CmoCh16G002650 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh16G002650
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
Descriptionpolyadenylate-binding protein 2-like
LocationCmo_Chr16: 1174636 .. 1179225 (+)
RNA-Seq ExpressionCmoCh16G002650
SyntenyCmoCh16G002650
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AATTAAAAAGGTTTAAAGACGAAATTGGCGAAAGGTTAAAGTTGTAGGGTTAACCGTAATTTTACCATTAAAAGAGGGGAAAGGTGCGTAAGCTATAGGAGCCGGGTTGAACACAAATTTACTGTTAACTCCCTTTGAGGGAAAGGGGAGAGAGACTGAGAGAGAGACGGAGAGACGAAGGGGCGGAGGGGCGAAGGAGAAGCCATGGAGCACGAAGACGTCGACATGATTGGCTTGGAGACCAACGATGCTGCGGTTCGTCTTCCATTTTAATCTTTTTTTTTTGTTCTCTTTCAATTCGATTCTTATATACCATCCTTTTGTTTTTGGTGTGTAAAAACCCTAATTGCTCTTTTTTCTCCTGGTTTTCAGGAGTTAGATGACATGAAGAAGCGGTTGAAAGAGATGGAAGATGAAGCTGCTGCTCTACGTGAGATGCAAGCCAAGGTCGAGAAGGAAATGAGTTCTGTACAAGGTTGGTTTATGCTCTTCTTCGCTTTTGTGAATTTCTTTTGTGTTTTTGTACAATGTCATTGAGATATGGAGGCTCTTGGATTCTATTCGTCGTGTTAGTATTTACGATGTCTATCTTGGATCTTATTTGATGAAATACTGAATAAGTAAGTCGAGTTTTGGTATTTGTTTGATTCTGAAGGTCGTCTTTTTGTTGGATGCAAGTTGAAAATGTTTAATGTTTGAAGAAGGCGCATTTGGATCTCATGCAAAAAACTGACTCTTGCATTTGAATTCCATATTGTTGTAGCTATTCATTAACTGAGTAACTGATTTTTGAACTATCTCCGACTTGGAGATGATTCATTCTCATCTTAATCACAAAGTTGTAGTTTCTGATTAGGAGAAGTTTGCCTTGGGATGAGAACCTAATTATGGAGACATATTATTTGCTGATCATCCCGTACATGTTTTTAATCTAAATATATCTCTCATGCGAAAGAAGTTCAAGCAGTCTGTTACCGTTAAATGTTTAGCCACTTTTTGTACTACCAGATCCAGCAAGTGCTGCTGCAAGTCAAGCAAATAGGGAGGAAGTGGATGCACGGTCAGTGTTTGTTGGCAATGTATGATCTCTTTACCCTTGACCAATATATATATTTTCTTTTGCATATTTCTTCACTCGTACCCCACGATTGGCTGAACTTTAATTTAATGGGTGCAAGGATTCTCTCTGTTAATGTTAAATTCTTGAACAATATGTATTTACAGTTTGCACTACTTTTTATTTTTACTAGATTTGTTACTTCTATTCAGGTCATTCGTTATGAAGGGGAGCTAAGACTTGCTCTTCTTGTAGCTTTCTCTAAGATTATTAATCTTTTGTCTTTCTTTTGTTCCATGCATTTGATATGATGAATGGAGCAATCTTATTGAAGTATTTGGTGACCTTTTTATATTTTGAATGGATTGGATTTATCAATAATTGAAGGTAAACTGGCAAGAGAAGCCACTGACTGGAGCTGTCTTCTTTATTGAACAATAGAAAGAGCTTTTTGAGCATGACTTTCTTTGAGAGTTCATTTACTTAATTATTGACATGGATTAAACTGACTAACTTTCATTCCTTGGTTTGTTCATTCCTCGTGTGGTCATAAAGATTTACTAAATTTCAGGTAGACATGGGTTGTTTCTTGTGGTACATATCATTCATGTCTTAGGAAGAGGTTGGATCATGCTTTACATTTTGAGGATGTTAAAGTGGTTGGTTGCTAGCAGTACTATTTTAGAGATGTTTGGAGGGATCATTGTATTGTTATCTATCGTTCTGCCTTTTAAGAACATTGAAATCTGTAAATAACTATTATGAATATTTTCCAAATAGATTGTTGCCATAAATTCAGTTCAATGTGGATAGTTACTTTTTAAATTTATATATGACCCATTTCTGTACTGTGCTTGAAATTTTAGTATATGTCGGTGTTTCTAGCCTGATTTGACTCCCATGTTTGACTGCAATTACAGGTTAGGCTTACTTCGTCAGGTTTTCTGATTACCTATTGCTGAAGTCGGATATTCTCTGATATGTTATAAATAGCTATCTAGTATATAAAAAAAGTGTCTTGTTCCAAAAGAAAGAGCGGATAAAAACTGTGATAAAATGTATAAGGATAAGGTGTAAAATTTTCAAGAGGGTAATAGTTTTGGTTGAATCTTTTGAAAAGAGTGATGGAAGAAAAAAGTTGAGATGAGTTAACAAGAAAAGAAAATATACCTAAATATCATGTAGTCGTGCCTTGTTAGCTTAGTGGGTGGGCTCAGAGTCAGTCAATCTAACATGTCTCAAGTTTGAGGCCATGTGGTTAATGGGAAAGAGGAGTTGGTTAAAAAAAAAAAAAAAAAAAGTGGGAGAGAGAATAAACTCACCAGCCCAGAAAAGGGTATGTATGACTATGGATGAAGTCAGCAGAAGTTTTACTGGTTTGCTTGATTGAACTGGAAGGCTTGACAAGTTTTGAAGGGAAGTAATGTGCATTCACAACTAAGGAGGACTGGCTGTGGCGCTGAGGTATGTTATTGTCTTGTGTTGAAGCCAGCATTTGTGACCACTGTTCGAGGATTGTTTAAGTGATTTACAATCTATGGTGAGGGACCTCCAAATATCTCTGATTTTCCTGTCTCCTCCCTTAATCCATCAAGGAAAGGAAAAAGGCATAATTAGGGAAGCTTTTATGTTTCTATTTCTACTTGTGGGAAATATTCATTTTTACCTTCGTAAATATCCCACTCAGTCAATTTTAACTTTAAAGTTTTAGTTTCATCAAGTTGAACTCTATGCTTGTATAGGGTATAAAATTAAGGCCTTTCCTTGATTTGAAGTTCAAAAAATTTTGTATAACTAACTGAAATTGTTCAAAATCTAACAAACCCAAAATACTGCTAGAAAAACTCCCAATGTCACCCAATGTAAAGACATCCCTACTCAACAATTATTAAGTATACATAGAAATAGTGTTCTCCAATCACAAGCACCCACACTTAACCTTCAATCTCAAAATGGGGAAAAAAAACCAACATAGGTTTCTAATTTGAACTTTTATTCAAGTTGAATTGGACAAAATTCAAATTTAAAAATTAAATTGGACTCATTCAGCTAAGTAGTACCCATCAGGATTTGTTTTTCTGTCGTTTGGTAGGAGCAGTCAAATGTCTCTCCTTTCCATAGATGAATACGAGTTCCTTGGATGGTTTCTGTTTACTGGGCTATTACATTATTACATTGTCATTCTTGTATGAATATTCTCTTATAATCATGGCCATTGGTCAAAAAAGCTGTTAGTCGTCTAGGATTTTTCAAGAGAACAAATGTGGGGAAATTAGAGTTGCATGGTGATTTCTTGTCTTCTCATGAATGGATATCCATTGGAATTAGAAAGAGACCTATTATTATGAACGATTGGGACGTGACTTTTATTAATTAATTTAATTTTTATTCTCAGTTCGTTACAGGGTGATGTACTATGACTATCACACAGTAATTATGAAAATGTGTGACTCATTTTATTGATTTAATTTTTTTGTGTGATTTACATTCTACTAATATTGATATCATATAAGTTAACTGATAAAAATCTGCGAGCCCTATTTTATTGGGGTTTTGTGGTATGTCAAATGTTCTGAGCTACTACGTTTGGAACAGGTGGATTACTCATGTACCCCAGAAGAAGTACAGCAACATTTTCAGTCATGTGGAACTGTAAACAGAATCACTATTCGCACCGATAAGTTTGGACAACCGAAGGGCTATGCGTATGTTGAATTCCTTGAGACAGAAGCTGTTCAAGAGGCCCTCCTTCTGAATGAATCAGAACTGCATGGTCGACAGCTGAAGGTTAACACAAGTTTTATATATTACTAGATTAATGTTAGTTTAAGATTTTTCTACGGGGAAAAAAAATGAATTTTTAAGTATGTTGCAGGTAACTGCCAAGAGAACAAACATACCCGGGATGAAGCAGTATCGTCCACGCCGATCCAATCCGTATATGGGTGCTCGATCCAGGAGCCCATATGTTGCTCCTCCTTATTTCTTCTCACCATTTGGATACGGGTATGATCATTATTGAATATAAATTTCCAATGCAGACCGCTTGCATCTCTTCCTCTCTTCCAAGTCGTTTAACATAGTTCTTTCTGTTGCAGGAAAGTCCCAAGGTTCAGAATGCCAACGCGTTACGGCCCCTACTATTGAATGTTATTTTTGTTTGGGGCATTGTTGAATTAGAGATATCGTACTTAAATGTGTTTGCATGCCCTTTTGTTTTTTTTATGAAGGAAATTGATGTTTGGATATAATTTTAAGAGATCTTTTCCTGTTTAAAAGAAATGGAGTGTGAGCAAGCACGACGCAGGTCAATCCCTTCGAGCTCTATCACTGTGTATAGAAGAAGGTTCCTCTGGACTTGCTGCAGGTACGTTTTCATGATCTTAAGTATTTCACTTTGGAATTTTGTGCATTGTGTTTGAAGCTAAAAATAGAACCCACTACATACTGGTATTAAACGTTCTATATATTGAGTGCTTGCTATTTTGGTTCAATTCTGTGCATAGATTTATTTGGTTTTGTTTGCCCCCATC

mRNA sequence

AATTAAAAAGGTTTAAAGACGAAATTGGCGAAAGGTTAAAGTTGTAGGGTTAACCGTAATTTTACCATTAAAAGAGGGGAAAGGTGCGTAAGCTATAGGAGCCGGGTTGAACACAAATTTACTGTTAACTCCCTTTGAGGGAAAGGGGAGAGAGACTGAGAGAGAGACGGAGAGACGAAGGGGCGGAGGGGCGAAGGAGAAGCCATGGAGCACGAAGACGTCGACATGATTGGCTTGGAGACCAACGATGCTGCGGAGTTAGATGACATGAAGAAGCGGTTGAAAGAGATGGAAGATGAAGCTGCTGCTCTACGTGAGATGCAAGCCAAGGTCGAGAAGGAAATGAGTTCTGTACAAGATCCAGCAAGTGCTGCTGCAAGTCAAGCAAATAGGGAGGAAGTGGATGCACGGTCAGTGTTTGTTGGCAATGTGGATTACTCATGTACCCCAGAAGAAGTACAGCAACATTTTCAGTCATGTGGAACTGTAAACAGAATCACTATTCGCACCGATAAGTTTGGACAACCGAAGGGCTATGCGTATGTTGAATTCCTTGAGACAGAAGCTGTTCAAGAGGCCCTCCTTCTGAATGAATCAGAACTGCATGGTCGACAGCTGAAGGTAACTGCCAAGAGAACAAACATACCCGGGATGAAGCAGTATCGTCCACGCCGATCCAATCCGTATATGGGTGCTCGATCCAGGAGCCCATATGTTGCTCCTCCTTATTTCTTCTCACCATTTGGATACGGGAAAGTCCCAAGGTTCAGAATGCCAACGCGTTACGGCCCCTACTATTGAATGTTATTTTTGTTTGGGGCATTGTTGAATTAGAGATATCGTACTTAAATGTGTTTGCATGCCCTTTTGTTTTTTTTATGAAGGAAATTGATGTTTGGATATAATTTTAAGAGATCTTTTCCTGTTTAAAAGAAATGGAGTGTGAGCAAGCACGACGCAGGTCAATCCCTTCGAGCTCTATCACTGTGTATAGAAGAAGGTTCCTCTGGACTTGCTGCAGGTACGTTTTCATGATCTTAAGTATTTCACTTTGGAATTTTGTGCATTGTGTTTGAAGCTAAAAATAGAACCCACTACATACTGGTATTAAACGTTCTATATATTGAGTGCTTGCTATTTTGGTTCAATTCTGTGCATAGATTTATTTGGTTTTGTTTGCCCCCATC

Coding sequence (CDS)

ATGGAGCACGAAGACGTCGACATGATTGGCTTGGAGACCAACGATGCTGCGGAGTTAGATGACATGAAGAAGCGGTTGAAAGAGATGGAAGATGAAGCTGCTGCTCTACGTGAGATGCAAGCCAAGGTCGAGAAGGAAATGAGTTCTGTACAAGATCCAGCAAGTGCTGCTGCAAGTCAAGCAAATAGGGAGGAAGTGGATGCACGGTCAGTGTTTGTTGGCAATGTGGATTACTCATGTACCCCAGAAGAAGTACAGCAACATTTTCAGTCATGTGGAACTGTAAACAGAATCACTATTCGCACCGATAAGTTTGGACAACCGAAGGGCTATGCGTATGTTGAATTCCTTGAGACAGAAGCTGTTCAAGAGGCCCTCCTTCTGAATGAATCAGAACTGCATGGTCGACAGCTGAAGGTAACTGCCAAGAGAACAAACATACCCGGGATGAAGCAGTATCGTCCACGCCGATCCAATCCGTATATGGGTGCTCGATCCAGGAGCCCATATGTTGCTCCTCCTTATTTCTTCTCACCATTTGGATACGGGAAAGTCCCAAGGTTCAGAATGCCAACGCGTTACGGCCCCTACTATTGA

Protein sequence

MEHEDVDMIGLETNDAAELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKFGQPKGYAYVEFLETEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPYMGARSRSPYVAPPYFFSPFGYGKVPRFRMPTRYGPYY
Homology
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BLAST of CmoCh16G002650 vs. ExPASy Swiss-Prot
Match: Q9FJN9 (Polyadenylate-binding protein 2 OS=Arabidopsis thaliana OX=3702 GN=PABN2 PE=1 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 1.8e-75
Identity = 145/193 (75.13%), Postives = 166/193 (86.01%), Query Frame = 0 

Query: 5   DVDMIGLETNDAAELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANRE 64
           D+DM   + +   ELD+MKKRLKEMEDEAAALREMQAKVEKEM + QDPAS AA+QA +E
Sbjct: 29  DLDMAAADDDAVKELDEMKKRLKEMEDEAAALREMQAKVEKEMGA-QDPASIAANQAGKE 88

Query: 65  EVDARSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKFGQPKGYAYVEFLETEAVQE 124
           EVDARSVFVGNVDY+CTPEEVQQHFQ+CGTV+R+TI TDKFGQPKG+AYVEF+E EAVQE
Sbjct: 89  EVDARSVFVGNVDYACTPEEVQQHFQTCGTVHRVTILTDKFGQPKGFAYVEFVEVEAVQE 148

Query: 125 ALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPYMGARSRSPYVAPPYFFSPFGYGK 184
           AL LNESELHGRQLKV  KRTN+PG+KQ+R RR NPYMG R R P+++ PY +SP+GYGK
Sbjct: 149 ALQLNESELHGRQLKVLQKRTNVPGLKQFRGRRFNPYMGYRFRRPFMS-PYMYSPYGYGK 208

Query: 185 VPRFRMPTRYGPY 198
            PRFR P RY PY
Sbjct: 209 APRFRRPMRYMPY 219

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BLAST of CmoCh16G002650 vs. ExPASy Swiss-Prot
Match: Q9LX90 (Polyadenylate-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=PABN3 PE=1 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 9.2e-75
Identity = 142/193 (73.58%), Postives = 162/193 (83.94%), Query Frame = 0 

Query: 5   DVDMIGLETNDAAELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANRE 64
           D+DM   + +   EL +MK+RLKEME+EAAALREMQAKVEKEM + QDPAS AA+Q  +E
Sbjct: 25  DIDMSAADEDAVTELAEMKRRLKEMEEEAAALREMQAKVEKEMGATQDPASMAANQEGKE 84

Query: 65  EVDARSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKFGQPKGYAYVEFLETEAVQE 124
           EVDARSV+VGNVDY+CTPEEVQ HFQ+CGTVNR+TI  DKFGQPKG+AYVEF+E EAVQE
Sbjct: 85  EVDARSVYVGNVDYACTPEEVQLHFQTCGTVNRVTILMDKFGQPKGFAYVEFVEVEAVQE 144

Query: 125 ALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPYMGARSRSPYVAPPYFFSPFGYGK 184
           AL LNESELHGRQLKV+ KRTN+PGMKQY P R NP MG R R P+V PPYF+SP+GYGK
Sbjct: 145 ALQLNESELHGRQLKVSPKRTNVPGMKQYHPGRFNPSMGYRFRRPFV-PPYFYSPYGYGK 204

Query: 185 VPRFRMPTRYGPY 198
            PRFR P RY PY
Sbjct: 205 APRFRRPMRYMPY 216

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BLAST of CmoCh16G002650 vs. ExPASy Swiss-Prot
Match: Q93VI4 (Polyadenylate-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=PABN1 PE=1 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 5.2e-62
Identity = 121/184 (65.76%), Postives = 149/184 (80.98%), Query Frame = 0 

Query: 14  NDAAELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDARSVFV 73
           + + +L+DMKKR+KE+E+EA ALREMQAK EK+M + QDP S   S A +EEVD+RS++V
Sbjct: 49  SSSRDLEDMKKRIKEIEEEAGALREMQAKAEKDMGASQDP-SGGVSAAEKEEVDSRSIYV 108

Query: 74  GNVDYSCTPEEVQQHFQSCGTVNRITIRTDKFGQPKGYAYVEFLETEAVQEALLLNESEL 133
           GNVDY+CTPEEVQQHFQSCGTVNR+TI TDKFGQPKG+AYVEF+E EAVQ +L+LNESEL
Sbjct: 109 GNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEVEAVQNSLILNESEL 168

Query: 134 HGRQLKVTAKRTNIPGMKQYRPRRSNPYMGARSRSPYVAPPYFFSPFGYGKVPRFRMPTR 193
           HGRQ+KV+AKRTN+PGM+Q+R  R  P+   R   P V    F+ P+ YG+VPRFR P R
Sbjct: 169 HGRQIKVSAKRTNVPGMRQFR-GRGRPFRPMRGFMPGVP---FYPPYAYGRVPRFRRPMR 227

Query: 194 YGPY 198
           Y PY
Sbjct: 229 YRPY 227

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BLAST of CmoCh16G002650 vs. ExPASy Swiss-Prot
Match: O14327 (Polyadenylate-binding protein 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=pab2 PE=1 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 6.6e-33
Identity = 87/175 (49.71%), Postives = 113/175 (64.57%), Query Frame = 0 

Query: 7   DMIGLETNDAAELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEV 66
           D   L+T +  EL +MK+R+ EME EAA LR MQ +++ E  ++++         ++E +
Sbjct: 3   DQDALDTQE-KELLEMKERVAEMEAEAAKLRAMQEQLDNETEALRN---------DKESI 62

Query: 67  DARSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKF-GQPKGYAYVEFLETEAVQEA 126
           DA+SV+VGNVDYS TPEE+Q HF SCG+VNR+TI  DKF G PKG+AY+EF E   V  A
Sbjct: 63  DAQSVYVGNVDYSVTPEELQSHFASCGSVNRVTILCDKFTGHPKGFAYIEFSEPSLVPNA 122

Query: 127 LLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPYMGARSRSPYVAPPYFFSPF 181
           LLLN S LH R LKVT KRTN+PGM + R R      G R R  Y      F+P+
Sbjct: 123 LLLNGSMLHERPLKVTPKRTNVPGMSRGRGRGRGRGRG-RGRGGYRGRARGFAPY 166

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BLAST of CmoCh16G002650 vs. ExPASy Swiss-Prot
Match: Q9DDY9 (Polyadenylate-binding protein 2-A OS=Xenopus laevis OX=8355 GN=pabpn1-a PE=2 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.6e-31
Identity = 87/194 (44.85%), Postives = 122/194 (62.89%), Query Frame = 0 

Query: 2   EHEDVDMIGLETNDAAELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAA---A 61
           E E  ++ G +T +  EL+ +K R++EME+EA  L+E+Q +VEK+M+    P +A     
Sbjct: 93  EEEPGELTGDQTIEDPELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIM 152

Query: 62  SQANREEVDARSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKF-GQPKGYAYVEFL 121
           S   + E DARS++VGNVDY  T EE++ HF  CG+VNR+TI  DKF G PKG+AY+EF 
Sbjct: 153 SVEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKGFAYIEFC 212

Query: 122 ETEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPYMGARSR-SPYVAPPYF 181
           + E+V+ +L L+ES   GRQ+KV  KRTN PG+      R  P    R+R S Y +   F
Sbjct: 213 DKESVRTSLALDESLFRGRQIKVVPKRTNRPGIS--TTDRGFPRARYRARASSYSSRSRF 272

Query: 182 FSPFGYGKVPRFRM 191
           +S  GY   PR R+
Sbjct: 273 YS--GYTPRPRGRV 282

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BLAST of CmoCh16G002650 vs. ExPASy TrEMBL
Match: A0A6J1E8B7 (polyadenylate-binding protein 2-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430800 PE=4 SV=1)

HSP 1 Score: 389.4 bits (999), Expect = 8.8e-105
Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 0 

Query: 1   MEHEDVDMIGLETNDAAELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQ 60
           MEHEDVDMIGLETNDAAELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQ
Sbjct: 1   MEHEDVDMIGLETNDAAELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQ 60

Query: 61  ANREEVDARSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKFGQPKGYAYVEFLETE 120
           ANREEVDARSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKFGQPKGYAYVEFLETE
Sbjct: 61  ANREEVDARSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKFGQPKGYAYVEFLETE 120

Query: 121 AVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPYMGARSRSPYVAPPYFFSPF 180
           AVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPYMGARSRSPYVAPPYFFSPF
Sbjct: 121 AVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPYMGARSRSPYVAPPYFFSPF 180

Query: 181 GYGKVPRFRMPTRYGPYY 199
           GYGKVPRFRMPTRYGPYY
Sbjct: 181 GYGKVPRFRMPTRYGPYY 198

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BLAST of CmoCh16G002650 vs. ExPASy TrEMBL
Match: A0A6J1JC38 (polyadenylate-binding protein 2-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111483107 PE=4 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 4.4e-104
Identity = 196/198 (98.99%), Postives = 198/198 (100.00%), Query Frame = 0 

Query: 1   MEHEDVDMIGLETNDAAELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQ 60
           MEHEDVDMIGLETNDAAELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQ
Sbjct: 1   MEHEDVDMIGLETNDAAELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQ 60

Query: 61  ANREEVDARSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKFGQPKGYAYVEFLETE 120
           ANREEVDARSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKFGQPKGYAYVEFLETE
Sbjct: 61  ANREEVDARSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKFGQPKGYAYVEFLETE 120

Query: 121 AVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPYMGARSRSPYVAPPYFFSPF 180
           AVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPYMGARSR+PYVAPPYFFSP+
Sbjct: 121 AVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPYMGARSRNPYVAPPYFFSPY 180

Query: 181 GYGKVPRFRMPTRYGPYY 199
           GYGKVPRFRMPTRYGPYY
Sbjct: 181 GYGKVPRFRMPTRYGPYY 198

[Close]
BLAST of CmoCh16G002650 vs. ExPASy TrEMBL
Match: A0A6J1CGQ3 (polyadenylate-binding protein 2-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111011513 PE=4 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 1.9e-99
Identity = 190/198 (95.96%), Postives = 194/198 (97.98%), Query Frame = 0 

Query: 1   MEHEDVDMIGLETNDAAELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQ 60
           MEHED+DMIG E+NDA ELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQ
Sbjct: 1   MEHEDIDMIGSESNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQ 60

Query: 61  ANREEVDARSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKFGQPKGYAYVEFLETE 120
           ANREEVDARSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKFGQPKGYAYVEFLE E
Sbjct: 61  ANREEVDARSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKFGQPKGYAYVEFLEPE 120

Query: 121 AVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPYMGARSRSPYVAPPYFFSPF 180
           AVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNP+MGARSRSPYVA PYFFSP+
Sbjct: 121 AVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVA-PYFFSPY 180

Query: 181 GYGKVPRFRMPTRYGPYY 199
           GYGKVPRFRMPTRYGPYY
Sbjct: 181 GYGKVPRFRMPTRYGPYY 197

[Close]
BLAST of CmoCh16G002650 vs. ExPASy TrEMBL
Match: A0A5A7V2R3 (Polyadenylate-binding protein 2-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold652G00160 PE=4 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 3.6e-98
Identity = 186/198 (93.94%), Postives = 194/198 (97.98%), Query Frame = 0 

Query: 1   MEHEDVDMIGLETNDAAELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQ 60
           MEH+D+DMIG +TNDA ELDDMKKRLK+MEDEAAALREMQAKVEKEMSSVQDPASAAASQ
Sbjct: 1   MEHDDIDMIGSDTNDAVELDDMKKRLKDMEDEAAALREMQAKVEKEMSSVQDPASAAASQ 60

Query: 61  ANREEVDARSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKFGQPKGYAYVEFLETE 120
           ANREEVD+RSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKFGQPKGYAYVEF+E E
Sbjct: 61  ANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKFGQPKGYAYVEFVEPE 120

Query: 121 AVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPYMGARSRSPYVAPPYFFSPF 180
           AVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNP+MGARSRSPYVA PYFFSP+
Sbjct: 121 AVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVA-PYFFSPY 180

Query: 181 GYGKVPRFRMPTRYGPYY 199
           GYGKVPRFRMPTRYGPYY
Sbjct: 181 GYGKVPRFRMPTRYGPYY 197

[Close]
BLAST of CmoCh16G002650 vs. ExPASy TrEMBL
Match: A0A1S3CHX7 (polyadenylate-binding protein 2-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501153 PE=4 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 3.6e-98
Identity = 186/198 (93.94%), Postives = 194/198 (97.98%), Query Frame = 0 

Query: 1   MEHEDVDMIGLETNDAAELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQ 60
           MEH+D+DMIG +TNDA ELDDMKKRLK+MEDEAAALREMQAKVEKEMSSVQDPASAAASQ
Sbjct: 1   MEHDDIDMIGSDTNDAVELDDMKKRLKDMEDEAAALREMQAKVEKEMSSVQDPASAAASQ 60

Query: 61  ANREEVDARSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKFGQPKGYAYVEFLETE 120
           ANREEVD+RSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKFGQPKGYAYVEF+E E
Sbjct: 61  ANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKFGQPKGYAYVEFVEPE 120

Query: 121 AVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPYMGARSRSPYVAPPYFFSPF 180
           AVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNP+MGARSRSPYVA PYFFSP+
Sbjct: 121 AVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVA-PYFFSPY 180

Query: 181 GYGKVPRFRMPTRYGPYY 199
           GYGKVPRFRMPTRYGPYY
Sbjct: 181 GYGKVPRFRMPTRYGPYY 197

[Close]
BLAST of CmoCh16G002650 vs. NCBI nr
Match: XP_022922978.1 (polyadenylate-binding protein 2-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 389.4 bits (999), Expect = 1.8e-104
Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 0 

Query: 1   MEHEDVDMIGLETNDAAELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQ 60
           MEHEDVDMIGLETNDAAELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQ
Sbjct: 1   MEHEDVDMIGLETNDAAELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQ 60

Query: 61  ANREEVDARSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKFGQPKGYAYVEFLETE 120
           ANREEVDARSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKFGQPKGYAYVEFLETE
Sbjct: 61  ANREEVDARSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKFGQPKGYAYVEFLETE 120

Query: 121 AVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPYMGARSRSPYVAPPYFFSPF 180
           AVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPYMGARSRSPYVAPPYFFSPF
Sbjct: 121 AVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPYMGARSRSPYVAPPYFFSPF 180

Query: 181 GYGKVPRFRMPTRYGPYY 199
           GYGKVPRFRMPTRYGPYY
Sbjct: 181 GYGKVPRFRMPTRYGPYY 198

[Close]
BLAST of CmoCh16G002650 vs. NCBI nr
Match: XP_023552244.1 (polyadenylate-binding protein 2-like isoform X1 [Cucurbita pepo subsp. pepo] >KAG6576852.1 Polyadenylate-binding protein 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 388.3 bits (996), Expect = 4.1e-104
Identity = 197/198 (99.49%), Postives = 198/198 (100.00%), Query Frame = 0 

Query: 1   MEHEDVDMIGLETNDAAELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQ 60
           MEHEDVDMIGLETNDAAELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQ
Sbjct: 1   MEHEDVDMIGLETNDAAELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQ 60

Query: 61  ANREEVDARSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKFGQPKGYAYVEFLETE 120
           ANREEVDARSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKFGQPKGYAYVEFLETE
Sbjct: 61  ANREEVDARSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKFGQPKGYAYVEFLETE 120

Query: 121 AVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPYMGARSRSPYVAPPYFFSPF 180
           AVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPYMGARSRSPYVAPPYFFSP+
Sbjct: 121 AVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPYMGARSRSPYVAPPYFFSPY 180

Query: 181 GYGKVPRFRMPTRYGPYY 199
           GYGKVPRFRMPTRYGPYY
Sbjct: 181 GYGKVPRFRMPTRYGPYY 198

[Close]
BLAST of CmoCh16G002650 vs. NCBI nr
Match: XP_022985014.1 (polyadenylate-binding protein 2-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 387.1 bits (993), Expect = 9.0e-104
Identity = 196/198 (98.99%), Postives = 198/198 (100.00%), Query Frame = 0 

Query: 1   MEHEDVDMIGLETNDAAELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQ 60
           MEHEDVDMIGLETNDAAELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQ
Sbjct: 1   MEHEDVDMIGLETNDAAELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQ 60

Query: 61  ANREEVDARSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKFGQPKGYAYVEFLETE 120
           ANREEVDARSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKFGQPKGYAYVEFLETE
Sbjct: 61  ANREEVDARSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKFGQPKGYAYVEFLETE 120

Query: 121 AVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPYMGARSRSPYVAPPYFFSPF 180
           AVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPYMGARSR+PYVAPPYFFSP+
Sbjct: 121 AVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPYMGARSRNPYVAPPYFFSPY 180

Query: 181 GYGKVPRFRMPTRYGPYY 199
           GYGKVPRFRMPTRYGPYY
Sbjct: 181 GYGKVPRFRMPTRYGPYY 198

[Close]
BLAST of CmoCh16G002650 vs. NCBI nr
Match: KAG7014873.1 (Polyadenylate-binding protein 3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 381.3 bits (978), Expect = 5.0e-102
Identity = 196/198 (98.99%), Postives = 197/198 (99.49%), Query Frame = 0 

Query: 1   MEHEDVDMIGLETNDAAELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQ 60
           MEHEDVDMIGLETNDAAELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQ
Sbjct: 1   MEHEDVDMIGLETNDAAELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQ 60

Query: 61  ANREEVDARSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKFGQPKGYAYVEFLETE 120
           ANREEVDARSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKFGQPKGYAYVEFLETE
Sbjct: 61  ANREEVDARSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKFGQPKGYAYVEFLETE 120

Query: 121 AVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPYMGARSRSPYVAPPYFFSPF 180
           AVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPYMGARSRSPYVA PYFFSP+
Sbjct: 121 AVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPYMGARSRSPYVA-PYFFSPY 180

Query: 181 GYGKVPRFRMPTRYGPYY 199
           GYGKVPRFRMPTRYGPYY
Sbjct: 181 GYGKVPRFRMPTRYGPYY 197

[Close]
BLAST of CmoCh16G002650 vs. NCBI nr
Match: XP_022140995.1 (polyadenylate-binding protein 2-like isoform X1 [Momordica charantia])

HSP 1 Score: 371.7 bits (953), Expect = 3.9e-99
Identity = 190/198 (95.96%), Postives = 194/198 (97.98%), Query Frame = 0 

Query: 1   MEHEDVDMIGLETNDAAELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQ 60
           MEHED+DMIG E+NDA ELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQ
Sbjct: 1   MEHEDIDMIGSESNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQ 60

Query: 61  ANREEVDARSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKFGQPKGYAYVEFLETE 120
           ANREEVDARSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKFGQPKGYAYVEFLE E
Sbjct: 61  ANREEVDARSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKFGQPKGYAYVEFLEPE 120

Query: 121 AVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPYMGARSRSPYVAPPYFFSPF 180
           AVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNP+MGARSRSPYVA PYFFSP+
Sbjct: 121 AVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVA-PYFFSPY 180

Query: 181 GYGKVPRFRMPTRYGPYY 199
           GYGKVPRFRMPTRYGPYY
Sbjct: 181 GYGKVPRFRMPTRYGPYY 197

[Close]
BLAST of CmoCh16G002650 vs. TAIR 10
Match: AT5G65260.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 283.5 bits (724), Expect = 1.3e-76
Identity = 145/193 (75.13%), Postives = 166/193 (86.01%), Query Frame = 0 

Query: 5   DVDMIGLETNDAAELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANRE 64
           D+DM   + +   ELD+MKKRLKEMEDEAAALREMQAKVEKEM + QDPAS AA+QA +E
Sbjct: 29  DLDMAAADDDAVKELDEMKKRLKEMEDEAAALREMQAKVEKEMGA-QDPASIAANQAGKE 88

Query: 65  EVDARSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKFGQPKGYAYVEFLETEAVQE 124
           EVDARSVFVGNVDY+CTPEEVQQHFQ+CGTV+R+TI TDKFGQPKG+AYVEF+E EAVQE
Sbjct: 89  EVDARSVFVGNVDYACTPEEVQQHFQTCGTVHRVTILTDKFGQPKGFAYVEFVEVEAVQE 148

Query: 125 ALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPYMGARSRSPYVAPPYFFSPFGYGK 184
           AL LNESELHGRQLKV  KRTN+PG+KQ+R RR NPYMG R R P+++ PY +SP+GYGK
Sbjct: 149 ALQLNESELHGRQLKVLQKRTNVPGLKQFRGRRFNPYMGYRFRRPFMS-PYMYSPYGYGK 208

Query: 185 VPRFRMPTRYGPY 198
            PRFR P RY PY
Sbjct: 209 APRFRRPMRYMPY 219

[Close]
BLAST of CmoCh16G002650 vs. TAIR 10
Match: AT5G10350.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 281.2 bits (718), Expect = 6.5e-76
Identity = 142/193 (73.58%), Postives = 162/193 (83.94%), Query Frame = 0 

Query: 5   DVDMIGLETNDAAELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANRE 64
           D+DM   + +   EL +MK+RLKEME+EAAALREMQAKVEKEM + QDPAS AA+Q  +E
Sbjct: 25  DIDMSAADEDAVTELAEMKRRLKEMEEEAAALREMQAKVEKEMGATQDPASMAANQEGKE 84

Query: 65  EVDARSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKFGQPKGYAYVEFLETEAVQE 124
           EVDARSV+VGNVDY+CTPEEVQ HFQ+CGTVNR+TI  DKFGQPKG+AYVEF+E EAVQE
Sbjct: 85  EVDARSVYVGNVDYACTPEEVQLHFQTCGTVNRVTILMDKFGQPKGFAYVEFVEVEAVQE 144

Query: 125 ALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPYMGARSRSPYVAPPYFFSPFGYGK 184
           AL LNESELHGRQLKV+ KRTN+PGMKQY P R NP MG R R P+V PPYF+SP+GYGK
Sbjct: 145 ALQLNESELHGRQLKVSPKRTNVPGMKQYHPGRFNPSMGYRFRRPFV-PPYFYSPYGYGK 204

Query: 185 VPRFRMPTRYGPY 198
            PRFR P RY PY
Sbjct: 205 APRFRRPMRYMPY 216

[Close]
BLAST of CmoCh16G002650 vs. TAIR 10
Match: AT5G10350.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 260.0 bits (663), Expect = 1.6e-69
Identity = 132/179 (73.74%), Postives = 152/179 (84.92%), Query Frame = 0 

Query: 5   DVDMIGLETNDAAELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANRE 64
           D+DM   + +   EL +MK+RLKEME+EAAALREMQAKVEKEM + QDPAS AA+Q  +E
Sbjct: 25  DIDMSAADEDAVTELAEMKRRLKEMEEEAAALREMQAKVEKEMGATQDPASMAANQEGKE 84

Query: 65  EVDARSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKFGQPKGYAYVEFLETEAVQE 124
           EVDARSV+VGNVDY+CTPEEVQ HFQ+CGTVNR+TI  DKFGQPKG+AYVEF+E EAVQE
Sbjct: 85  EVDARSVYVGNVDYACTPEEVQLHFQTCGTVNRVTILMDKFGQPKGFAYVEFVEVEAVQE 144

Query: 125 ALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPYMGARSRSPYVAPPYFFSPFGYG 184
           AL LNESELHGRQLKV+ KRTN+PGMKQY P R NP MG R R P+V PPYF+SP+GYG
Sbjct: 145 ALQLNESELHGRQLKVSPKRTNVPGMKQYHPGRFNPSMGYRFRRPFV-PPYFYSPYGYG 202

[Close]
BLAST of CmoCh16G002650 vs. TAIR 10
Match: AT5G51120.1 (polyadenylate-binding protein 1 )

HSP 1 Score: 238.8 bits (608), Expect = 3.7e-63
Identity = 121/184 (65.76%), Postives = 149/184 (80.98%), Query Frame = 0 

Query: 14  NDAAELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDARSVFV 73
           + + +L+DMKKR+KE+E+EA ALREMQAK EK+M + QDP S   S A +EEVD+RS++V
Sbjct: 49  SSSRDLEDMKKRIKEIEEEAGALREMQAKAEKDMGASQDP-SGGVSAAEKEEVDSRSIYV 108

Query: 74  GNVDYSCTPEEVQQHFQSCGTVNRITIRTDKFGQPKGYAYVEFLETEAVQEALLLNESEL 133
           GNVDY+CTPEEVQQHFQSCGTVNR+TI TDKFGQPKG+AYVEF+E EAVQ +L+LNESEL
Sbjct: 109 GNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEVEAVQNSLILNESEL 168

Query: 134 HGRQLKVTAKRTNIPGMKQYRPRRSNPYMGARSRSPYVAPPYFFSPFGYGKVPRFRMPTR 193
           HGRQ+KV+AKRTN+PGM+Q+R  R  P+   R   P V    F+ P+ YG+VPRFR P R
Sbjct: 169 HGRQIKVSAKRTNVPGMRQFR-GRGRPFRPMRGFMPGVP---FYPPYAYGRVPRFRRPMR 227

Query: 194 YGPY 198
           Y PY
Sbjct: 229 YRPY 227

[Close]
BLAST of CmoCh16G002650 vs. TAIR 10
Match: AT5G51120.2 (polyadenylate-binding protein 1 )

HSP 1 Score: 218.0 bits (554), Expect = 6.8e-57
Identity = 118/221 (53.39%), Postives = 149/221 (67.42%), Query Frame = 0 

Query: 14  NDAAELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQ---------------------- 73
           + + +L+DMKKR+KE+E+EA ALREMQAK EK+M + Q                      
Sbjct: 49  SSSRDLEDMKKRIKEIEEEAGALREMQAKAEKDMGASQGLKLVLLIMILLWVYILESFSE 108

Query: 74  ---------------DPASAAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQSCGTVN 133
                          +  ++  S A +EEVD+RS++VGNVDY+CTPEEVQQHFQSCGTVN
Sbjct: 109 SMNLSRNLLEFEYEKEIINSGVSAAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVN 168

Query: 134 RITIRTDKFGQPKGYAYVEFLETEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPR 193
           R+TI TDKFGQPKG+AYVEF+E EAVQ +L+LNESELHGRQ+KV+AKRTN+PGM+Q+R  
Sbjct: 169 RVTILTDKFGQPKGFAYVEFVEVEAVQNSLILNESELHGRQIKVSAKRTNVPGMRQFR-G 228

Query: 194 RSNPYMGARSRSPYVAPPYFFSPFGYGKVPRFRMPTRYGPY 198
           R  P+   R   P V    F+ P+ YG+VPRFR P RY PY
Sbjct: 229 RGRPFRPMRGFMPGVP---FYPPYAYGRVPRFRRPMRYRPY 265

The following BLAST results are available for this feature:
BLAST of CmoCh16G002650 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FJN91.8e-7575.13Polyadenylate-binding protein 2 OS=Arabidopsis thaliana OX=3702 GN=PABN2 PE=1 SV... [more]
Q9LX909.2e-7573.58Polyadenylate-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=PABN3 PE=1 SV... [more]
Q93VI45.2e-6265.76Polyadenylate-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=PABN1 PE=1 SV... [more]
O143276.6e-3349.71Polyadenylate-binding protein 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC ... [more]
Q9DDY91.6e-3144.85Polyadenylate-binding protein 2-A OS=Xenopus laevis OX=8355 GN=pabpn1-a PE=2 SV=... [more]
BLAST of CmoCh16G002650 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1E8B78.8e-105100.00polyadenylate-binding protein 2-like isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1JC384.4e-10498.99polyadenylate-binding protein 2-like isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1CGQ31.9e-9995.96polyadenylate-binding protein 2-like isoform X1 OS=Momordica charantia OX=3673 G... [more]
A0A5A7V2R33.6e-9893.94Polyadenylate-binding protein 2-like isoform X2 OS=Cucumis melo var. makuwa OX=1... [more]
A0A1S3CHX73.6e-9893.94polyadenylate-binding protein 2-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
BLAST of CmoCh16G002650 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022922978.11.8e-104100.00polyadenylate-binding protein 2-like isoform X1 [Cucurbita moschata][more]
XP_023552244.14.1e-10499.49polyadenylate-binding protein 2-like isoform X1 [Cucurbita pepo subsp. pepo] >KA... [more]
XP_022985014.19.0e-10498.99polyadenylate-binding protein 2-like isoform X1 [Cucurbita maxima][more]
KAG7014873.15.0e-10298.99Polyadenylate-binding protein 3 [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022140995.13.9e-9995.96polyadenylate-binding protein 2-like isoform X1 [Momordica charantia][more]
BLAST of CmoCh16G002650 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G65260.11.3e-7675.13RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT5G10350.16.5e-7673.58RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT5G10350.21.6e-6973.74RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT5G51120.13.7e-6365.76polyadenylate-binding protein 1 [more]
AT5G51120.26.8e-5753.39polyadenylate-binding protein 1 [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 12..46
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 42..64
NoneNo IPR availablePANTHERPTHR23236:SF79SUBFAMILY NOT NAMEDcoord: 4..194
NoneNo IPR availablePANTHERPTHR23236EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4Hcoord: 4..194
NoneNo IPR availableCDDcd12306RRM_II_PABPscoord: 70..141
e-value: 1.16067E-48
score: 151.29
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 70..141
e-value: 5.7E-22
score: 89.0
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 71..139
e-value: 7.7E-17
score: 60.9
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 69..145
score: 16.84124
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 11..142
e-value: 3.4E-28
score: 100.4
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 60..167

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh16G002650.1CmoCh16G002650.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003723 RNA binding
molecular_function GO:0003676 nucleic acid binding