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CmoCh16G003410 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGATGAACAAGAAGGTTGCTTTGCTGGTTATGGTGGTTCTGGCGGCGGTTATGGCTCAATCCGCGGCCGTGGATGAGGCGATTCAGCTGCCGTCGGAGGGCGGAGCAGGTTGTTACGACACACCGCCCCCTCCAAGAGTATGTCCGGTTATGATATTGCCGTGTAAAACTGACTCTGAGTGCTCTCCATGTTACTGTGTTAATGGCTCCTGCGTTTGATGAGCAAAAACAAAAGGAAGAAGGAAAAGATTGTCATTAAGCACTGTTGCGTTGTTGTTTGTTCTTTTCCTTTTTTTTCTATGTTCTAATAAAAAAAACTTCCCTTTTCATCACTTTTTGTCTTGCAAAATTAATCTCTCTCTATTTTTTTGGTGTTCATGTGATTACACGAGATTCTACGCCCGTTAGAGAAGAGAACGAAGTATTTTTTTATAAGGGTGTGGAAACATCTCACTAGTGTACGCGTTTTGTAATTGTGGAGCTCACTACAAGCTAAAATAGATAATAACAGCTAGCTACAAATTTAATGACCCATCTCACTAGTATACGCGTTTTGTAATTGTGGAGCTGACTACAACCTAAAACAGACAATAACAGCTAGCTACAGATTCAATGACCCATCTCACTAGTATACGCGTTTTGTAATTGTGGAGCTGAATACAAGCTAAAACAGATAATAACAGCTAGCTACAAATTCAATGACTCGAATAATTTGAATCACCTAATCCAAACAATAAGTGTTGTGTTGGGTTGGGTTTTTTTTGGTTTGGATTGGGATGAATTTTTTGAAAATCGAAAAATTTGGTATGGTTTGGTTCACGGGTTGGAACGTATTTGATCGAGTCAACCTGACCCACTAGAAAATAGGATTTACAATCCAACTCAACCCTACAGTACTTTTTAAATTGTTATGAATATTAAGAGGATTTTAGTTATTAATGTAACATGTATTATGAATAATATGGTTTTTTTAAAATAATTAAAAAAATGAACAATTGGACGATACAACCCGACTAAAAAATAAAGGGTTGAGTTAGGTTAGGTTATAAACCCTACTCGAGTCATTCGTGTCACCGACCTACAATTCTACGTGGGTTTGTGACGAATAAGCTAAGTGACCAATAAAGTAACGAAATTGATAAGGGTGAGGACGCGATTAGAGACTTTTTGTTACGTTGAAAGCATGAATATTCATTAATGGCTGCTGCTCTGTGCTATAAATACAAGGCTTGGGAGAGCAAATAAAACCATACAATTGCTGTTGGGAAATAGAGAGAGATCATATGGAGATGAAAAACAAGGTTGGTTTGGTGGCTATGGTGGTTGTGATGGTGGTTATGGCTCACTCCGCCACCACCATCGCCGCCGTGGATGAGCCCATTCAGGTCCCAACCAACGGCGGAGGAAGTGAATCCGATACACCCAGGGTGTGCCCGGCTACACTTTTGCCATGCAAAACTGACTCTGAGTGCTCTCCATGCAACTGTGTCAATGGCTCCTGCGTTTGA ATGGAGATGAACAAGAAGGTTGCTTTGCTGGTTATGGTGGTTCTGGCGGCGGTTATGGCTCAATCCGCGGCCGTGGATGAGGCGATTCAGCTGCCGTCGGAGGGCGGAGCAGGTTGTTACGACACACCGCCCCCTCCAAGAGTATGTCCGGTTATGATATTGCCGTGTAAAACTGACTCTGAGTGCTCTCCATGTTACTGTGTTAATGGCTCCTGCAGAGATCATATGGAGATGAAAAACAAGGTTGGTTTGGTGGCTATGGTGGTTGTGATGGTGGTTATGGCTCACTCCGCCACCACCATCGCCGCCGTGGATGAGCCCATTCAGGTCCCAACCAACGGCGGAGGAAGTGAATCCGATACACCCAGGGTGTGCCCGGCTACACTTTTGCCATGCAAAACTGACTCTGAGTGCTCTCCATGCAACTGTGTCAATGGCTCCTGCGTTTGA ATGGAGATGAACAAGAAGGTTGCTTTGCTGGTTATGGTGGTTCTGGCGGCGGTTATGGCTCAATCCGCGGCCGTGGATGAGGCGATTCAGCTGCCGTCGGAGGGCGGAGCAGGTTGTTACGACACACCGCCCCCTCCAAGAGTATGTCCGGTTATGATATTGCCGTGTAAAACTGACTCTGAGTGCTCTCCATGTTACTGTGTTAATGGCTCCTGCAGAGATCATATGGAGATGAAAAACAAGGTTGGTTTGGTGGCTATGGTGGTTGTGATGGTGGTTATGGCTCACTCCGCCACCACCATCGCCGCCGTGGATGAGCCCATTCAGGTCCCAACCAACGGCGGAGGAAGTGAATCCGATACACCCAGGGTGTGCCCGGCTACACTTTTGCCATGCAAAACTGACTCTGAGTGCTCTCCATGCAACTGTGTCAATGGCTCCTGCGTTTGA MEMNKKVALLVMVVLAAVMAQSAAVDEAIQLPSEGGAGCYDTPPPPRVCPVMILPCKTDSECSPCYCVNGSCRDHMEMKNKVGLVAMVVVMVVMAHSATTIAAVDEPIQVPTNGGGSESDTPRVCPATLLPCKTDSECSPCNCVNGSCV Homology
BLAST of CmoCh16G003410 vs. ExPASy TrEMBL
Match: A0A0A0KY39 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000850 PE=4 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 1.1e-19 Identity = 53/76 (69.74%), Postives = 60/76 (78.95%), Query Frame = 0
BLAST of CmoCh16G003410 vs. ExPASy TrEMBL
Match: A0A5D3E1Q5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G00670 PE=4 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 7.8e-13 Identity = 51/76 (67.11%), Postives = 57/76 (75.00%), Query Frame = 0
BLAST of CmoCh16G003410 vs. ExPASy TrEMBL
Match: A0A5A7TRY5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G00670 PE=4 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 1.7e-12 Identity = 50/76 (65.79%), Postives = 57/76 (75.00%), Query Frame = 0
BLAST of CmoCh16G003410 vs. ExPASy TrEMBL
Match: A0A0A0KWE9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000860 PE=4 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 5.0e-12 Identity = 50/76 (65.79%), Postives = 57/76 (75.00%), Query Frame = 0
BLAST of CmoCh16G003410 vs. NCBI nr
Match: KGN52766.1 (hypothetical protein Csa_015422 [Cucumis sativus]) HSP 1 Score: 106.3 bits (264), Expect = 2.3e-19 Identity = 53/76 (69.74%), Postives = 60/76 (78.95%), Query Frame = 0
BLAST of CmoCh16G003410 vs. NCBI nr
Match: TYK29470.1 (hypothetical protein E5676_scaffold655G00670 [Cucumis melo var. makuwa]) HSP 1 Score: 83.6 bits (205), Expect = 1.6e-12 Identity = 51/76 (67.11%), Postives = 57/76 (75.00%), Query Frame = 0
BLAST of CmoCh16G003410 vs. NCBI nr
Match: KAA0044341.1 (hypothetical protein E6C27_scaffold46G00670 [Cucumis melo var. makuwa]) HSP 1 Score: 82.4 bits (202), Expect = 3.6e-12 Identity = 50/76 (65.79%), Postives = 57/76 (75.00%), Query Frame = 0
BLAST of CmoCh16G003410 vs. NCBI nr
Match: KGN52767.1 (hypothetical protein Csa_015168 [Cucumis sativus]) HSP 1 Score: 80.9 bits (198), Expect = 1.0e-11 Identity = 50/76 (65.79%), Postives = 57/76 (75.00%), Query Frame = 0
BLAST of CmoCh16G003410 vs. NCBI nr
Match: KAG6576915.1 (hypothetical protein SDJN03_24489, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 59.3 bits (142), Expect = 3.2e-05 Identity = 58/166 (34.94%), Postives = 84/166 (50.60%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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