CmoCh16G002910 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh16G002910
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionCarbonic anhydrase
LocationCmo_Chr16: 1330555 .. 1331645 (-)
RNA-Seq ExpressionCmoCh16G002910
SyntenyCmoCh16G002910
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGAAGAAGTTGCAGGTGGAGGAGATAGTAGGGAATGAAGGCAAGTTTGGAAGCGCCATTGTTGGAAGCGGAGGTAGCCCGACCCCAGTCGGGATGTTCACCGGGAAGCTCGGAAGCGGAGGGAGATTAACCCTAGGCAATGTGGGTTGTGGCATATTCGGAAGAGTAGGGTTTGGCAAGGCAGGCAACGACGGCAACCCTATTGGAACCACTGGCAAGTTCGGTAGCGTGGGCGAACCAATTTATAAAAGATGGTGGGCAGCTCGACCGACGTCGATGCTTGAAAGCGTCAAAGCAACAATGAAGGTAATGGTCAAGAACTTTGGAAGAGGCCTATTTTTTTTGTACTAATTTTTAATTATACTCCTCAACATTTACAAATATCATTTTTAAAACTTTAAATTAACGCAACTTTTTTGTTAAATGAAGATGAAAAAACATGACAATGACCTATAAAATAATGGTACACGTTGACGTAATAAAGGTGACATGTTTTAATTATATCATTAAACTTTAAGATATGTTTCAATTATATCCTTAATGTTTCTAATTTTCATTTTAACCCTAAGTTATCGTCACGTTGGAATGAACATTTTTCGTTGCTGATCGTATCTATTATTTTTCGTAGTGTGAGAGAGAAATAGAAAAAGAAAGAGATCCCGTTGAATTGAAATTTAAAAGCTTGAACAATATAATAACGAGAATGAACTTCAATCTTACAAACCGACACGAATATTGAAAACACACAACAATTGTGATAATAATAAAACCTTAAACTCCACACACAAACTACCCAACAAGAATCATGGCTGCAAATAACCAACCAAGCTTAGGGGGAAGAAGAAGCTGCAGGCGGAGGAGACAAAAATGGGATGGAAGGAAATGAAGCTGGAATGGTAGGGATCGACGCCATTGTCGGGAGCGGGGGGAGTGCAGCCCCGCTCGGGATGTTAACCGGGAAGCTCGGAAAAGGCAATGTGGGTTGTGGTAGATTTGGAAGAGCAGGCAATGGAGGTATCCCCGTTGGAACGACGGGCAAGTTCGGCACCAAGGGCGGAGTAGTTTGCAAGAGATGGCGGGCAGCTTGA

mRNA sequence

ATGGGGAAGAAGTTGCAGGTGGAGGAGATAGTAGGGAATGAAGGCAAGTTTGGAAGCGCCATTGTTGGAAGCGGAGGTAGCCCGACCCCAGTCGGGATGTTCACCGGGAAGCTCGGAAGCGGAGGGAGATTAACCCTAGGCAATGTGGGTTGTGGCATATTCGGAAGAGTAGGGTTTGGCAAGGCAGGCAACGACGGCAACCCTATTGGAACCACTGGCAAGTTCGGTAGCGTGGGCGAACCAATTTATAAAAGATGGTGGGCAGCTCGACCGACGTCGATGCTTGAAAGCGTCAAAGCAACAATGAAGGGGGAAGAAGAAGCTGCAGGCGGAGGAGACAAAAATGGGATGGAAGGAAATGAAGCTGGAATGGTAGGGATCGACGCCATTGTCGGGAGCGGGGGGAGTGCAGCCCCGCTCGGGATGTTAACCGGGAAGCTCGGAAAAGGCAATGTGGGTTGTGGTAGATTTGGAAGAGCAGGCAATGGAGGTATCCCCGTTGGAACGACGGGCAAGTTCGGCACCAAGGGCGGAGTAGTTTGCAAGAGATGGCGGGCAGCTTGA

Coding sequence (CDS)

ATGGGGAAGAAGTTGCAGGTGGAGGAGATAGTAGGGAATGAAGGCAAGTTTGGAAGCGCCATTGTTGGAAGCGGAGGTAGCCCGACCCCAGTCGGGATGTTCACCGGGAAGCTCGGAAGCGGAGGGAGATTAACCCTAGGCAATGTGGGTTGTGGCATATTCGGAAGAGTAGGGTTTGGCAAGGCAGGCAACGACGGCAACCCTATTGGAACCACTGGCAAGTTCGGTAGCGTGGGCGAACCAATTTATAAAAGATGGTGGGCAGCTCGACCGACGTCGATGCTTGAAAGCGTCAAAGCAACAATGAAGGGGGAAGAAGAAGCTGCAGGCGGAGGAGACAAAAATGGGATGGAAGGAAATGAAGCTGGAATGGTAGGGATCGACGCCATTGTCGGGAGCGGGGGGAGTGCAGCCCCGCTCGGGATGTTAACCGGGAAGCTCGGAAAAGGCAATGTGGGTTGTGGTAGATTTGGAAGAGCAGGCAATGGAGGTATCCCCGTTGGAACGACGGGCAAGTTCGGCACCAAGGGCGGAGTAGTTTGCAAGAGATGGCGGGCAGCTTGA

Protein sequence

MGKKLQVEEIVGNEGKFGSAIVGSGGSPTPVGMFTGKLGSGGRLTLGNVGCGIFGRVGFGKAGNDGNPIGTTGKFGSVGEPIYKRWWAARPTSMLESVKATMKGEEEAAGGGDKNGMEGNEAGMVGIDAIVGSGGSAAPLGMLTGKLGKGNVGCGRFGRAGNGGIPVGTTGKFGTKGGVVCKRWRAA
Homology
BLAST of CmoCh16G002910 vs. ExPASy TrEMBL
Match: A0A0A0L0M4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G374620 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 1.5e-16
Identity = 51/94 (54.26%), Postives = 63/94 (67.02%), Query Frame = 0

Query: 10  IVGNEGKFGSAIVGSGGSPTPVGMFTGKLGSGGRLTLGNVGCGIFGRVGFGKAGNDGNPI 69
           +VG +GKFGS IVGSGG+ +P+       GSGG+L  GNVGCG FGRVGFGK GN G  +
Sbjct: 8   MVGIDGKFGSVIVGSGGNASPI-------GSGGKLIFGNVGCGNFGRVGFGKPGNGGIRV 67

Query: 70  GTTGKFGSVGEPIYKRWWAARPTSMLESVKATMK 104
           G  G+FG+ G  + +RW AA P  MLE  K  +K
Sbjct: 68  GIAGRFGTKGGVVCERWRAAWPKLMLERAKVAVK 94

BLAST of CmoCh16G002910 vs. ExPASy TrEMBL
Match: A0A0A0KYM4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G375140 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 9.4e-16
Identity = 50/94 (53.19%), Postives = 62/94 (65.96%), Query Frame = 0

Query: 10  IVGNEGKFGSAIVGSGGSPTPVGMFTGKLGSGGRLTLGNVGCGIFGRVGFGKAGNDGNPI 69
           +VG +GKFGS IVGSGG+ +P+        SGG+LT GNVGCG FGRVGFGK GN G  +
Sbjct: 8   MVGIDGKFGSVIVGSGGNGSPI-------ESGGKLTFGNVGCGKFGRVGFGKPGNGGIRV 67

Query: 70  GTTGKFGSVGEPIYKRWWAARPTSMLESVKATMK 104
           G  G+FG+ G  + +RW  A P  MLE  K  +K
Sbjct: 68  GIAGRFGTKGGVVCQRWRVAWPKLMLERAKVAVK 94

BLAST of CmoCh16G002910 vs. ExPASy TrEMBL
Match: A0A0A0L399 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G374640 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 1.6e-15
Identity = 50/94 (53.19%), Postives = 61/94 (64.89%), Query Frame = 0

Query: 10  IVGNEGKFGSAIVGSGGSPTPVGMFTGKLGSGGRLTLGNVGCGIFGRVGFGKAGNDGNPI 69
           +VG  G FGS IVGSGG+ +P+       GSGG+L  GNVGCG FGRVGFGK GN G  +
Sbjct: 8   MVGIGGNFGSVIVGSGGNASPI-------GSGGKLIFGNVGCGNFGRVGFGKPGNGGIRV 67

Query: 70  GTTGKFGSVGEPIYKRWWAARPTSMLESVKATMK 104
           G  G+FG+ G  + +RW AA P  MLE  K  +K
Sbjct: 68  GIAGRFGTKGGVVCERWRAAWPKLMLERAKVAVK 94

BLAST of CmoCh16G002910 vs. ExPASy TrEMBL
Match: A0A6J1J1P5 (uncharacterized protein LOC111482613 OS=Cucurbita maxima OX=3661 GN=LOC111482613 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 6.6e-09
Identity = 44/98 (44.90%), Postives = 56/98 (57.14%), Query Frame = 0

Query: 12  GNEGKFGSAIVGSGGSPTPVGMFTGKLGSGGRLTLGN-------VGCGIFGRVGFGKAGN 71
           G +GK GS  VG+GG   PVGMF G+LGSGG ++LG+       VG G  G  G G + +
Sbjct: 36  GRDGKVGSEDVGNGGKAAPVGMFIGELGSGGSVSLGSDGVLGPVVGFGNMGNAGRGGSAD 95

Query: 72  DGNPIGTTGKFGSVGEPIYKRWWAARPTSMLESVKATM 103
                G  G+ GS G  + +R   ARP S LE+ KATM
Sbjct: 96  GLGSDGIGGRVGSEGGAVCRRCRVARPRSTLENAKATM 133

BLAST of CmoCh16G002910 vs. ExPASy TrEMBL
Match: A0A5D3E0R8 (Carbonic anhydrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G00040 PE=3 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 1.9e-08
Identity = 45/100 (45.00%), Postives = 57/100 (57.00%), Query Frame = 0

Query: 10  IVGNEGKFGSAIVGSGGSPTPVGMFTGKLGSGGRLTLGNVGC------GIFGRVGFGKAG 69
           I G +GKFGS +VG GG+ T VGMF G+LGSGG ++LG  G       GI G VG G  G
Sbjct: 297 IDGRDGKFGSEVVGRGGNATLVGMFMGRLGSGGSVSLGREGSGKFGMDGILGPVGTGGRG 356

Query: 70  NDGNPIGTTGKFGSVGEPIYKRWWAARPTSMLESVKATMK 104
              + +G+ G  G  G  + +R    R  S LE+ K TMK
Sbjct: 357 GTADGLGSDGIGGKFG-IVCRRCREVRAASTLENAKVTMK 395

BLAST of CmoCh16G002910 vs. NCBI nr
Match: KAG7014899.1 (hypothetical protein SDJN02_22530, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 362.5 bits (929), Expect = 2.3e-96
Identity = 183/185 (98.92%), Postives = 184/185 (99.46%), Query Frame = 0

Query: 3   KKLQVEEIVGNEGKFGSAIVGSGGSPTPVGMFTGKLGSGGRLTLGNVGCGIFGRVGFGKA 62
           KKLQVEEIVGNEGKFGSAIVGSGGSPTPVGMFTGKLGSGGRLTLGNVGCGIFGRVGFGKA
Sbjct: 4   KKLQVEEIVGNEGKFGSAIVGSGGSPTPVGMFTGKLGSGGRLTLGNVGCGIFGRVGFGKA 63

Query: 63  GNDGNPIGTTGKFGSVGEPIYKRWWAARPTSMLESVKATMKGEEEAAGGGDKNGMEGNEA 122
           GNDGNPIGTTGKFGSVGEP+YKRWWAARPTSMLESVKATMKGEEEAAGGGDKNGMEGNEA
Sbjct: 64  GNDGNPIGTTGKFGSVGEPVYKRWWAARPTSMLESVKATMKGEEEAAGGGDKNGMEGNEA 123

Query: 123 GMVGIDAIVGSGGSAAPLGMLTGKLGKGNVGCGRFGRAGNGGIPVGTTGKFGTKGGVVCK 182
           GMVGIDAIVGSGGSAAPLGMLTGKLGKGNVGCGRFGRAGNGGIPVGTTGKFGTK GVVCK
Sbjct: 124 GMVGIDAIVGSGGSAAPLGMLTGKLGKGNVGCGRFGRAGNGGIPVGTTGKFGTKDGVVCK 183

Query: 183 RWRAA 188
           RWRAA
Sbjct: 184 RWRAA 188

BLAST of CmoCh16G002910 vs. NCBI nr
Match: KAG6576875.1 (hypothetical protein SDJN03_24449, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 356.3 bits (913), Expect = 1.6e-94
Identity = 180/185 (97.30%), Postives = 182/185 (98.38%), Query Frame = 0

Query: 3   KKLQVEEIVGNEGKFGSAIVGSGGSPTPVGMFTGKLGSGGRLTLGNVGCGIFGRVGFGKA 62
           KKLQVEEIVGNEGKFGSAIVGSGGSPTPVGMFTGKLGSGGRLTLGNVGCGIF RVGFGK 
Sbjct: 4   KKLQVEEIVGNEGKFGSAIVGSGGSPTPVGMFTGKLGSGGRLTLGNVGCGIFERVGFGKV 63

Query: 63  GNDGNPIGTTGKFGSVGEPIYKRWWAARPTSMLESVKATMKGEEEAAGGGDKNGMEGNEA 122
           GNDGNPIGTTGKFGSVGEP+YKRWWAA+PTSMLESVKATMKGEEEAAGGGDKNGMEGNEA
Sbjct: 64  GNDGNPIGTTGKFGSVGEPVYKRWWAAQPTSMLESVKATMKGEEEAAGGGDKNGMEGNEA 123

Query: 123 GMVGIDAIVGSGGSAAPLGMLTGKLGKGNVGCGRFGRAGNGGIPVGTTGKFGTKGGVVCK 182
           GMVGIDAIVGSGGSAAPLGMLTGKLGKGNVGCGRFGRAGNGGIPVGTTGKFGTK GVVCK
Sbjct: 124 GMVGIDAIVGSGGSAAPLGMLTGKLGKGNVGCGRFGRAGNGGIPVGTTGKFGTKDGVVCK 183

Query: 183 RWRAA 188
           RWRAA
Sbjct: 184 RWRAA 188

BLAST of CmoCh16G002910 vs. NCBI nr
Match: KAG7014900.1 (hypothetical protein SDJN02_22531, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 95.5 bits (236), Expect = 5.1e-16
Identity = 77/187 (41.18%), Postives = 98/187 (52.41%), Query Frame = 0

Query: 2   GKKLQVEEIVGNEGKFGSAIVGSGGSPTPVGMFTGKLGSGGRLTLGN-------VGCGIF 61
           G    V  I G +GK GS   G+GG   P GMF G+LGSGG + L +       VG G  
Sbjct: 26  GSDGSVVGIDGRDGKVGSEDDGNGGKAAPAGMFIGELGSGGSVGLESDGILDPVVGFGNM 85

Query: 62  GRVGFGKAGNDGNPIGTTGKFGSVGEPIYKRWWAARPTSMLESVKATMKGEEEAAGGGDK 121
           G  G G + +     G  G+ GS G  + +R   ARP  +        +GEE AAGGG +
Sbjct: 86  GDAGRGGSAHGLGSNGIGGRVGSEGGAVCRRCRVARPLGL-------HQGEEVAAGGGVR 145

Query: 122 NGMEGNEAGMVGIDAIVGSGGSAAPLGMLTGKLGKGNV----GCGRFGRAGNGGIPVGTT 178
            G++G    ++G D  VGSGG+  P+GML GKLG+G +    GCGR G     GIP GT 
Sbjct: 146 KGIDGK---VIGKDGRVGSGGNVTPVGMLPGKLGRGGILGREGCGRLGIE---GIP-GTV 198

BLAST of CmoCh16G002910 vs. NCBI nr
Match: XP_022984242.1 (uncharacterized protein LOC111482613 [Cucurbita maxima])

HSP 1 Score: 70.9 bits (172), Expect = 1.4e-08
Identity = 44/98 (44.90%), Postives = 56/98 (57.14%), Query Frame = 0

Query: 12  GNEGKFGSAIVGSGGSPTPVGMFTGKLGSGGRLTLGN-------VGCGIFGRVGFGKAGN 71
           G +GK GS  VG+GG   PVGMF G+LGSGG ++LG+       VG G  G  G G + +
Sbjct: 36  GRDGKVGSEDVGNGGKAAPVGMFIGELGSGGSVSLGSDGVLGPVVGFGNMGNAGRGGSAD 95

Query: 72  DGNPIGTTGKFGSVGEPIYKRWWAARPTSMLESVKATM 103
                G  G+ GS G  + +R   ARP S LE+ KATM
Sbjct: 96  GLGSDGIGGRVGSEGGAVCRRCRVARPRSTLENAKATM 133

BLAST of CmoCh16G002910 vs. NCBI nr
Match: TYK29414.1 (beta carbonic anhydrase 5 [Cucumis melo var. makuwa])

HSP 1 Score: 69.3 bits (168), Expect = 3.9e-08
Identity = 45/100 (45.00%), Postives = 57/100 (57.00%), Query Frame = 0

Query: 10  IVGNEGKFGSAIVGSGGSPTPVGMFTGKLGSGGRLTLGNVGC------GIFGRVGFGKAG 69
           I G +GKFGS +VG GG+ T VGMF G+LGSGG ++LG  G       GI G VG G  G
Sbjct: 297 IDGRDGKFGSEVVGRGGNATLVGMFMGRLGSGGSVSLGREGSGKFGMDGILGPVGTGGRG 356

Query: 70  NDGNPIGTTGKFGSVGEPIYKRWWAARPTSMLESVKATMK 104
              + +G+ G  G  G  + +R    R  S LE+ K TMK
Sbjct: 357 GTADGLGSDGIGGKFG-IVCRRCREVRAASTLENAKVTMK 395

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0L0M41.5e-1654.26Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G374620 PE=4 SV=1[more]
A0A0A0KYM49.4e-1653.19Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G375140 PE=4 SV=1[more]
A0A0A0L3991.6e-1553.19Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G374640 PE=4 SV=1[more]
A0A6J1J1P56.6e-0944.90uncharacterized protein LOC111482613 OS=Cucurbita maxima OX=3661 GN=LOC111482613... [more]
A0A5D3E0R81.9e-0845.00Carbonic anhydrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G0... [more]
Match NameE-valueIdentityDescription
KAG7014899.12.3e-9698.92hypothetical protein SDJN02_22530, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6576875.11.6e-9497.30hypothetical protein SDJN03_24449, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7014900.15.1e-1641.18hypothetical protein SDJN02_22531, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_022984242.11.4e-0844.90uncharacterized protein LOC111482613 [Cucurbita maxima][more]
TYK29414.13.9e-0845.00beta carbonic anhydrase 5 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh16G002910.1CmoCh16G002910.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003824 catalytic activity