CmoCh16G003990 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh16G003990
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	basic blue protein-like
Location	Cmo_Chr16: 1841701 .. 1843365 (+)
RNA-Seq Expression	CmoCh16G003990
Synteny	CmoCh16G003990

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTATCATCCATTTTCCCCACTACAATTCAGCAACACTACGCTTTGAAGTCTTTGGCCCTTTGTTTTTGTTTGTTTTCTTGTTGAGCAATGGGTCAGGGAAGGGGCAGTGCGGTGGTGGGTGCGGTGATGGTTTGTATGCTGCTGCTCCAATATTCTCAGGTGGCTCGTGCAGCAGTTTATACTGTTGGAGGTGCTAAAGGCTGGACCTTTAATGTTGCCTCCTGGCCTAAGGGAAAGCGCTTCCGAGCTGGCGATACACTCGGTAATTTTTCGTATTAAGCACTTGAAAAGTTATTCTAAACTAGTTTTAATGTAGTGTTTGGTAGTATTATAGTCGTATGCATTTAATTTGACCCGTCTGAGACGTGTCCCGAGCTGGGACCGTTCTTGTTTTCTAAATGCAATAGAACTTGTATCACAGTTGTCCATAATCCCGAGCTTGAACTTGTGGCTCGTGGAGATTTTTAACACAACAAAACCATATTGAATGTTAGATATTGTCTCTCTTTCCCTTCTGGATTTTTTCCTCGAAGTTTTCAAACGAGTCTAGTACGGGAGAGTTTTTTATACCATTATAACTTCTCACTGTTAGCATATATTGTTTCTTTCCCTTCTCGGTCTTCTCTCAAAGTTTTCAAACGCGTTTAGTAGGTAGAGGTTTTCACACCCTTGTAACTTTATTCCCGTCTCCAACCGATCACTGTTAGCTGATATTACCTCCTCTCCTTTCTGGGTTTTCCCTCAAAGTTTTTAAACCCGTCTAGTAGGAAGAGGTTTTCACACCCTTATAAATTCGTTCCCCTCTCCAACCAACCATAAATATTGCCTTCTTTCCCTCCTCGGTTTCTCTCAAAGTTTTCAAACACTTCTAGTAAAAAGAGGTTTCCACGCCCTTATAACTTTATTCCCTTCTCCAATGGACGTGGGATCTTACAATCCACCCTTCTTGGGAGCCTAGCGTCCTCGTTAGCACACCATCTGGTATCTAGTTTTGATACCATTTATAAAGGCCCGAGTCCACTCCTAGCAGATATTATCATATTTGAACCCTCTTAGACTTTCCCTTAAGATTTCAAAACACGTCTAATAGTGAGAGGTTTACACACTTGATAAGTATTGCTCAGTTCCCCTCTCCAACCGACGTAGAATCTCGGTAACTTTTTGTTATAAGAAACGATTCGTTTTGTGCAGTATTCAACTACAGCCCAGCGGCACACAACGTGGTGGGTGTCAACCGAGTGGGCTACAGCCGGTGCACAACTCCAAGGGGTTCCAAAGTTTTCAAAACAGGAAAGGACCAAATCAAGCTGGTGAAGGGCCAAAACTTCTTCATCTGCACACTCCCAGGCCACTGCCAGGCCGGAATGAAGATAGCCATCACTGCCGCTTAAAAACACCGCCATCTTGCTTGAGAGTCCACCATTTGGATCAAATATTAATGGATTAAGTTACTTAATTTCAAATGGGTTTTGGAGATTATGCCTTAATCCTGTTGAATTTGGTGTCTAATTTAGACTCTCATACAATAATCCTACTAACAATATGAGTATTTTCTAGCTTAAGTGCTTTAAGAATGTTTTGCTTAAATGTACTGTGGAATAAAATTTAATATCTTAGTGTGGTACTTTTTTATATCTATTATTATATTAAGTATTATCGATAAC

mRNA sequence

ATTATCATCCATTTTCCCCACTACAATTCAGCAACACTACGCTTTGAAGTCTTTGGCCCTTTGTTTTTGTTTGTTTTCTTGTTGAGCAATGGGTCAGGGAAGGGGCAGTGCGGTGGTGGGTGCGGTGATGGTTTGTATGCTGCTGCTCCAATATTCTCAGGTGGCTCGTGCAGCAGTTTATACTGTTGGAGGTGCTAAAGGCTGGACCTTTAATGTTGCCTCCTGGCCTAAGGGAAAGCGCTTCCGAGCTGGCGATACACTCGTATTCAACTACAGCCCAGCGGCACACAACGTGGTGGGTGTCAACCGAGTGGGCTACAGCCGGTGCACAACTCCAAGGGGTTCCAAAGTTTTCAAAACAGGAAAGGACCAAATCAAGCTGGTGAAGGGCCAAAACTTCTTCATCTGCACACTCCCAGGCCACTGCCAGGCCGGAATGAAGATAGCCATCACTGCCGCTTAAAAACACCGCCATCTTGCTTGAGAGTCCACCATTTGGATCAAATATTAATGGATTAAGTTACTTAATTTCAAATGGGTTTTGGAGATTATGCCTTAATCCTGTTGAATTTGGTGTCTAATTTAGACTCTCATACAATAATCCTACTAACAATATGAGTATTTTCTAGCTTAAGTGCTTTAAGAATGTTTTGCTTAAATGTACTGTGGAATAAAATTTAATATCTTAGTGTGGTACTTTTTTATATCTATTATTATATTAAGTATTATCGATAAC

Coding sequence (CDS)

ATGGGTCAGGGAAGGGGCAGTGCGGTGGTGGGTGCGGTGATGGTTTGTATGCTGCTGCTCCAATATTCTCAGGTGGCTCGTGCAGCAGTTTATACTGTTGGAGGTGCTAAAGGCTGGACCTTTAATGTTGCCTCCTGGCCTAAGGGAAAGCGCTTCCGAGCTGGCGATACACTCGTATTCAACTACAGCCCAGCGGCACACAACGTGGTGGGTGTCAACCGAGTGGGCTACAGCCGGTGCACAACTCCAAGGGGTTCCAAAGTTTTCAAAACAGGAAAGGACCAAATCAAGCTGGTGAAGGGCCAAAACTTCTTCATCTGCACACTCCCAGGCCACTGCCAGGCCGGAATGAAGATAGCCATCACTGCCGCTTAA

Protein sequence

MGQGRGSAVVGAVMVCMLLLQYSQVARAAVYTVGGAKGWTFNVASWPKGKRFRAGDTLVFNYSPAAHNVVGVNRVGYSRCTTPRGSKVFKTGKDQIKLVKGQNFFICTLPGHCQAGMKIAITAA

Homology

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BLAST of CmoCh16G003990 vs. ExPASy Swiss-Prot
Match: P00303 (Basic blue protein OS=Cucumis sativus OX=3659 PE=1 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 5.2e-36
Identity = 65/95 (68.42%), Postives = 78/95 (82.11%), Query Frame = 0


Query: 29  AVYTVGGAKGWTFNVASWPKGKRFRAGDTLVFNYSPAAHNVVGVNRVGYSRCTTPRGSKV 88
           AVY VGG+ GWTFN  SWPKGKRFRAGD L+FNY+P  HNVV VN+ G+S C TP G+KV
Sbjct: 1   AVYVVGGSGGWTFNTESWPKGKRFRAGDILLFNYNPXMHNVVVVNQGGFSTCNTPAGAKV 60

Query: 89  FKTGKDQIKLVKGQNFFICTLPGHCQAGMKIAITA 124
           + +G+DQIKL KGQ++FIC  PGHCQ+GMKIA+ A
Sbjct: 61  YTSGRDQIKLPKGQSYFICNFPGHCQSGMKIAVNA 95

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BLAST of CmoCh16G003990 vs. ExPASy Swiss-Prot
Match: P60496 (Chemocyanin OS=Lilium longiflorum OX=4690 PE=1 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 2.2e-34
Identity = 72/128 (56.25%), Postives = 88/128 (68.75%), Query Frame = 0


Query: 1   MGQGRGSA----VVGAVMVCMLLLQYSQVARAAVYTVGGAKGWTFNVASWPKGKRFRAGD 60
           M QG GSA    V+G V+V   L+   +VA + VYTVG   GWTF  + WP GK FRAGD
Sbjct: 1   MAQGSGSAERALVLGVVLV--FLVFNCEVAESVVYTVGDGGGWTFGTSGWPAGKTFRAGD 60

Query: 61  TLVFNYSPAAHNVVGVNRVGYSRCTTPRGSKVFKTGKDQIKLVKGQNFFICTLPGHCQAG 120
            LVF Y+PA HNVV V   GY  CT   GS+VFK+G D+I L +G N+FIC++PGHCQ G
Sbjct: 61  VLVFKYNPAVHNVVSVPAGGYKSCTASPGSRVFKSGDDRITLSRGTNYFICSVPGHCQGG 120

Query: 121 MKIAITAA 125
           +KIA+TAA
Sbjct: 121 LKIAVTAA 126

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BLAST of CmoCh16G003990 vs. ExPASy Swiss-Prot
Match: Q8LG89 (Basic blue protein OS=Arabidopsis thaliana OX=3702 GN=ARPN PE=2 SV=2)

HSP 1 Score: 144.4 bits (363), Expect = 8.4e-34
Identity = 72/129 (55.81%), Postives = 88/129 (68.22%), Query Frame = 0


Query: 1   MGQGRGS------AVVGAVMVCMLLLQYSQVARAAVYTVGGAKGWTFNVASWPKGKRFRA 60
           M +GRGS      A+V  + V +LLLQ   V +AA YTVG +  WTFN   WPKGK FRA
Sbjct: 1   MAKGRGSASWSARAIVTLMAVSVLLLQADYV-QAATYTVGDSGIWTFNAVGWPKGKHFRA 60

Query: 61  GDTLVFNYSPAAHNVVGVNRVGYSRCTTPRGSKVFKTGKDQIKLVKGQNFFICTLPGHCQ 120
           GD LVFNY+P  HNVV V+   Y+ C TP G+K + +GKD+I L KGQNFFIC  P HC+
Sbjct: 61  GDVLVFNYNPRMHNVVKVDSGSYNNCKTPTGAKPYTSGKDRITLSKGQNFFICNFPNHCE 120

Query: 121 AGMKIAITA 124
           + MKIA+TA
Sbjct: 121 SDMKIAVTA 128

[Close]

BLAST of CmoCh16G003990 vs. ExPASy Swiss-Prot
Match: G7L0H3 (Blue copper protein 1a OS=Medicago truncatula OX=3880 GN=MTR_7g086140 PE=2 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 1.9e-17
Identity = 53/120 (44.17%), Postives = 70/120 (58.33%), Query Frame = 0


Query: 7   SAVVGAVMVCMLLLQYSQVARAAVYTVGGAKGWT--FNVASWPKGKRFRAGDTLVFNYSP 66
           S VV  + + M+LL  S VA A  + VG  KGWT  F+   W + K FR GD LVFNY P
Sbjct: 4   SRVVLILSISMVLL--SSVAIATDHIVGDDKGWTVDFDYTQWAQDKVFRVGDNLVFNYDP 63

Query: 67  AAHNVVGVNRVGYSRCTTPRGSKVFKTGKDQIKL-VKGQNFFICTLPGHCQA-GMKIAIT 123
           A HNV  VN   +  CT P  ++   TGKD I+L  +G+ +++C +  HC A  MK+ IT
Sbjct: 64  ARHNVFKVNGTLFQSCTFPPKNEALSTGKDIIQLKTEGRKWYVCGVADHCSARQMKLVIT 121

[Close]

BLAST of CmoCh16G003990 vs. ExPASy Swiss-Prot
Match: A0A072U307 (Blue copper protein 1b OS=Medicago truncatula OX=3880 GN=BCP1B PE=2 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 4.2e-17
Identity = 54/121 (44.63%), Postives = 71/121 (58.68%), Query Frame = 0


Query: 7   SAVVGAVMVCMLLLQYSQVARAAV-YTVGGAKGWT--FNVASWPKGKRFRAGDTLVFNYS 66
           S VV  + + M+LL  S VA AA  Y VG  KGWT  F+   W + K FR GD LVFNY 
Sbjct: 4   SRVVLILSISMVLL--SSVAIAATDYIVGDDKGWTVDFDYTQWAQDKVFRVGDNLVFNYD 63

Query: 67  PAAHNVVGVNRVGYSRCTTPRGSKVFKTGKDQIKL-VKGQNFFICTLPGHCQA-GMKIAI 123
           P+ HNV  VN   +  CT P  ++   TGKD I+L  +G+ +++C +  HC A  MK+ I
Sbjct: 64  PSRHNVFKVNGTLFQSCTFPPKNEALSTGKDIIQLKTEGRKWYVCGVADHCSARQMKLVI 122

[Close]

BLAST of CmoCh16G003990 vs. ExPASy TrEMBL
Match: A0A6J1E590 (basic blue protein-like OS=Cucurbita moschata OX=3662 GN=LOC111430872 PE=4 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 5.6e-65
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MGQGRGSAVVGAVMVCMLLLQYSQVARAAVYTVGGAKGWTFNVASWPKGKRFRAGDTLVF 60
           MGQGRGSAVVGAVMVCMLLLQYSQVARAAVYTVGGAKGWTFNVASWPKGKRFRAGDTLVF
Sbjct: 1   MGQGRGSAVVGAVMVCMLLLQYSQVARAAVYTVGGAKGWTFNVASWPKGKRFRAGDTLVF 60

Query: 61  NYSPAAHNVVGVNRVGYSRCTTPRGSKVFKTGKDQIKLVKGQNFFICTLPGHCQAGMKIA 120
           NYSPAAHNVVGVNRVGYSRCTTPRGSKVFKTGKDQIKLVKGQNFFICTLPGHCQAGMKIA
Sbjct: 61  NYSPAAHNVVGVNRVGYSRCTTPRGSKVFKTGKDQIKLVKGQNFFICTLPGHCQAGMKIA 120

Query: 121 ITAA 125
           ITAA
Sbjct: 121 ITAA 124

[Close]

BLAST of CmoCh16G003990 vs. ExPASy TrEMBL
Match: A0A6J1J7W1 (basic blue protein-like OS=Cucurbita maxima OX=3661 GN=LOC111483380 PE=4 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 1.2e-62
Identity = 120/124 (96.77%), Postives = 122/124 (98.39%), Query Frame = 0


Query: 1   MGQGRGSAVVGAVMVCMLLLQYSQVARAAVYTVGGAKGWTFNVASWPKGKRFRAGDTLVF 60
           MGQGRGSAVVGAV+VCMLLLQYSQVARAAVYTVGGAKGWTFNVASWPKGKRFRAGDTLVF
Sbjct: 1   MGQGRGSAVVGAVVVCMLLLQYSQVARAAVYTVGGAKGWTFNVASWPKGKRFRAGDTLVF 60

Query: 61  NYSPAAHNVVGVNRVGYSRCTTPRGSKVFKTGKDQIKLVKGQNFFICTLPGHCQAGMKIA 120
           NYSPAAHNVV VNRVGYSRC TPRGSKVFKTGKD+IKLVKGQNFFICTLPGHCQAGMKIA
Sbjct: 61  NYSPAAHNVVAVNRVGYSRCITPRGSKVFKTGKDRIKLVKGQNFFICTLPGHCQAGMKIA 120

Query: 121 ITAA 125
           ITAA
Sbjct: 121 ITAA 124

[Close]

BLAST of CmoCh16G003990 vs. ExPASy TrEMBL
Match: A0A6J1D6I4 (basic blue protein-like OS=Momordica charantia OX=3673 GN=LOC111017723 PE=4 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 7.3e-57
Identity = 108/123 (87.80%), Postives = 115/123 (93.50%), Query Frame = 0


Query: 1   MGQGRGSAVVGAVMVCMLLLQYSQVARAAVYTVGGAKGWTFNVASWPKGKRFRAGDTLVF 60
           M +GRGSAVVGAVM C+LLLQYS++ARAAVYTVGGA GWTFN A+WP GKRFRAGDTLVF
Sbjct: 1   MAKGRGSAVVGAVMACLLLLQYSEMARAAVYTVGGAPGWTFNSAAWPNGKRFRAGDTLVF 60

Query: 61  NYSPAAHNVVGVNRVGYSRCTTPRGSKVFKTGKDQIKLVKGQNFFICTLPGHCQAGMKIA 120
           NYSPAAHNVV VN+VGYSRC TPRGSKVF+TGKDQIKLVKGQNFFIC LPGHCQAGMKIA
Sbjct: 61  NYSPAAHNVVAVNKVGYSRCITPRGSKVFRTGKDQIKLVKGQNFFICNLPGHCQAGMKIA 120

Query: 121 ITA 124
           ITA
Sbjct: 121 ITA 123

[Close]

BLAST of CmoCh16G003990 vs. ExPASy TrEMBL
Match: A0A5A7T871 (Basic blue protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold252G00010 PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 2.8e-56
Identity = 108/124 (87.10%), Postives = 118/124 (95.16%), Query Frame = 0


Query: 1   MGQGRGSAVVGAVMVCMLL-LQYSQVARAAVYTVGGAKGWTFNVASWPKGKRFRAGDTLV 60
           MG+GRGSA+V  VMVC+LL LQYSQ+A AAVYTVGGA+GWTFNVASWPKGKRFRAGDTLV
Sbjct: 1   MGEGRGSAMVCVVMVCVLLMLQYSQMAHAAVYTVGGAQGWTFNVASWPKGKRFRAGDTLV 60

Query: 61  FNYSPAAHNVVGVNRVGYSRCTTPRGSKVFKTGKDQIKLVKGQNFFICTLPGHCQAGMKI 120
           FNYSP+AHNVVGVNR+GYSRCTTPRGSKVF+TGKDQIKLVKGQNFFIC+LPGHCQ GMKI
Sbjct: 61  FNYSPSAHNVVGVNRLGYSRCTTPRGSKVFQTGKDQIKLVKGQNFFICSLPGHCQGGMKI 120

Query: 121 AITA 124
           A+ A
Sbjct: 121 AVNA 124

[Close]

BLAST of CmoCh16G003990 vs. ExPASy TrEMBL
Match: A0A1S3CPL7 (basic blue protein-like OS=Cucumis melo OX=3656 GN=LOC103503230 PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 2.8e-56
Identity = 108/124 (87.10%), Postives = 118/124 (95.16%), Query Frame = 0


Query: 1   MGQGRGSAVVGAVMVCMLL-LQYSQVARAAVYTVGGAKGWTFNVASWPKGKRFRAGDTLV 60
           MG+GRGSA+V  VMVC+LL LQYSQ+A AAVYTVGGA+GWTFNVASWPKGKRFRAGDTLV
Sbjct: 1   MGEGRGSAMVCVVMVCVLLMLQYSQMAHAAVYTVGGAQGWTFNVASWPKGKRFRAGDTLV 60

Query: 61  FNYSPAAHNVVGVNRVGYSRCTTPRGSKVFKTGKDQIKLVKGQNFFICTLPGHCQAGMKI 120
           FNYSP+AHNVVGVNR+GYSRCTTPRGSKVF+TGKDQIKLVKGQNFFIC+LPGHCQ GMKI
Sbjct: 61  FNYSPSAHNVVGVNRLGYSRCTTPRGSKVFQTGKDQIKLVKGQNFFICSLPGHCQGGMKI 120

Query: 121 AITA 124
           A+ A
Sbjct: 121 AVNA 124

[Close]

BLAST of CmoCh16G003990 vs. NCBI nr
Match: XP_022923107.1 (basic blue protein-like [Cucurbita moschata])

HSP 1 Score: 256.5 bits (654), Expect = 1.2e-64
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MGQGRGSAVVGAVMVCMLLLQYSQVARAAVYTVGGAKGWTFNVASWPKGKRFRAGDTLVF 60
           MGQGRGSAVVGAVMVCMLLLQYSQVARAAVYTVGGAKGWTFNVASWPKGKRFRAGDTLVF
Sbjct: 1   MGQGRGSAVVGAVMVCMLLLQYSQVARAAVYTVGGAKGWTFNVASWPKGKRFRAGDTLVF 60

Query: 61  NYSPAAHNVVGVNRVGYSRCTTPRGSKVFKTGKDQIKLVKGQNFFICTLPGHCQAGMKIA 120
           NYSPAAHNVVGVNRVGYSRCTTPRGSKVFKTGKDQIKLVKGQNFFICTLPGHCQAGMKIA
Sbjct: 61  NYSPAAHNVVGVNRVGYSRCTTPRGSKVFKTGKDQIKLVKGQNFFICTLPGHCQAGMKIA 120

Query: 121 ITAA 125
           ITAA
Sbjct: 121 ITAA 124

[Close]

BLAST of CmoCh16G003990 vs. NCBI nr
Match: KAG7014990.1 (hypothetical protein SDJN02_22621, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 254.6 bits (649), Expect = 4.4e-64
Identity = 122/124 (98.39%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MGQGRGSAVVGAVMVCMLLLQYSQVARAAVYTVGGAKGWTFNVASWPKGKRFRAGDTLVF 60
           MGQGRGSAVVGAV+VCMLLLQYSQVARAAVYTVGGAKGWTFNVASWPKGKRFRAGDTLVF
Sbjct: 1   MGQGRGSAVVGAVVVCMLLLQYSQVARAAVYTVGGAKGWTFNVASWPKGKRFRAGDTLVF 60

Query: 61  NYSPAAHNVVGVNRVGYSRCTTPRGSKVFKTGKDQIKLVKGQNFFICTLPGHCQAGMKIA 120
           NYSPAAHNVVGVNRVGYSRCTTPRGSKVFKTGKDQ+KLVKGQNFFICTLPGHCQAGMKIA
Sbjct: 61  NYSPAAHNVVGVNRVGYSRCTTPRGSKVFKTGKDQVKLVKGQNFFICTLPGHCQAGMKIA 120

Query: 121 ITAA 125
           ITAA
Sbjct: 121 ITAA 124

[Close]

BLAST of CmoCh16G003990 vs. NCBI nr
Match: KAG6576969.1 (hypothetical protein SDJN03_24543, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 254.2 bits (648), Expect = 5.7e-64
Identity = 123/124 (99.19%), Postives = 123/124 (99.19%), Query Frame = 0


Query: 1   MGQGRGSAVVGAVMVCMLLLQYSQVARAAVYTVGGAKGWTFNVASWPKGKRFRAGDTLVF 60
           MGQGRGSAVVGAVMVC LLLQYSQVARAAVYTVGGAKGWTFNVASWPKGKRFRAGDTLVF
Sbjct: 1   MGQGRGSAVVGAVMVCTLLLQYSQVARAAVYTVGGAKGWTFNVASWPKGKRFRAGDTLVF 60

Query: 61  NYSPAAHNVVGVNRVGYSRCTTPRGSKVFKTGKDQIKLVKGQNFFICTLPGHCQAGMKIA 120
           NYSPAAHNVVGVNRVGYSRCTTPRGSKVFKTGKDQIKLVKGQNFFICTLPGHCQAGMKIA
Sbjct: 61  NYSPAAHNVVGVNRVGYSRCTTPRGSKVFKTGKDQIKLVKGQNFFICTLPGHCQAGMKIA 120

Query: 121 ITAA 125
           ITAA
Sbjct: 121 ITAA 124

[Close]

BLAST of CmoCh16G003990 vs. NCBI nr
Match: XP_023553060.1 (basic blue protein-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 252.7 bits (644), Expect = 1.7e-63
Identity = 122/124 (98.39%), Postives = 123/124 (99.19%), Query Frame = 0


Query: 1   MGQGRGSAVVGAVMVCMLLLQYSQVARAAVYTVGGAKGWTFNVASWPKGKRFRAGDTLVF 60
           MGQGRGSAVVGAVMVC+LLLQYSQVARAAVYTVGGAKGWTFNVASWPKGKRFRAGDTLVF
Sbjct: 1   MGQGRGSAVVGAVMVCVLLLQYSQVARAAVYTVGGAKGWTFNVASWPKGKRFRAGDTLVF 60

Query: 61  NYSPAAHNVVGVNRVGYSRCTTPRGSKVFKTGKDQIKLVKGQNFFICTLPGHCQAGMKIA 120
           NYSPAAHNVV VNRVGYSRCTTPRGSKVFKTGKDQIKLVKGQNFFICTLPGHCQAGMKIA
Sbjct: 61  NYSPAAHNVVAVNRVGYSRCTTPRGSKVFKTGKDQIKLVKGQNFFICTLPGHCQAGMKIA 120

Query: 121 ITAA 125
           ITAA
Sbjct: 121 ITAA 124

[Close]

BLAST of CmoCh16G003990 vs. NCBI nr
Match: XP_022985341.1 (basic blue protein-like [Cucurbita maxima])

HSP 1 Score: 248.8 bits (634), Expect = 2.4e-62
Identity = 120/124 (96.77%), Postives = 122/124 (98.39%), Query Frame = 0


Query: 1   MGQGRGSAVVGAVMVCMLLLQYSQVARAAVYTVGGAKGWTFNVASWPKGKRFRAGDTLVF 60
           MGQGRGSAVVGAV+VCMLLLQYSQVARAAVYTVGGAKGWTFNVASWPKGKRFRAGDTLVF
Sbjct: 1   MGQGRGSAVVGAVVVCMLLLQYSQVARAAVYTVGGAKGWTFNVASWPKGKRFRAGDTLVF 60

Query: 61  NYSPAAHNVVGVNRVGYSRCTTPRGSKVFKTGKDQIKLVKGQNFFICTLPGHCQAGMKIA 120
           NYSPAAHNVV VNRVGYSRC TPRGSKVFKTGKD+IKLVKGQNFFICTLPGHCQAGMKIA
Sbjct: 61  NYSPAAHNVVAVNRVGYSRCITPRGSKVFKTGKDRIKLVKGQNFFICTLPGHCQAGMKIA 120

Query: 121 ITAA 125
           ITAA
Sbjct: 121 ITAA 124

[Close]

BLAST of CmoCh16G003990 vs. TAIR 10
Match: AT2G02850.1 (plantacyanin )

HSP 1 Score: 144.4 bits (363), Expect = 6.0e-35
Identity = 72/129 (55.81%), Postives = 88/129 (68.22%), Query Frame = 0


Query: 1   MGQGRGS------AVVGAVMVCMLLLQYSQVARAAVYTVGGAKGWTFNVASWPKGKRFRA 60
           M +GRGS      A+V  + V +LLLQ   V +AA YTVG +  WTFN   WPKGK FRA
Sbjct: 1   MAKGRGSASWSARAIVTLMAVSVLLLQADYV-QAATYTVGDSGIWTFNAVGWPKGKHFRA 60

Query: 61  GDTLVFNYSPAAHNVVGVNRVGYSRCTTPRGSKVFKTGKDQIKLVKGQNFFICTLPGHCQ 120
           GD LVFNY+P  HNVV V+   Y+ C TP G+K + +GKD+I L KGQNFFIC  P HC+
Sbjct: 61  GDVLVFNYNPRMHNVVKVDSGSYNNCKTPTGAKPYTSGKDRITLSKGQNFFICNFPNHCE 120

Query: 121 AGMKIAITA 124
           + MKIA+TA
Sbjct: 121 SDMKIAVTA 128

[Close]

BLAST of CmoCh16G003990 vs. TAIR 10
Match: AT5G26330.1 (Cupredoxin superfamily protein )

HSP 1 Score: 89.7 bits (221), Expect = 1.7e-18
Identity = 45/118 (38.14%), Postives = 66/118 (55.93%), Query Frame = 0


Query: 7   SAVVGAVMVCMLLLQYSQVARAAVYTVGGAKGWT----FNVASWPKGKRFRAGDTLVFNY 66
           +A++ A + C++++   +++ AAVY VG + GWT     +   W   K F  GDT++F Y
Sbjct: 2   AAIIVAALACIVVM--LRLSEAAVYKVGDSAGWTTIANVDYKLWASTKTFHIGDTVLFEY 61

Query: 67  SPAAHNVVGVNRVGYSRCTTPRGSKVFKTGKDQIKLVK-GQNFFICTLPGHCQAGMKI 120
           +P  HNV+ V    Y  C T +    F TG D I L   G +FF C +PGHC AG K+
Sbjct: 62  NPQFHNVMRVTHPMYRSCNTSKPISTFTTGNDSITLTNHGHHFFFCGVPGHCLAGQKL 117

[Close]

BLAST of CmoCh16G003990 vs. TAIR 10
Match: AT3G60270.1 (Cupredoxin superfamily protein )

HSP 1 Score: 86.3 bits (212), Expect = 1.9e-17
Identity = 49/119 (41.18%), Postives = 64/119 (53.78%), Query Frame = 0


Query: 6   GSAVVGAVMVCMLLLQYSQVARAAVYTVGGAKGWTFNV--ASWPKGKRFRAGDTLVFNYS 65
           GS    A+++ +LL+    V  A  + VG   GWT  V   SW   K FR GDTL F Y 
Sbjct: 2   GSTAATALLLLLLLVAVPAVF-AVTFQVGDNDGWTIGVEYTSWVSEKTFRVGDTLEFKYG 61

Query: 66  PAAHNVVGVNRVGYSRCTTPRGSKVFKTGKDQIKLVK-GQNFFICTLPGHCQAGMKIAI 122
           P +H+V  VN+  Y  C T R ++ F  G  +I L K G   F+C  PGHC  GMK+A+
Sbjct: 62  P-SHSVAVVNKADYDGCETSRPTQSFSDGDTKIDLTKVGAIHFLCLTPGHCSLGMKLAV 118

[Close]

BLAST of CmoCh16G003990 vs. TAIR 10
Match: AT2G26720.1 (Cupredoxin superfamily protein )

HSP 1 Score: 79.0 bits (193), Expect = 3.1e-15
Identity = 38/96 (39.58%), Postives = 53/96 (55.21%), Query Frame = 0


Query: 30  VYTVGGAKGWTF---NVASWPKGKRFRAGDTLVFNYSPAAHNVVGVNRVGYSRCTTPRGS 89
           V+ VG  KGWT    +  +W   + F+ GDTLVF Y+   H+V  V    +  C + +  
Sbjct: 28  VHKVGNTKGWTMIGGDYEAWASSRVFQVGDTLVFAYNKDYHDVTEVTHNDFEMCESSKPL 87

Query: 90  KVFKTGKDQIKLVK-GQNFFICTLPGHCQAGMKIAI 122
           + +KTG D I L K G   FIC +PGHC+ G K+ I
Sbjct: 88  RRYKTGSDSISLTKPGLQHFICGVPGHCKKGQKLQI 123

[Close]

BLAST of CmoCh16G003990 vs. TAIR 10
Match: AT2G32300.1 (uclacyanin 1 )

HSP 1 Score: 77.8 bits (190), Expect = 6.8e-15
Identity = 37/112 (33.04%), Postives = 59/112 (52.68%), Query Frame = 0


Query: 13  VMVCMLLLQYSQVARAAVYTVGGAKGWTF--NVASWPKGKRFRAGDTLVFNYSPAAHNVV 72
           +++ +L      +  A  +T+GG  GWT   ++ +W  G+ F  GD LVF+Y  A H+VV
Sbjct: 8   IIISVLATTLIGLTVATDHTIGGPSGWTVGASLRTWAAGQTFAVGDNLVFSYPAAFHDVV 67

Query: 73  GVNRVGYSRCTTPRGSKVFKTGKDQIKL-VKGQNFFICTLPGHCQAGMKIAI 122
            V +  +  C   +    F  G   + L   G+ +FIC +PGHC  GMK+ +
Sbjct: 68  EVTKPEFDSCQAVKPLITFANGNSLVPLTTPGKRYFICGMPGHCSQGMKLEV 119

The following BLAST results are available for this feature:

BLAST of CmoCh16G003990 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P00303	5.2e-36	68.42	Basic blue protein OS=Cucumis sativus OX=3659 PE=1 SV=1	[more]
P60496	2.2e-34	56.25	Chemocyanin OS=Lilium longiflorum OX=4690 PE=1 SV=1	[more]
Q8LG89	8.4e-34	55.81	Basic blue protein OS=Arabidopsis thaliana OX=3702 GN=ARPN PE=2 SV=2	[more]
G7L0H3	1.9e-17	44.17	Blue copper protein 1a OS=Medicago truncatula OX=3880 GN=MTR_7g086140 PE=2 SV=1	[more]
A0A072U307	4.2e-17	44.63	Blue copper protein 1b OS=Medicago truncatula OX=3880 GN=BCP1B PE=2 SV=1	[more]

BLAST of CmoCh16G003990 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E590	5.6e-65	100.00	basic blue protein-like OS=Cucurbita moschata OX=3662 GN=LOC111430872 PE=4 SV=1	[more]
A0A6J1J7W1	1.2e-62	96.77	basic blue protein-like OS=Cucurbita maxima OX=3661 GN=LOC111483380 PE=4 SV=1	[more]
A0A6J1D6I4	7.3e-57	87.80	basic blue protein-like OS=Momordica charantia OX=3673 GN=LOC111017723 PE=4 SV=1	[more]
A0A5A7T871	2.8e-56	87.10	Basic blue protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CPL7	2.8e-56	87.10	basic blue protein-like OS=Cucumis melo OX=3656 GN=LOC103503230 PE=4 SV=1	[more]

BLAST of CmoCh16G003990 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022923107.1	1.2e-64	100.00	basic blue protein-like [Cucurbita moschata]	[more]
KAG7014990.1	4.4e-64	98.39	hypothetical protein SDJN02_22621, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6576969.1	5.7e-64	99.19	hypothetical protein SDJN03_24543, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023553060.1	1.7e-63	98.39	basic blue protein-like [Cucurbita pepo subsp. pepo]	[more]
XP_022985341.1	2.4e-62	96.77	basic blue protein-like [Cucurbita maxima]	[more]

BLAST of CmoCh16G003990 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G02850.1	6.0e-35	55.81	plantacyanin	[more]
AT5G26330.1	1.7e-18	38.14	Cupredoxin superfamily protein	[more]
AT3G60270.1	1.9e-17	41.18	Cupredoxin superfamily protein	[more]
AT2G26720.1	3.1e-15	39.58	Cupredoxin superfamily protein	[more]
AT2G32300.1	6.8e-15	33.04	uclacyanin 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008972	Cupredoxin	GENE3D	2.60.40.420		coord: 29..123 e-value: 4.0E-32 score: 112.3
IPR008972	Cupredoxin	SUPERFAMILY	49503	Cupredoxins	coord: 29..123
IPR003245	Phytocyanin domain	PFAM	PF02298	Cu_bind_like	coord: 39..117 e-value: 4.4E-25 score: 87.5
IPR003245	Phytocyanin domain	PROSITE	PS51485	PHYTOCYANIN	coord: 29..124 score: 35.976257
IPR039391	Phytocyanin	PANTHER	PTHR33021	BLUE COPPER PROTEIN	coord: 9..122
None	No IPR available	PANTHER	PTHR33021:SF345	BASIC BLUE-LIKE PROTEIN	coord: 9..122
IPR041844	Plantacyanin	CDD	cd11013	Plantacyanin	coord: 29..123 e-value: 4.24253E-51 score: 155.205

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh16G003990.1	CmoCh16G003990.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
cellular_component	GO:0046658	anchored component of plasma membrane
molecular_function	GO:0009055	electron transfer activity