query: 731 TNGSLVGYHVRLDSARNANTKLLFCTTGILLRQIVGDGNLTGITHIIVDEVHERSLLDDF 790
SL GY +R++S T+LL+CTTGILLR++ D L I+HIIVDEVHER++ DF
Sbjct: 772 GKNSLCGYQIRMESRTGEATRLLYCTTGILLRKLQEDSMLKNISHIIVDEVHERTVQSDF 831
Query: 791 LLVVLKNLVEKRSAESSSPLKVILMSATVDSNLFSGYFGNCPVITAEGRMHPVTTYFLED 850
LL++L+ ++ KR S L ++LMSATVD FS YF +CP+I GR PV + LED
Sbjct: 832 LLIILREILHKR-----SDLHLVLMSATVDCEKFSSYFTHCPIIRISGRTFPVEVFHLED 891
Query: 851 IYESTGYLLASDSPAAIRYEVSSGKKNAPVNYRRGKKNLILSAWGDEALLSEACTNPYYN 910
+ E+TG++L DS ++ + V + G S E + +++ T
Sbjct: 892 VVEATGFVLEQDSEYCQKFLEDEEEITLSVTGKGGS-----SKKYQEFIPAQSGT----G 951
Query: 911 LDC---YQSYSELTQKNLERLNEDAIDYDLLEDLVIHVDKTFD----EGAILVFLPGVSE 970
LD YQ YS T+ + +N + I+ DL+ +L++ +D + + EGA+L+FLPG+++
Sbjct: 952 LDLGARYQRYSSQTRHAVLYMNPNKINLDLILELLVFLDISPEYRNVEGAVLIFLPGLAD 1011
Query: 971 INLLYDRLAASYQFGGQASDWILPLHSSIASTDQKKVFLRPPHGIRKVIIATNIAETSIT 1030
I LYD L++ +F + ++ LHS ++S DQ + F+ PP G RK+++ATNIAET IT
Sbjct: 1012 IQQLYDILSSDKRFHDRRRYKLIALHSILSSQDQAEAFILPPAGTRKIVLATNIAETGIT 1071
Query: 1031 IDDVIYVIDCGRHKEKRYNPQKKLSSMVEDWISQANARQRRGRAGRVRPGNCFCLYTRHR 1090
I DV++VID GR KE RY+ ++SS+VE +IS+A+A QR+GRAGRVR G CF LYTR R
Sbjct: 1072 IPDVVFVIDAGRTKENRYHESSQMSSLVETFISKASALQRQGRAGRVRNGYCFRLYTRER 1131
Query: 1091 YEKFMRPFQVPEMLRMPLVELCLQIKLLSLGYIRPFLSKALEPPREEAMTSAISLLYEVG 1150
+E FM + VPE+LR+PL ELCL I LG FLSKAL+PP+ + +++A+SLL ++G
Sbjct: 1132 FESFME-YSVPEILRVPLEELCLHIMKCDLGSPEDFLSKALDPPQLQVISNAMSLLRKIG 1191
Query: 1151 ALE-GDEELTPLGQHLAKLPVDVLIGKMMLYGGIFGCLSSILSISAFLSYKSPFIYPKDE 1210
A E +LTPLGQHLA LPV+V IGKM+++G IFGCL ++ +++A ++ KSPF+ P E
Sbjct: 1192 ACELSQPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDAVATLAATMTEKSPFVTPIGE 1251
Query: 1211 RQNVERAKLALLSDERYGLGESCSNDKQSDHLIMATAYKKWEILLHQKGPKAAQEFCKSY 1270
+ + AK ++ SDH+ + AY W+ + +G A +C+
Sbjct: 1252 KDRADLAKSSMAV-------------ANSDHVTIFRAYLGWK-AIRPEGYAAEMSYCRKN 1311
Query: 1271 FLSSSVMYMIRDMRVQFGTLLADIGLVDLPKKSRFDRVRKEDLNGWFSDSSQPFNINSDH 1330
FL+ + I D++ + L+ L + + F+ R + NG SS ++++
Sbjct: 1312 FLNRKALLTIEDVKQE---------LIRLVRAAGFECPRSVEANGL---SSAMKALSAEE 1362
Query: 1331 PSIVKAVLCAGLYPNIA----AGVAGITEAALSSLGRSSGPATTARPSLYDGRREVYIHP 1390
S++KA+L AGLY N+ ITE + + G A +HP
Sbjct: 1372 TSLLKAILTAGLYDNVGKILFTKSVDITEKLACIVETAQGKA--------------QVHP 1362
Query: 1391 SSVNSNLKTFQYPFHVFLEKVETNKVFIRDTSVVSPYSILLFGGSINVQHQSGIVIIDGW 1450
SSVN +L+ Y + ++ EKV+ +KVF+R+T+++SP+ +LLFGG I VQH+ ++ +D W
Sbjct: 1432 SSVNRDLQI--YGWLLYQEKVKYSKVFLRETTLISPFPVLLFGGDIAVQHRERLLTVDDW 1362
Query: 1451 LKLTAPAQIAVLFKELRLTLHSILKELIRRPETSIIINNEVLKSIVRLLLEEDK 1478
+ AP +IAV+FKELR+ + S+LK+ + P+ S + ++++ +I++ L++ ++
Sbjct: 1492 IHFQAPVKIAVIFKELRILIESVLKQKLENPKMS--LKDDMILNIIKELIKTER 1362
BLAST of CmoCh16G004250 vs. ExPASy Swiss-Prot
Match:
Q6PGC1 (ATP-dependent RNA helicase DHX29 OS=Mus musculus OX=10090 GN=Dhx29 PE=1 SV=1)
HSP 1 Score: 607.4 bits (1565), Expect = 4.2e-172
Identity = 464/1486 (31.22%), Postives = 745/1486 (50.13%), Query Frame = 0
Query: 9 QQPKQKQNNRKSNPTSSTSDSRSSTSGAKLHISAENETRLRRLLLSSGRSTPSVTHADDS 68
++P+ KQ K +S +DS S + K + +L + ++ +
Sbjct: 54 REPRVKQ-GPKIYSFNSANDSGGSANLDKSILKVVINNKLEQRIIGVINEHKKQNSDRGA 113
Query: 69 LSKVQKVKKLQSVYEKLSCEGFTNDQIELAL-STIGDSATFEAALDWLCLNLPSSELPLK 128
+S KKLQ +Y L F IE A+ +T+ +ALDWLCLNL LP
Sbjct: 114 ISGRLSAKKLQDLYMALQAFSFKTKDIEDAMTNTLLHGGDLHSALDWLCLNLSDDALPEG 173
Query: 129 FSSGTSLHAHAGGSVRILQTAQKDCPPVGVQSSKYKDGDKDIPVILNRRKDDDKLDLFQS 188
FS S Q+ Q Q +K K ++D + +K++ +++
Sbjct: 174 FSQ--EFEEQQPKSRPKFQSVQIQATLSPPQQTKTKRQEEDPKI--KPKKEETTVEV--- 233
Query: 189 SQAEWIKQYVEQQEEDDYGTWEDDLADEVSSKASRARSYDVIAEEYYAARLEAAKAKEEG 248
+ EWI +Y EQQ+E++ G L +E K + Y +A A+ +AA K E
Sbjct: 234 NMKEWILRYAEQQDEEEKGEGSKGLEEE--EKFDPNQRYLNLAARLLDAKEQAAAFKLEK 293
Query: 249 DKKRQETAGNTIRKLKQELFAQGLSDDMLASEFEFGRALDNASKDAPTQDQNFGVNQTDD 308
+K+ Q+ A IRK ++E+ + L D + + A K + Q++ +
Sbjct: 294 NKQGQKEAQEKIRKFQREM--ETLEDHPI---------FNPAIKISHQQNEKKKPAPATE 353
Query: 309 VGSSLDLSVHRNESVDIDGRDRSTSKEISVDLMSSQEKESTVDVDGRDCSTPKEISVGLI 368
S+L+L++ + +T +E +K+ DV D +
Sbjct: 354 AESALNLNLFEKSAA-------ATEEE-------KGKKKEPHDVRNFDYTAR-------- 413
Query: 369 SSQGKNDCEELEDVEIGNFFVEDVETNSNVAQELLELKKREKLRELSSGKNLEKLDGIWK 428
S GK+ + L D W
Sbjct: 414 SWTGKSPKQFLID---------------------------------------------WV 473
Query: 429 KGDPLKIPKAVLHQLCQKAGWDAPKFNKIHRKENVFFYAVNILRKASGRGKNRKAGGLIT 488
+ + K P ++ W + + +++V IL
Sbjct: 474 RKNLPKSPNPSFEKVAVGRYWKC-RVRVVRSEDDVLVVCPTILT---------------- 533
Query: 489 LQLPDADEIFDSAEDAQNKVAAFALYHLFPDVPVHLALIEPYATLVMQW----KAGESTS 548
+ AQ+ A ALY L VH L Y + ++W K E +
Sbjct: 534 ----------EDGMQAQHLGATLALYRLVKGQSVHQLLPPTYRDVWLEWSDEEKKREELN 593
Query: 549 KVDDNEKDRRASFVDSLLDASSSDSASKTFVGKIEQLHIEDDKKPTVSDL--DSHSFVER 608
K++ N+ R F+ LL+ + + +D + + +L D
Sbjct: 594 KMETNKP--RDLFIAKLLNKLKQQQQQQQQQRPESEKGGSEDPEESWENLVSDEDLAALS 653
Query: 609 LNSNTQNESSHLRLEHENKKKTKRYQDMLKNRAALPIASLRGDILRLLKENSVLVVCGDT 668
L + + + +R + T +YQ +LK R LP+ R I+ LK + V+VV G+T
Sbjct: 654 LEPTSAEDLAPVRSLFRRLQSTPKYQRLLKERQQLPVFKHRDSIVETLKRHRVVVVAGET 713
Query: 669 GSGKTTQVPQFILDDMIESGHGG-LCNIVCTQPRRIAAISVAERVSDE-RCEPSPGTNGS 728
GSGK+TQVP F+L+D++ G CNIVCTQPRRI+A+S+A RV +E CE PG S
Sbjct: 714 GSGKSTQVPHFLLEDLLLDECGARKCNIVCTQPRRISAVSLATRVCEELGCESGPGGRNS 773
Query: 729 LVGYHVRLDSARNANTKLLFCTTGILLRQIVGDGNLTGITHIIVDEVHERSLLDDFLLVV 788
L GY +R++S + +T+LL+CTTG+LLR++ DG L ++H+IVDEVHERS+ DFLLV+
Sbjct: 774 LCGYQIRMESRASESTRLLYCTTGVLLRKLQEDGLLADVSHVIVDEVHERSVQSDFLLVI 833
Query: 789 LKNLVEKRSAESSSPLKVILMSATVDSNLFSGYFGNCPVITAEGRMHPVTTYFLEDIYES 848
LK +++KR S L +ILMSATVDS+ FS YF +CP++ GR +PV + LEDI E
Sbjct: 834 LKEILQKR-----SDLHLILMSATVDSDKFSTYFTHCPILRISGRSYPVEVFHLEDIVEE 893
Query: 849 TGYLLASDSPAAIRYEVSSGKKNAPVNYRRGKKNLILSAWGDEALLSEACTNPYYNLDCY 908
TG++L DS ++ + V + G E + ++ +P N Y
Sbjct: 894 TGFVLEKDSEYCQKFLEEEEEITINVTSKAGGVKKY-----QEYIPVQSGASPELN-PFY 953
Query: 909 QSYSELTQKNLERLNEDAIDYDLLEDLVIHVDKTFD----EGAILVFLPGVSEINLLYDR 968
Q YS TQ + +N I+ DL+ +L++++DK+ EGA+L+FLPG++ I LYD
Sbjct: 954 QKYSSRTQHAILYMNPHKINLDLILELLVYLDKSPQFRNIEGAVLIFLPGLAHIQQLYDL 1013
Query: 969 LAASYQFGGQASDWILPLHSSIASTDQKKVFLRPPHGIRKVIIATNIAETSITIDDVIYV 1028
L++ +F + ++ LHS +++ DQ F+ PP G+RK+++ATNIAET ITI DV++V
Sbjct: 1014 LSSDRRFYSERYQ-VIALHSVLSTQDQAAAFMFPPPGVRKIVLATNIAETGITIPDVVFV 1073
Query: 1029 IDCGRHKEKRYNPQKKLSSMVEDWISQANARQRRGRAGRVRPGNCFCLYTRHRYEKFMRP 1088
ID GR KE +Y+ ++SS+VE ++S+A+A QR+GRAGRVR G CF LYTR R+E F+
Sbjct: 1074 IDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRLYTRERFEGFL-D 1133
Query: 1089 FQVPEMLRMPLVELCLQIKLLSLGYIRPFLSKALEPPREEAMTSAISLLYEVGALEGDE- 1148
+ VPE+LR+PL ELCL I LG FLSKAL+PP+ + +++A++LL ++GA E +E
Sbjct: 1134 YSVPEILRVPLEELCLHIMKCDLGSPEDFLSKALDPPQLQVISNAMNLLRKIGACEPNEP 1193
Query: 1149 ELTPLGQHLAKLPVDVLIGKMMLYGGIFGCLSSILSISAFLSYKSPFIYPKDERQNVERA 1208
+LTPLGQHLA LPV+V IGKM+++G IFGCL + +++A ++ KSPFI P + + A
Sbjct: 1194 KLTPLGQHLAALPVNVKIGKMLIFGAIFGCLEPVATLAAVMTEKSPFITPIGRKDEADLA 1253
Query: 1209 KLALLSDERYGLGESCSNDKQSDHLIMATAYKKWEILLHQKGPKAAQEFCKSYFLSSSVM 1268
K +L + SDHL + AY W+ + G ++ +C+ FL+ + +
Sbjct: 1254 KSSLAVAD-------------SDHLTIYNAYLGWKKAQQEGGFRSEISYCQRNFLNRTSL 1313
Query: 1269 YMIRDMRVQFGTLLADIGLVDLPKKSRFDRVRKEDLNGWFSDSSQPFNINSDHPSIVKAV 1328
+ D++ + L+ G P + P ++ +++KAV
Sbjct: 1314 LTLEDVKQELMKLVKAAGFSSSPS---------------WEGRKGPQTLSFQDIALLKAV 1364
Query: 1329 LCAGLYPNI----AAGVAGITEAALSSLGRSSGPATTARPSLYDGRREVYIHPSSVNSNL 1388
L AGLY ++ +TE + + G A +HPSSVN +L
Sbjct: 1374 LAAGLYDSVGKIMCTKSVDVTEKLACMVETAQGKA--------------QVHPSSVNRDL 1364
Query: 1389 KTFQYPFHVFLEKVETNKVFIRDTSVVSPYSILLFGGSINVQHQSGIVIIDGWLKLTAPA 1448
+T Y + ++ EKV +V++R+T++++P+ +LLFGG I VQH+ ++ +DGW+ AP
Sbjct: 1434 QT--YGWLLYQEKVRYTRVYLRETTLITPFPVLLFGGDIEVQHRERLLSVDGWIYFQAPV 1364
Query: 1449 QIAVLFKELRLTLHSILKELIRRPETSIIINNEVLKSIVRLLLEED 1477
+IAV+FK+LR+ + S+L++ + P+ S + N+++L+ I L+ E+
Sbjct: 1494 KIAVIFKQLRVLIDSVLRKKLENPKMS-LENDKILQIITELIKTEN 1364
BLAST of CmoCh16G004250 vs. ExPASy Swiss-Prot
Match:
Q7Z478 (ATP-dependent RNA helicase DHX29 OS=Homo sapiens OX=9606 GN=DHX29 PE=1 SV=2)
HSP 1 Score: 605.9 bits (1561), Expect = 1.2e-171
Identity = 471/1490 (31.61%), Postives = 749/1490 (50.27%), Query Frame = 0
Query: 9 QQPKQKQNNRKSNPTSSTSDSRSSTSGAKLHISAENETRLRRLLLSSGRSTPSVTHADDS 68
++P+ KQ K +ST+DS + K + +L + ++ +
Sbjct: 56 REPRVKQ-GPKIYSFNSTNDSSGPANLDKSILKVVINNKLEQRIIGVINEHKKQNNDKGM 115
Query: 69 LSKVQKVKKLQSVYEKLSCEGFTNDQIELAL-STIGDSATFEAALDWLCLNLPSSELPLK 128
+S KKLQ +Y L F IE A+ +T+ +ALDWLCLNL LP
Sbjct: 116 ISGRLTAKKLQDLYMALQAFSFKTKDIEDAMTNTLLYGGDLHSALDWLCLNLSDDALPEG 175
Query: 129 FSSG-TSLHAHAGGSVRILQTAQKDCPPVGVQSSKYKDGDKDIPVILNRRKDDDKLDLFQ 188
FS + + Q PP+ ++ Y++ K P +K++ +++
Sbjct: 176 FSQEFEEQQPKSRPKFQSPQIQATISPPLQPKTKTYEEDPKSKP-----KKEEKNMEV-- 235
Query: 189 SSQAEWIKQYVEQQEEDDYGTWEDDLADEVSSKASRARSYDVIAEEYYAARLEAAKAKEE 248
+ EWI +Y EQQ E++ E+ + E K Y +A + A+ +AA K E
Sbjct: 236 -NMKEWILRYAEQQNEEEKN--ENSKSLEEEEKFDPNERYLHLAAKLLDAKEQAATFKLE 295
Query: 249 GDKKRQETAGNTIRKLKQELFAQGLSDDMLASEFEFGRALDNASKDAPTQDQNFGVNQTD 308
+K+ Q+ A IRK ++E+ +D P
Sbjct: 296 KNKQGQKEAQEKIRKFQREM---------------------ETLEDHPV----------- 355
Query: 309 DVGSSLDLSVHRNESVDIDGRDRSTSKEISVDLMSSQEKESTVDVDGRDCSTPKEISVGL 368
++ +S +NE K+ V +G
Sbjct: 356 -FNPAMKISHQQNE-----------------------RKKPPVATEGESAL--------- 415
Query: 369 ISSQGKNDCEELEDVEIGNFFVEDVETNSNVAQELLELKKREKLRELSSGKNLEKLDGIW 428
NF ++ S A E ++++K +E +N + W
Sbjct: 416 ------------------NF---NLFEKSAAATE----EEKDKKKEPHDVRNFDYTARSW 475
Query: 429 KKGDPLKIPKAVLHQLCQKAGWDAPKFNKIHRKENVFFYAVNILRKASGRGKNRKAGGLI 488
K PK L +K + + N F V + R R + K+ +
Sbjct: 476 TG----KSPKQFLIDWVRK---------NLPKSPNPSFEKVPVGRYWKCRVRVIKSEDDV 535
Query: 489 TLQLPDADEIFDSAEDAQNKVAAFALYHLFPDVPVHLALIEPYATLVMQW----KAGEST 548
+ P + + AQ+ A ALY L VH L Y + ++W K E
Sbjct: 536 LVVCPTI--LTEDGMQAQHLGATLALYRLVKGQSVHQLLPPTYRDVWLEWSDAEKKREEL 595
Query: 549 SKVDDNEKDRRASFVDSLLDASSSDSASKTFVGKIEQLHIEDDKKP---TVSDLDSHSFV 608
+K++ N+ R F+ LL+ + + ++ + ED ++ VSD D +
Sbjct: 596 NKMETNKP--RDLFIAKLLNKLKQQQQQQQQHSENKRENSEDPEESWENLVSDEDFSAL- 655
Query: 609 ERLNSNTQNESSHLRLEHENKKKTKRYQDMLKNRAALPIASLRGDILRLLKENSVLVVCG 668
L S + +R + T +YQ +LK R LP+ R I+ LK + V+VV G
Sbjct: 656 -SLESANVEDLEPVRNLFRKLQSTPKYQKLLKERQQLPVFKHRDSIVETLKRHRVVVVAG 715
Query: 669 DTGSGKTTQVPQFILDD-MIESGHGGLCNIVCTQPRRIAAISVAERVSDE-RCEPSPGTN 728
+TGSGK+TQVP F+L+D ++ CNIVCTQPRRI+A+S+A RV DE CE PG
Sbjct: 716 ETGSGKSTQVPHFLLEDLLLNEWEASKCNIVCTQPRRISAVSLANRVCDELGCENGPGGR 775
Query: 729 GSLVGYHVRLDSARNANTKLLFCTTGILLRQIVGDGNLTGITHIIVDEVHERSLLDDFLL 788
SL GY +R++S +T+LL+CTTG+LLR++ DG L+ ++H+IVDEVHERS+ DFLL
Sbjct: 776 NSLCGYQIRMESRACESTRLLYCTTGVLLRKLQEDGLLSNVSHVIVDEVHERSVQSDFLL 835
Query: 789 VVLKNLVEKRSAESSSPLKVILMSATVDSNLFSGYFGNCPVITAEGRMHPVTTYFLEDIY 848
++LK +++KR S L +ILMSATVDS FS YF +CP++ GR +PV + LEDI
Sbjct: 836 IILKEILQKR-----SDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFHLEDII 895
Query: 849 ESTGYLLASDSPAAIRYEVSSGKKNAPVNYRRG--KKNLILSAWGDEALLSEACTNPYYN 908
E TG++L DS ++ + V + G KK + + A NP+
Sbjct: 896 EETGFVLEKDSEYCQKFLEEEEEVTINVTSKAGGIKK---YQEYIPVQTGAHADLNPF-- 955
Query: 909 LDCYQSYSELTQKNLERLNEDAIDYDLLEDLVIHVDKTFD----EGAILVFLPGVSEINL 968
YQ YS TQ + +N I+ DL+ +L+ ++DK+ EGA+L+FLPG++ I
Sbjct: 956 ---YQKYSSRTQHAILYMNPHKINLDLILELLAYLDKSPQFRNIEGAVLIFLPGLAHIQQ 1015
Query: 969 LYDRLAASYQFGGQASDWILPLHSSIASTDQKKVFLRPPHGIRKVIIATNIAETSITIDD 1028
LYD L+ +F + ++ LHS +++ DQ F PP G+RK+++ATNIAET ITI D
Sbjct: 1016 LYDLLSNDRRFYSERYK-VIALHSILSTQDQAAAFTLPPPGVRKIVLATNIAETGITIPD 1075
Query: 1029 VIYVIDCGRHKEKRYNPQKKLSSMVEDWISQANARQRRGRAGRVRPGNCFCLYTRHRYEK 1088
V++VID GR KE +Y+ ++SS+VE ++S+A+A QR+GRAGRVR G CF +YTR R+E
Sbjct: 1076 VVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEG 1135
Query: 1089 FMRPFQVPEMLRMPLVELCLQIKLLSLGYIRPFLSKALEPPREEAMTSAISLLYEVGALE 1148
FM + VPE+LR+PL ELCL I +LG FLSKAL+PP+ + +++A++LL ++GA E
Sbjct: 1136 FM-DYSVPEILRVPLEELCLHIMKCNLGSPEDFLSKALDPPQLQVISNAMNLLRKIGACE 1195
Query: 1149 GDE-ELTPLGQHLAKLPVDVLIGKMMLYGGIFGCLSSILSISAFLSYKSPFIYPKDERQN 1208
+E +LTPLGQHLA LPV+V IGKM+++G IFGCL + +++A ++ KSPF P +
Sbjct: 1196 LNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPIGRKDE 1255
Query: 1209 VERAKLALLSDERYGLGESCSNDKQSDHLIMATAYKKWEILLHQKGPKAAQEFCKSYFLS 1268
+ AK AL + SDHL + AY W+ + G ++ +C+ FL+
Sbjct: 1256 ADLAKSALAMAD-------------SDHLTIYNAYLGWKKARQEGGYRSEITYCRRNFLN 1315
Query: 1269 SSVMYMIRDMRVQFGTLLADIGLVDLPKKSRFDRVRKEDLNGWFSDSSQPFNINSDHPSI 1328
+ + + D++ + L+ L K + F W + + ++ ++
Sbjct: 1316 RTSLLTLEDVKQE---------LIKLVKAAGFS--SSTTSTSWEGNRASQ-TLSFQEIAL 1368
Query: 1329 VKAVLCAGLYPNIAAGV----AGITEAALSSLGRSSGPATTARPSLYDGRREVYIHPSSV 1388
+KAVL AGLY N+ + +TE + + G A +HPSSV
Sbjct: 1376 LKAVLVAGLYDNVGKIIYTKSVDVTEKLACIVETAQGKA--------------QVHPSSV 1368
Query: 1389 NSNLKTFQYPFHVFLEKVETNKVFIRDTSVVSPYSILLFGGSINVQHQSGIVIIDGWLKL 1448
N +L+T + + ++ EK+ +V++R+T++++P+ +LLFGG I VQH+ ++ IDGW+
Sbjct: 1436 NRDLQT--HGWLLYQEKIRYARVYLRETTLITPFPVLLFGGDIEVQHRERLLSIDGWIYF 1368
Query: 1449 TAPAQIAVLFKELRLTLHSILKELIRRPETSIIINNEVLKSIVRLLLEED 1477
AP +IAV+FK+LR+ + S+L++ + P+ S + N+++L+ I L+ E+
Sbjct: 1496 QAPVKIAVIFKQLRVLIDSVLRKKLENPKMS-LENDKILQIITELIKTEN 1368
BLAST of CmoCh16G004250 vs. ExPASy TrEMBL
Match:
A0A6J1E7M1 (DExH-box ATP-dependent RNA helicase DExH7, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111430622 PE=4 SV=1)
HSP 1 Score: 2875.5 bits (7453), Expect = 0.0e+00
Identity = 1480/1480 (100.00%), Postives = 1480/1480 (100.00%), Query Frame = 0
Query: 1 MAPRKKQQQQPKQKQNNRKSNPTSSTSDSRSSTSGAKLHISAENETRLRRLLLSSGRSTP 60
MAPRKKQQQQPKQKQNNRKSNPTSSTSDSRSSTSGAKLHISAENETRLRRLLLSSGRSTP
Sbjct: 1 MAPRKKQQQQPKQKQNNRKSNPTSSTSDSRSSTSGAKLHISAENETRLRRLLLSSGRSTP 60
Query: 61 SVTHADDSLSKVQKVKKLQSVYEKLSCEGFTNDQIELALSTIGDSATFEAALDWLCLNLP 120
SVTHADDSLSKVQKVKKLQSVYEKLSCEGFTNDQIELALSTIGDSATFEAALDWLCLNLP
Sbjct: 61 SVTHADDSLSKVQKVKKLQSVYEKLSCEGFTNDQIELALSTIGDSATFEAALDWLCLNLP 120
Query: 121 SSELPLKFSSGTSLHAHAGGSVRILQTAQKDCPPVGVQSSKYKDGDKDIPVILNRRKDDD 180
SSELPLKFSSGTSLHAHAGGSVRILQTAQKDCPPVGVQSSKYKDGDKDIPVILNRRKDDD
Sbjct: 121 SSELPLKFSSGTSLHAHAGGSVRILQTAQKDCPPVGVQSSKYKDGDKDIPVILNRRKDDD 180
Query: 181 KLDLFQSSQAEWIKQYVEQQEEDDYGTWEDDLADEVSSKASRARSYDVIAEEYYAARLEA 240
KLDLFQSSQAEWIKQYVEQQEEDDYGTWEDDLADEVSSKASRARSYDVIAEEYYAARLEA
Sbjct: 181 KLDLFQSSQAEWIKQYVEQQEEDDYGTWEDDLADEVSSKASRARSYDVIAEEYYAARLEA 240
Query: 241 AKAKEEGDKKRQETAGNTIRKLKQELFAQGLSDDMLASEFEFGRALDNASKDAPTQDQNF 300
AKAKEEGDKKRQETAGNTIRKLKQELFAQGLSDDMLASEFEFGRALDNASKDAPTQDQNF
Sbjct: 241 AKAKEEGDKKRQETAGNTIRKLKQELFAQGLSDDMLASEFEFGRALDNASKDAPTQDQNF 300
Query: 301 GVNQTDDVGSSLDLSVHRNESVDIDGRDRSTSKEISVDLMSSQEKESTVDVDGRDCSTPK 360
GVNQTDDVGSSLDLSVHRNESVDIDGRDRSTSKEISVDLMSSQEKESTVDVDGRDCSTPK
Sbjct: 301 GVNQTDDVGSSLDLSVHRNESVDIDGRDRSTSKEISVDLMSSQEKESTVDVDGRDCSTPK 360
Query: 361 EISVGLISSQGKNDCEELEDVEIGNFFVEDVETNSNVAQELLELKKREKLRELSSGKNLE 420
EISVGLISSQGKNDCEELEDVEIGNFFVEDVETNSNVAQELLELKKREKLRELSSGKNLE
Sbjct: 361 EISVGLISSQGKNDCEELEDVEIGNFFVEDVETNSNVAQELLELKKREKLRELSSGKNLE 420
Query: 421 KLDGIWKKGDPLKIPKAVLHQLCQKAGWDAPKFNKIHRKENVFFYAVNILRKASGRGKNR 480
KLDGIWKKGDPLKIPKAVLHQLCQKAGWDAPKFNKIHRKENVFFYAVNILRKASGRGKNR
Sbjct: 421 KLDGIWKKGDPLKIPKAVLHQLCQKAGWDAPKFNKIHRKENVFFYAVNILRKASGRGKNR 480
Query: 481 KAGGLITLQLPDADEIFDSAEDAQNKVAAFALYHLFPDVPVHLALIEPYATLVMQWKAGE 540
KAGGLITLQLPDADEIFDSAEDAQNKVAAFALYHLFPDVPVHLALIEPYATLVMQWKAGE
Sbjct: 481 KAGGLITLQLPDADEIFDSAEDAQNKVAAFALYHLFPDVPVHLALIEPYATLVMQWKAGE 540
Query: 541 STSKVDDNEKDRRASFVDSLLDASSSDSASKTFVGKIEQLHIEDDKKPTVSDLDSHSFVE 600
STSKVDDNEKDRRASFVDSLLDASSSDSASKTFVGKIEQLHIEDDKKPTVSDLDSHSFVE
Sbjct: 541 STSKVDDNEKDRRASFVDSLLDASSSDSASKTFVGKIEQLHIEDDKKPTVSDLDSHSFVE 600
Query: 601 RLNSNTQNESSHLRLEHENKKKTKRYQDMLKNRAALPIASLRGDILRLLKENSVLVVCGD 660
RLNSNTQNESSHLRLEHENKKKTKRYQDMLKNRAALPIASLRGDILRLLKENSVLVVCGD
Sbjct: 601 RLNSNTQNESSHLRLEHENKKKTKRYQDMLKNRAALPIASLRGDILRLLKENSVLVVCGD 660
Query: 661 TGSGKTTQVPQFILDDMIESGHGGLCNIVCTQPRRIAAISVAERVSDERCEPSPGTNGSL 720
TGSGKTTQVPQFILDDMIESGHGGLCNIVCTQPRRIAAISVAERVSDERCEPSPGTNGSL
Sbjct: 661 TGSGKTTQVPQFILDDMIESGHGGLCNIVCTQPRRIAAISVAERVSDERCEPSPGTNGSL 720
Query: 721 VGYHVRLDSARNANTKLLFCTTGILLRQIVGDGNLTGITHIIVDEVHERSLLDDFLLVVL 780
VGYHVRLDSARNANTKLLFCTTGILLRQIVGDGNLTGITHIIVDEVHERSLLDDFLLVVL
Sbjct: 721 VGYHVRLDSARNANTKLLFCTTGILLRQIVGDGNLTGITHIIVDEVHERSLLDDFLLVVL 780
Query: 781 KNLVEKRSAESSSPLKVILMSATVDSNLFSGYFGNCPVITAEGRMHPVTTYFLEDIYEST 840
KNLVEKRSAESSSPLKVILMSATVDSNLFSGYFGNCPVITAEGRMHPVTTYFLEDIYEST
Sbjct: 781 KNLVEKRSAESSSPLKVILMSATVDSNLFSGYFGNCPVITAEGRMHPVTTYFLEDIYEST 840
Query: 841 GYLLASDSPAAIRYEVSSGKKNAPVNYRRGKKNLILSAWGDEALLSEACTNPYYNLDCYQ 900
GYLLASDSPAAIRYEVSSGKKNAPVNYRRGKKNLILSAWGDEALLSEACTNPYYNLDCYQ
Sbjct: 841 GYLLASDSPAAIRYEVSSGKKNAPVNYRRGKKNLILSAWGDEALLSEACTNPYYNLDCYQ 900
Query: 901 SYSELTQKNLERLNEDAIDYDLLEDLVIHVDKTFDEGAILVFLPGVSEINLLYDRLAASY 960
SYSELTQKNLERLNEDAIDYDLLEDLVIHVDKTFDEGAILVFLPGVSEINLLYDRLAASY
Sbjct: 901 SYSELTQKNLERLNEDAIDYDLLEDLVIHVDKTFDEGAILVFLPGVSEINLLYDRLAASY 960
Query: 961 QFGGQASDWILPLHSSIASTDQKKVFLRPPHGIRKVIIATNIAETSITIDDVIYVIDCGR 1020
QFGGQASDWILPLHSSIASTDQKKVFLRPPHGIRKVIIATNIAETSITIDDVIYVIDCGR
Sbjct: 961 QFGGQASDWILPLHSSIASTDQKKVFLRPPHGIRKVIIATNIAETSITIDDVIYVIDCGR 1020
Query: 1021 HKEKRYNPQKKLSSMVEDWISQANARQRRGRAGRVRPGNCFCLYTRHRYEKFMRPFQVPE 1080
HKEKRYNPQKKLSSMVEDWISQANARQRRGRAGRVRPGNCFCLYTRHRYEKFMRPFQVPE
Sbjct: 1021 HKEKRYNPQKKLSSMVEDWISQANARQRRGRAGRVRPGNCFCLYTRHRYEKFMRPFQVPE 1080
Query: 1081 MLRMPLVELCLQIKLLSLGYIRPFLSKALEPPREEAMTSAISLLYEVGALEGDEELTPLG 1140
MLRMPLVELCLQIKLLSLGYIRPFLSKALEPPREEAMTSAISLLYEVGALEGDEELTPLG
Sbjct: 1081 MLRMPLVELCLQIKLLSLGYIRPFLSKALEPPREEAMTSAISLLYEVGALEGDEELTPLG 1140
Query: 1141 QHLAKLPVDVLIGKMMLYGGIFGCLSSILSISAFLSYKSPFIYPKDERQNVERAKLALLS 1200
QHLAKLPVDVLIGKMMLYGGIFGCLSSILSISAFLSYKSPFIYPKDERQNVERAKLALLS
Sbjct: 1141 QHLAKLPVDVLIGKMMLYGGIFGCLSSILSISAFLSYKSPFIYPKDERQNVERAKLALLS 1200
Query: 1201 DERYGLGESCSNDKQSDHLIMATAYKKWEILLHQKGPKAAQEFCKSYFLSSSVMYMIRDM 1260
DERYGLGESCSNDKQSDHLIMATAYKKWEILLHQKGPKAAQEFCKSYFLSSSVMYMIRDM
Sbjct: 1201 DERYGLGESCSNDKQSDHLIMATAYKKWEILLHQKGPKAAQEFCKSYFLSSSVMYMIRDM 1260
Query: 1261 RVQFGTLLADIGLVDLPKKSRFDRVRKEDLNGWFSDSSQPFNINSDHPSIVKAVLCAGLY 1320
RVQFGTLLADIGLVDLPKKSRFDRVRKEDLNGWFSDSSQPFNINSDHPSIVKAVLCAGLY
Sbjct: 1261 RVQFGTLLADIGLVDLPKKSRFDRVRKEDLNGWFSDSSQPFNINSDHPSIVKAVLCAGLY 1320
Query: 1321 PNIAAGVAGITEAALSSLGRSSGPATTARPSLYDGRREVYIHPSSVNSNLKTFQYPFHVF 1380
PNIAAGVAGITEAALSSLGRSSGPATTARPSLYDGRREVYIHPSSVNSNLKTFQYPFHVF
Sbjct: 1321 PNIAAGVAGITEAALSSLGRSSGPATTARPSLYDGRREVYIHPSSVNSNLKTFQYPFHVF 1380
Query: 1381 LEKVETNKVFIRDTSVVSPYSILLFGGSINVQHQSGIVIIDGWLKLTAPAQIAVLFKELR 1440
LEKVETNKVFIRDTSVVSPYSILLFGGSINVQHQSGIVIIDGWLKLTAPAQIAVLFKELR
Sbjct: 1381 LEKVETNKVFIRDTSVVSPYSILLFGGSINVQHQSGIVIIDGWLKLTAPAQIAVLFKELR 1440
Query: 1441 LTLHSILKELIRRPETSIIINNEVLKSIVRLLLEEDKPLT 1481
LTLHSILKELIRRPETSIIINNEVLKSIVRLLLEEDKPLT
Sbjct: 1441 LTLHSILKELIRRPETSIIINNEVLKSIVRLLLEEDKPLT 1480
BLAST of CmoCh16G004250 vs. ExPASy TrEMBL
Match:
A0A6J1J9M9 (DExH-box ATP-dependent RNA helicase DExH7, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111482569 PE=4 SV=1)
HSP 1 Score: 2831.6 bits (7339), Expect = 0.0e+00
Identity = 1458/1480 (98.51%), Postives = 1467/1480 (99.12%), Query Frame = 0
Query: 1 MAPRKKQQQQPKQKQNNRKSNPTSSTSDSRSSTSGAKLHISAENETRLRRLLLSSGRSTP 60
MAPRKK QQQPKQKQNNRKSNPTSST DSRSSTSGAKLHISAENETRLRRLLLSSGRSTP
Sbjct: 1 MAPRKK-QQQPKQKQNNRKSNPTSSTPDSRSSTSGAKLHISAENETRLRRLLLSSGRSTP 60
Query: 61 SVTHADDSLSKVQKVKKLQSVYEKLSCEGFTNDQIELALSTIGDSATFEAALDWLCLNLP 120
SVTHADDSLSKVQKVKKLQSVYEKLSCEGFTNDQIELALSTIGD ATFEAALDWLCLNLP
Sbjct: 61 SVTHADDSLSKVQKVKKLQSVYEKLSCEGFTNDQIELALSTIGDGATFEAALDWLCLNLP 120
Query: 121 SSELPLKFSSGTSLHAHAGGSVRILQTAQKDCPPVGVQSSKYKDGDKDIPVILNRRKDDD 180
SSELPLKFSSGTSLHAHAGGSVRILQTAQKDCPPVGVQSSKYKDGDKDIPVILNRRKDDD
Sbjct: 121 SSELPLKFSSGTSLHAHAGGSVRILQTAQKDCPPVGVQSSKYKDGDKDIPVILNRRKDDD 180
Query: 181 KLDLFQSSQAEWIKQYVEQQEEDDYGTWEDDLADEVSSKASRARSYDVIAEEYYAARLEA 240
KLDLFQSSQAEWIKQYVEQQEEDDYGTWEDDL DEVSSKASRARSYDVIAEEYYAARLEA
Sbjct: 181 KLDLFQSSQAEWIKQYVEQQEEDDYGTWEDDLDDEVSSKASRARSYDVIAEEYYAARLEA 240
Query: 241 AKAKEEGDKKRQETAGNTIRKLKQELFAQGLSDDMLASEFEFGRALDNASKDAPTQDQNF 300
AKAKEEGDKKRQE AGNTIRKLKQELFAQGLSDDMLASEFEFGRALDNASKDAP QDQNF
Sbjct: 241 AKAKEEGDKKRQEIAGNTIRKLKQELFAQGLSDDMLASEFEFGRALDNASKDAPMQDQNF 300
Query: 301 GVNQTDDVGSSLDLSVHRNESVDIDGRDRSTSKEISVDLMSSQEKESTVDVDGRDCSTPK 360
GVNQTDDVGSSLDLS RNES DIDG+DRSTSKE+SVDLMSSQEKESTVDVDGRDCSTPK
Sbjct: 301 GVNQTDDVGSSLDLSAQRNESFDIDGKDRSTSKELSVDLMSSQEKESTVDVDGRDCSTPK 360
Query: 361 EISVGLISSQGKNDCEELEDVEIGNFFVEDVETNSNVAQELLELKKREKLRELSSGKNLE 420
EISVGLISSQGKNDCEELEDVEIGNFFVEDVETNS+VAQELLELKK+EKLRELSSGKNLE
Sbjct: 361 EISVGLISSQGKNDCEELEDVEIGNFFVEDVETNSDVAQELLELKKKEKLRELSSGKNLE 420
Query: 421 KLDGIWKKGDPLKIPKAVLHQLCQKAGWDAPKFNKIHRKENVFFYAVNILRKASGRGKNR 480
KLDGIWKKGDPLKIPKAVLHQLCQKAGWDAPKFNKIHRKENVFFYAVNILRKASGRGKNR
Sbjct: 421 KLDGIWKKGDPLKIPKAVLHQLCQKAGWDAPKFNKIHRKENVFFYAVNILRKASGRGKNR 480
Query: 481 KAGGLITLQLPDADEIFDSAEDAQNKVAAFALYHLFPDVPVHLALIEPYATLVMQWKAGE 540
KAGGLITLQLPDADEIFDSAEDAQNKVAAF+LYHLFPDVPVHLALIEPYATLVMQWKAGE
Sbjct: 481 KAGGLITLQLPDADEIFDSAEDAQNKVAAFSLYHLFPDVPVHLALIEPYATLVMQWKAGE 540
Query: 541 STSKVDDNEKDRRASFVDSLLDASSSDSASKTFVGKIEQLHIEDDKKPTVSDLDSHSFVE 600
STSKVDDNEKDRRASFVDSLLDASSSDSASKTFVGKIEQLHIEDDKKPTVSDLDSHSFVE
Sbjct: 541 STSKVDDNEKDRRASFVDSLLDASSSDSASKTFVGKIEQLHIEDDKKPTVSDLDSHSFVE 600
Query: 601 RLNSNTQNESSHLRLEHENKKKTKRYQDMLKNRAALPIASLRGDILRLLKENSVLVVCGD 660
RLNSNTQNESS LRLEHENKKKTK+YQDMLKNRAALPIASLRGDILRLLKENSVLVVCGD
Sbjct: 601 RLNSNTQNESSRLRLEHENKKKTKQYQDMLKNRAALPIASLRGDILRLLKENSVLVVCGD 660
Query: 661 TGSGKTTQVPQFILDDMIESGHGGLCNIVCTQPRRIAAISVAERVSDERCEPSPGTNGSL 720
TGSGKTTQVPQFILDD IESGHGGLCNIVCTQPRRIAAISVAERVSDERCEPSPGTNGSL
Sbjct: 661 TGSGKTTQVPQFILDDKIESGHGGLCNIVCTQPRRIAAISVAERVSDERCEPSPGTNGSL 720
Query: 721 VGYHVRLDSARNANTKLLFCTTGILLRQIVGDGNLTGITHIIVDEVHERSLLDDFLLVVL 780
VGYHVRLDSARNANTKLLFCTTGILLRQIVGDGNLTGITHIIVDEVHERSLLDDFLLVVL
Sbjct: 721 VGYHVRLDSARNANTKLLFCTTGILLRQIVGDGNLTGITHIIVDEVHERSLLDDFLLVVL 780
Query: 781 KNLVEKRSAESSSPLKVILMSATVDSNLFSGYFGNCPVITAEGRMHPVTTYFLEDIYEST 840
K+L+EKRSAESSSPLKVILMSATVDSNLFSGYFGNCPVITAEGRMHPVTTYFLEDIYEST
Sbjct: 781 KSLIEKRSAESSSPLKVILMSATVDSNLFSGYFGNCPVITAEGRMHPVTTYFLEDIYEST 840
Query: 841 GYLLASDSPAAIRYEVSSGKKNAPVNYRRGKKNLILSAWGDEALLSEACTNPYYNLDCYQ 900
GYLLASDSPAAIRYEVSSGKKNAPVNYRRGKKNLILSAWGDEALLSEACTNPYYNLDCYQ
Sbjct: 841 GYLLASDSPAAIRYEVSSGKKNAPVNYRRGKKNLILSAWGDEALLSEACTNPYYNLDCYQ 900
Query: 901 SYSELTQKNLERLNEDAIDYDLLEDLVIHVDKTFDEGAILVFLPGVSEINLLYDRLAASY 960
SYSELTQKNLERLNEDAIDYDLLEDLVIHVDKTFDEGAILVFLPGVSEINLLYDRLAASY
Sbjct: 901 SYSELTQKNLERLNEDAIDYDLLEDLVIHVDKTFDEGAILVFLPGVSEINLLYDRLAASY 960
Query: 961 QFGGQASDWILPLHSSIASTDQKKVFLRPPHGIRKVIIATNIAETSITIDDVIYVIDCGR 1020
QFGGQASDWILPLHSSIASTDQKKVFLRPPHGIRKVIIATNIAETSITIDDVIYVIDCGR
Sbjct: 961 QFGGQASDWILPLHSSIASTDQKKVFLRPPHGIRKVIIATNIAETSITIDDVIYVIDCGR 1020
Query: 1021 HKEKRYNPQKKLSSMVEDWISQANARQRRGRAGRVRPGNCFCLYTRHRYEKFMRPFQVPE 1080
HKEKRYNPQKKLSSMVEDWISQANARQRRGRAGRVRPGNCFCLYTRHRYEK MRPFQVPE
Sbjct: 1021 HKEKRYNPQKKLSSMVEDWISQANARQRRGRAGRVRPGNCFCLYTRHRYEKLMRPFQVPE 1080
Query: 1081 MLRMPLVELCLQIKLLSLGYIRPFLSKALEPPREEAMTSAISLLYEVGALEGDEELTPLG 1140
MLRMPLVELCLQIKLLSLGYIRPFLSKALEPPREEAMTSAISLLYEVGALEGDEELTPLG
Sbjct: 1081 MLRMPLVELCLQIKLLSLGYIRPFLSKALEPPREEAMTSAISLLYEVGALEGDEELTPLG 1140
Query: 1141 QHLAKLPVDVLIGKMMLYGGIFGCLSSILSISAFLSYKSPFIYPKDERQNVERAKLALLS 1200
QHLAKLPVDVLIGKMMLYGGIFGCLSSILSISAFLSYKSPFIYPKDERQNVERAKLALLS
Sbjct: 1141 QHLAKLPVDVLIGKMMLYGGIFGCLSSILSISAFLSYKSPFIYPKDERQNVERAKLALLS 1200
Query: 1201 DERYGLGESCSNDKQSDHLIMATAYKKWEILLHQKGPKAAQEFCKSYFLSSSVMYMIRDM 1260
DERYGLGESCSNDKQSDHLIMATAYKKWEILLHQKGPKAAQEFCKSYFLSSSVMYMIRDM
Sbjct: 1201 DERYGLGESCSNDKQSDHLIMATAYKKWEILLHQKGPKAAQEFCKSYFLSSSVMYMIRDM 1260
Query: 1261 RVQFGTLLADIGLVDLPKKSRFDRVRKEDLNGWFSDSSQPFNINSDHPSIVKAVLCAGLY 1320
RVQFGTLLADIGL+DLPKKSRFDRVRKEDLNGWFSDSSQPFNINSDHPSIVKAVLCAGLY
Sbjct: 1261 RVQFGTLLADIGLIDLPKKSRFDRVRKEDLNGWFSDSSQPFNINSDHPSIVKAVLCAGLY 1320
Query: 1321 PNIAAGVAGITEAALSSLGRSSGPATTARPSLYDGRREVYIHPSSVNSNLKTFQYPFHVF 1380
PNIAAGVAGITEAALSSLGRSSGPATTARPSLYDGRREVYIHPSSVNSNLKTFQYPFHVF
Sbjct: 1321 PNIAAGVAGITEAALSSLGRSSGPATTARPSLYDGRREVYIHPSSVNSNLKTFQYPFHVF 1380
Query: 1381 LEKVETNKVFIRDTSVVSPYSILLFGGSINVQHQSGIVIIDGWLKLTAPAQIAVLFKELR 1440
LEKVETNKVFIRDTSVVSPYSILLFGGSINVQHQSGIVIIDGWLKLTAPAQIAVLFKELR
Sbjct: 1381 LEKVETNKVFIRDTSVVSPYSILLFGGSINVQHQSGIVIIDGWLKLTAPAQIAVLFKELR 1440
Query: 1441 LTLHSILKELIRRPETSIIINNEVLKSIVRLLLEEDKPLT 1481
LTLHSILKELIRRPETSIIINNEVLKSIVRLLLEE KPLT
Sbjct: 1441 LTLHSILKELIRRPETSIIINNEVLKSIVRLLLEEGKPLT 1479
BLAST of CmoCh16G004250 vs. ExPASy TrEMBL
Match:
A0A1S3C1V6 (DExH-box ATP-dependent RNA helicase DExH7, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496088 PE=4 SV=1)
HSP 1 Score: 2553.9 bits (6618), Expect = 0.0e+00
Identity = 1323/1484 (89.15%), Postives = 1389/1484 (93.60%), Query Frame = 0
Query: 1 MAPRKKQQQQPKQKQNNRKSNPTSSTSDSRSSTSGAKLHISAENETRLRRLLLSSGRSTP 60
MAPRKKQQQQPKQKQNNRKSN T STSD+R S+SG KL+ISAENETRLRRLLLSS RSTP
Sbjct: 1 MAPRKKQQQQPKQKQNNRKSNSTPSTSDARPSSSGPKLNISAENETRLRRLLLSSARSTP 60
Query: 61 SVTHADDSLSKVQKVKKLQSVYEKLSCEGFTNDQIELALSTIGDSATFEAALDWLCLNLP 120
SVT ADDSLSKVQKVKKL++VYEKLSCEGFTNDQIELALS IGD ATFEAALDWLCLNLP
Sbjct: 61 SVTPADDSLSKVQKVKKLKAVYEKLSCEGFTNDQIELALSAIGDGATFEAALDWLCLNLP 120
Query: 121 SSELPLKFSSGTSLHAHAGGSVRILQTAQKDCPPVGVQSSKYKDGDKDIPVILNRRKDDD 180
SSELPLKFSSGTSLH H GGSVRILQTAQK CP +GVQSSK +DGD+D+PVIL+RRKDDD
Sbjct: 121 SSELPLKFSSGTSLHTHVGGSVRILQTAQKHCPSMGVQSSKDEDGDRDVPVILSRRKDDD 180
Query: 181 KLDLFQSSQAEWIKQYVEQQEEDDYGTWEDDLADEVSSK-ASRARSYDVIAEEYYAARLE 240
KLD FQSSQAEWIKQYVEQQEEDDYGTWED++ADE SS+ AS+ARSYDVIAEEYYAARL+
Sbjct: 181 KLDRFQSSQAEWIKQYVEQQEEDDYGTWEDNMADEGSSREASQARSYDVIAEEYYAARLD 240
Query: 241 AAKAKEEGDKKRQETAGNTIRKLKQELFAQGLSDDMLASEFEFGRALDNASKD---APTQ 300
AAKAKEEGDKKRQETAGN IRKLKQEL AQGLS DMLASEFE+GRALDN KD + Q
Sbjct: 241 AAKAKEEGDKKRQETAGNIIRKLKQELLAQGLSVDMLASEFEYGRALDNTLKDEAMSSVQ 300
Query: 301 DQNFGVNQTDDVGSSLDLSVHRNESVDIDGRDRSTSKEISVDLMSSQEKESTVDVDGRDC 360
D N GVNQ ++ SSLD+SVHRNESV++D RD S SKE+SVDLMSSQE ESTVDVDGR C
Sbjct: 301 DGNVGVNQA-NMRSSLDISVHRNESVNVDERDWSKSKELSVDLMSSQEIESTVDVDGRAC 360
Query: 361 STPKEISVGLISSQGKNDCEELEDVEIGNFFVEDVETNSNVAQELLELKKREKLRELSSG 420
S PKE SV L+SSQGKND EE EDVEIGNFF+EDVETN +VAQELL+LKK+EK++ELSSG
Sbjct: 361 SAPKETSVDLLSSQGKNDSEEPEDVEIGNFFLEDVETNLDVAQELLKLKKKEKMKELSSG 420
Query: 421 KNLEKLDGIWKKGDPLKIPKAVLHQLCQKAGWDAPKFNKIHRKENVFFYAVNILRKASGR 480
KNLEKLDGIWKKGDPLKIPKAVLHQLCQK GWDAPKFNKIHRKEN FFYAV++LRKASGR
Sbjct: 421 KNLEKLDGIWKKGDPLKIPKAVLHQLCQKEGWDAPKFNKIHRKENGFFYAVSVLRKASGR 480
Query: 481 GKNRKAGGLITLQLPDADEIFDSAEDAQNKVAAFALYHLFPDVPVHLALIEPYATLVMQW 540
GKNRKAGGLITLQ P+ DEIF+SAEDAQNKVAAFAL HLFPD+P H+ALIEPYA+LVMQW
Sbjct: 481 GKNRKAGGLITLQFPNEDEIFESAEDAQNKVAAFALCHLFPDLPFHVALIEPYASLVMQW 540
Query: 541 KAGESTSKVDDNEKDRRASFVDSLLDASSSDSASKTFVGKIEQLHIEDDKKPTVSDLDSH 600
KAGES SKVDDNEKDRRASFVDSLLDAS+ SASKT VGKIEQL+IEDDKKP DL+SH
Sbjct: 541 KAGESISKVDDNEKDRRASFVDSLLDASNIGSASKTLVGKIEQLNIEDDKKPRALDLNSH 600
Query: 601 SFVERLNSNTQNESSHLRLEHENKKKTKRYQDMLKNRAALPIASLRGDILRLLKENSVLV 660
SF E+L+ NTQNESS LRLEHENK +TK+YQ+MLKNRA LPIASLRGDILRLLKEN+VLV
Sbjct: 601 SFGEKLDYNTQNESSRLRLEHENKMRTKKYQEMLKNRAGLPIASLRGDILRLLKENNVLV 660
Query: 661 VCGDTGSGKTTQVPQFILDDMIESGHGGLCNIVCTQPRRIAAISVAERVSDERCEPSPGT 720
VCGDTGSGKTTQVPQFILD+MIESG GGLCNIVCTQPRRIAAISVAERVSDERCEP+PG+
Sbjct: 661 VCGDTGSGKTTQVPQFILDEMIESGCGGLCNIVCTQPRRIAAISVAERVSDERCEPAPGS 720
Query: 721 NGSLVGYHVRLDSARNANTKLLFCTTGILLRQIVGDGNLTGITHIIVDEVHERSLLDDFL 780
NGSLVGYHVRLD+ARN NTKLLFCTTGILLRQIVGD LTGITHIIVDEVHERSLL DFL
Sbjct: 721 NGSLVGYHVRLDNARNENTKLLFCTTGILLRQIVGDETLTGITHIIVDEVHERSLLGDFL 780
Query: 781 LVVLKNLVEKRSAESSSPLKVILMSATVDSNLFSGYFGNCPVITAEGRMHPVTTYFLEDI 840
LVVLKNL+EKRSAESSSPLKVILMSATVDSNLFSGYFGNCPVITAEGR+HPVTTYFLEDI
Sbjct: 781 LVVLKNLIEKRSAESSSPLKVILMSATVDSNLFSGYFGNCPVITAEGRVHPVTTYFLEDI 840
Query: 841 YESTGYLLASDSPAAIRYEVSSGKKNAPVNYRRGKKNLILSAWGDEALLSEACTNPYYNL 900
YESTGY LASDSPAAIRYEVSSGKK+APVNYRRGKKNLILS WGD+ LLSEACTNPYYN
Sbjct: 841 YESTGYHLASDSPAAIRYEVSSGKKSAPVNYRRGKKNLILSGWGDDVLLSEACTNPYYNS 900
Query: 901 DCYQSYSELTQKNLERLNEDAIDYDLLEDLVIHVDKTFDEGAILVFLPGVSEINLLYDRL 960
DCYQSYSELT KNLERLNE IDYDLLEDLVIHVDKTFDEGAILVFLPGVSEI+LLYDRL
Sbjct: 901 DCYQSYSELTHKNLERLNEHVIDYDLLEDLVIHVDKTFDEGAILVFLPGVSEIHLLYDRL 960
Query: 961 AASYQFGGQASDWILPLHSSIASTDQKKVFLRPPHGIRKVIIATNIAETSITIDDVIYVI 1020
AASYQFGGQASDWILPLHSSIASTDQKKVFLRPP+GIRKVIIATNIAETSITIDDV+YVI
Sbjct: 961 AASYQFGGQASDWILPLHSSIASTDQKKVFLRPPYGIRKVIIATNIAETSITIDDVVYVI 1020
Query: 1021 DCGRHKEKRYNPQKKLSSMVEDWISQANARQRRGRAGRVRPGNCFCLYTRHRYEKFMRPF 1080
D GRHKE RYNPQKKLSSMVEDWISQANARQRRGRAGRVRPG CFCLYT HRYEK MRPF
Sbjct: 1021 DSGRHKENRYNPQKKLSSMVEDWISQANARQRRGRAGRVRPGTCFCLYTHHRYEKLMRPF 1080
Query: 1081 QVPEMLRMPLVELCLQIKLLSLGYIRPFLSKALEPPREEAMTSAISLLYEVGALEGDEEL 1140
QVPEMLRMPLVELCLQIKLLSLGYIRPFLSKALEPPREEAM SAISLLYEVGALEG+EEL
Sbjct: 1081 QVPEMLRMPLVELCLQIKLLSLGYIRPFLSKALEPPREEAMASAISLLYEVGALEGNEEL 1140
Query: 1141 TPLGQHLAKLPVDVLIGKMMLYGGIFGCLSSILSISAFLSYKSPFIYPKDERQNVERAKL 1200
TPLGQHLAKLPVDVLIGKMMLYGGIFGCLSSILSISAFLSYKSPFIYPKDERQNVERAKL
Sbjct: 1141 TPLGQHLAKLPVDVLIGKMMLYGGIFGCLSSILSISAFLSYKSPFIYPKDERQNVERAKL 1200
Query: 1201 ALLSDERYGLGESCSNDKQSDHLIMATAYKKWEILLHQKGPKAAQEFCKSYFLSSSVMYM 1260
ALLSDE GLGESC NDKQSDHLIM AYKKWE +LHQKG KAAQ+FCKSYFLSSSVM+M
Sbjct: 1201 ALLSDEGNGLGESCGNDKQSDHLIMVNAYKKWEKVLHQKGAKAAQQFCKSYFLSSSVMHM 1260
Query: 1261 IRDMRVQFGTLLADIGLVDLPKKSRFDRVRKEDLNGWFSDSSQPFNINSDHPSIVKAVLC 1320
IRDMRVQFGTLLADIGLVDLPK+SRFDR KEDL+ WFSDSSQPFN+ SDHPSIVKAVLC
Sbjct: 1261 IRDMRVQFGTLLADIGLVDLPKRSRFDRTTKEDLDTWFSDSSQPFNVYSDHPSIVKAVLC 1320
Query: 1321 AGLYPNIAAGVAGITEAALSSLGRSSGPATTARPSLYDGRREVYIHPSSVNSNLKTFQYP 1380
AGLYPNIAAG GITEAAL+SLGRSSGPATT RP LYDGRREVYIHPSSVNSNLK FQYP
Sbjct: 1321 AGLYPNIAAGEEGITEAALNSLGRSSGPATTVRPVLYDGRREVYIHPSSVNSNLKAFQYP 1380
Query: 1381 FHVFLEKVETNKVFIRDTSVVSPYSILLFGGSINVQHQSGIVIIDGWLKLTAPAQIAVLF 1440
FHVFLEKVETNKVFIRDTSVVSPYSILLFGGSIN+QHQSGIVIIDGWLKLTAPAQIAVLF
Sbjct: 1381 FHVFLEKVETNKVFIRDTSVVSPYSILLFGGSINIQHQSGIVIIDGWLKLTAPAQIAVLF 1440
Query: 1441 KELRLTLHSILKELIRRPETSIIINNEVLKSIVRLLLEEDKPLT 1481
KELRLTLHSILKELIRRPETSIII NEVLKSIVRLLLEEDKPLT
Sbjct: 1441 KELRLTLHSILKELIRRPETSIIIKNEVLKSIVRLLLEEDKPLT 1483
BLAST of CmoCh16G004250 vs. ExPASy TrEMBL
Match:
A0A6J1C3N5 (DExH-box ATP-dependent RNA helicase DExH7, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC111008194 PE=4 SV=1)
HSP 1 Score: 2479.9 bits (6426), Expect = 0.0e+00
Identity = 1300/1485 (87.54%), Postives = 1353/1485 (91.11%), Query Frame = 0
Query: 1 MAPRKKQQQQPKQKQNNRKSNPTSSTSDSRSSTSGAKLHISAENETRLRRLLLSSGRSTP 60
MAPRKK QQQPKQK NNRKSNP SST DSR S+SG KLHISAENETRLRRLLLSSGRSTP
Sbjct: 1 MAPRKK-QQQPKQKHNNRKSNPNSSTYDSRPSSSGPKLHISAENETRLRRLLLSSGRSTP 60
Query: 61 SVTHADDSLSKVQKVKKLQSVYEKLSCEGFTNDQIELALSTIGDSATFEAALDWLCLNLP 120
S ADDSLSKVQKVKKL++VYEKLSCEGFTNDQIELALS IGD ATFEAALDWLCLNLP
Sbjct: 61 SAIPADDSLSKVQKVKKLKTVYEKLSCEGFTNDQIELALSAIGDGATFEAALDWLCLNLP 120
Query: 121 SSELPLKFSSGTSLHAHAGGSVRILQTAQKDCPPVGVQSSKYKDGDKDIPVILNRRKDDD 180
SSELPLKFSSGTSLH H GGS+RILQTAQKDCP VGVQSSKYKDG +D VI NRRKDDD
Sbjct: 121 SSELPLKFSSGTSLHTHEGGSIRILQTAQKDCPSVGVQSSKYKDGGEDSSVIFNRRKDDD 180
Query: 181 KLDLFQSSQAEWIKQYVEQQEEDDYGTWEDDLADEVSSK-ASRARSYDVIAEEYYAARLE 240
LD FQSSQA+WIKQYVEQQEEDDY TWED++ADEVSSK AS+ARSYDVIA EYYAARLE
Sbjct: 181 TLDFFQSSQAQWIKQYVEQQEEDDYRTWEDEMADEVSSKEASQARSYDVIAGEYYAARLE 240
Query: 241 AAKAKEEGDKKRQETAGNTIRKLKQELFAQGLSDDMLASEFEFGRALDNASKDAPT---Q 300
AAKAKEEGDKKR+ETAGN IRKLKQEL AQGLSDDMLASEFE+GRA DNASKD T Q
Sbjct: 241 AAKAKEEGDKKRKETAGNIIRKLKQELLAQGLSDDMLASEFEYGRAFDNASKDTHTTSMQ 300
Query: 301 DQNFGVNQTDDVGSSLDLSVHRNESVDIDGRDRSTSKEISVDLMSSQEKESTVDVDGRDC 360
FGVNQ+ DV S+D VHRN ESTVDVDGR+
Sbjct: 301 HGIFGVNQSGDVEISVDCPVHRN--------------------------ESTVDVDGREA 360
Query: 361 STPKEISVGLISSQGKNDCEELEDVEIGNFFVEDVETNSNVAQELLELKKREKLRELSSG 420
S+ KEISV L+SSQ KND E+LEDVEIGNF EDVETN VAQELL+L+K+EK+RELSSG
Sbjct: 361 SSSKEISVNLMSSQEKNDSEKLEDVEIGNFLFEDVETNPRVAQELLKLEKKEKMRELSSG 420
Query: 421 KNLEKLDGIWKKGDPLKIPKAVLHQLCQKAGWDAPKFNKIHRKENVFFYAVNILRKASGR 480
KNLEKLDGIWKKGDPLKIPKAVLHQLCQKAGWDAPKFNKIH KEN FFYAVN+LRKASGR
Sbjct: 421 KNLEKLDGIWKKGDPLKIPKAVLHQLCQKAGWDAPKFNKIHGKENNFFYAVNVLRKASGR 480
Query: 481 GKNRKAGGLITLQLPDADEIFDSAEDAQNKVAAFALYHLFPDVPVHLALIEPYATLVMQW 540
GKNRKAGGLITLQLPD DEIF+SAEDAQNKVAAFAL HLFP++PV+LAL+EPYA+LVMQW
Sbjct: 481 GKNRKAGGLITLQLPDEDEIFESAEDAQNKVAAFALCHLFPEIPVNLALMEPYASLVMQW 540
Query: 541 KAGESTSKVDDNEKDRRASFVDSLLDASS-SDSASKTFVGKIEQLHIEDDKKPTVSDLDS 600
KAGEST KVDDNE+DRRASFVDSLLDASS SASKTFVGKIEQ HIEDDKKPTV DLDS
Sbjct: 541 KAGESTRKVDDNEEDRRASFVDSLLDASSVGSSASKTFVGKIEQPHIEDDKKPTVLDLDS 600
Query: 601 HSFVERLNSNTQNESSHLRLEHENKKKTKRYQDMLKNRAALPIASLRGDILRLLKENSVL 660
SF +RLN NTQ ESS LRLEHENK KT++YQ MLKNR ALPIASLRGDILRLLKEN+VL
Sbjct: 601 DSFRKRLNINTQPESSRLRLEHENKMKTQKYQAMLKNRDALPIASLRGDILRLLKENNVL 660
Query: 661 VVCGDTGSGKTTQVPQFILDDMIESGHGGLCNIVCTQPRRIAAISVAERVSDERCEPSPG 720
VVCGDTGSGKTTQVPQFILDDMIESGHGG CNIVCTQPRRIAAISVAERVSDER EPSPG
Sbjct: 661 VVCGDTGSGKTTQVPQFILDDMIESGHGGWCNIVCTQPRRIAAISVAERVSDERSEPSPG 720
Query: 721 TNGSLVGYHVRLDSARNANTKLLFCTTGILLRQIVGDGNLTGITHIIVDEVHERSLLDDF 780
TNGSLVGYHVRLDSARN +TKLLFCTTGILLRQIVGD LTGITHIIVDEVHERSLL DF
Sbjct: 721 TNGSLVGYHVRLDSARNEHTKLLFCTTGILLRQIVGDETLTGITHIIVDEVHERSLLGDF 780
Query: 781 LLVVLKNLVEKRSAESSSPLKVILMSATVDSNLFSGYFGNCPVITAEGRMHPVTTYFLED 840
LLVVLKNL+EKRS +SSSPLKVILMSATVDSNLFSGYFGNCPVITAEGRMHPVTTYFLED
Sbjct: 781 LLVVLKNLIEKRSTDSSSPLKVILMSATVDSNLFSGYFGNCPVITAEGRMHPVTTYFLED 840
Query: 841 IYESTGYLLASDSPAAIRYEVSSGKKNAPVNYRRGKKNLILSAWGDEALLSEACTNPYYN 900
IYESTGY LASDS +AIRYE+SSGKK APVN RRGKKNLILSAWGD+ALLSEACTNPYY
Sbjct: 841 IYESTGYHLASDSASAIRYEISSGKKGAPVNDRRGKKNLILSAWGDDALLSEACTNPYYI 900
Query: 901 LDCYQSYSELTQKNLERLNEDAIDYDLLEDLVIHVDKTFDEGAILVFLPGVSEINLLYDR 960
D YQSYSE TQKNLERLNE IDYDLLEDLVIHVDKTFDEGAILVFLPGVSEI+LLYDR
Sbjct: 901 SDFYQSYSEETQKNLERLNEHVIDYDLLEDLVIHVDKTFDEGAILVFLPGVSEIHLLYDR 960
Query: 961 LAASYQFGGQASDWILPLHSSIASTDQKKVFLRPPHGIRKVIIATNIAETSITIDDVIYV 1020
LAASYQFGGQASDWILPLHSSIASTDQKKVFLRPP+GIRKVIIATNIAETSITIDDV+YV
Sbjct: 961 LAASYQFGGQASDWILPLHSSIASTDQKKVFLRPPYGIRKVIIATNIAETSITIDDVVYV 1020
Query: 1021 IDCGRHKEKRYNPQKKLSSMVEDWISQANARQRRGRAGRVRPGNCFCLYTRHRYEKFMRP 1080
IDCGRHKE RYNPQKKLSSMVEDWISQANARQRRGRAGRVRPG CFCLYTRHRYEK MRP
Sbjct: 1021 IDCGRHKENRYNPQKKLSSMVEDWISQANARQRRGRAGRVRPGTCFCLYTRHRYEKLMRP 1080
Query: 1081 FQVPEMLRMPLVELCLQIKLLSLGYIRPFLSKALEPPREEAMTSAISLLYEVGALEGDEE 1140
FQVPEMLRMPLVELCLQIKLLSLGYIRPFLSKALEPPREEAM SAISLLYEVGALEG+EE
Sbjct: 1081 FQVPEMLRMPLVELCLQIKLLSLGYIRPFLSKALEPPREEAMASAISLLYEVGALEGNEE 1140
Query: 1141 LTPLGQHLAKLPVDVLIGKMMLYGGIFGCLSSILSISAFLSYKSPFIYPKDERQNVERAK 1200
LTPLGQHLAKLPVDVLIGKMMLYGGIFGCLSSILSISAFLSYKSPFIYPKDERQNVERAK
Sbjct: 1141 LTPLGQHLAKLPVDVLIGKMMLYGGIFGCLSSILSISAFLSYKSPFIYPKDERQNVERAK 1200
Query: 1201 LALLSDERYGLGESCSNDKQSDHLIMATAYKKWEILLHQKGPKAAQEFCKSYFLSSSVMY 1260
LALLSDE G G+SC NDKQSDHLIM TAYKKWE +LHQKG KAA +FCKSYFLSSSVMY
Sbjct: 1201 LALLSDEVNGSGDSCGNDKQSDHLIMVTAYKKWEKILHQKGSKAAVQFCKSYFLSSSVMY 1260
Query: 1261 MIRDMRVQFGTLLADIGLVDLPKKSRFDRVRKEDLNGWFSDSSQPFNINSDHPSIVKAVL 1320
MIRDMRVQFGTLLADIGLVDLPKKS FDR RKEDL+GWFSDSSQPFN+NSDHPSIVKAVL
Sbjct: 1261 MIRDMRVQFGTLLADIGLVDLPKKSSFDRKRKEDLDGWFSDSSQPFNVNSDHPSIVKAVL 1320
Query: 1321 CAGLYPNIAAGVAGITEAALSSLGRSSGPATTARPSLYDGRREVYIHPSSVNSNLKTFQY 1380
CAGLYPNIAAG GITEAALSSLGRSSG ATTARP LYDGRREV+IHPSSVNSNLK FQY
Sbjct: 1321 CAGLYPNIAAGEEGITEAALSSLGRSSGSATTARPVLYDGRREVHIHPSSVNSNLKAFQY 1380
Query: 1381 PFHVFLEKVETNKVFIRDTSVVSPYSILLFGGSINVQHQSGIVIIDGWLKLTAPAQIAVL 1440
PF FLEKVETNKVFIRD +VVSPYSILLFGGSIN+QHQSGIVIIDGWLKLTAPAQIAVL
Sbjct: 1381 PFLTFLEKVETNKVFIRDATVVSPYSILLFGGSINIQHQSGIVIIDGWLKLTAPAQIAVL 1440
Query: 1441 FKELRLTLHSILKELIRRPETSIIINNEVLKSIVRLLLEEDKPLT 1481
FKELRLTLHSILK+LIRRPETSII+NN VLKSIVRLLLEEDKPLT
Sbjct: 1441 FKELRLTLHSILKDLIRRPETSIIVNNAVLKSIVRLLLEEDKPLT 1458
BLAST of CmoCh16G004250 vs. ExPASy TrEMBL
Match:
A0A1S4E0Z2 (DExH-box ATP-dependent RNA helicase DExH7, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496088 PE=4 SV=1)
HSP 1 Score: 2305.0 bits (5972), Expect = 0.0e+00
Identity = 1186/1330 (89.17%), Postives = 1247/1330 (93.76%), Query Frame = 0
Query: 155 VGVQSSKYKDGDKDIPVILNRRKDDDKLDLFQSSQAEWIKQYVEQQEEDDYGTWEDDLAD 214
+GVQSSK +DGD+D+PVIL+RRKDDDKLD FQSSQAEWIKQYVEQQEEDDYGTWED++AD
Sbjct: 1 MGVQSSKDEDGDRDVPVILSRRKDDDKLDRFQSSQAEWIKQYVEQQEEDDYGTWEDNMAD 60
Query: 215 EVSSK-ASRARSYDVIAEEYYAARLEAAKAKEEGDKKRQETAGNTIRKLKQELFAQGLSD 274
E SS+ AS+ARSYDVIAEEYYAARL+AAKAKEEGDKKRQETAGN IRKLKQEL AQGLS
Sbjct: 61 EGSSREASQARSYDVIAEEYYAARLDAAKAKEEGDKKRQETAGNIIRKLKQELLAQGLSV 120
Query: 275 DMLASEFEFGRALDNASKD---APTQDQNFGVNQTDDVGSSLDLSVHRNESVDIDGRDRS 334
DMLASEFE+GRALDN KD + QD N GVNQ ++ SSLD+SVHRNESV++D RD S
Sbjct: 121 DMLASEFEYGRALDNTLKDEAMSSVQDGNVGVNQA-NMRSSLDISVHRNESVNVDERDWS 180
Query: 335 TSKEISVDLMSSQEKESTVDVDGRDCSTPKEISVGLISSQGKNDCEELEDVEIGNFFVED 394
SKE+SVDLMSSQE ESTVDVDGR CS PKE SV L+SSQGKND EE EDVEIGNFF+ED
Sbjct: 181 KSKELSVDLMSSQEIESTVDVDGRACSAPKETSVDLLSSQGKNDSEEPEDVEIGNFFLED 240
Query: 395 VETNSNVAQELLELKKREKLRELSSGKNLEKLDGIWKKGDPLKIPKAVLHQLCQKAGWDA 454
VETN +VAQELL+LKK+EK++ELSSGKNLEKLDGIWKKGDPLKIPKAVLHQLCQK GWDA
Sbjct: 241 VETNLDVAQELLKLKKKEKMKELSSGKNLEKLDGIWKKGDPLKIPKAVLHQLCQKEGWDA 300
Query: 455 PKFNKIHRKENVFFYAVNILRKASGRGKNRKAGGLITLQLPDADEIFDSAEDAQNKVAAF 514
PKFNKIHRKEN FFYAV++LRKASGRGKNRKAGGLITLQ P+ DEIF+SAEDAQNKVAAF
Sbjct: 301 PKFNKIHRKENGFFYAVSVLRKASGRGKNRKAGGLITLQFPNEDEIFESAEDAQNKVAAF 360
Query: 515 ALYHLFPDVPVHLALIEPYATLVMQWKAGESTSKVDDNEKDRRASFVDSLLDASSSDSAS 574
AL HLFPD+P H+ALIEPYA+LVMQWKAGES SKVDDNEKDRRASFVDSLLDAS+ SAS
Sbjct: 361 ALCHLFPDLPFHVALIEPYASLVMQWKAGESISKVDDNEKDRRASFVDSLLDASNIGSAS 420
Query: 575 KTFVGKIEQLHIEDDKKPTVSDLDSHSFVERLNSNTQNESSHLRLEHENKKKTKRYQDML 634
KT VGKIEQL+IEDDKKP DL+SHSF E+L+ NTQNESS LRLEHENK +TK+YQ+ML
Sbjct: 421 KTLVGKIEQLNIEDDKKPRALDLNSHSFGEKLDYNTQNESSRLRLEHENKMRTKKYQEML 480
Query: 635 KNRAALPIASLRGDILRLLKENSVLVVCGDTGSGKTTQVPQFILDDMIESGHGGLCNIVC 694
KNRA LPIASLRGDILRLLKEN+VLVVCGDTGSGKTTQVPQFILD+MIESG GGLCNIVC
Sbjct: 481 KNRAGLPIASLRGDILRLLKENNVLVVCGDTGSGKTTQVPQFILDEMIESGCGGLCNIVC 540
Query: 695 TQPRRIAAISVAERVSDERCEPSPGTNGSLVGYHVRLDSARNANTKLLFCTTGILLRQIV 754
TQPRRIAAISVAERVSDERCEP+PG+NGSLVGYHVRLD+ARN NTKLLFCTTGILLRQIV
Sbjct: 541 TQPRRIAAISVAERVSDERCEPAPGSNGSLVGYHVRLDNARNENTKLLFCTTGILLRQIV 600
Query: 755 GDGNLTGITHIIVDEVHERSLLDDFLLVVLKNLVEKRSAESSSPLKVILMSATVDSNLFS 814
GD LTGITHIIVDEVHERSLL DFLLVVLKNL+EKRSAESSSPLKVILMSATVDSNLFS
Sbjct: 601 GDETLTGITHIIVDEVHERSLLGDFLLVVLKNLIEKRSAESSSPLKVILMSATVDSNLFS 660
Query: 815 GYFGNCPVITAEGRMHPVTTYFLEDIYESTGYLLASDSPAAIRYEVSSGKKNAPVNYRRG 874
GYFGNCPVITAEGR+HPVTTYFLEDIYESTGY LASDSPAAIRYEVSSGKK+APVNYRRG
Sbjct: 661 GYFGNCPVITAEGRVHPVTTYFLEDIYESTGYHLASDSPAAIRYEVSSGKKSAPVNYRRG 720
Query: 875 KKNLILSAWGDEALLSEACTNPYYNLDCYQSYSELTQKNLERLNEDAIDYDLLEDLVIHV 934
KKNLILS WGD+ LLSEACTNPYYN DCYQSYSELT KNLERLNE IDYDLLEDLVIHV
Sbjct: 721 KKNLILSGWGDDVLLSEACTNPYYNSDCYQSYSELTHKNLERLNEHVIDYDLLEDLVIHV 780
Query: 935 DKTFDEGAILVFLPGVSEINLLYDRLAASYQFGGQASDWILPLHSSIASTDQKKVFLRPP 994
DKTFDEGAILVFLPGVSEI+LLYDRLAASYQFGGQASDWILPLHSSIASTDQKKVFLRPP
Sbjct: 781 DKTFDEGAILVFLPGVSEIHLLYDRLAASYQFGGQASDWILPLHSSIASTDQKKVFLRPP 840
Query: 995 HGIRKVIIATNIAETSITIDDVIYVIDCGRHKEKRYNPQKKLSSMVEDWISQANARQRRG 1054
+GIRKVIIATNIAETSITIDDV+YVID GRHKE RYNPQKKLSSMVEDWISQANARQRRG
Sbjct: 841 YGIRKVIIATNIAETSITIDDVVYVIDSGRHKENRYNPQKKLSSMVEDWISQANARQRRG 900
Query: 1055 RAGRVRPGNCFCLYTRHRYEKFMRPFQVPEMLRMPLVELCLQIKLLSLGYIRPFLSKALE 1114
RAGRVRPG CFCLYT HRYEK MRPFQVPEMLRMPLVELCLQIKLLSLGYIRPFLSKALE
Sbjct: 901 RAGRVRPGTCFCLYTHHRYEKLMRPFQVPEMLRMPLVELCLQIKLLSLGYIRPFLSKALE 960
Query: 1115 PPREEAMTSAISLLYEVGALEGDEELTPLGQHLAKLPVDVLIGKMMLYGGIFGCLSSILS 1174
PPREEAM SAISLLYEVGALEG+EELTPLGQHLAKLPVDVLIGKMMLYGGIFGCLSSILS
Sbjct: 961 PPREEAMASAISLLYEVGALEGNEELTPLGQHLAKLPVDVLIGKMMLYGGIFGCLSSILS 1020
Query: 1175 ISAFLSYKSPFIYPKDERQNVERAKLALLSDERYGLGESCSNDKQSDHLIMATAYKKWEI 1234
ISAFLSYKSPFIYPKDERQNVERAKLALLSDE GLGESC NDKQSDHLIM AYKKWE
Sbjct: 1021 ISAFLSYKSPFIYPKDERQNVERAKLALLSDEGNGLGESCGNDKQSDHLIMVNAYKKWEK 1080
Query: 1235 LLHQKGPKAAQEFCKSYFLSSSVMYMIRDMRVQFGTLLADIGLVDLPKKSRFDRVRKEDL 1294
+LHQKG KAAQ+FCKSYFLSSSVM+MIRDMRVQFGTLLADIGLVDLPK+SRFDR KEDL
Sbjct: 1081 VLHQKGAKAAQQFCKSYFLSSSVMHMIRDMRVQFGTLLADIGLVDLPKRSRFDRTTKEDL 1140
Query: 1295 NGWFSDSSQPFNINSDHPSIVKAVLCAGLYPNIAAGVAGITEAALSSLGRSSGPATTARP 1354
+ WFSDSSQPFN+ SDHPSIVKAVLCAGLYPNIAAG GITEAAL+SLGRSSGPATT RP
Sbjct: 1141 DTWFSDSSQPFNVYSDHPSIVKAVLCAGLYPNIAAGEEGITEAALNSLGRSSGPATTVRP 1200
Query: 1355 SLYDGRREVYIHPSSVNSNLKTFQYPFHVFLEKVETNKVFIRDTSVVSPYSILLFGGSIN 1414
LYDGRREVYIHPSSVNSNLK FQYPFHVFLEKVETNKVFIRDTSVVSPYSILLFGGSIN
Sbjct: 1201 VLYDGRREVYIHPSSVNSNLKAFQYPFHVFLEKVETNKVFIRDTSVVSPYSILLFGGSIN 1260
Query: 1415 VQHQSGIVIIDGWLKLTAPAQIAVLFKELRLTLHSILKELIRRPETSIIINNEVLKSIVR 1474
+QHQSGIVIIDGWLKLTAPAQIAVLFKELRLTLHSILKELIRRPETSIII NEVLKSIVR
Sbjct: 1261 IQHQSGIVIIDGWLKLTAPAQIAVLFKELRLTLHSILKELIRRPETSIIIKNEVLKSIVR 1320
Query: 1475 LLLEEDKPLT 1481
LLLEEDKPLT
Sbjct: 1321 LLLEEDKPLT 1329
BLAST of CmoCh16G004250 vs. NCBI nr
Match:
XP_022922708.1 (DExH-box ATP-dependent RNA helicase DExH7, chloroplastic [Cucurbita moschata])
HSP 1 Score: 2875.5 bits (7453), Expect = 0.0e+00
Identity = 1480/1480 (100.00%), Postives = 1480/1480 (100.00%), Query Frame = 0
Query: 1 MAPRKKQQQQPKQKQNNRKSNPTSSTSDSRSSTSGAKLHISAENETRLRRLLLSSGRSTP 60
MAPRKKQQQQPKQKQNNRKSNPTSSTSDSRSSTSGAKLHISAENETRLRRLLLSSGRSTP
Sbjct: 1 MAPRKKQQQQPKQKQNNRKSNPTSSTSDSRSSTSGAKLHISAENETRLRRLLLSSGRSTP 60
Query: 61 SVTHADDSLSKVQKVKKLQSVYEKLSCEGFTNDQIELALSTIGDSATFEAALDWLCLNLP 120
SVTHADDSLSKVQKVKKLQSVYEKLSCEGFTNDQIELALSTIGDSATFEAALDWLCLNLP
Sbjct: 61 SVTHADDSLSKVQKVKKLQSVYEKLSCEGFTNDQIELALSTIGDSATFEAALDWLCLNLP 120
Query: 121 SSELPLKFSSGTSLHAHAGGSVRILQTAQKDCPPVGVQSSKYKDGDKDIPVILNRRKDDD 180
SSELPLKFSSGTSLHAHAGGSVRILQTAQKDCPPVGVQSSKYKDGDKDIPVILNRRKDDD
Sbjct: 121 SSELPLKFSSGTSLHAHAGGSVRILQTAQKDCPPVGVQSSKYKDGDKDIPVILNRRKDDD 180
Query: 181 KLDLFQSSQAEWIKQYVEQQEEDDYGTWEDDLADEVSSKASRARSYDVIAEEYYAARLEA 240
KLDLFQSSQAEWIKQYVEQQEEDDYGTWEDDLADEVSSKASRARSYDVIAEEYYAARLEA
Sbjct: 181 KLDLFQSSQAEWIKQYVEQQEEDDYGTWEDDLADEVSSKASRARSYDVIAEEYYAARLEA 240
Query: 241 AKAKEEGDKKRQETAGNTIRKLKQELFAQGLSDDMLASEFEFGRALDNASKDAPTQDQNF 300
AKAKEEGDKKRQETAGNTIRKLKQELFAQGLSDDMLASEFEFGRALDNASKDAPTQDQNF
Sbjct: 241 AKAKEEGDKKRQETAGNTIRKLKQELFAQGLSDDMLASEFEFGRALDNASKDAPTQDQNF 300
Query: 301 GVNQTDDVGSSLDLSVHRNESVDIDGRDRSTSKEISVDLMSSQEKESTVDVDGRDCSTPK 360
GVNQTDDVGSSLDLSVHRNESVDIDGRDRSTSKEISVDLMSSQEKESTVDVDGRDCSTPK
Sbjct: 301 GVNQTDDVGSSLDLSVHRNESVDIDGRDRSTSKEISVDLMSSQEKESTVDVDGRDCSTPK 360
Query: 361 EISVGLISSQGKNDCEELEDVEIGNFFVEDVETNSNVAQELLELKKREKLRELSSGKNLE 420
EISVGLISSQGKNDCEELEDVEIGNFFVEDVETNSNVAQELLELKKREKLRELSSGKNLE
Sbjct: 361 EISVGLISSQGKNDCEELEDVEIGNFFVEDVETNSNVAQELLELKKREKLRELSSGKNLE 420
Query: 421 KLDGIWKKGDPLKIPKAVLHQLCQKAGWDAPKFNKIHRKENVFFYAVNILRKASGRGKNR 480
KLDGIWKKGDPLKIPKAVLHQLCQKAGWDAPKFNKIHRKENVFFYAVNILRKASGRGKNR
Sbjct: 421 KLDGIWKKGDPLKIPKAVLHQLCQKAGWDAPKFNKIHRKENVFFYAVNILRKASGRGKNR 480
Query: 481 KAGGLITLQLPDADEIFDSAEDAQNKVAAFALYHLFPDVPVHLALIEPYATLVMQWKAGE 540
KAGGLITLQLPDADEIFDSAEDAQNKVAAFALYHLFPDVPVHLALIEPYATLVMQWKAGE
Sbjct: 481 KAGGLITLQLPDADEIFDSAEDAQNKVAAFALYHLFPDVPVHLALIEPYATLVMQWKAGE 540
Query: 541 STSKVDDNEKDRRASFVDSLLDASSSDSASKTFVGKIEQLHIEDDKKPTVSDLDSHSFVE 600
STSKVDDNEKDRRASFVDSLLDASSSDSASKTFVGKIEQLHIEDDKKPTVSDLDSHSFVE
Sbjct: 541 STSKVDDNEKDRRASFVDSLLDASSSDSASKTFVGKIEQLHIEDDKKPTVSDLDSHSFVE 600
Query: 601 RLNSNTQNESSHLRLEHENKKKTKRYQDMLKNRAALPIASLRGDILRLLKENSVLVVCGD 660
RLNSNTQNESSHLRLEHENKKKTKRYQDMLKNRAALPIASLRGDILRLLKENSVLVVCGD
Sbjct: 601 RLNSNTQNESSHLRLEHENKKKTKRYQDMLKNRAALPIASLRGDILRLLKENSVLVVCGD 660
Query: 661 TGSGKTTQVPQFILDDMIESGHGGLCNIVCTQPRRIAAISVAERVSDERCEPSPGTNGSL 720
TGSGKTTQVPQFILDDMIESGHGGLCNIVCTQPRRIAAISVAERVSDERCEPSPGTNGSL
Sbjct: 661 TGSGKTTQVPQFILDDMIESGHGGLCNIVCTQPRRIAAISVAERVSDERCEPSPGTNGSL 720
Query: 721 VGYHVRLDSARNANTKLLFCTTGILLRQIVGDGNLTGITHIIVDEVHERSLLDDFLLVVL 780
VGYHVRLDSARNANTKLLFCTTGILLRQIVGDGNLTGITHIIVDEVHERSLLDDFLLVVL
Sbjct: 721 VGYHVRLDSARNANTKLLFCTTGILLRQIVGDGNLTGITHIIVDEVHERSLLDDFLLVVL 780
Query: 781 KNLVEKRSAESSSPLKVILMSATVDSNLFSGYFGNCPVITAEGRMHPVTTYFLEDIYEST 840
KNLVEKRSAESSSPLKVILMSATVDSNLFSGYFGNCPVITAEGRMHPVTTYFLEDIYEST
Sbjct: 781 KNLVEKRSAESSSPLKVILMSATVDSNLFSGYFGNCPVITAEGRMHPVTTYFLEDIYEST 840
Query: 841 GYLLASDSPAAIRYEVSSGKKNAPVNYRRGKKNLILSAWGDEALLSEACTNPYYNLDCYQ 900
GYLLASDSPAAIRYEVSSGKKNAPVNYRRGKKNLILSAWGDEALLSEACTNPYYNLDCYQ
Sbjct: 841 GYLLASDSPAAIRYEVSSGKKNAPVNYRRGKKNLILSAWGDEALLSEACTNPYYNLDCYQ 900
Query: 901 SYSELTQKNLERLNEDAIDYDLLEDLVIHVDKTFDEGAILVFLPGVSEINLLYDRLAASY 960
SYSELTQKNLERLNEDAIDYDLLEDLVIHVDKTFDEGAILVFLPGVSEINLLYDRLAASY
Sbjct: 901 SYSELTQKNLERLNEDAIDYDLLEDLVIHVDKTFDEGAILVFLPGVSEINLLYDRLAASY 960
Query: 961 QFGGQASDWILPLHSSIASTDQKKVFLRPPHGIRKVIIATNIAETSITIDDVIYVIDCGR 1020
QFGGQASDWILPLHSSIASTDQKKVFLRPPHGIRKVIIATNIAETSITIDDVIYVIDCGR
Sbjct: 961 QFGGQASDWILPLHSSIASTDQKKVFLRPPHGIRKVIIATNIAETSITIDDVIYVIDCGR 1020
Query: 1021 HKEKRYNPQKKLSSMVEDWISQANARQRRGRAGRVRPGNCFCLYTRHRYEKFMRPFQVPE 1080
HKEKRYNPQKKLSSMVEDWISQANARQRRGRAGRVRPGNCFCLYTRHRYEKFMRPFQVPE
Sbjct: 1021 HKEKRYNPQKKLSSMVEDWISQANARQRRGRAGRVRPGNCFCLYTRHRYEKFMRPFQVPE 1080
Query: 1081 MLRMPLVELCLQIKLLSLGYIRPFLSKALEPPREEAMTSAISLLYEVGALEGDEELTPLG 1140
MLRMPLVELCLQIKLLSLGYIRPFLSKALEPPREEAMTSAISLLYEVGALEGDEELTPLG
Sbjct: 1081 MLRMPLVELCLQIKLLSLGYIRPFLSKALEPPREEAMTSAISLLYEVGALEGDEELTPLG 1140
Query: 1141 QHLAKLPVDVLIGKMMLYGGIFGCLSSILSISAFLSYKSPFIYPKDERQNVERAKLALLS 1200
QHLAKLPVDVLIGKMMLYGGIFGCLSSILSISAFLSYKSPFIYPKDERQNVERAKLALLS
Sbjct: 1141 QHLAKLPVDVLIGKMMLYGGIFGCLSSILSISAFLSYKSPFIYPKDERQNVERAKLALLS 1200
Query: 1201 DERYGLGESCSNDKQSDHLIMATAYKKWEILLHQKGPKAAQEFCKSYFLSSSVMYMIRDM 1260
DERYGLGESCSNDKQSDHLIMATAYKKWEILLHQKGPKAAQEFCKSYFLSSSVMYMIRDM
Sbjct: 1201 DERYGLGESCSNDKQSDHLIMATAYKKWEILLHQKGPKAAQEFCKSYFLSSSVMYMIRDM 1260
Query: 1261 RVQFGTLLADIGLVDLPKKSRFDRVRKEDLNGWFSDSSQPFNINSDHPSIVKAVLCAGLY 1320
RVQFGTLLADIGLVDLPKKSRFDRVRKEDLNGWFSDSSQPFNINSDHPSIVKAVLCAGLY
Sbjct: 1261 RVQFGTLLADIGLVDLPKKSRFDRVRKEDLNGWFSDSSQPFNINSDHPSIVKAVLCAGLY 1320
Query: 1321 PNIAAGVAGITEAALSSLGRSSGPATTARPSLYDGRREVYIHPSSVNSNLKTFQYPFHVF 1380
PNIAAGVAGITEAALSSLGRSSGPATTARPSLYDGRREVYIHPSSVNSNLKTFQYPFHVF
Sbjct: 1321 PNIAAGVAGITEAALSSLGRSSGPATTARPSLYDGRREVYIHPSSVNSNLKTFQYPFHVF 1380
Query: 1381 LEKVETNKVFIRDTSVVSPYSILLFGGSINVQHQSGIVIIDGWLKLTAPAQIAVLFKELR 1440
LEKVETNKVFIRDTSVVSPYSILLFGGSINVQHQSGIVIIDGWLKLTAPAQIAVLFKELR
Sbjct: 1381 LEKVETNKVFIRDTSVVSPYSILLFGGSINVQHQSGIVIIDGWLKLTAPAQIAVLFKELR 1440
Query: 1441 LTLHSILKELIRRPETSIIINNEVLKSIVRLLLEEDKPLT 1481
LTLHSILKELIRRPETSIIINNEVLKSIVRLLLEEDKPLT
Sbjct: 1441 LTLHSILKELIRRPETSIIINNEVLKSIVRLLLEEDKPLT 1480
BLAST of CmoCh16G004250 vs. NCBI nr
Match:
XP_023552212.1 (DExH-box ATP-dependent RNA helicase DExH7, chloroplastic [Cucurbita pepo subsp. pepo])
HSP 1 Score: 2852.8 bits (7394), Expect = 0.0e+00
Identity = 1467/1481 (99.05%), Postives = 1476/1481 (99.66%), Query Frame = 0
Query: 1 MAPRKK-QQQQPKQKQNNRKSNPTSSTSDSRSSTSGAKLHISAENETRLRRLLLSSGRST 60
MAPRKK QQQQPKQKQNNRKSNPTSSTSDSRSSTSGAKLHISAENETRLRRLLLSSGRST
Sbjct: 1 MAPRKKQQQQQPKQKQNNRKSNPTSSTSDSRSSTSGAKLHISAENETRLRRLLLSSGRST 60
Query: 61 PSVTHADDSLSKVQKVKKLQSVYEKLSCEGFTNDQIELALSTIGDSATFEAALDWLCLNL 120
PSVTHADDSLSKVQKVKKLQSVYEKLSCEGFTNDQIELALSTIGD ATFEAALDWLCLNL
Sbjct: 61 PSVTHADDSLSKVQKVKKLQSVYEKLSCEGFTNDQIELALSTIGDGATFEAALDWLCLNL 120
Query: 121 PSSELPLKFSSGTSLHAHAGGSVRILQTAQKDCPPVGVQSSKYKDGDKDIPVILNRRKDD 180
PSSELPLKFSSGTSLHAHAGGSVRILQTAQKDCPPVGVQSSKYKDGDKDIPVILNRRKDD
Sbjct: 121 PSSELPLKFSSGTSLHAHAGGSVRILQTAQKDCPPVGVQSSKYKDGDKDIPVILNRRKDD 180
Query: 181 DKLDLFQSSQAEWIKQYVEQQEEDDYGTWEDDLADEVSSKASRARSYDVIAEEYYAARLE 240
DKLDLFQSSQAEWIKQYVEQQEEDDYGTWEDDLADEVSSKASRARSYDVIAEEYYAARLE
Sbjct: 181 DKLDLFQSSQAEWIKQYVEQQEEDDYGTWEDDLADEVSSKASRARSYDVIAEEYYAARLE 240
Query: 241 AAKAKEEGDKKRQETAGNTIRKLKQELFAQGLSDDMLASEFEFGRALDNASKDAPTQDQN 300
AAKAKEEGDKKRQETAGNTIRKLKQELFAQGLSDDMLASEFEFGRALDNASKDAPTQDQN
Sbjct: 241 AAKAKEEGDKKRQETAGNTIRKLKQELFAQGLSDDMLASEFEFGRALDNASKDAPTQDQN 300
Query: 301 FGVNQTDDVGSSLDLSVHRNESVDIDGRDRSTSKEISVDLMSSQEKESTVDVDGRDCSTP 360
FGVNQTDDVGSSLDLSVHRNESVDIDGRDRSTSKEISVDLMSSQEKESTVDVDGRDCSTP
Sbjct: 301 FGVNQTDDVGSSLDLSVHRNESVDIDGRDRSTSKEISVDLMSSQEKESTVDVDGRDCSTP 360
Query: 361 KEISVGLISSQGKNDCEELEDVEIGNFFVEDVETNSNVAQELLELKKREKLRELSSGKNL 420
KEISVGLISSQGKNDCEELEDVEIGNFFVEDVETNS+VAQELLELKK+EKLRELSSGKNL
Sbjct: 361 KEISVGLISSQGKNDCEELEDVEIGNFFVEDVETNSDVAQELLELKKKEKLRELSSGKNL 420
Query: 421 EKLDGIWKKGDPLKIPKAVLHQLCQKAGWDAPKFNKIHRKENVFFYAVNILRKASGRGKN 480
EKLDGIWKKGDPLKIPKAVLHQLCQKAGWDAPKFNKIHRKENVFFYAVNILRKASGRGKN
Sbjct: 421 EKLDGIWKKGDPLKIPKAVLHQLCQKAGWDAPKFNKIHRKENVFFYAVNILRKASGRGKN 480
Query: 481 RKAGGLITLQLPDADEIFDSAEDAQNKVAAFALYHLFPDVPVHLALIEPYATLVMQWKAG 540
RKAGGLITLQLPDADEIFDSAEDAQNKVAAFALYHLFPDVPVHLALIEPYATLVMQWKAG
Sbjct: 481 RKAGGLITLQLPDADEIFDSAEDAQNKVAAFALYHLFPDVPVHLALIEPYATLVMQWKAG 540
Query: 541 ESTSKVDDNEKDRRASFVDSLLDASSSDSASKTFVGKIEQLHIEDDKKPTVSDLDSHSFV 600
ESTSKVDDNEKDRRASFVDSLLDASSSDSASKTFVGKIEQLHIEDDKKPTVSDLDSHSFV
Sbjct: 541 ESTSKVDDNEKDRRASFVDSLLDASSSDSASKTFVGKIEQLHIEDDKKPTVSDLDSHSFV 600
Query: 601 ERLNSNTQNESSHLRLEHENKKKTKRYQDMLKNRAALPIASLRGDILRLLKENSVLVVCG 660
ERLNSNTQNESS LRLEHENKKKTK+YQDMLKNRAALP+ASLRGDILRLLKENSVLVVCG
Sbjct: 601 ERLNSNTQNESSRLRLEHENKKKTKQYQDMLKNRAALPVASLRGDILRLLKENSVLVVCG 660
Query: 661 DTGSGKTTQVPQFILDDMIESGHGGLCNIVCTQPRRIAAISVAERVSDERCEPSPGTNGS 720
DTGSGKTTQVPQFILDDMIESGHGGLCNIVCTQPRRIAAISVAERVSDERCEPSPGTNGS
Sbjct: 661 DTGSGKTTQVPQFILDDMIESGHGGLCNIVCTQPRRIAAISVAERVSDERCEPSPGTNGS 720
Query: 721 LVGYHVRLDSARNANTKLLFCTTGILLRQIVGDGNLTGITHIIVDEVHERSLLDDFLLVV 780
LVGYHVRLDSARNANTKLLFCTTGILLRQIVGDGNLTGITHIIVDEVHERSLLDDFLLVV
Sbjct: 721 LVGYHVRLDSARNANTKLLFCTTGILLRQIVGDGNLTGITHIIVDEVHERSLLDDFLLVV 780
Query: 781 LKNLVEKRSAESSSPLKVILMSATVDSNLFSGYFGNCPVITAEGRMHPVTTYFLEDIYES 840
LKNL+EKRSAESSSPLKVILMSATVDSNLFSGYFGNCPVITAEGRMHPVTTYFLEDIYES
Sbjct: 781 LKNLIEKRSAESSSPLKVILMSATVDSNLFSGYFGNCPVITAEGRMHPVTTYFLEDIYES 840
Query: 841 TGYLLASDSPAAIRYEVSSGKKNAPVNYRRGKKNLILSAWGDEALLSEACTNPYYNLDCY 900
TGYLLASDSPAAIRYEVSSGKKNAPVNYRRGKKNLILSAWGDEALLSEACTNPYYNLDCY
Sbjct: 841 TGYLLASDSPAAIRYEVSSGKKNAPVNYRRGKKNLILSAWGDEALLSEACTNPYYNLDCY 900
Query: 901 QSYSELTQKNLERLNEDAIDYDLLEDLVIHVDKTFDEGAILVFLPGVSEINLLYDRLAAS 960
QSYSELTQKNLERLNEDAIDYDLLEDLVIHVDKTFDEGAIL+FLPGVSEINLLYDRLAAS
Sbjct: 901 QSYSELTQKNLERLNEDAIDYDLLEDLVIHVDKTFDEGAILIFLPGVSEINLLYDRLAAS 960
Query: 961 YQFGGQASDWILPLHSSIASTDQKKVFLRPPHGIRKVIIATNIAETSITIDDVIYVIDCG 1020
YQFGGQASDWILPLHSSIAS DQKKVFLRPPHGIRKVIIATNIAETSITIDDVIYVIDCG
Sbjct: 961 YQFGGQASDWILPLHSSIASADQKKVFLRPPHGIRKVIIATNIAETSITIDDVIYVIDCG 1020
Query: 1021 RHKEKRYNPQKKLSSMVEDWISQANARQRRGRAGRVRPGNCFCLYTRHRYEKFMRPFQVP 1080
RHKEKRYNPQKKLSSMVEDWISQANARQRRGRAGRVRPGNCFCLYTRHRYEK MRPFQVP
Sbjct: 1021 RHKEKRYNPQKKLSSMVEDWISQANARQRRGRAGRVRPGNCFCLYTRHRYEKLMRPFQVP 1080
Query: 1081 EMLRMPLVELCLQIKLLSLGYIRPFLSKALEPPREEAMTSAISLLYEVGALEGDEELTPL 1140
EMLRMPLVELCLQIKLLSLGYIRPFLSKALEPPREEAMTSAISLLYEVGALEGDEELTPL
Sbjct: 1081 EMLRMPLVELCLQIKLLSLGYIRPFLSKALEPPREEAMTSAISLLYEVGALEGDEELTPL 1140
Query: 1141 GQHLAKLPVDVLIGKMMLYGGIFGCLSSILSISAFLSYKSPFIYPKDERQNVERAKLALL 1200
GQHLAKLPVDVLIGKMMLYGGIFGCLSSILSISAFLSYKSPFIYPKDERQNVERAKLALL
Sbjct: 1141 GQHLAKLPVDVLIGKMMLYGGIFGCLSSILSISAFLSYKSPFIYPKDERQNVERAKLALL 1200
Query: 1201 SDERYGLGESCSNDKQSDHLIMATAYKKWEILLHQKGPKAAQEFCKSYFLSSSVMYMIRD 1260
SDER+GLGESCSNDKQSDHLIMATAYKKWEILLHQKGPKAAQEFCKSYFLSSSVMYMIRD
Sbjct: 1201 SDERHGLGESCSNDKQSDHLIMATAYKKWEILLHQKGPKAAQEFCKSYFLSSSVMYMIRD 1260
Query: 1261 MRVQFGTLLADIGLVDLPKKSRFDRVRKEDLNGWFSDSSQPFNINSDHPSIVKAVLCAGL 1320
MRVQFGTLLADIGLVDLPKKSRFDRVRKEDLNGWFSDSSQPFNINSDHPSIVKAVLCAGL
Sbjct: 1261 MRVQFGTLLADIGLVDLPKKSRFDRVRKEDLNGWFSDSSQPFNINSDHPSIVKAVLCAGL 1320
Query: 1321 YPNIAAGVAGITEAALSSLGRSSGPATTARPSLYDGRREVYIHPSSVNSNLKTFQYPFHV 1380
YPNIAAGVAGITEAALSSLGRSSGPATTARPSLYDGRREVYIHPSSVNSNLKTFQYPFHV
Sbjct: 1321 YPNIAAGVAGITEAALSSLGRSSGPATTARPSLYDGRREVYIHPSSVNSNLKTFQYPFHV 1380
Query: 1381 FLEKVETNKVFIRDTSVVSPYSILLFGGSINVQHQSGIVIIDGWLKLTAPAQIAVLFKEL 1440
FLEKVETNKVFIRDTSVVSPYSILLFGGSINVQHQSGIVIIDGWLKLTAPAQIAVLFKEL
Sbjct: 1381 FLEKVETNKVFIRDTSVVSPYSILLFGGSINVQHQSGIVIIDGWLKLTAPAQIAVLFKEL 1440
Query: 1441 RLTLHSILKELIRRPETSIIINNEVLKSIVRLLLEEDKPLT 1481
RLTLHSILKELIRRPETSI+INN+VLKSIVRLLLEEDKPLT
Sbjct: 1441 RLTLHSILKELIRRPETSIVINNDVLKSIVRLLLEEDKPLT 1481
BLAST of CmoCh16G004250 vs. NCBI nr
Match:
KAG7015014.1 (DExH-box ATP-dependent RNA helicase DExH7, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 2845.8 bits (7376), Expect = 0.0e+00
Identity = 1467/1480 (99.12%), Postives = 1471/1480 (99.39%), Query Frame = 0
Query: 1 MAPRKKQQQQPKQKQNNRKSNPTSSTSDSRSSTSGAKLHISAENETRLRRLLLSSGRSTP 60
MAPRKK QQQPKQKQNNRKSNPTSSTSDSRSSTSGAKLHISAENETRLRRLLLSSGRSTP
Sbjct: 1 MAPRKK-QQQPKQKQNNRKSNPTSSTSDSRSSTSGAKLHISAENETRLRRLLLSSGRSTP 60
Query: 61 SVTHADDSLSKVQKVKKLQSVYEKLSCEGFTNDQIELALSTIGDSATFEAALDWLCLNLP 120
SVTHADDSLSKVQKVKKLQSVYEKLSCEGFTNDQIELALSTIGD ATFEAALDWLCLNLP
Sbjct: 61 SVTHADDSLSKVQKVKKLQSVYEKLSCEGFTNDQIELALSTIGDGATFEAALDWLCLNLP 120
Query: 121 SSELPLKFSSGTSLHAHAGGSVRILQTAQKDCPPVGVQSSKYKDGDKDIPVILNRRKDDD 180
SSELPLKFSSGTSLHAHAGGSVRILQTAQKDCPPVGVQSSKYKDGDKDIPVILNRRKDDD
Sbjct: 121 SSELPLKFSSGTSLHAHAGGSVRILQTAQKDCPPVGVQSSKYKDGDKDIPVILNRRKDDD 180
Query: 181 KLDLFQSSQAEWIKQYVEQQEEDDYGTWEDDLADEVSSKASRARSYDVIAEEYYAARLEA 240
KLDLFQSSQAEWIKQYVEQQEEDDYGTWEDDLADEVSSKASRARSYDVIAEEYYAARLEA
Sbjct: 181 KLDLFQSSQAEWIKQYVEQQEEDDYGTWEDDLADEVSSKASRARSYDVIAEEYYAARLEA 240
Query: 241 AKAKEEGDKKRQETAGNTIRKLKQELFAQGLSDDMLASEFEFGRALDNASKDAPTQDQNF 300
AKAKEEGDKKRQETAGNTIRKLKQELFAQGLSDDMLASEFEFGRALDNASKDAPTQDQNF
Sbjct: 241 AKAKEEGDKKRQETAGNTIRKLKQELFAQGLSDDMLASEFEFGRALDNASKDAPTQDQNF 300
Query: 301 GVNQTDDVGSSLDLSVHRNESVDIDGRDRSTSKEISVDLMSSQEKESTVDVDGRDCSTPK 360
GV QTDDVGSSLDLSVHRNESVDIDGRDRSTSKEISVDLMSSQEKESTVDVDGRDCSTPK
Sbjct: 301 GVKQTDDVGSSLDLSVHRNESVDIDGRDRSTSKEISVDLMSSQEKESTVDVDGRDCSTPK 360
Query: 361 EISVGLISSQGKNDCEELEDVEIGNFFVEDVETNSNVAQELLELKKREKLRELSSGKNLE 420
EISVGLISSQGKNDCEELEDVEIGNFFVEDVETNS+VAQELLELKKREKLRELSSGKNLE
Sbjct: 361 EISVGLISSQGKNDCEELEDVEIGNFFVEDVETNSDVAQELLELKKREKLRELSSGKNLE 420
Query: 421 KLDGIWKKGDPLKIPKAVLHQLCQKAGWDAPKFNKIHRKENVFFYAVNILRKASGRGKNR 480
KLDGIWKKGDPLKIPKAVLHQLCQKAGWDAPKFNKIHRKENVFFYAVNILRKASGRGKNR
Sbjct: 421 KLDGIWKKGDPLKIPKAVLHQLCQKAGWDAPKFNKIHRKENVFFYAVNILRKASGRGKNR 480
Query: 481 KAGGLITLQLPDADEIFDSAEDAQNKVAAFALYHLFPDVPVHLALIEPYATLVMQWKAGE 540
KAGGLITLQLPDADEIFDSAEDAQNKVAAFALYHLFPDVPVHLALIEPYATLVMQWKAGE
Sbjct: 481 KAGGLITLQLPDADEIFDSAEDAQNKVAAFALYHLFPDVPVHLALIEPYATLVMQWKAGE 540
Query: 541 STSKVDDNEKDRRASFVDSLLDASSSDSASKTFVGKIEQLHIEDDKKPTVSDLDSHSFVE 600
STSKVDDNEKDRRASFVDSLLDASSSDSASKTFVGKIEQLHIEDDKKPTVSDLDSHSFVE
Sbjct: 541 STSKVDDNEKDRRASFVDSLLDASSSDSASKTFVGKIEQLHIEDDKKPTVSDLDSHSFVE 600
Query: 601 RLNSNTQNESSHLRLEHENKKKTKRYQDMLKNRAALPIASLRGDILRLLKENSVLVVCGD 660
RLNSNTQNESS LRLEHENKKKTK+YQDMLKNRAALPIASLRGDILRLLKENSVLVVCGD
Sbjct: 601 RLNSNTQNESSRLRLEHENKKKTKQYQDMLKNRAALPIASLRGDILRLLKENSVLVVCGD 660
Query: 661 TGSGKTTQVPQFILDDMIESGHGGLCNIVCTQPRRIAAISVAERVSDERCEPSPGTNGSL 720
TGSGKTTQVPQFILDDMIESGHGGLCNIVCTQPRRIAAISVAERVSDERCE SPGTNGSL
Sbjct: 661 TGSGKTTQVPQFILDDMIESGHGGLCNIVCTQPRRIAAISVAERVSDERCEHSPGTNGSL 720
Query: 721 VGYHVRLDSARNANTKLLFCTTGILLRQIVGDGNLTGITHIIVDEVHERSLLDDFLLVVL 780
VGYHVRLDSARN NTKLLFCTTGILLRQIVGDGNLTGITHIIVDEVHERSLLDDFLLVVL
Sbjct: 721 VGYHVRLDSARNGNTKLLFCTTGILLRQIVGDGNLTGITHIIVDEVHERSLLDDFLLVVL 780
Query: 781 KNLVEKRSAESSSPLKVILMSATVDSNLFSGYFGNCPVITAEGRMHPVTTYFLEDIYEST 840
KNL+EKRSAESSSPLKVILMSATVDSNLFSGYFGNCPVITAEGRMHPVTTYFLEDIYEST
Sbjct: 781 KNLIEKRSAESSSPLKVILMSATVDSNLFSGYFGNCPVITAEGRMHPVTTYFLEDIYEST 840
Query: 841 GYLLASDSPAAIRYEVSSGKKNAPVNYRRGKKNLILSAWGDEALLSEACTNPYYNLDCYQ 900
GYLLASDSPAAIRYEVSSGKKNAPVNYRRGKKNLILSAWGDEALLSEACTNPYYNLDCYQ
Sbjct: 841 GYLLASDSPAAIRYEVSSGKKNAPVNYRRGKKNLILSAWGDEALLSEACTNPYYNLDCYQ 900
Query: 901 SYSELTQKNLERLNEDAIDYDLLEDLVIHVDKTFDEGAILVFLPGVSEINLLYDRLAASY 960
SYSELTQKNLERLNEDAIDYDLLEDLVIHVDKTFDEGAILVFLPGVSEINLLYDRLAASY
Sbjct: 901 SYSELTQKNLERLNEDAIDYDLLEDLVIHVDKTFDEGAILVFLPGVSEINLLYDRLAASY 960
Query: 961 QFGGQASDWILPLHSSIASTDQKKVFLRPPHGIRKVIIATNIAETSITIDDVIYVIDCGR 1020
QFGGQASDWILPLHSSIASTDQKKVFLRPPHGIRKVIIATNIAETSITIDDVIYVIDCGR
Sbjct: 961 QFGGQASDWILPLHSSIASTDQKKVFLRPPHGIRKVIIATNIAETSITIDDVIYVIDCGR 1020
Query: 1021 HKEKRYNPQKKLSSMVEDWISQANARQRRGRAGRVRPGNCFCLYTRHRYEKFMRPFQVPE 1080
HKEKRYNPQKKLSSMVEDWISQANARQRRGRAGRVRPGNCFCLYTRHRYEK MRPFQVPE
Sbjct: 1021 HKEKRYNPQKKLSSMVEDWISQANARQRRGRAGRVRPGNCFCLYTRHRYEKLMRPFQVPE 1080
Query: 1081 MLRMPLVELCLQIKLLSLGYIRPFLSKALEPPREEAMTSAISLLYEVGALEGDEELTPLG 1140
MLRMPLVELCLQIKLLSLGYIRPFLSKALEPPREEAMTSAISLLYEVGALEGDEELTPLG
Sbjct: 1081 MLRMPLVELCLQIKLLSLGYIRPFLSKALEPPREEAMTSAISLLYEVGALEGDEELTPLG 1140
Query: 1141 QHLAKLPVDVLIGKMMLYGGIFGCLSSILSISAFLSYKSPFIYPKDERQNVERAKLALLS 1200
QHLAKLPVDVLIGKMMLYGGIFGCLSSILSISAFLSYKSPFIYPKDERQNVERAKLALLS
Sbjct: 1141 QHLAKLPVDVLIGKMMLYGGIFGCLSSILSISAFLSYKSPFIYPKDERQNVERAKLALLS 1200
Query: 1201 DERYGLGESCSNDKQSDHLIMATAYKKWEILLHQKGPKAAQEFCKSYFLSSSVMYMIRDM 1260
DERYGLGESCSNDKQSDHLIMATAYKKWEILLHQKGPKAAQEFCKSYFLSSSVMYMIRDM
Sbjct: 1201 DERYGLGESCSNDKQSDHLIMATAYKKWEILLHQKGPKAAQEFCKSYFLSSSVMYMIRDM 1260
Query: 1261 RVQFGTLLADIGLVDLPKKSRFDRVRKEDLNGWFSDSSQPFNINSDHPSIVKAVLCAGLY 1320
RVQFGTLLADIGLVDLPKKS FDRVRKEDLNGWFSDSSQPFNINSDHP IVKA+LCAGLY
Sbjct: 1261 RVQFGTLLADIGLVDLPKKSCFDRVRKEDLNGWFSDSSQPFNINSDHPPIVKAILCAGLY 1320
Query: 1321 PNIAAGVAGITEAALSSLGRSSGPATTARPSLYDGRREVYIHPSSVNSNLKTFQYPFHVF 1380
PNIAAGVAGITEAALSSLGRSSGPATTARPSLYDGRREVYIHPSSVNSNLKTFQYPFHVF
Sbjct: 1321 PNIAAGVAGITEAALSSLGRSSGPATTARPSLYDGRREVYIHPSSVNSNLKTFQYPFHVF 1380
Query: 1381 LEKVETNKVFIRDTSVVSPYSILLFGGSINVQHQSGIVIIDGWLKLTAPAQIAVLFKELR 1440
LEKVETNKVFIRDTSVVSPYSILLFGGSINVQHQSGIVIIDGWLKLTAPAQIAVLFKELR
Sbjct: 1381 LEKVETNKVFIRDTSVVSPYSILLFGGSINVQHQSGIVIIDGWLKLTAPAQIAVLFKELR 1440
Query: 1441 LTLHSILKELIRRPETSIIINNEVLKSIVRLLLEEDKPLT 1481
LTLHSILKELIRRPETSIIINNEVLKSIVRLLLEEDKPLT
Sbjct: 1441 LTLHSILKELIRRPETSIIINNEVLKSIVRLLLEEDKPLT 1479
BLAST of CmoCh16G004250 vs. NCBI nr
Match:
XP_022984154.1 (DExH-box ATP-dependent RNA helicase DExH7, chloroplastic [Cucurbita maxima])
HSP 1 Score: 2831.6 bits (7339), Expect = 0.0e+00
Identity = 1458/1480 (98.51%), Postives = 1467/1480 (99.12%), Query Frame = 0
Query: 1 MAPRKKQQQQPKQKQNNRKSNPTSSTSDSRSSTSGAKLHISAENETRLRRLLLSSGRSTP 60
MAPRKK QQQPKQKQNNRKSNPTSST DSRSSTSGAKLHISAENETRLRRLLLSSGRSTP
Sbjct: 1 MAPRKK-QQQPKQKQNNRKSNPTSSTPDSRSSTSGAKLHISAENETRLRRLLLSSGRSTP 60
Query: 61 SVTHADDSLSKVQKVKKLQSVYEKLSCEGFTNDQIELALSTIGDSATFEAALDWLCLNLP 120
SVTHADDSLSKVQKVKKLQSVYEKLSCEGFTNDQIELALSTIGD ATFEAALDWLCLNLP
Sbjct: 61 SVTHADDSLSKVQKVKKLQSVYEKLSCEGFTNDQIELALSTIGDGATFEAALDWLCLNLP 120
Query: 121 SSELPLKFSSGTSLHAHAGGSVRILQTAQKDCPPVGVQSSKYKDGDKDIPVILNRRKDDD 180
SSELPLKFSSGTSLHAHAGGSVRILQTAQKDCPPVGVQSSKYKDGDKDIPVILNRRKDDD
Sbjct: 121 SSELPLKFSSGTSLHAHAGGSVRILQTAQKDCPPVGVQSSKYKDGDKDIPVILNRRKDDD 180
Query: 181 KLDLFQSSQAEWIKQYVEQQEEDDYGTWEDDLADEVSSKASRARSYDVIAEEYYAARLEA 240
KLDLFQSSQAEWIKQYVEQQEEDDYGTWEDDL DEVSSKASRARSYDVIAEEYYAARLEA
Sbjct: 181 KLDLFQSSQAEWIKQYVEQQEEDDYGTWEDDLDDEVSSKASRARSYDVIAEEYYAARLEA 240
Query: 241 AKAKEEGDKKRQETAGNTIRKLKQELFAQGLSDDMLASEFEFGRALDNASKDAPTQDQNF 300
AKAKEEGDKKRQE AGNTIRKLKQELFAQGLSDDMLASEFEFGRALDNASKDAP QDQNF
Sbjct: 241 AKAKEEGDKKRQEIAGNTIRKLKQELFAQGLSDDMLASEFEFGRALDNASKDAPMQDQNF 300
Query: 301 GVNQTDDVGSSLDLSVHRNESVDIDGRDRSTSKEISVDLMSSQEKESTVDVDGRDCSTPK 360
GVNQTDDVGSSLDLS RNES DIDG+DRSTSKE+SVDLMSSQEKESTVDVDGRDCSTPK
Sbjct: 301 GVNQTDDVGSSLDLSAQRNESFDIDGKDRSTSKELSVDLMSSQEKESTVDVDGRDCSTPK 360
Query: 361 EISVGLISSQGKNDCEELEDVEIGNFFVEDVETNSNVAQELLELKKREKLRELSSGKNLE 420
EISVGLISSQGKNDCEELEDVEIGNFFVEDVETNS+VAQELLELKK+EKLRELSSGKNLE
Sbjct: 361 EISVGLISSQGKNDCEELEDVEIGNFFVEDVETNSDVAQELLELKKKEKLRELSSGKNLE 420
Query: 421 KLDGIWKKGDPLKIPKAVLHQLCQKAGWDAPKFNKIHRKENVFFYAVNILRKASGRGKNR 480
KLDGIWKKGDPLKIPKAVLHQLCQKAGWDAPKFNKIHRKENVFFYAVNILRKASGRGKNR
Sbjct: 421 KLDGIWKKGDPLKIPKAVLHQLCQKAGWDAPKFNKIHRKENVFFYAVNILRKASGRGKNR 480
Query: 481 KAGGLITLQLPDADEIFDSAEDAQNKVAAFALYHLFPDVPVHLALIEPYATLVMQWKAGE 540
KAGGLITLQLPDADEIFDSAEDAQNKVAAF+LYHLFPDVPVHLALIEPYATLVMQWKAGE
Sbjct: 481 KAGGLITLQLPDADEIFDSAEDAQNKVAAFSLYHLFPDVPVHLALIEPYATLVMQWKAGE 540
Query: 541 STSKVDDNEKDRRASFVDSLLDASSSDSASKTFVGKIEQLHIEDDKKPTVSDLDSHSFVE 600
STSKVDDNEKDRRASFVDSLLDASSSDSASKTFVGKIEQLHIEDDKKPTVSDLDSHSFVE
Sbjct: 541 STSKVDDNEKDRRASFVDSLLDASSSDSASKTFVGKIEQLHIEDDKKPTVSDLDSHSFVE 600
Query: 601 RLNSNTQNESSHLRLEHENKKKTKRYQDMLKNRAALPIASLRGDILRLLKENSVLVVCGD 660
RLNSNTQNESS LRLEHENKKKTK+YQDMLKNRAALPIASLRGDILRLLKENSVLVVCGD
Sbjct: 601 RLNSNTQNESSRLRLEHENKKKTKQYQDMLKNRAALPIASLRGDILRLLKENSVLVVCGD 660
Query: 661 TGSGKTTQVPQFILDDMIESGHGGLCNIVCTQPRRIAAISVAERVSDERCEPSPGTNGSL 720
TGSGKTTQVPQFILDD IESGHGGLCNIVCTQPRRIAAISVAERVSDERCEPSPGTNGSL
Sbjct: 661 TGSGKTTQVPQFILDDKIESGHGGLCNIVCTQPRRIAAISVAERVSDERCEPSPGTNGSL 720
Query: 721 VGYHVRLDSARNANTKLLFCTTGILLRQIVGDGNLTGITHIIVDEVHERSLLDDFLLVVL 780
VGYHVRLDSARNANTKLLFCTTGILLRQIVGDGNLTGITHIIVDEVHERSLLDDFLLVVL
Sbjct: 721 VGYHVRLDSARNANTKLLFCTTGILLRQIVGDGNLTGITHIIVDEVHERSLLDDFLLVVL 780
Query: 781 KNLVEKRSAESSSPLKVILMSATVDSNLFSGYFGNCPVITAEGRMHPVTTYFLEDIYEST 840
K+L+EKRSAESSSPLKVILMSATVDSNLFSGYFGNCPVITAEGRMHPVTTYFLEDIYEST
Sbjct: 781 KSLIEKRSAESSSPLKVILMSATVDSNLFSGYFGNCPVITAEGRMHPVTTYFLEDIYEST 840
Query: 841 GYLLASDSPAAIRYEVSSGKKNAPVNYRRGKKNLILSAWGDEALLSEACTNPYYNLDCYQ 900
GYLLASDSPAAIRYEVSSGKKNAPVNYRRGKKNLILSAWGDEALLSEACTNPYYNLDCYQ
Sbjct: 841 GYLLASDSPAAIRYEVSSGKKNAPVNYRRGKKNLILSAWGDEALLSEACTNPYYNLDCYQ 900
Query: 901 SYSELTQKNLERLNEDAIDYDLLEDLVIHVDKTFDEGAILVFLPGVSEINLLYDRLAASY 960
SYSELTQKNLERLNEDAIDYDLLEDLVIHVDKTFDEGAILVFLPGVSEINLLYDRLAASY
Sbjct: 901 SYSELTQKNLERLNEDAIDYDLLEDLVIHVDKTFDEGAILVFLPGVSEINLLYDRLAASY 960
Query: 961 QFGGQASDWILPLHSSIASTDQKKVFLRPPHGIRKVIIATNIAETSITIDDVIYVIDCGR 1020
QFGGQASDWILPLHSSIASTDQKKVFLRPPHGIRKVIIATNIAETSITIDDVIYVIDCGR
Sbjct: 961 QFGGQASDWILPLHSSIASTDQKKVFLRPPHGIRKVIIATNIAETSITIDDVIYVIDCGR 1020
Query: 1021 HKEKRYNPQKKLSSMVEDWISQANARQRRGRAGRVRPGNCFCLYTRHRYEKFMRPFQVPE 1080
HKEKRYNPQKKLSSMVEDWISQANARQRRGRAGRVRPGNCFCLYTRHRYEK MRPFQVPE
Sbjct: 1021 HKEKRYNPQKKLSSMVEDWISQANARQRRGRAGRVRPGNCFCLYTRHRYEKLMRPFQVPE 1080
Query: 1081 MLRMPLVELCLQIKLLSLGYIRPFLSKALEPPREEAMTSAISLLYEVGALEGDEELTPLG 1140
MLRMPLVELCLQIKLLSLGYIRPFLSKALEPPREEAMTSAISLLYEVGALEGDEELTPLG
Sbjct: 1081 MLRMPLVELCLQIKLLSLGYIRPFLSKALEPPREEAMTSAISLLYEVGALEGDEELTPLG 1140
Query: 1141 QHLAKLPVDVLIGKMMLYGGIFGCLSSILSISAFLSYKSPFIYPKDERQNVERAKLALLS 1200
QHLAKLPVDVLIGKMMLYGGIFGCLSSILSISAFLSYKSPFIYPKDERQNVERAKLALLS
Sbjct: 1141 QHLAKLPVDVLIGKMMLYGGIFGCLSSILSISAFLSYKSPFIYPKDERQNVERAKLALLS 1200
Query: 1201 DERYGLGESCSNDKQSDHLIMATAYKKWEILLHQKGPKAAQEFCKSYFLSSSVMYMIRDM 1260
DERYGLGESCSNDKQSDHLIMATAYKKWEILLHQKGPKAAQEFCKSYFLSSSVMYMIRDM
Sbjct: 1201 DERYGLGESCSNDKQSDHLIMATAYKKWEILLHQKGPKAAQEFCKSYFLSSSVMYMIRDM 1260
Query: 1261 RVQFGTLLADIGLVDLPKKSRFDRVRKEDLNGWFSDSSQPFNINSDHPSIVKAVLCAGLY 1320
RVQFGTLLADIGL+DLPKKSRFDRVRKEDLNGWFSDSSQPFNINSDHPSIVKAVLCAGLY
Sbjct: 1261 RVQFGTLLADIGLIDLPKKSRFDRVRKEDLNGWFSDSSQPFNINSDHPSIVKAVLCAGLY 1320
Query: 1321 PNIAAGVAGITEAALSSLGRSSGPATTARPSLYDGRREVYIHPSSVNSNLKTFQYPFHVF 1380
PNIAAGVAGITEAALSSLGRSSGPATTARPSLYDGRREVYIHPSSVNSNLKTFQYPFHVF
Sbjct: 1321 PNIAAGVAGITEAALSSLGRSSGPATTARPSLYDGRREVYIHPSSVNSNLKTFQYPFHVF 1380
Query: 1381 LEKVETNKVFIRDTSVVSPYSILLFGGSINVQHQSGIVIIDGWLKLTAPAQIAVLFKELR 1440
LEKVETNKVFIRDTSVVSPYSILLFGGSINVQHQSGIVIIDGWLKLTAPAQIAVLFKELR
Sbjct: 1381 LEKVETNKVFIRDTSVVSPYSILLFGGSINVQHQSGIVIIDGWLKLTAPAQIAVLFKELR 1440
Query: 1441 LTLHSILKELIRRPETSIIINNEVLKSIVRLLLEEDKPLT 1481
LTLHSILKELIRRPETSIIINNEVLKSIVRLLLEE KPLT
Sbjct: 1441 LTLHSILKELIRRPETSIIINNEVLKSIVRLLLEEGKPLT 1479
BLAST of CmoCh16G004250 vs. NCBI nr
Match:
KAG6576993.1 (DExH-box ATP-dependent RNA helicase DExH7, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 2766.9 bits (7171), Expect = 0.0e+00
Identity = 1438/1480 (97.16%), Postives = 1440/1480 (97.30%), Query Frame = 0
Query: 1 MAPRKKQQQQPKQKQNNRKSNPTSSTSDSRSSTSGAKLHISAENETRLRRLLLSSGRSTP 60
MAPRKK QQQPKQKQNNRKSNPTSSTSDSRSSTSGAKLHISAENETRLRRLLLSSGRSTP
Sbjct: 1 MAPRKK-QQQPKQKQNNRKSNPTSSTSDSRSSTSGAKLHISAENETRLRRLLLSSGRSTP 60
Query: 61 SVTHADDSLSKVQKVKKLQSVYEKLSCEGFTNDQIELALSTIGDSATFEAALDWLCLNLP 120
SVTHADDSLSKVQKVKKLQSVYEKLSCEGFTNDQIELALSTIGD ATFEAALDWLCLNLP
Sbjct: 61 SVTHADDSLSKVQKVKKLQSVYEKLSCEGFTNDQIELALSTIGDGATFEAALDWLCLNLP 120
Query: 121 SSELPLKFSSGTSLHAHAGGSVRILQTAQKDCPPVGVQSSKYKDGDKDIPVILNRRKDDD 180
SSELPLKFSSGTSLHAHAGGSVRILQTAQKDCPPVGVQSSKYKDGDKDIPVILNRRKDDD
Sbjct: 121 SSELPLKFSSGTSLHAHAGGSVRILQTAQKDCPPVGVQSSKYKDGDKDIPVILNRRKDDD 180
Query: 181 KLDLFQSSQAEWIKQYVEQQEEDDYGTWEDDLADEVSSKASRARSYDVIAEEYYAARLEA 240
KLDLFQSSQAEWIKQYVEQQEEDDYGTWEDDLADE ASRARSYDVIAEEYYAARLEA
Sbjct: 181 KLDLFQSSQAEWIKQYVEQQEEDDYGTWEDDLADE----ASRARSYDVIAEEYYAARLEA 240
Query: 241 AKAKEEGDKKRQETAGNTIRKLKQELFAQGLSDDMLASEFEFGRALDNASKDAPTQDQNF 300
AKAKEEGDKKRQETAGNTIRKLKQELFAQGLSDDMLASEFEFGRALDNASKDAPTQDQNF
Sbjct: 241 AKAKEEGDKKRQETAGNTIRKLKQELFAQGLSDDMLASEFEFGRALDNASKDAPTQDQNF 300
Query: 301 GVNQTDDVGSSLDLSVHRNESVDIDGRDRSTSKEISVDLMSSQEKESTVDVDGRDCSTPK 360
GVNQTDDVGSSLDLSVHRNESVDIDGRDRSTSKEISVDLMSSQEKESTVDVDGRDCSTPK
Sbjct: 301 GVNQTDDVGSSLDLSVHRNESVDIDGRDRSTSKEISVDLMSSQEKESTVDVDGRDCSTPK 360
Query: 361 EISVGLISSQGKNDCEELEDVEIGNFFVEDVETNSNVAQELLELKKREKLRELSSGKNLE 420
EISVGLISSQGKNDCEELEDVEIGNFFVEDVETNS+VAQELLELKKREKLRELSSGKNLE
Sbjct: 361 EISVGLISSQGKNDCEELEDVEIGNFFVEDVETNSDVAQELLELKKREKLRELSSGKNLE 420
Query: 421 KLDGIWKKGDPLKIPKAVLHQLCQKAGWDAPKFNKIHRKENVFFYAVNILRKASGRGKNR 480
KLDGIWKKGDPLKIPKAVLHQLCQKAGWDAPKFNKIHRKENVFFYAVNILRKASGRGKNR
Sbjct: 421 KLDGIWKKGDPLKIPKAVLHQLCQKAGWDAPKFNKIHRKENVFFYAVNILRKASGRGKNR 480
Query: 481 KAGGLITLQLPDADEIFDSAEDAQNKVAAFALYHLFPDVPVHLALIEPYATLVMQWKAGE 540
KAGGLITLQLPDADEIFDSAEDAQNKVAAFALYHLFPDVPVHLALIEPYATLVMQWKAGE
Sbjct: 481 KAGGLITLQLPDADEIFDSAEDAQNKVAAFALYHLFPDVPVHLALIEPYATLVMQWKAGE 540
Query: 541 STSKVDDNEKDRRASFVDSLLDASSSDSASKTFVGKIEQLHIEDDKKPTVSDLDSHSFVE 600
STSKVDDNEKDRRASFVDSLLDASSSDSASKTFVGKIEQLHIEDDKKPTVSDLDSHSFVE
Sbjct: 541 STSKVDDNEKDRRASFVDSLLDASSSDSASKTFVGKIEQLHIEDDKKPTVSDLDSHSFVE 600
Query: 601 RLNSNTQNESSHLRLEHENKKKTKRYQDMLKNRAALPIASLRGDILRLLKENSVLVVCGD 660
RLNSNTQNESS LRLEHENKKKTK+YQDMLKNRAALPIASLRGDILRLLKENSVLVVCGD
Sbjct: 601 RLNSNTQNESSRLRLEHENKKKTKQYQDMLKNRAALPIASLRGDILRLLKENSVLVVCGD 660
Query: 661 TGSGKTTQVPQFILDDMIESGHGGLCNIVCTQPRRIAAISVAERVSDERCEPSPGTNGSL 720
TGSGKTTQVPQFILDDMIESGHGGLCNIVCTQPRRIAAISVAERVSDERCEPSPGTNGSL
Sbjct: 661 TGSGKTTQVPQFILDDMIESGHGGLCNIVCTQPRRIAAISVAERVSDERCEPSPGTNGSL 720
Query: 721 VGYHVRLDSARNANTKLLFCTTGILLRQIVGDGNLTGITHIIVDEVHERSLLDDFLLVVL 780
GDGNLTGITHIIVDEVHERSLLDDFLLVVL
Sbjct: 721 ------------------------------GDGNLTGITHIIVDEVHERSLLDDFLLVVL 780
Query: 781 KNLVEKRSAESSSPLKVILMSATVDSNLFSGYFGNCPVITAEGRMHPVTTYFLEDIYEST 840
KNLVEKRSAE SSPLKVILMSATVDSNLFSGYFGNCPVITAEGRMHPVTTYFLEDIYEST
Sbjct: 781 KNLVEKRSAERSSPLKVILMSATVDSNLFSGYFGNCPVITAEGRMHPVTTYFLEDIYEST 840
Query: 841 GYLLASDSPAAIRYEVSSGKKNAPVNYRRGKKNLILSAWGDEALLSEACTNPYYNLDCYQ 900
GYLLASDSPAAIRYEVSSGKKNAPVNYRRGKKNLILSAWGDEALLSEACTNPYYNLDCYQ
Sbjct: 841 GYLLASDSPAAIRYEVSSGKKNAPVNYRRGKKNLILSAWGDEALLSEACTNPYYNLDCYQ 900
Query: 901 SYSELTQKNLERLNEDAIDYDLLEDLVIHVDKTFDEGAILVFLPGVSEINLLYDRLAASY 960
SYSELTQKNLERLNEDAIDYDLLEDLVIHVDKTFDEGAILVFLPGVSEINLLYDRLAASY
Sbjct: 901 SYSELTQKNLERLNEDAIDYDLLEDLVIHVDKTFDEGAILVFLPGVSEINLLYDRLAASY 960
Query: 961 QFGGQASDWILPLHSSIASTDQKKVFLRPPHGIRKVIIATNIAETSITIDDVIYVIDCGR 1020
QFGGQASDWILPLHSSIASTDQKKVFLRPPHGIRKVIIATNIAETSITIDDVIYVIDCGR
Sbjct: 961 QFGGQASDWILPLHSSIASTDQKKVFLRPPHGIRKVIIATNIAETSITIDDVIYVIDCGR 1020
Query: 1021 HKEKRYNPQKKLSSMVEDWISQANARQRRGRAGRVRPGNCFCLYTRHRYEKFMRPFQVPE 1080
HKEKRYNPQKKLSSMVEDWISQANARQRRGRAGRVRPGNCFCLYTRHRYEK MRPFQVPE
Sbjct: 1021 HKEKRYNPQKKLSSMVEDWISQANARQRRGRAGRVRPGNCFCLYTRHRYEKLMRPFQVPE 1080
Query: 1081 MLRMPLVELCLQIKLLSLGYIRPFLSKALEPPREEAMTSAISLLYEVGALEGDEELTPLG 1140
MLRMPLVELCLQIKLLSLGYIRPFLSKALEPPREEAMTSAISLLYEVGALEGDEELTPLG
Sbjct: 1081 MLRMPLVELCLQIKLLSLGYIRPFLSKALEPPREEAMTSAISLLYEVGALEGDEELTPLG 1140
Query: 1141 QHLAKLPVDVLIGKMMLYGGIFGCLSSILSISAFLSYKSPFIYPKDERQNVERAKLALLS 1200
QHLAKLPVDVLIGKMMLYGGIFGCLSSILSISAFLSYKSPFIYPKDERQNVERAKLALLS
Sbjct: 1141 QHLAKLPVDVLIGKMMLYGGIFGCLSSILSISAFLSYKSPFIYPKDERQNVERAKLALLS 1200
Query: 1201 DERYGLGESCSNDKQSDHLIMATAYKKWEILLHQKGPKAAQEFCKSYFLSSSVMYMIRDM 1260
DERYGLGESCSNDKQSDHLIMATAYKKWEILLHQKGPKAAQEFCKSYFLSSSVMYMIRDM
Sbjct: 1201 DERYGLGESCSNDKQSDHLIMATAYKKWEILLHQKGPKAAQEFCKSYFLSSSVMYMIRDM 1260
Query: 1261 RVQFGTLLADIGLVDLPKKSRFDRVRKEDLNGWFSDSSQPFNINSDHPSIVKAVLCAGLY 1320
RVQFGTLLADIGLVDLPKKSRFDRVRKEDLN WFSDSSQPFNINSDHPSIVKAVLCAGLY
Sbjct: 1261 RVQFGTLLADIGLVDLPKKSRFDRVRKEDLNDWFSDSSQPFNINSDHPSIVKAVLCAGLY 1320
Query: 1321 PNIAAGVAGITEAALSSLGRSSGPATTARPSLYDGRREVYIHPSSVNSNLKTFQYPFHVF 1380
PNIAAGVAGITEAALSSLGRSSGPATTARPSLYDGRREVYIHPSSVNSNLKTFQYPFHVF
Sbjct: 1321 PNIAAGVAGITEAALSSLGRSSGPATTARPSLYDGRREVYIHPSSVNSNLKTFQYPFHVF 1380
Query: 1381 LEKVETNKVFIRDTSVVSPYSILLFGGSINVQHQSGIVIIDGWLKLTAPAQIAVLFKELR 1440
LEKVETNKVFIRDTSVVSPYSILLFGGSINVQHQSGIVIIDGWLKLTAPAQIAVLFKELR
Sbjct: 1381 LEKVETNKVFIRDTSVVSPYSILLFGGSINVQHQSGIVIIDGWLKLTAPAQIAVLFKELR 1440
Query: 1441 LTLHSILKELIRRPETSIIINNEVLKSIVRLLLEEDKPLT 1481
LTLHSILKELIRRPETSIIINNEVLKSIVRLLLEEDKPLT
Sbjct: 1441 LTLHSILKELIRRPETSIIINNEVLKSIVRLLLEEDKPLT 1445
BLAST of CmoCh16G004250 vs. TAIR 10
Match:
AT1G58060.1 (RNA helicase family protein )
HSP 1 Score: 1697.6 bits (4395), Expect = 0.0e+00
Identity = 916/1490 (61.48%), Postives = 1139/1490 (76.44%), Query Frame = 0
Query: 1 MAPRKKQQQQPKQKQNNRKSNPTSSTSDSRSSTSGAKLHISAENETRLRRLLLSSGRSTP 60
MAP+KK P+++ N S+ +SS S+ + +SG KL ISAENE RLRRLLL+SGRS P
Sbjct: 1 MAPKKK----PQKQSNKAASSSSSSKSNYQKPSSGPKLQISAENEDRLRRLLLNSGRSGP 60
Query: 61 SV-THADDSLSKVQKVKKLQSVYEKLSCEGFTNDQIELALSTIGDSATFEAALDWLCLNL 120
S+ +SLSK QK KKL +VYEKLSCEGF +DQIELALS++ D ATFEAALDWLCLNL
Sbjct: 61 SIPAPISNSLSKAQKTKKLNNVYEKLSCEGFVDDQIELALSSLRDGATFEAALDWLCLNL 120
Query: 121 PSSELPLKFSSGTSLHAHAGGSVRILQTAQKDCPPVGVQSSKYKDGDKDIPV-ILNRRKD 180
PS ELP+KFS+G S GGSV ++ T++ D S + ++ + + V + ++ +
Sbjct: 121 PSHELPVKFSTGASRFPSTGGSVGVISTSRDDWNDSTDSSVRVEEEEPAVFVRVKGKQDE 180
Query: 181 DDKLDLFQSSQAEWIKQYVEQQEEDDYGTWEDDL-ADEVSSKASRARSYDVIAEEYYAAR 240
+D L +SSQA+WI+QY+ +QEE++ WED++ + +K S R +DVIA+EYY+AR
Sbjct: 181 EDTLSSDKSSQADWIRQYMMRQEEEELECWEDEVDGIDPRNKVSGPRPFDVIAKEYYSAR 240
Query: 241 LEAAKAKEEGDKKRQETAGNTIRKLKQELFAQGLSDDMLASEFEFGRALDNASKDAPTQD 300
+A KAKE+ DK+ QE AG IRKLKQE+ GLS+ ML SEF+ A ++A++
Sbjct: 241 SDAIKAKEKRDKRGQEQAGLAIRKLKQEISDLGLSEAMLESEFQREHAFESATEQE---- 300
Query: 301 QNFGVNQTDDVGSSLDLSVHRNESVDIDGRDRSTSKEISVDLMSSQEKESTVDVDGRDCS 360
S+ +S + +ESVD D ++SV ++ + T++ + +
Sbjct: 301 ------------STCPISDNLHESVDAD--------DVSVQMLDN----LTLNTNPAESY 360
Query: 361 TPKEISVGLI--SSQGKN---DCEELEDVEIGNFFVEDVETNSNVAQELLELKKREKLRE 420
+EI + SS G++ E+ EDVE+G+ F E++ + ELLEL+K EK+RE
Sbjct: 361 ESEEIQTKALPSSSSGQDFVASDEDSEDVELGDTFFEEIPPSEISPHELLELQKEEKMRE 420
Query: 421 LSSGKNLEKLDGIWKKGDPLKIPKAVLHQLCQKAGWDAPKFNKIHRKENVFFYAVNILRK 480
L S KNL KLDGIWKKG+ KIPKA LHQLCQ++GW+APKFNK + F Y V+ILRK
Sbjct: 421 LRSEKNLGKLDGIWKKGEAQKIPKAFLHQLCQRSGWEAPKFNKETGEGRNFSYTVSILRK 480
Query: 481 ASGRGKNRKAGGLITLQLPDADEIFDSAEDAQNKVAAFALYHLFPDVPVHLALIEPYATL 540
ASGRGKNR+AGGL+TLQLP DE F+S EDAQNKVAAFAL+ LF D+PVH A+ EPYA+L
Sbjct: 481 ASGRGKNRQAGGLVTLQLPPKDENFESIEDAQNKVAAFALHKLFSDLPVHFAITEPYASL 540
Query: 541 VMQWKAGE-STSKVDDNEKDRRASFVDSLL--DASSSDSASKTFVGKIEQLHIEDDKKPT 600
V+ WK E + + E+DRRA+FVD LL D+ S ++S +F + + K
Sbjct: 541 VLIWKQEELLCTTIQSTEEDRRANFVDKLLEEDSFSLTTSSSSFENSLPLVDSYVKDKDD 600
Query: 601 VSDLDSHSFVERLNSNTQNESSHLRLEHENKKKTKRYQDMLKNRAALPIASLRGDILRLL 660
+ + S++ +R +S + E L+ + ENKK+T++Y+DMLK R ALPI+ ++ IL+ L
Sbjct: 601 LGVVKSNNRAKR-DSYIEAECLSLQRKQENKKRTQKYKDMLKTRTALPISEVKNGILQHL 660
Query: 661 KENSVLVVCGDTGSGKTTQVPQFILDDMIESGHGGLCNIVCTQPRRIAAISVAERVSDER 720
KE VLVVCG+TGSGKTTQVPQFILDDMI+SGHGG CNI+CTQPRRIAAISVA+RV+DER
Sbjct: 661 KEKDVLVVCGETGSGKTTQVPQFILDDMIDSGHGGYCNIICTQPRRIAAISVAQRVADER 720
Query: 721 CEPSPGTNGSLVGYHVRLDSARNANTKLLFCTTGILLRQIVGDGNLTGITHIIVDEVHER 780
CE SPG + SLVGY VRL+SAR+ T+LLFCTTGILLR++ GD L +THIIVDEVHER
Sbjct: 721 CESSPGLDDSLVGYQVRLESARSDKTRLLFCTTGILLRKLAGDRTLNDVTHIIVDEVHER 780
Query: 781 SLLDDFLLVVLKNLVEKRSAESSS-PLKVILMSATVDSNLFSGYFGNCPVITAEGRMHPV 840
SLL DFLL++LK+L+EK+S +++S LKVILMSATVD++LFS YFG+CPVITA+GR HPV
Sbjct: 781 SLLGDFLLIILKSLIEKQSCDNTSRKLKVILMSATVDADLFSRYFGHCPVITAQGRTHPV 840
Query: 841 TTYFLEDIYESTGYLLASDSPAAIRYEVSSGKKNAPVNYRRGKKNLILSAWGDEALLSEA 900
TT+FLE+IYES YLLA DSPAA+R + S K VN RRGKKNL+L+ WGD+ LLSE
Sbjct: 841 TTHFLEEIYESINYLLAPDSPAALRSDTSIKDKLGSVNDRRGKKNLVLAGWGDDYLLSED 900
Query: 901 CTNPYYNLDCYQSYSELTQKNLERLNEDAIDYDLLEDLVIHVDKTFDEGAILVFLPGVSE 960
C NP+Y Y SYS+ TQ+NL+RLNED IDY+LLE+L+ H+D T +EGAIL+FLPGV+E
Sbjct: 901 CLNPFYVSSNYNSYSDQTQQNLKRLNEDRIDYELLEELICHIDDTCEEGAILIFLPGVAE 960
Query: 961 INLLYDRLAASYQFGGQASDWILPLHSSIASTDQKKVFLRPPHGIRKVIIATNIAETSIT 1020
I +L D LAASY+F G A+DW+LPLHSSIAS++Q+KVFLRPP G+RKVI ATNIAETSIT
Sbjct: 961 IYMLLDMLAASYRFRGPAADWLLPLHSSIASSEQRKVFLRPPKGLRKVIAATNIAETSIT 1020
Query: 1021 IDDVIYVIDCGRHKEKRYNPQKKLSSMVEDWISQANARQRRGRAGRVRPGNCFCLYTRHR 1080
IDDV+YVID G+HKE RYNPQKKLSSMVEDWISQANARQR GRAGRV+PG CF LYTR+R
Sbjct: 1021 IDDVVYVIDSGKHKENRYNPQKKLSSMVEDWISQANARQRTGRAGRVKPGICFSLYTRYR 1080
Query: 1081 YEKFMRPFQVPEMLRMPLVELCLQIKLLSLGYIRPFLSKALEPPREEAMTSAISLLYEVG 1140
+EK MRP+QVPEMLRMPLVELCLQIKLL LG+I+PFLS+ALEPP E AMTSAISLL+EVG
Sbjct: 1081 FEKLMRPYQVPEMLRMPLVELCLQIKLLGLGHIKPFLSRALEPPSEGAMTSAISLLHEVG 1140
Query: 1141 ALEGDEELTPLGQHLAKLPVDVLIGKMMLYGGIFGCLSSILSISAFLSYKSPFIYPKDER 1200
A+EGDEELTPLG HLAKLPVDVLIGKM+LYGGIFGCLS ILSI+AFLSYKSPFIYPKDE+
Sbjct: 1141 AVEGDEELTPLGHHLAKLPVDVLIGKMLLYGGIFGCLSPILSIAAFLSYKSPFIYPKDEK 1200
Query: 1201 QNVERAKLALLSDERYGLGESCSNDKQSDHLIMATAYKKWEILLHQKGPKAAQEFCKSYF 1260
QNV+R KLALLSD + +ND+QSDHL+M AY KW +L ++G KAAQ FC+S F
Sbjct: 1201 QNVDRVKLALLSDNGVSSSDLNNNDRQSDHLLMMVAYDKWVKILQERGMKAAQRFCESKF 1260
Query: 1261 LSSSVMYMIRDMRVQFGTLLADIGLVDLPKKSRFDRVRKEDLNGWFSDSSQPFNINSDHP 1320
LSSSVM MIRDMRVQFGTLLADIGL++LPK F +KE+L+ WFSD +QPFN+ S P
Sbjct: 1261 LSSSVMRMIRDMRVQFGTLLADIGLINLPKTGEFSGRKKENLDVWFSDPTQPFNMYSQQP 1320
Query: 1321 SIVKAVLCAGLYPNIAAGVAGITEAALSSLGRSSGPATTARPSLYDGRREVYIHPSSVNS 1380
+VKA+LCAGLYPNIAA GITE +SL + G T + + YDGRREV+IHPSS+NS
Sbjct: 1321 EVVKAILCAGLYPNIAANDKGITETTFNSLTK-QGNQTKSYSAWYDGRREVHIHPSSINS 1380
Query: 1381 NLKTFQYPFHVFLEKVETNKVFIRDTSVVSPYSILLFGGSINVQHQSGIVIIDGWLKLTA 1440
N K FQ PF VFLEKVETNKV++RDT++VSP+SILLFGGSINV HQSG V IDGWLK+ A
Sbjct: 1381 NFKAFQNPFLVFLEKVETNKVYLRDTTIVSPFSILLFGGSINVHHQSGSVTIDGWLKVAA 1440
Query: 1441 PAQIAVLFKELRLTLHSILKELIRRPETSIIINNEVLKSIVRLLLEEDKP 1479
PAQ AVLFKELRLTLHSILK+LIR+PE S I++NEV+KS+V LL+EE KP
Sbjct: 1441 PAQTAVLFKELRLTLHSILKDLIRKPEKSGIVHNEVVKSMVHLLIEEGKP 1456
BLAST of CmoCh16G004250 vs. TAIR 10
Match:
AT1G58050.1 (RNA helicase family protein )
HSP 1 Score: 1470.7 bits (3806), Expect = 0.0e+00
Identity = 843/1496 (56.35%), Postives = 1059/1496 (70.79%), Query Frame = 0
Query: 1 MAPRKKQQQQPKQKQNNRKSNPTSSTSDSRSSTSGAKLHISAENETRLRRLLLSSGRSTP 60
MAP KK Q+ + K N ++ S + + KL IS ENE RLRRLLL+ R TP
Sbjct: 1 MAPTKKPQKNKQSK--NEIASSLIPNSGHKKPSKAPKLLISPENEDRLRRLLLNF-RRTP 60
Query: 61 SVTHADDSLSKVQKVKKLQSVYEKLSCEGFTNDQIELALSTIGDSATFEAALDWLCLNLP 120
S A +LS QK KKL ++YE LSCEGF ++QIEL LS++ D AT E ALDWLCLNLP
Sbjct: 61 SPVTA--TLSVTQKRKKLNNLYENLSCEGFLDNQIELVLSSLRDGATLETALDWLCLNLP 120
Query: 121 SSELPLKFSSGTSLHAHAGGSVRILQTAQKD---CPPVGVQSSKYKDGDKDIPVILNRR- 180
S ELP+ FS+G S G SV ++ ++KD VQ K + + + ++R
Sbjct: 121 SHELPVNFSNGASRFPSTGRSVAVISKSKKDWNVSAESSVQEVKEVPESEVLVRVKSKRD 180
Query: 181 -KDDDKLDLFQSSQAEWIKQYVEQQEEDDYGTWEDDLADEVSSKASRARSYDVIAEEYYA 240
+++D L Q SQA+WI QY+++ EE+ E + +D+ K S RS++VIA+EY
Sbjct: 181 EEEEDSLSSCQPSQADWIHQYMKRLEEE-----ELESSDDERDKVSGPRSFEVIAKEYCV 240
Query: 241 ARLEAAKAKEEGDKKRQETAGNTIRKLKQELFAQGLSDDMLASEFEFGRALDNASKDAPT 300
R A KAK +GDK Q AG I KLK+E+ A G S+ +L SEF+ R
Sbjct: 241 ERYNAIKAKRKGDKSGQSQAGLAICKLKEEMNALGPSEAILESEFQRDR----------- 300
Query: 301 QDQNFGVNQTDDVGSSLDLSVHRNESVDIDGRDRSTSKEISVDL-----MSSQEKESTVD 360
QD G + + S LD VH ESV+ D ++++D S+E+ES V
Sbjct: 301 QDCE-GAREKEVASSVLD-DVH--ESVNADAFFFQLFDDLTLDTNPVGSCKSEEQESVVS 360
Query: 361 VDGRDCSTPKEISVGLISSQGKNDCEELEDVEIGNFFVEDVETNSNVAQELLELKKREKL 420
D L+D+++G+ F EDV ELLEL+K+E +
Sbjct: 361 ND------------------------SLDDLDLGDLFDEDVPPYVPSPHELLELQKKEIM 420
Query: 421 RELSSGKNLEKLDGIWKKGDPLKIPKAVLHQLCQKAGWDAPKFNKIHRKENVFFYAVNIL 480
REL + K+L KL+GIWKKG+ KIPKA+LHQLCQ++GW APKFNK+ + F Y +++
Sbjct: 421 RELCNEKHLTKLNGIWKKGEAQKIPKALLHQLCQRSGWIAPKFNKVTGEGRNFSYTTSVM 480
Query: 481 RKASGRGKNRKAGGLITLQLPDADEIFDSAEDAQNKVAAFALYHLFPDVPVHLALIEPYA 540
RK+SG GK+R+AGGL+T+QLP E F+S +DAQN+VAAFAL+ LF D+PVH A+ EPYA
Sbjct: 481 RKSSGFGKSRQAGGLVTIQLPHQVEDFESIQDAQNRVAAFALHKLFSDLPVHFAITEPYA 540
Query: 541 TLVMQWKAGESTSKVDDNEKDRRASFVDSLLDASSSDSASKTFVGKIEQLHIEDDKKPTV 600
+LV+ WK ES + E+ RR FV+SLL+A + S + T G L + D
Sbjct: 541 SLVLIWKQEESLG-ITSREEQRREKFVESLLEADNF-SLTTTSRGIHSALPMVDSCVKEN 600
Query: 601 SDLD--SHSFVERLNSNTQNESSHLRLEHENKKKTKRYQDMLKNRAALPIASLRGDILRL 660
DLD + R NS+ E S L+ + ENKKK ++Y+DMLK RAALPI+ ++ DIL+
Sbjct: 601 DDLDVVKSNHRARRNSSMAAECSSLKQKQENKKKMQKYKDMLKTRAALPISEVKKDILQK 660
Query: 661 LKENSVLVVCGDTGSGKTTQVPQFILDDMIESGHGGLCNIVCTQPRRIAAISVAERVSDE 720
LKE VLVVCG+TGSGKTTQVPQFILDDMI+SGHGG CNI+CTQPR AI+VA+RV+DE
Sbjct: 661 LKEKDVLVVCGETGSGKTTQVPQFILDDMIDSGHGGYCNIICTQPR---AITVAQRVADE 720
Query: 721 RCEPSPGTNGSLVGYHVRLDSARNANTKLLFCTTGILLRQIVGDGNLTGITHIIVDEVHE 780
RCEP PG + S+V Y VR +AR+ T+LLFCTTGILLR++VGD L +THIIVDEVHE
Sbjct: 721 RCEPPPGFDNSVVAYQVRHQNARSDKTRLLFCTTGILLRKLVGDTTLKDVTHIIVDEVHE 780
Query: 781 RSLLDDFLLVVLKNLVEKRSAESSSP-LKVILMSATVDSNLFSGYFGNCPVITAEGRMHP 840
RSL+ DFLL++LK+L+EK+S +++ P LKVILMSATVD++ FS YFG CP+ITA+GR HP
Sbjct: 781 RSLMGDFLLIILKSLIEKQSWDNALPKLKVILMSATVDAHQFSRYFGQCPIITAQGRTHP 840
Query: 841 VTTYFLEDIYESTGYLLASDSPAAIRYEVSSGKKNAPVNYRRGKKNLILSAWGDEALLSE 900
VTTYFLEDIYE T YLLASDSPAA+ + S K VN RGKKNL+L+ WGD L+SE
Sbjct: 841 VTTYFLEDIYERTKYLLASDSPAALSSDTSITDKLGSVNVPRGKKNLMLAGWGDSYLVSE 900
Query: 901 ACTNPYYNLDCYQSYSELTQKNLERLNEDAIDYDLLEDLVIHVDKTFDEGAILVFLPGVS 960
N Y+ +++ + +DYDLLE+L+ H+D T +EGAILVFLPG+S
Sbjct: 901 DSLNTSYD-------------SIKYIASAVVDYDLLEELICHIDDTCEEGAILVFLPGMS 960
Query: 961 EINLLYDRLAASYQFGGQASDWILPLHSSIASTDQKKVFLRPPHGIRKVIIATNIAETSI 1020
EIN+L +RLAASY+F G + DW+LPLHSSIAST+QKKVFLRPP GIRKVIIATNIAETSI
Sbjct: 961 EINMLLNRLAASYRFRGASGDWLLPLHSSIASTEQKKVFLRPPKGIRKVIIATNIAETSI 1020
Query: 1021 TIDDVIYVIDCGRHKEKRYNPQKKLSSMVEDWISQANARQRRGRAGRVRPGNCFCLYTRH 1080
TI+DV+YVID G+HKE RYNP KKLSSMVEDW+S+ANARQR GRAGRV+PG+CF LYTRH
Sbjct: 1021 TIEDVVYVIDSGKHKENRYNPHKKLSSMVEDWVSKANARQRMGRAGRVKPGHCFSLYTRH 1080
Query: 1081 RYEKFMRPFQVPEMLRMPLVELCLQIKLLSLGYIRPFLSKALEPPREEAMTSAISLLYEV 1140
R+EK MRP+QVPEMLR+PLVELCL IKLL LG I+PFLSKALEPP E A+ SAI LL++V
Sbjct: 1081 RFEKLMRPYQVPEMLRVPLVELCLHIKLLGLGQIKPFLSKALEPPSESAINSAILLLHKV 1140
Query: 1141 GALEGDEELTPLGQHLAKLPVDVLIGKMMLYGGIFGCLSSILSISAFLS-YKSPFIYPKD 1200
GALEGDEELTPLG HLAKLPVD+LIGKM+LYGGIFGCLS ILSI+AFLS KSPF+Y KD
Sbjct: 1141 GALEGDEELTPLGHHLAKLPVDLLIGKMLLYGGIFGCLSPILSIAAFLSCCKSPFVYAKD 1200
Query: 1201 ERQNVERAKLALLSDERYGLGESCSNDKQSDHLIMATAYKKWEILLHQKGPKAAQEFCKS 1260
E QNV+R KLALLSD+ +ND+QSDHL+M AY+KW +LH++G KAA+ FC+S
Sbjct: 1201 E-QNVDRVKLALLSDKLESSSNLNNNDRQSDHLLMVVAYEKWVRILHEQGFKAAESFCES 1260
Query: 1261 YFLSSSVMYMIRDMRVQFGTLLADIGLVDLPK-KSRFDRVRKEDLNGWFSDSSQPFNINS 1320
FL+SSVM M+R+ RV+FG LLADIGL++LPK K R RKE+ + WFSD +QPFN+ S
Sbjct: 1261 KFLNSSVMRMMRERRVEFGMLLADIGLINLPKGKGR----RKENFDVWFSDKTQPFNMYS 1320
Query: 1321 DHPSIVKAVLCAGLYPNIAAGVAGITEAALSSLGRSSGPA--TTARPSLYDGRREVYIHP 1380
P +VKA+LCAGL PNIA G+ + R + PA T +DG+REV+IH
Sbjct: 1321 QEPEVVKAILCAGLCPNIAEGL----------VNRLTKPAEETQRYAVWHDGKREVHIHR 1380
Query: 1381 SSVNSNLKTFQYPFHVFLEKVETNK-VFIRDTSVVSPYSILLFGGSINVQHQSGIVIIDG 1440
+S+N N K FQYPF VFLEK+ET K V+++DT+VVSP+SILLFGGSINV HQSG V IDG
Sbjct: 1381 NSINKNCKAFQYPFIVFLEKLETKKVVYLQDTTVVSPFSILLFGGSINVHHQSGSVTIDG 1414
Query: 1441 WLKLTAPAQIAVLFKELRLTLHSILKELIRRPETSIIINNEVLKSIVRLLLEEDKP 1479
WLKLTAPAQ AVLFKELRLTLHSILK+LIR+PE S I++NEV+KS+V LL+EE KP
Sbjct: 1441 WLKLTAPAQTAVLFKELRLTLHSILKDLIRKPEKSGIVHNEVVKSMVHLLIEEGKP 1414
BLAST of CmoCh16G004250 vs. TAIR 10
Match:
AT2G35920.1 (RNA helicase family protein )
HSP 1 Score: 572.0 bits (1473), Expect = 1.4e-162
Identity = 363/941 (38.58%), Postives = 540/941 (57.39%), Query Frame = 0
Query: 544 KVDDNEKDRRASFVDSLLDASSSDSASKTFVGKIEQLHIEDDKKPTVSDLDSHSFVERLN 603
K+ + + S + + ++ SS +++ F + ++ K+P DS S +L
Sbjct: 142 KMSTETERKLGSLLKTTQESGSSGASASAFNDQQDRTSTLGLKRP-----DSAS---KLP 201
Query: 604 SNTQNE--SSHLRLEHENKKKTKRYQDMLKNRAALPIASLRGDILRLLKENSVLVVCGDT 663
+ + E S L+ E K T+ + + R LP ++ + L + +N VLVV G+T
Sbjct: 202 DSLEKEKFSFALKERQEKLKATESVKALKAFREKLPAFKMKEEFLNSVSQNQVLVVSGET 261
Query: 664 GSGKTTQVPQFILDDMIESGHGGLCNIVCTQPRRIAAISVAERVSDERCEPSPGTNGSLV 723
G GKTTQ+PQFIL++ I S G CNI+CTQPRRI+AISVA R+S ER E + G V
Sbjct: 262 GCGKTTQLPQFILEEEISSLRGADCNIICTQPRRISAISVASRISAERGE----SIGESV 321
Query: 724 GYHVRLDSARNANTKLLFCTTGILLRQIVGDGNLTGITHIIVDEVHERSLLDDFLLVVLK 783
GY +RL+S R+ T+LLFCTTG+LLR+++ D NLT ++H++VDE+HER + +DFLL++L+
Sbjct: 322 GYQIRLESKRSDQTRLLFCTTGVLLRRLIEDPNLTNVSHLLVDEIHERGMNEDFLLIILR 381
Query: 784 NLVEKRSAESSSPLKVILMSATVDSNLFSGYFGNCPVITAEGRMHPVTTYFLEDIYESTG 843
+L+ +R L++ILMSAT+++++FS YFGN P + G PV FLED+ E +
Sbjct: 382 DLLPRR-----PDLRLILMSATINADMFSTYFGNSPTMHIPGFTFPVAELFLEDVLEKSR 441
Query: 844 YLLASDSPAAIRYEVSSGKKNAPVNYRRGKKNLILSAWGDEALLSEACTNPYYNLDC--- 903
Y + S Y+ SS RG++ S D L E ++D
Sbjct: 442 YNIKSSDSG--NYQGSS----------RGRRRESESKKDDLTTLFE-------DIDINSH 501
Query: 904 YQSYSELTQKNLERLNEDAIDYDLLEDLVIHVDKTFDEGAILVFLPGVSEINLLYDRLAA 963
Y+SYS T+ +LE + ID DL+E + H+ + GAILVFL G EI+ L +++
Sbjct: 502 YKSYSSATRNSLEAWSGAQIDVDLVEATIEHICRLEGGGAILVFLTGWDEISKLLEKINM 561
Query: 964 SYQFGGQASDWILPLHSSIASTDQKKVFLRPPHGIRKVIIATNIAETSITIDDVIYVIDC 1023
+ G + +LPLH S+ + +Q+++F RPP RK+++ATNIAE+SITIDDV+YV+DC
Sbjct: 562 NNFLGDSSKFLVLPLHGSMPTVNQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDC 621
Query: 1024 GRHKEKRYNPQKKLSSMVEDWISQANARQRRGRAGRVRPGNCFCLYTRHRYEKFMRPFQV 1083
G+ KE Y+ K++ ++ WIS+A+A QRRGRAGRV+ G C+ LY + Y+ F + +Q+
Sbjct: 622 GKAKETSYDALNKVACLLPSWISKASAHQRRGRAGRVQAGVCYRLYPKVIYDAFPQ-YQL 681
Query: 1084 PEMLRMPLVELCLQIKLLSLGYIRPFLSKALEPPREEAMTSAISLLYEVGALEGDEELTP 1143
PE++R PL ELCL IK L +G I FL+KAL+PP A+ +AI LL +GAL EELTP
Sbjct: 682 PEIIRTPLQELCLHIKSLQVGSIGSFLAKALQPPDALAVENAIELLKTIGALNDVEELTP 741
Query: 1144 LGQHLAKLPVDVLIGKMMLYGGIFGCLSSILSISAFLSYKSPFIYPKDERQNVERAKLAL 1203
LG+HL LPVD IGKM+L G IF C++ L+I+A L+Y+SPF+ P + ++ + AK
Sbjct: 742 LGRHLCTLPVDPNIGKMLLIGAIFQCVNPALTIAAALAYRSPFVLPLNRKEEADEAK--- 801
Query: 1204 LSDERYGLGESCSNDKQSDHLIMATAYKKWEILLHQKGPKAAQEFCKSYFLSSSVMYMIR 1263
RY G+SC SDH+ + AY+ + K ++FC FLS + M+
Sbjct: 802 ----RYFAGDSC-----SDHIALLKAYEGYR---DAKRGGNEKDFCWQNFLSPVTLRMME 861
Query: 1264 DMRVQFGTLLADIGLVDLPKKSRFDRVRKEDLNGWFSDSSQPFNINSDHPSIVKAVLCAG 1323
DMR QF LL+DIG VD K + +N S ++ AVLCAG
Sbjct: 862 DMRNQFLDLLSDIGFVDKSKPN-------------------AYNQYSYDMEMISAVLCAG 921
Query: 1324 LYPNIAAGVAGITEAALSSLGRSSGPATTARPSLYDGR-REVYIHPSSVNSNLKTFQYPF 1383
LYPN+ G+ R + Y +V IHP SVN+ + F P+
Sbjct: 922 LYPNV---------VQCKRRGK--------RTAFYTKELGKVDIHPGSVNARVNLFSLPY 981
Query: 1384 HVFLEKVETNKVFIRDTSVVSPYSILLFGGS-INVQHQSGIVIIDGWLKLTAPAQIAVLF 1443
V+ EKV+T V+IRD++ +S Y++L+FGG+ I + GI ++ G+L +A I L
Sbjct: 982 LVYSEKVKTTSVYIRDSTNISDYALLMFGGNLIPSKTGEGIEMLGGYLHFSASKNILELI 994
Query: 1444 KELRLTLHSILKELIRRPETSIIINNEVLKSIVRLLLEEDK 1478
+ LR + +L + I P I + + + S V LL K
Sbjct: 1042 QRLRGEVDKLLNKKIEDPSLDITVEGKGVVSAVVELLRSQK 994
BLAST of CmoCh16G004250 vs. TAIR 10
Match:
AT1G48650.1 (DEA(D/H)-box RNA helicase family protein )
HSP 1 Score: 547.0 bits (1408), Expect = 4.8e-155
Identity = 325/852 (38.15%), Postives = 499/852 (58.57%), Query Frame = 0
Query: 627 QDMLKNRAALPIASLRGDILRLLKENSVLVVCGDTGSGKTTQVPQFILDDMIESGHGGLC 686
Q M+ R LP + +L+ + N V+VV G+TG GKTTQ+PQ+IL+ IE+ G C
Sbjct: 290 QKMVGFRKTLPAYKEKDALLKAIAANQVVVVSGETGCGKTTQLPQYILESEIEAARGATC 349
Query: 687 NIVCTQPRRIAAISVAERVSDERCEPSPGTNGSLVGYHVRLDSARNANTKLLFCTTGILL 746
+I+CTQPRRI+AISV+ERV+ ER E G VGY VRL+ R +T+LLFCTTG+LL
Sbjct: 350 SIICTQPRRISAISVSERVAAERGEQI----GESVGYKVRLEGMRGRDTRLLFCTTGVLL 409
Query: 747 RQIVGDGNLTGITHIIVDEVHERSLLDDFLLVVLKNLVEKRSAESSSPLKVILMSATVDS 806
R+++ D +L G+TH++VDE+HER + +DFLL+VLK+L+ +R LK+ILMSAT+++
Sbjct: 410 RRLLVDRSLKGVTHVVVDEIHERGMNEDFLLIVLKDLLPRR-----PDLKLILMSATLNA 469
Query: 807 NLFSGYFGNCPVITAEGRMHPVTTYFLEDIYESTGYLLASDSPAAIRYEVSSGKKNAPVN 866
LFS YFG P + G +PV +FLED E++GY L + + E + K
Sbjct: 470 ELFSSYFGGAPAMHIPGFTYPVRAHFLEDYLETSGYRLTTYNQIDDYGEEKTWKMQKQAQ 529
Query: 867 YRRGKKNLILSAWGDEALLSEACTNPYYNLDCYQSYSELTQKNLERLNEDAIDYDLLEDL 926
+++ +K+LI SA D ++ ++ Y+ T+ +L + D+I ++L+E++
Sbjct: 530 FKK-RKSLISSAVEDALEAAD-----------FKGYNFRTRDSLSCWSPDSIGFNLIENV 589
Query: 927 VIHVDKTFDEGAILVFLPGVSEINLLYDRLAASYQFGGQASDWILPLHSSIASTDQKKVF 986
+ H+ K GA+LVF+ G +IN L ++L A G +L H S+AS++Q+ +F
Sbjct: 590 LCHIVKGERPGAVLVFMTGWDDINSLKNQLEAHSLLGDPNKVLLLACHGSMASSEQRLIF 649
Query: 987 LRPPHGIRKVIIATNIAETSITIDDVIYVIDCGRHKEKRYNPQKKLSSMVEDWISQANAR 1046
RPP GIRK+++ATN+AETSITI+DV+YVIDCG+ KE Y+ ++ WIS+A AR
Sbjct: 650 DRPPEGIRKIVLATNMAETSITINDVVYVIDCGKAKETSYDALNNTPCLLPSWISKAAAR 709
Query: 1047 QRRGRAGRVRPGNCFCLYTRHRYEKFMRPFQVPEMLRMPLVELCLQIKLLSLGYIRPFLS 1106
QRRGRAGRV PG C+ LY R YE F +Q PE+LR PL LCLQIK L LG I FLS
Sbjct: 710 QRRGRAGRVMPGECYHLYPRCVYEAF-ADYQQPELLRTPLQSLCLQIKSLGLGSISEFLS 769
Query: 1107 KALEPPREEAMTSAISLLYEVGALEGDEELTPLGQHLAKLPVDVLIGKMMLYGGIFGCLS 1166
+AL+PP ++ +A+ L +GAL+ DE LTPLG++L+ LPV+ +GKM++ G IF CL
Sbjct: 770 RALQPPEALSVQNAVEYLKIIGALDDDENLTPLGKNLSMLPVEPKLGKMLILGAIFNCLD 829
Query: 1167 SILSISAFLSYKSPFIYPKDERQNVERAKLALLSDERYGLGESCSNDKQSDHLIMATAYK 1226
++++ A LS + PF+ P D++ E A+ S SDHL + AY
Sbjct: 830 PVMTVVAGLSVRDPFLMPFDKKDLAETAR------------SKFSGRDYSDHLTLVRAYN 889
Query: 1227 KWEILLHQKGPKAAQEFCKSYFLSSSVMYMIRDMRVQFGTLLADIGLVDLPKKSRFDRVR 1286
W+ + + ++C FLSS + + MR QF LL + L+D
Sbjct: 890 GWK---DAERTHSGYDYCWKNFLSSQTLKAMDSMRKQFFNLLKEASLID----------- 949
Query: 1287 KEDLNGWFSDSSQPFNINSDHPSIVKAVLCAGLYPNIAAGVAGITEAALSSLGRSSGPAT 1346
++ G S + +H +V+A++CAG++P + + V L
Sbjct: 950 --NIEGCSKLS------HDEH--LVRAIICAGMFPGVCSVVNKEKSITLK---------- 1009
Query: 1347 TARPSLYDGRREVYIHPSSVNSNLKTFQYPFHVFLEKVETNKVFIRDTSVVSPYSILLFG 1406
++ DG +V ++ SSVN N+ +P+ VF +KV+ N VF+RD++ VS +LLFG
Sbjct: 1010 ----TMEDG--QVLLYSSSVNGNVPMIPFPWLVFNDKVKVNSVFLRDSTAVSDSVLLLFG 1066
Query: 1407 GSINVQHQSG-IVIIDGWLKLTAPAQIAVLFKELRLTLHSILKELIRRPETSIIINNEVL 1466
I+ G + ++ G+L+ +A + L+ L +++ + P+ I + ++++
Sbjct: 1070 DKISSGGFDGHLKMLGGYLEFFMKPTLAYTYLSLKRELDELIQNKLVNPKLDIQLYDKLM 1066
Query: 1467 KSIVRLLLEEDK 1478
+I RLL+ ED+
Sbjct: 1130 TAI-RLLVSEDQ 1066
BLAST of CmoCh16G004250 vs. TAIR 10
Match:
AT1G48650.2 (DEA(D/H)-box RNA helicase family protein )
HSP 1 Score: 547.0 bits (1408), Expect = 4.8e-155
Identity = 325/852 (38.15%), Postives = 499/852 (58.57%), Query Frame = 0
Query: 627 QDMLKNRAALPIASLRGDILRLLKENSVLVVCGDTGSGKTTQVPQFILDDMIESGHGGLC 686
Q M+ R LP + +L+ + N V+VV G+TG GKTTQ+PQ+IL+ IE+ G C
Sbjct: 290 QKMVGFRKTLPAYKEKDALLKAIAANQVVVVSGETGCGKTTQLPQYILESEIEAARGATC 349
Query: 687 NIVCTQPRRIAAISVAERVSDERCEPSPGTNGSLVGYHVRLDSARNANTKLLFCTTGILL 746
+I+CTQPRRI+AISV+ERV+ ER E G VGY VRL+ R +T+LLFCTTG+LL
Sbjct: 350 SIICTQPRRISAISVSERVAAERGEQI----GESVGYKVRLEGMRGRDTRLLFCTTGVLL 409
Query: 747 RQIVGDGNLTGITHIIVDEVHERSLLDDFLLVVLKNLVEKRSAESSSPLKVILMSATVDS 806
R+++ D +L G+TH++VDE+HER + +DFLL+VLK+L+ +R LK+ILMSAT+++
Sbjct: 410 RRLLVDRSLKGVTHVVVDEIHERGMNEDFLLIVLKDLLPRR-----PDLKLILMSATLNA 469
Query: 807 NLFSGYFGNCPVITAEGRMHPVTTYFLEDIYESTGYLLASDSPAAIRYEVSSGKKNAPVN 866
LFS YFG P + G +PV +FLED E++GY L + + E + K
Sbjct: 470 ELFSSYFGGAPAMHIPGFTYPVRAHFLEDYLETSGYRLTTYNQIDDYGEEKTWKMQKQAQ 529
Query: 867 YRRGKKNLILSAWGDEALLSEACTNPYYNLDCYQSYSELTQKNLERLNEDAIDYDLLEDL 926
+++ +K+LI SA D ++ ++ Y+ T+ +L + D+I ++L+E++
Sbjct: 530 FKK-RKSLISSAVEDALEAAD-----------FKGYNFRTRDSLSCWSPDSIGFNLIENV 589
Query: 927 VIHVDKTFDEGAILVFLPGVSEINLLYDRLAASYQFGGQASDWILPLHSSIASTDQKKVF 986
+ H+ K GA+LVF+ G +IN L ++L A G +L H S+AS++Q+ +F
Sbjct: 590 LCHIVKGERPGAVLVFMTGWDDINSLKNQLEAHSLLGDPNKVLLLACHGSMASSEQRLIF 649
Query: 987 LRPPHGIRKVIIATNIAETSITIDDVIYVIDCGRHKEKRYNPQKKLSSMVEDWISQANAR 1046
RPP GIRK+++ATN+AETSITI+DV+YVIDCG+ KE Y+ ++ WIS+A AR
Sbjct: 650 DRPPEGIRKIVLATNMAETSITINDVVYVIDCGKAKETSYDALNNTPCLLPSWISKAAAR 709
Query: 1047 QRRGRAGRVRPGNCFCLYTRHRYEKFMRPFQVPEMLRMPLVELCLQIKLLSLGYIRPFLS 1106
QRRGRAGRV PG C+ LY R YE F +Q PE+LR PL LCLQIK L LG I FLS
Sbjct: 710 QRRGRAGRVMPGECYHLYPRCVYEAF-ADYQQPELLRTPLQSLCLQIKSLGLGSISEFLS 769
Query: 1107 KALEPPREEAMTSAISLLYEVGALEGDEELTPLGQHLAKLPVDVLIGKMMLYGGIFGCLS 1166
+AL+PP ++ +A+ L +GAL+ DE LTPLG++L+ LPV+ +GKM++ G IF CL
Sbjct: 770 RALQPPEALSVQNAVEYLKIIGALDDDENLTPLGKNLSMLPVEPKLGKMLILGAIFNCLD 829
Query: 1167 SILSISAFLSYKSPFIYPKDERQNVERAKLALLSDERYGLGESCSNDKQSDHLIMATAYK 1226
++++ A LS + PF+ P D++ E A+ S SDHL + AY
Sbjct: 830 PVMTVVAGLSVRDPFLMPFDKKDLAETAR------------SKFSGRDYSDHLTLVRAYN 889
Query: 1227 KWEILLHQKGPKAAQEFCKSYFLSSSVMYMIRDMRVQFGTLLADIGLVDLPKKSRFDRVR 1286
W+ + + ++C FLSS + + MR QF LL + L+D
Sbjct: 890 GWK---DAERTHSGYDYCWKNFLSSQTLKAMDSMRKQFFNLLKEASLID----------- 949
Query: 1287 KEDLNGWFSDSSQPFNINSDHPSIVKAVLCAGLYPNIAAGVAGITEAALSSLGRSSGPAT 1346
++ G S + +H +V+A++CAG++P + + V L
Sbjct: 950 --NIEGCSKLS------HDEH--LVRAIICAGMFPGVCSVVNKEKSITLK---------- 1009
Query: 1347 TARPSLYDGRREVYIHPSSVNSNLKTFQYPFHVFLEKVETNKVFIRDTSVVSPYSILLFG 1406
++ DG +V ++ SSVN N+ +P+ VF +KV+ N VF+RD++ VS +LLFG
Sbjct: 1010 ----TMEDG--QVLLYSSSVNGNVPMIPFPWLVFNDKVKVNSVFLRDSTAVSDSVLLLFG 1066
Query: 1407 GSINVQHQSG-IVIIDGWLKLTAPAQIAVLFKELRLTLHSILKELIRRPETSIIINNEVL 1466
I+ G + ++ G+L+ +A + L+ L +++ + P+ I + ++++
Sbjct: 1070 DKISSGGFDGHLKMLGGYLEFFMKPTLAYTYLSLKRELDELIQNKLVNPKLDIQLYDKLM 1066
Query: 1467 KSIVRLLLEEDK 1478
+I RLL+ ED+
Sbjct: 1130 TAI-RLLVSEDQ 1066
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
F4I9Q5 | 0.0e+00 | 61.48 | DExH-box ATP-dependent RNA helicase DExH7, chloroplastic OS=Arabidopsis thaliana... | [more] |
Q9C6G0 | 0.0e+00 | 56.35 | DExH-box ATP-dependent RNA helicase DExH4, chloroplastic OS=Arabidopsis thaliana... | [more] |
A3KMI0 | 5.3e-175 | 31.86 | ATP-dependent RNA helicase dhx29 OS=Xenopus laevis OX=8355 GN=dhx29 PE=2 SV=1 | [more] |
Q6PGC1 | 4.2e-172 | 31.22 | ATP-dependent RNA helicase DHX29 OS=Mus musculus OX=10090 GN=Dhx29 PE=1 SV=1 | [more] |
Q7Z478 | 1.2e-171 | 31.61 | ATP-dependent RNA helicase DHX29 OS=Homo sapiens OX=9606 GN=DHX29 PE=1 SV=2 | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1E7M1 | 0.0e+00 | 100.00 | DExH-box ATP-dependent RNA helicase DExH7, chloroplastic OS=Cucurbita moschata O... | [more] |
A0A6J1J9M9 | 0.0e+00 | 98.51 | DExH-box ATP-dependent RNA helicase DExH7, chloroplastic OS=Cucurbita maxima OX=... | [more] |
A0A1S3C1V6 | 0.0e+00 | 89.15 | DExH-box ATP-dependent RNA helicase DExH7, chloroplastic isoform X1 OS=Cucumis m... | [more] |
A0A6J1C3N5 | 0.0e+00 | 87.54 | DExH-box ATP-dependent RNA helicase DExH7, chloroplastic isoform X1 OS=Momordica... | [more] |
A0A1S4E0Z2 | 0.0e+00 | 89.17 | DExH-box ATP-dependent RNA helicase DExH7, chloroplastic isoform X2 OS=Cucumis m... | [more] |
Match Name | E-value | Identity | Description | |
XP_022922708.1 | 0.0e+00 | 100.00 | DExH-box ATP-dependent RNA helicase DExH7, chloroplastic [Cucurbita moschata] | [more] |
XP_023552212.1 | 0.0e+00 | 99.05 | DExH-box ATP-dependent RNA helicase DExH7, chloroplastic [Cucurbita pepo subsp. ... | [more] |
KAG7015014.1 | 0.0e+00 | 99.12 | DExH-box ATP-dependent RNA helicase DExH7, chloroplastic [Cucurbita argyrosperma... | [more] |
XP_022984154.1 | 0.0e+00 | 98.51 | DExH-box ATP-dependent RNA helicase DExH7, chloroplastic [Cucurbita maxima] | [more] |
KAG6576993.1 | 0.0e+00 | 97.16 | DExH-box ATP-dependent RNA helicase DExH7, chloroplastic, partial [Cucurbita arg... | [more] |