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CmoCh16G004090 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGATAATCAATTCGGTCGTTGTGGTCGGACTCTATTAGGGATTTCTGACCACATTCTTCATAGGGCCCTCTTATCTCTTCCTTCTCCGAGCTCGGGTTATGGAAGAAGGAACCGGTCATTGTGGTCGGACTCTATTATGGATTTCTGACCACATTTTCGATAGGGCCCTCTTATCTCTTCCTTTTTCGAGCTCGAGTTATGAAAGAAGGAACTGAAAAGAAAGTATCAGCAACAACAGGTTTTAATACGGGACAGTTCTTGATATTCATATTGATCTATTATGCACCTCTACATCTAGCATTGGGTAGATGTTATATTGATCTATTATGCACCTCTGCATCTAGCATTGGGTAG ATGAAGATAATCAATTCGGTCGTTGTGGGCCCTCTTATCTCTTCCTTCTCCGAGCTCGGGTTATGGAAGAAGGAACCGGTCATTGTGGTCGGACTCTATTATGGATTTCTGACCACATTTTCGATAGGGCCCTCTTATCTCTTCCTTTTTCGAGCTCGAGTTATGAAAGAAGGAACTGAAAAGAAAGTATCAGCAACAACAGGTTTTAATACGGGACAGTTCTTGATATTCATATTGATCTATTATGCACCTCTACATCTAGCATTGGGTAGATGTTATATTGATCTATTATGCACCTCTGCATCTAGCATTGGGTAG ATGAAGATAATCAATTCGGTCGTTGTGGGCCCTCTTATCTCTTCCTTCTCCGAGCTCGGGTTATGGAAGAAGGAACCGGTCATTGTGGTCGGACTCTATTATGGATTTCTGACCACATTTTCGATAGGGCCCTCTTATCTCTTCCTTTTTCGAGCTCGAGTTATGAAAGAAGGAACTGAAAAGAAAGTATCAGCAACAACAGGTTTTAATACGGGACAGTTCTTGATATTCATATTGATCTATTATGCACCTCTACATCTAGCATTGGGTAGATGTTATATTGATCTATTATGCACCTCTGCATCTAGCATTGGGTAG MKIINSVVVGPLISSFSELGLWKKEPVIVVGLYYGFLTTFSIGPSYLFLFRARVMKEGTEKKVSATTGFNTGQFLIFILIYYAPLHLALGRCYIDLLCTSASSIG Homology
BLAST of CmoCh16G004090 vs. ExPASy Swiss-Prot
Match: A6MN03 (Protein TIC 214 OS=Illicium oligandrum OX=145286 GN=TIC214 PE=3 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 1.9e-26 Identity = 62/89 (69.66%), Postives = 73/89 (82.02%), Query Frame = 0
BLAST of CmoCh16G004090 vs. ExPASy Swiss-Prot
Match: A6MM95 (Protein TIC 214 OS=Buxus microphylla OX=153571 GN=TIC214 PE=3 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 3.2e-26 Identity = 62/89 (69.66%), Postives = 72/89 (80.90%), Query Frame = 0
BLAST of CmoCh16G004090 vs. ExPASy Swiss-Prot
Match: Q09FQ2 (Protein TIC 214 OS=Nandina domestica OX=41776 GN=TIC214 PE=3 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 3.2e-26 Identity = 62/89 (69.66%), Postives = 72/89 (80.90%), Query Frame = 0
BLAST of CmoCh16G004090 vs. ExPASy Swiss-Prot
Match: Q7YJS6 (Protein TIC 214 OS=Calycanthus floridus var. glaucus OX=212734 GN=TIC214 PE=3 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 4.2e-26 Identity = 62/91 (68.13%), Postives = 73/91 (80.22%), Query Frame = 0
BLAST of CmoCh16G004090 vs. ExPASy Swiss-Prot
Match: A0A393 (Protein TIC 214 OS=Coffea arabica OX=13443 GN=TIC214 PE=3 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 4.2e-26 Identity = 62/89 (69.66%), Postives = 71/89 (79.78%), Query Frame = 0
BLAST of CmoCh16G004090 vs. ExPASy TrEMBL
Match: A0A6H0ETK3 (Protein TIC 214 OS=Linnaeosicyos amara OX=386243 GN=ycf1 PE=3 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 1.8e-24 Identity = 63/91 (69.23%), Postives = 73/91 (80.22%), Query Frame = 0
BLAST of CmoCh16G004090 vs. ExPASy TrEMBL
Match: A0A6H0ESD4 (Protein TIC 214 OS=Trichosanthes tubiflora OX=1144424 GN=ycf1 PE=3 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 1.8e-24 Identity = 63/91 (69.23%), Postives = 73/91 (80.22%), Query Frame = 0
BLAST of CmoCh16G004090 vs. ExPASy TrEMBL
Match: A0A6H0EWP9 (Protein TIC 214 OS=Corallocarpus boehmii OX=386154 GN=ycf1 PE=3 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 1.8e-24 Identity = 63/91 (69.23%), Postives = 73/91 (80.22%), Query Frame = 0
BLAST of CmoCh16G004090 vs. ExPASy TrEMBL
Match: A0A6H0EXF7 (Protein TIC 214 OS=Corallocarpus boehmii OX=386154 GN=ycf1 PE=3 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 1.8e-24 Identity = 63/91 (69.23%), Postives = 73/91 (80.22%), Query Frame = 0
BLAST of CmoCh16G004090 vs. ExPASy TrEMBL
Match: A0A6H0ERF2 (Protein TIC 214 OS=Trichosanthes tubiflora OX=1144424 GN=ycf1 PE=3 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 1.8e-24 Identity = 63/91 (69.23%), Postives = 73/91 (80.22%), Query Frame = 0
BLAST of CmoCh16G004090 vs. NCBI nr
Match: YP_009753666.1 (Ycf1 protein [Trichosanthes wallichiana] >QIT04685.1 Ycf1 protein [Trichosanthes wallichiana]) HSP 1 Score: 121.7 bits (304), Expect = 3.8e-24 Identity = 63/91 (69.23%), Postives = 73/91 (80.22%), Query Frame = 0
BLAST of CmoCh16G004090 vs. NCBI nr
Match: YP_009752639.1 (Ycf1 protein [Trichosanthes homophylla] >QIT05035.1 Ycf1 protein [Trichosanthes homophylla] >QIT05120.1 Ycf1 protein [Trichosanthes kirilowii]) HSP 1 Score: 121.7 bits (304), Expect = 3.8e-24 Identity = 63/91 (69.23%), Postives = 73/91 (80.22%), Query Frame = 0
BLAST of CmoCh16G004090 vs. NCBI nr
Match: YP_009752977.1 (Ycf1 protein [Momordica sessilifolia] >QIT06049.1 Ycf1 protein [Momordica sessilifolia]) HSP 1 Score: 121.7 bits (304), Expect = 3.8e-24 Identity = 63/91 (69.23%), Postives = 73/91 (80.22%), Query Frame = 0
BLAST of CmoCh16G004090 vs. NCBI nr
Match: YP_009752373.1 (Ycf1 protein [Bryonia marmorata] >QIT04347.1 Ycf1 protein [Bryonia marmorata]) HSP 1 Score: 121.7 bits (304), Expect = 3.8e-24 Identity = 63/91 (69.23%), Postives = 73/91 (80.22%), Query Frame = 0
BLAST of CmoCh16G004090 vs. NCBI nr
Match: YP_009751879.1 (Ycf1 protein [Indofevillea khasiana] >QIT04612.1 Ycf1 protein [Indofevillea khasiana]) HSP 1 Score: 121.7 bits (304), Expect = 3.8e-24 Identity = 63/91 (69.23%), Postives = 73/91 (80.22%), Query Frame = 0
BLAST of CmoCh16G004090 vs. TAIR 10
Match: ATCG01130.1 (Ycf1 protein ) HSP 1 Score: 111.7 bits (278), Expect = 3.6e-25 Identity = 60/92 (65.22%), Postives = 70/92 (76.09%), Query Frame = 0
BLAST of CmoCh16G004090 vs. TAIR 10
Match: ATCG01000.1 (Ycf1 protein ) HSP 1 Score: 111.7 bits (278), Expect = 3.6e-25 Identity = 60/92 (65.22%), Postives = 70/92 (76.09%), Query Frame = 0
BLAST of CmoCh16G004090 vs. TAIR 10
Match: ATMG00370.1 (Ycf1 protein ) HSP 1 Score: 109.8 bits (273), Expect = 1.4e-24 Identity = 56/68 (82.35%), Postives = 60/68 (88.24%), Query Frame = 0
BLAST of CmoCh16G004090 vs. TAIR 10
Match: AT2G07739.1 (Ycf1 protein ) HSP 1 Score: 107.5 bits (267), Expect = 6.8e-24 Identity = 55/68 (80.88%), Postives = 59/68 (86.76%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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