Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGTTCGCAATCAATCTTCGTTTTCCTAGCGTCCATGGCCAGATCCACAATTTCCAATTTCAATCTTGGCCGTCGCCGGCCCTTTCTAGGAGTCGGCTGCCATGCCAGATCACCTACTGCAGAAAGAAATTCAGCGACGCGGATCTCGCCTCCGATCTCGCTATGGAAGTGGCGAAAATCAACACCAATTTGATTCAGGGAGAGGAGGCGATGACGAAGAGCAGAGAAATTTTGTTCACAGAGCTCTGCGGATTTCTAGGGCTTAAATCGGAGGAGACGAAGAGATGCTGGAAGAAGATGGACGAGGAGGCGAAATTGACATTGATTAAAGAGTTTGTGTCCGAGTGGGGGTTCAATTTCCAACCATTGTCGCCTAGGTCTGCGAAGGAAATGGTGGAAGAATACGTTATTAATGGAGAAAATTCGCCTGCAATTTCTTCTGCTTCGTCGTTGATTTCTTCGTTGAAGAAATCGATTGGATTGTGA
mRNA sequence
ATGATGTTCGCAATCAATCTTCGTTTTCCTAGCGTCCATGGCCAGATCCACAATTTCCAATTTCAATCTTGGCCGTCGCCGGCCCTTTCTAGGAGTCGGCTGCCATGCCAGATCACCTACTGCAGAAAGAAATTCAGCGACGCGGATCTCGCCTCCGATCTCGCTATGGAAGTGGCGAAAATCAACACCAATTTGATTCAGGGAGAGGAGGCGATGACGAAGAGCAGAGAAATTTTGTTCACAGAGCTCTGCGGATTTCTAGGGCTTAAATCGGAGGAGACGAAGAGATGCTGGAAGAAGATGGACGAGGAGGCGAAATTGACATTGATTAAAGAGTTTGTGTCCGAGTGGGGGTTCAATTTCCAACCATTGTCGCCTAGGTCTGCGAAGGAAATGGTGGAAGAATACGTTATTAATGGAGAAAATTCGCCTGCAATTTCTTCTGCTTCGTCGTTGATTTCTTCGTTGAAGAAATCGATTGGATTGTGA
Coding sequence (CDS)
ATGATGTTCGCAATCAATCTTCGTTTTCCTAGCGTCCATGGCCAGATCCACAATTTCCAATTTCAATCTTGGCCGTCGCCGGCCCTTTCTAGGAGTCGGCTGCCATGCCAGATCACCTACTGCAGAAAGAAATTCAGCGACGCGGATCTCGCCTCCGATCTCGCTATGGAAGTGGCGAAAATCAACACCAATTTGATTCAGGGAGAGGAGGCGATGACGAAGAGCAGAGAAATTTTGTTCACAGAGCTCTGCGGATTTCTAGGGCTTAAATCGGAGGAGACGAAGAGATGCTGGAAGAAGATGGACGAGGAGGCGAAATTGACATTGATTAAAGAGTTTGTGTCCGAGTGGGGGTTCAATTTCCAACCATTGTCGCCTAGGTCTGCGAAGGAAATGGTGGAAGAATACGTTATTAATGGAGAAAATTCGCCTGCAATTTCTTCTGCTTCGTCGTTGATTTCTTCGTTGAAGAAATCGATTGGATTGTGA
Protein sequence
MMFAINLRFPSVHGQIHNFQFQSWPSPALSRSRLPCQITYCRKKFSDADLASDLAMEVAKINTNLIQGEEAMTKSREILFTELCGFLGLKSEETKRCWKKMDEEAKLTLIKEFVSEWGFNFQPLSPRSAKEMVEEYVINGENSPAISSASSLISSLKKSIGL
Homology
BLAST of CmoCh16G003090 vs. ExPASy TrEMBL
Match:
A0A6J1E4R4 (uncharacterized protein LOC111430603 OS=Cucurbita moschata OX=3662 GN=LOC111430603 PE=4 SV=1)
HSP 1 Score: 324.3 bits (830), Expect = 2.9e-85
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0
Query: 1 MMFAINLRFPSVHGQIHNFQFQSWPSPALSRSRLPCQITYCRKKFSDADLASDLAMEVAK 60
MMFAINLRFPSVHGQIHNFQFQSWPSPALSRSRLPCQITYCRKKFSDADLASDLAMEVAK
Sbjct: 1 MMFAINLRFPSVHGQIHNFQFQSWPSPALSRSRLPCQITYCRKKFSDADLASDLAMEVAK 60
Query: 61 INTNLIQGEEAMTKSREILFTELCGFLGLKSEETKRCWKKMDEEAKLTLIKEFVSEWGFN 120
INTNLIQGEEAMTKSREILFTELCGFLGLKSEETKRCWKKMDEEAKLTLIKEFVSEWGFN
Sbjct: 61 INTNLIQGEEAMTKSREILFTELCGFLGLKSEETKRCWKKMDEEAKLTLIKEFVSEWGFN 120
Query: 121 FQPLSPRSAKEMVEEYVINGENSPAISSASSLISSLKKSIGL 163
FQPLSPRSAKEMVEEYVINGENSPAISSASSLISSLKKSIGL
Sbjct: 121 FQPLSPRSAKEMVEEYVINGENSPAISSASSLISSLKKSIGL 162
BLAST of CmoCh16G003090 vs. ExPASy TrEMBL
Match:
A0A6J1J388 (uncharacterized protein LOC111482994 OS=Cucurbita maxima OX=3661 GN=LOC111482994 PE=4 SV=1)
HSP 1 Score: 311.6 bits (797), Expect = 1.9e-81
Identity = 155/162 (95.68%), Postives = 158/162 (97.53%), Query Frame = 0
Query: 1 MMFAINLRFPSVHGQIHNFQFQSWPSPALSRSRLPCQITYCRKKFSDADLASDLAMEVAK 60
M+FAINLRFP VHGQIHNFQFQSWPS ALSRSRLPCQITYCRKKFSDADLASDLAMEVAK
Sbjct: 1 MIFAINLRFPRVHGQIHNFQFQSWPSSALSRSRLPCQITYCRKKFSDADLASDLAMEVAK 60
Query: 61 INTNLIQGEEAMTKSREILFTELCGFLGLKSEETKRCWKKMDEEAKLTLIKEFVSEWGFN 120
INTNLIQGEEAMTKSREILFT+LCGFL LKSEETKRCWKKMDEEAKLTL+KEFVSEWGFN
Sbjct: 61 INTNLIQGEEAMTKSREILFTDLCGFLELKSEETKRCWKKMDEEAKLTLVKEFVSEWGFN 120
Query: 121 FQPLSPRSAKEMVEEYVINGENSPAISSASSLISSLKKSIGL 163
FQPLSPRS KEMVEEYVINGENSPAISSASSLISSLKKSIGL
Sbjct: 121 FQPLSPRSVKEMVEEYVINGENSPAISSASSLISSLKKSIGL 162
BLAST of CmoCh16G003090 vs. ExPASy TrEMBL
Match:
A0A6J1D577 (uncharacterized protein LOC111017712 OS=Momordica charantia OX=3673 GN=LOC111017712 PE=4 SV=1)
HSP 1 Score: 241.1 bits (614), Expect = 3.2e-60
Identity = 125/163 (76.69%), Postives = 141/163 (86.50%), Query Frame = 0
Query: 1 MMFAINL-RFPSVHGQIHNFQFQSWPSPALSRSRLPCQITYCRKKFSDADLASDLAMEVA 60
M+FAINL R P +IH+F+FQS PSPALSR+RLPCQI+YC KK SDA+LASDLA EVA
Sbjct: 1 MIFAINLFRLPHGRSEIHSFRFQSPPSPALSRNRLPCQISYCIKKLSDAELASDLATEVA 60
Query: 61 KINTNLIQGEEAMTKSREILFTELCGFLGLKSEETKRCWKKMDEEAKLTLIKEFVSEWGF 120
K++TNLIQ EEAM KS+E LFTELCGFLGLKSEETK+ WKKMDEEAKL L+KEFV+EWGF
Sbjct: 61 KMSTNLIQREEAMKKSKEFLFTELCGFLGLKSEETKKSWKKMDEEAKLALVKEFVTEWGF 120
Query: 121 NFQPLSPRSAKEMVEEYVINGENSPAISSASSLISSLKKSIGL 163
NFQPLSPRS KE+VEEYV NGEN AISSA SLI SLK+ +GL
Sbjct: 121 NFQPLSPRSVKELVEEYV-NGENISAISSAPSLIPSLKRIMGL 162
BLAST of CmoCh16G003090 vs. ExPASy TrEMBL
Match:
A0A0A0KYF6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G179140 PE=4 SV=1)
HSP 1 Score: 231.1 bits (588), Expect = 3.3e-57
Identity = 125/162 (77.16%), Postives = 134/162 (82.72%), Query Frame = 0
Query: 1 MMFAINLRFPSVHGQIHNFQFQSWPSPALSRSRLPCQITYCRKKFSDADLASDLAMEVAK 60
M+ AINLR P IH+F+FQ PSP LSR+R+P QITYCRKK SDADLASDLA EVAK
Sbjct: 1 MISAINLRLP-----IHSFRFQPSPSPTLSRNRMPRQITYCRKKLSDADLASDLATEVAK 60
Query: 61 INTNLIQGEEAMTKSREILFTELCGFLGLKSEETKRCWKKMDEEAKLTLIKEFVSEWGFN 120
INTNLIQ EEAM KSRE LFTELC FLGLKSEETKR W KM+EEAKL L+KEFVSEWGFN
Sbjct: 61 INTNLIQREEAMKKSREFLFTELCEFLGLKSEETKRKWMKMEEEAKLRLVKEFVSEWGFN 120
Query: 121 FQPLSPRSAKEMVEEYVINGENSPAISSASSLISSLKKSIGL 163
FQPLS R KEMVEEYV NGEN ISSASS ISSLKK++GL
Sbjct: 121 FQPLSGRCVKEMVEEYV-NGENLYGISSASSFISSLKKTMGL 156
BLAST of CmoCh16G003090 vs. ExPASy TrEMBL
Match:
A0A1S3BZE3 (LOW QUALITY PROTEIN: uncharacterized protein LOC103494847 OS=Cucumis melo OX=3656 GN=LOC103494847 PE=4 SV=1)
HSP 1 Score: 216.5 bits (550), Expect = 8.4e-53
Identity = 120/162 (74.07%), Postives = 132/162 (81.48%), Query Frame = 0
Query: 1 MMFAINLRFPSVHGQIHNFQFQSWPSPALSRSRLPCQITYCRKKFSDADLASDLAMEVAK 60
M+ AINLR P G+IHNF+FQ PSP L R+R+P QITYCRKK SDADLA DLA EVAK
Sbjct: 1 MISAINLRPP--RGEIHNFRFQPSPSPTLFRNRMPRQITYCRKKLSDADLAFDLATEVAK 60
Query: 61 INTNLIQGEEAMTKSREILFTELCGFLGLKSEETKRCWKKMDEEAKLTLIKEFVSEWGFN 120
INTNLIQ EEAM KSR ++ + FLGLKSEETKR WKKM+EEAKL L+KEFVSEWGFN
Sbjct: 61 INTNLIQREEAMKKSRAFVYRAV-EFLGLKSEETKRKWKKMEEEAKLRLVKEFVSEWGFN 120
Query: 121 FQPLSPRSAKEMVEEYVINGENSPAISSASSLISSLKKSIGL 163
FQPLS R KEMVEEYV NGEN ISSASSLISSLKK++GL
Sbjct: 121 FQPLSGRCVKEMVEEYV-NGENLYGISSASSLISSLKKTMGL 158
BLAST of CmoCh16G003090 vs. NCBI nr
Match:
XP_022922671.1 (uncharacterized protein LOC111430603 [Cucurbita moschata])
HSP 1 Score: 324.3 bits (830), Expect = 5.9e-85
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0
Query: 1 MMFAINLRFPSVHGQIHNFQFQSWPSPALSRSRLPCQITYCRKKFSDADLASDLAMEVAK 60
MMFAINLRFPSVHGQIHNFQFQSWPSPALSRSRLPCQITYCRKKFSDADLASDLAMEVAK
Sbjct: 1 MMFAINLRFPSVHGQIHNFQFQSWPSPALSRSRLPCQITYCRKKFSDADLASDLAMEVAK 60
Query: 61 INTNLIQGEEAMTKSREILFTELCGFLGLKSEETKRCWKKMDEEAKLTLIKEFVSEWGFN 120
INTNLIQGEEAMTKSREILFTELCGFLGLKSEETKRCWKKMDEEAKLTLIKEFVSEWGFN
Sbjct: 61 INTNLIQGEEAMTKSREILFTELCGFLGLKSEETKRCWKKMDEEAKLTLIKEFVSEWGFN 120
Query: 121 FQPLSPRSAKEMVEEYVINGENSPAISSASSLISSLKKSIGL 163
FQPLSPRSAKEMVEEYVINGENSPAISSASSLISSLKKSIGL
Sbjct: 121 FQPLSPRSAKEMVEEYVINGENSPAISSASSLISSLKKSIGL 162
BLAST of CmoCh16G003090 vs. NCBI nr
Match:
KAG7014917.1 (hypothetical protein SDJN02_22548, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 322.4 bits (825), Expect = 2.2e-84
Identity = 161/162 (99.38%), Postives = 161/162 (99.38%), Query Frame = 0
Query: 1 MMFAINLRFPSVHGQIHNFQFQSWPSPALSRSRLPCQITYCRKKFSDADLASDLAMEVAK 60
MMFAINLRFP VHGQIHNFQFQSWPSPALSRSRLPCQITYCRKKFSDADLASDLAMEVAK
Sbjct: 1 MMFAINLRFPRVHGQIHNFQFQSWPSPALSRSRLPCQITYCRKKFSDADLASDLAMEVAK 60
Query: 61 INTNLIQGEEAMTKSREILFTELCGFLGLKSEETKRCWKKMDEEAKLTLIKEFVSEWGFN 120
INTNLIQGEEAMTKSREILFTELCGFLGLKSEETKRCWKKMDEEAKLTLIKEFVSEWGFN
Sbjct: 61 INTNLIQGEEAMTKSREILFTELCGFLGLKSEETKRCWKKMDEEAKLTLIKEFVSEWGFN 120
Query: 121 FQPLSPRSAKEMVEEYVINGENSPAISSASSLISSLKKSIGL 163
FQPLSPRSAKEMVEEYVINGENSPAISSASSLISSLKKSIGL
Sbjct: 121 FQPLSPRSAKEMVEEYVINGENSPAISSASSLISSLKKSIGL 162
BLAST of CmoCh16G003090 vs. NCBI nr
Match:
KAG6576890.1 (hypothetical protein SDJN03_24464, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 320.9 bits (821), Expect = 6.5e-84
Identity = 160/161 (99.38%), Postives = 160/161 (99.38%), Query Frame = 0
Query: 2 MFAINLRFPSVHGQIHNFQFQSWPSPALSRSRLPCQITYCRKKFSDADLASDLAMEVAKI 61
MFAINLRFP VHGQIHNFQFQSWPSPALSRSRLPCQITYCRKKFSDADLASDLAMEVAKI
Sbjct: 1 MFAINLRFPRVHGQIHNFQFQSWPSPALSRSRLPCQITYCRKKFSDADLASDLAMEVAKI 60
Query: 62 NTNLIQGEEAMTKSREILFTELCGFLGLKSEETKRCWKKMDEEAKLTLIKEFVSEWGFNF 121
NTNLIQGEEAMTKSREILFTELCGFLGLKSEETKRCWKKMDEEAKLTLIKEFVSEWGFNF
Sbjct: 61 NTNLIQGEEAMTKSREILFTELCGFLGLKSEETKRCWKKMDEEAKLTLIKEFVSEWGFNF 120
Query: 122 QPLSPRSAKEMVEEYVINGENSPAISSASSLISSLKKSIGL 163
QPLSPRSAKEMVEEYVINGENSPAISSASSLISSLKKSIGL
Sbjct: 121 QPLSPRSAKEMVEEYVINGENSPAISSASSLISSLKKSIGL 161
BLAST of CmoCh16G003090 vs. NCBI nr
Match:
XP_023551996.1 (uncharacterized protein LOC111809798 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 319.7 bits (818), Expect = 1.5e-83
Identity = 158/162 (97.53%), Postives = 161/162 (99.38%), Query Frame = 0
Query: 1 MMFAINLRFPSVHGQIHNFQFQSWPSPALSRSRLPCQITYCRKKFSDADLASDLAMEVAK 60
MMFAINLRFP VHGQIHNFQFQSWPSPALSRSRLPCQITYCRKKFSDADLASDLAMEVAK
Sbjct: 1 MMFAINLRFPRVHGQIHNFQFQSWPSPALSRSRLPCQITYCRKKFSDADLASDLAMEVAK 60
Query: 61 INTNLIQGEEAMTKSREILFTELCGFLGLKSEETKRCWKKMDEEAKLTLIKEFVSEWGFN 120
INTNLIQGEEAMTKSREILFTELCGFLGLKSEETKRCWKKMDEEAKLTL+KEFVSEWGFN
Sbjct: 61 INTNLIQGEEAMTKSREILFTELCGFLGLKSEETKRCWKKMDEEAKLTLVKEFVSEWGFN 120
Query: 121 FQPLSPRSAKEMVEEYVINGENSPAISSASSLISSLKKSIGL 163
FQPLSPRSAKEMVEEYVINGENSPAISSASSLISSLKK++GL
Sbjct: 121 FQPLSPRSAKEMVEEYVINGENSPAISSASSLISSLKKTMGL 162
BLAST of CmoCh16G003090 vs. NCBI nr
Match:
XP_022984827.1 (uncharacterized protein LOC111482994 [Cucurbita maxima])
HSP 1 Score: 311.6 bits (797), Expect = 3.9e-81
Identity = 155/162 (95.68%), Postives = 158/162 (97.53%), Query Frame = 0
Query: 1 MMFAINLRFPSVHGQIHNFQFQSWPSPALSRSRLPCQITYCRKKFSDADLASDLAMEVAK 60
M+FAINLRFP VHGQIHNFQFQSWPS ALSRSRLPCQITYCRKKFSDADLASDLAMEVAK
Sbjct: 1 MIFAINLRFPRVHGQIHNFQFQSWPSSALSRSRLPCQITYCRKKFSDADLASDLAMEVAK 60
Query: 61 INTNLIQGEEAMTKSREILFTELCGFLGLKSEETKRCWKKMDEEAKLTLIKEFVSEWGFN 120
INTNLIQGEEAMTKSREILFT+LCGFL LKSEETKRCWKKMDEEAKLTL+KEFVSEWGFN
Sbjct: 61 INTNLIQGEEAMTKSREILFTDLCGFLELKSEETKRCWKKMDEEAKLTLVKEFVSEWGFN 120
Query: 121 FQPLSPRSAKEMVEEYVINGENSPAISSASSLISSLKKSIGL 163
FQPLSPRS KEMVEEYVINGENSPAISSASSLISSLKKSIGL
Sbjct: 121 FQPLSPRSVKEMVEEYVINGENSPAISSASSLISSLKKSIGL 162
BLAST of CmoCh16G003090 vs. TAIR 10
Match:
AT5G64480.1 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )
HSP 1 Score: 102.8 bits (255), Expect = 2.6e-22
Identity = 58/126 (46.03%), Postives = 77/126 (61.11%), Query Frame = 0
Query: 42 RKKFSDADLASDLAMEVAKINTNLIQGEEAMTKSREILFTELCGFLGLKSEETKRCWKKM 101
+K +D++LA+DLA E+ K NT Q EAM KS EIL+ E C + LK +E K W K+
Sbjct: 57 KKIMTDSELATDLAREIGKANTVAEQRREAMKKSGEILWAEFCRHMDLKEDEMKIKWNKI 116
Query: 102 DEEAKLTLIKEFVSEWGFNFQPLSPRSAKEMVE------EYVINGENSPAISSASSLISS 161
EE KL L++EFV EW +FQPLS S KEMV+ + I +S ++SS S L
Sbjct: 117 GEEEKLVLVREFVDEWAGDFQPLSITSVKEMVDQECLDSDKTIESSSSSSMSSFSGLFPG 176
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1E4R4 | 2.9e-85 | 100.00 | uncharacterized protein LOC111430603 OS=Cucurbita moschata OX=3662 GN=LOC1114306... | [more] |
| A0A6J1J388 | 1.9e-81 | 95.68 | uncharacterized protein LOC111482994 OS=Cucurbita maxima OX=3661 GN=LOC111482994... | [more] |
| A0A6J1D577 | 3.2e-60 | 76.69 | uncharacterized protein LOC111017712 OS=Momordica charantia OX=3673 GN=LOC111017... | [more] |
| A0A0A0KYF6 | 3.3e-57 | 77.16 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G179140 PE=4 SV=1 | [more] |
| A0A1S3BZE3 | 8.4e-53 | 74.07 | LOW QUALITY PROTEIN: uncharacterized protein LOC103494847 OS=Cucumis melo OX=365... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| XP_022922671.1 | 5.9e-85 | 100.00 | uncharacterized protein LOC111430603 [Cucurbita moschata] | [more] |
| KAG7014917.1 | 2.2e-84 | 99.38 | hypothetical protein SDJN02_22548, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
| KAG6576890.1 | 6.5e-84 | 99.38 | hypothetical protein SDJN03_24464, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| XP_023551996.1 | 1.5e-83 | 97.53 | uncharacterized protein LOC111809798 [Cucurbita pepo subsp. pepo] | [more] |
| XP_022984827.1 | 3.9e-81 | 95.68 | uncharacterized protein LOC111482994 [Cucurbita maxima] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT5G64480.1 | 2.6e-22 | 46.03 | unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae ... | [more] |
