CmoCh16G002540 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh16G002540
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Protein of unknown function (DUF1218)
Location	Cmo_Chr16: 1133354 .. 1135522 (+)
RNA-Seq Expression	CmoCh16G002540
Synteny	CmoCh16G002540

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTACTCCAACCGCCACATCCTCCCCTAATGGAATCCAAATTTCGTAGGAACTTCCTCTTCTTCAGTCATCGGACGCAACGTCACATTTCAGCGCCTGTCAATTTCTCTCTCAATATCTTCTTCTACCGTCTCCGCCACAGGTTCTTCGTATCGAAATCTCGGCCTTAATCCGAAGCTCCACCGAAACACGTAGGTTATTTCTCCCAGTAACTTGCCGGAAACTATCGGCGGCGGCAGAGATGGAGAGAAAGGCTCTGGCGGTGTGCTCCGTAGTCGCTTTTTTGGGGCTTTTGTTGGTCGCTACTGGCTTCGCCGCTGAGGGTACAAGAGTTAAGGTGAGATGCCTTTTCTTAACAATCACGTATTGATTTAGTGATTTTTCTTCGGTGAATTATCTGTTTGGCTGATGAGAAAATCCGTCAGAAAGAATGTGAAAGGATAGCGAGAGGAGATTCATTTTGAATAGCGATTTATAAAAAGAAGTTGTTCGTGAATGGATCTGTTGTTTTTGGCTGCTTCCTTTAAGCTGTATTTGTTTCCAAGCCCTACTGAATTGATCATCTTCTTTGTTTTTGAGGTTGAGGCCATAAACTTCCAATTATATGCAAGCGATTCAAGTAATAGTTAGAGAATTGATAATAATTTGTTTGTGATTTTCTATTTTTAGAAGTTAAGCAAATTGAGTGACAGTTTCTTCACTTTAATTTTGGTTCATAATTAGAATTTGGTTTGGGTTTAAAAAAATTACATAGTTTCCAATTTGTCCCTGAAATTTAAATTTCCTCGAGTTTTAATTTTGAGAGATCCTCGTTATGGTCTTGAGTTGTTTGAAGTTACTAATTCAGGACATAGTTCTTTGGAATTTTGTGTGGGATCCTAGCCTGATCAGTCTGATCATTTTTTCATTTGACAGGGTAATCAAGTCGTTCAAGTCACTCCTACTATGTGCAAATATCCTCAGAGTCCTGCGGCTGCCCTTGGTTTGACAGCAGCTCTGTCTCTTTTGCTTGCTCAGATATTGATAAATGTTTCGACGGGATGCATTTGTTGCACAAGGGGTCCTCGACCTCCCGCTTCTAAATGGAGAACAGCCGTTGTCTGCTTCGTTGTTTCGTGGTACTTTTCGACCCTTCCTTCCTCATTCTAGCTTGCATTTAGTTCATGGCTTGATGCTTGCTGCTTGCTGCTATAATATGAGATGAATTATATGAATGTCGATATCAAAACCCGTTTTCTCAAGATTGCAGGGTTATTCGAATTCTGCTCGGGTTCTTGATGGCTGAGTGTTATGATATTGTTTGTGATTATATGATCTTATTTCTGCTTTGAAACAATTCCATGTTTTTGTTGTCATCTTTTTGGGCTCTTCTGCGTTGTTAATTCATTATGAAAGTTGTGTTAGACTTCTTAATCCATGATCATTACAGTTGAAATGATTGAATCTATTGTTCTTCGTGAATCCCTTTGGTCGAATTATTCCCCGACTAAAAGAAAGATCGATTCCTTGTGTTTGTCGGATAAATCAAGTTTGAGCCATGGTTTTTTTTCTGCAGGTTTACATTTGTGATAGCGTTTCTCCTGTTGCTAACCGGTGCTGCACTGAACGATGGAAGGAATGAACAAAGCAGCTATTTCGATTACTACTATTGCTATGTTCTCAAACCAGGAGTTTTTGCTGTTGCCACCGTTGTGGGTGCTGCAAGTTTAGCGCTGGGATTGTTCTACTACCTCATATTGAACTCTGCAAAGAATGACCCTAATGTGTGGGGCAATCCTTCCATTCCTCCTCCAGCAAACATTGCAATGGCGCAGCCCCAATTCCCGCCCCCGCCCCCGGCTCAACCGACAACTGCAGACCCCGTATTTGTTCATGAAGACACGTACACGAGACGACAGTTCACGTGATCGGTAAGCGTCGGTCGATATCAAATGTGTTTAAGAAAACCATACAACTTATACGACTTGATTGATGTTGTCTTTATAGGAAGTAGCTGTTGTGGACTTGTATAGAACTGAATTGAATTTTTACTTCCCTTTGATCCATGGGAAATAAATAAACTGTAATTGAACAATAAGTTGATTGAAAATATTTTGATATTTGTTTATAGTAAAATACATTTTTATCATTGATGCATTTTATGTGAGACAAAAATGCTATACCCTATCC

mRNA sequence

GTTTACTCCAACCGCCACATCCTCCCCTAATGGAATCCAAATTTCGTAGGAACTTCCTCTTCTTCAGTCATCGGACGCAACGTCACATTTCAGCGCCTGTCAATTTCTCTCTCAATATCTTCTTCTACCGTCTCCGCCACAGGTTCTTCGTATCGAAATCTCGGCCTTAATCCGAAGCTCCACCGAAACACGTAGGTTATTTCTCCCAGTAACTTGCCGGAAACTATCGGCGGCGGCAGAGATGGAGAGAAAGGCTCTGGCGGTGTGCTCCGTAGTCGCTTTTTTGGGGCTTTTGTTGGTCGCTACTGGCTTCGCCGCTGAGGGTACAAGAGTTAAGGGTAATCAAGTCGTTCAAGTCACTCCTACTATGTGCAAATATCCTCAGAGTCCTGCGGCTGCCCTTGGTTTGACAGCAGCTCTGTCTCTTTTGCTTGCTCAGATATTGATAAATGTTTCGACGGGATGCATTTGTTGCACAAGGGGTCCTCGACCTCCCGCTTCTAAATGGAGAACAGCCGTTGTCTGCTTCGTTGTTTCGTGGTTTACATTTGTGATAGCGTTTCTCCTGTTGCTAACCGGTGCTGCACTGAACGATGGAAGGAATGAACAAAGCAGCTATTTCGATTACTACTATTGCTATGTTCTCAAACCAGGAGTTTTTGCTGTTGCCACCGTTGTGGGTGCTGCAAGTTTAGCGCTGGGATTGTTCTACTACCTCATATTGAACTCTGCAAAGAATGACCCTAATGTGTGGGGCAATCCTTCCATTCCTCCTCCAGCAAACATTGCAATGGCGCAGCCCCAATTCCCGCCCCCGCCCCCGGCTCAACCGACAACTGCAGACCCCGTATTTGTTCATGAAGACACGTACACGAGACGACAGTTCACGTGATCGGTAAGCGTCGGTCGATATCAAATGTGTTTAAGAAAACCATACAACTTATACGACTTGATTGATGTTGTCTTTATAGGAAGTAGCTGTTGTGGACTTGTATAGAACTGAATTGAATTTTTACTTCCCTTTGATCCATGGGAAATAAATAAACTGTAATTGAACAATAAGTTGATTGAAAATATTTTGATATTTGTTTATAGTAAAATACATTTTTATCATTGATGCATTTTATGTGAGACAAAAATGCTATACCCTATCC

Coding sequence (CDS)

ATGGAGAGAAAGGCTCTGGCGGTGTGCTCCGTAGTCGCTTTTTTGGGGCTTTTGTTGGTCGCTACTGGCTTCGCCGCTGAGGGTACAAGAGTTAAGGGTAATCAAGTCGTTCAAGTCACTCCTACTATGTGCAAATATCCTCAGAGTCCTGCGGCTGCCCTTGGTTTGACAGCAGCTCTGTCTCTTTTGCTTGCTCAGATATTGATAAATGTTTCGACGGGATGCATTTGTTGCACAAGGGGTCCTCGACCTCCCGCTTCTAAATGGAGAACAGCCGTTGTCTGCTTCGTTGTTTCGTGGTTTACATTTGTGATAGCGTTTCTCCTGTTGCTAACCGGTGCTGCACTGAACGATGGAAGGAATGAACAAAGCAGCTATTTCGATTACTACTATTGCTATGTTCTCAAACCAGGAGTTTTTGCTGTTGCCACCGTTGTGGGTGCTGCAAGTTTAGCGCTGGGATTGTTCTACTACCTCATATTGAACTCTGCAAAGAATGACCCTAATGTGTGGGGCAATCCTTCCATTCCTCCTCCAGCAAACATTGCAATGGCGCAGCCCCAATTCCCGCCCCCGCCCCCGGCTCAACCGACAACTGCAGACCCCGTATTTGTTCATGAAGACACGTACACGAGACGACAGTTCACGTGA

Protein sequence

MERKALAVCSVVAFLGLLLVATGFAAEGTRVKGNQVVQVTPTMCKYPQSPAAALGLTAALSLLLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALNDGRNEQSSYFDYYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDPNVWGNPSIPPPANIAMAQPQFPPPPPAQPTTADPVFVHEDTYTRRQFT

Homology

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BLAST of CmoCh16G002540 vs. ExPASy TrEMBL
Match: A0A6J1E6P1 (uncharacterized protein LOC111430466 OS=Cucurbita moschata OX=3662 GN=LOC111430466 PE=4 SV=1)

HSP 1 Score: 428.7 bits (1101), Expect = 1.4e-116
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MERKALAVCSVVAFLGLLLVATGFAAEGTRVKGNQVVQVTPTMCKYPQSPAAALGLTAAL 60
           MERKALAVCSVVAFLGLLLVATGFAAEGTRVKGNQVVQVTPTMCKYPQSPAAALGLTAAL
Sbjct: 1   MERKALAVCSVVAFLGLLLVATGFAAEGTRVKGNQVVQVTPTMCKYPQSPAAALGLTAAL 60

Query: 61  SLLLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALNDGR 120
           SLLLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALNDGR
Sbjct: 61  SLLLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALNDGR 120

Query: 121 NEQSSYFDYYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDPNVWGNPSIPPPA 180
           NEQSSYFDYYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDPNVWGNPSIPPPA
Sbjct: 121 NEQSSYFDYYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDPNVWGNPSIPPPA 180

Query: 181 NIAMAQPQFPPPPPAQPTTADPVFVHEDTYTRRQFT 217
           NIAMAQPQFPPPPPAQPTTADPVFVHEDTYTRRQFT
Sbjct: 181 NIAMAQPQFPPPPPAQPTTADPVFVHEDTYTRRQFT 216

[Close]

BLAST of CmoCh16G002540 vs. ExPASy TrEMBL
Match: A0A6J1CG96 (uncharacterized protein LOC111011403 OS=Momordica charantia OX=3673 GN=LOC111011403 PE=4 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 1.7e-93
Identity = 172/216 (79.63%), Postives = 190/216 (87.96%), Query Frame = 0


Query: 1   MERKALAVCSVVAFLGLLLVATGFAAEGTRVKGNQVVQVTPTMCKYPQSPAAALGLTAAL 60
           MERKA+AVCSVVAFLGLL+VATGFAAEGTR+K +QV+QVTP  C YP+SPA  LGL AAL
Sbjct: 1   MERKAVAVCSVVAFLGLLVVATGFAAEGTRIKLSQVIQVTPNTCTYPRSPALGLGLAAAL 60

Query: 61  SLLLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALNDGR 120
           SLL+AQ+ INVSTGCICC RGPRPPASKWRT VVCFV+SWFTF+IAFLLLLTGAALND R
Sbjct: 61  SLLVAQLTINVSTGCICCIRGPRPPASKWRTTVVCFVISWFTFIIAFLLLLTGAALNDRR 120

Query: 121 NEQSSYFDYYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDPNVWGNPSIPPPA 180
            E+S YF YY CYVLKPGVFAVAT++  AS+ LGLFYYLILNSAKN+P VWGNPS+PP A
Sbjct: 121 GEESYYFGYYECYVLKPGVFAVATILATASIVLGLFYYLILNSAKNNPTVWGNPSVPPQA 180

Query: 181 NIAMAQPQFPPPPPAQPTTADPVFVHEDTYTRRQFT 217
           NIAM QPQFPPPPP Q  + DPVFVHEDTY RRQ+T
Sbjct: 181 NIAMGQPQFPPPPPPQQRSGDPVFVHEDTYMRRQYT 216

[Close]

BLAST of CmoCh16G002540 vs. ExPASy TrEMBL
Match: A0A0A0KU80 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G025740 PE=4 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 2.0e-81
Identity = 159/218 (72.94%), Postives = 179/218 (82.11%), Query Frame = 0


Query: 1   MERK-ALAVCSVVAFLGLLLVATGFAAEGTRVKGNQVVQVTPTMCKYPQSPAAALGLTAA 60
           MERK AL V  VVA LG++++ATGFAAE TR K NQV +V P +CKYP+SPA  LGLTAA
Sbjct: 1   MERKSALMVKYVVAILGIVMIATGFAAEATRTKRNQVTKVAPDLCKYPRSPALGLGLTAA 60

Query: 61  LSLLLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALNDG 120
           LSLL AQI I  STGC+CC RGPRPPASKWRTAV+CF +SW T+VIAFLL LTGAALN+G
Sbjct: 61  LSLLFAQITIKASTGCVCCIRGPRPPASKWRTAVICFTISWVTYVIAFLLFLTGAALNNG 120

Query: 121 RNEQSSYFDYYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDPN-VWGNPSIPP 180
           R EQ +YF  Y CYVLKPGVF+ AT+VG ASL LG+ Y+LILNSAKNDP+ VWG+PS+PP
Sbjct: 121 RGEQRNYFRDYDCYVLKPGVFSFATIVGMASLTLGMSYFLILNSAKNDPSTVWGHPSVPP 180

Query: 181 PANIAMAQPQFPPPPPAQPTTADPVFVHEDTYTRRQFT 217
             NIAMAQPQFP PPP    TADPVFVHEDTY RRQFT
Sbjct: 181 QPNIAMAQPQFPNPPPPPQRTADPVFVHEDTYMRRQFT 218

[Close]

BLAST of CmoCh16G002540 vs. ExPASy TrEMBL
Match: A0A5D3D069 (DUF1218 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G00200 PE=4 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 3.4e-78
Identity = 156/220 (70.91%), Postives = 177/220 (80.45%), Query Frame = 0


Query: 1   MERK-ALAVCSVVAFLGLLLVATGFAAEGTRVKGNQVVQVTPTMCKYPQSPAAALGLTAA 60
           MERK AL V  VVAFLG++++ATGFAAE TR KG QV +V P +CKYP+SPA  LG TAA
Sbjct: 1   MERKAALVVKFVVAFLGIVMIATGFAAEATRTKGKQVTRVAPDVCKYPRSPAMGLGFTAA 60

Query: 61  LSLLLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALNDG 120
           LSLL AQI I  STGC+CC RGPRPP  KWRTAV+CF VSW T+VIAFLL LTGAALN+G
Sbjct: 61  LSLLFAQITIKASTGCVCCIRGPRPP--KWRTAVICFTVSWITYVIAFLLFLTGAALNNG 120

Query: 121 RNEQSSYFDYYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDPN-VWGNPSIPP 180
           R++Q +Y   Y CYVLKPGVF+ AT+VG ASL LG+ Y+LILNSAKNDP+ VWG+PS+PP
Sbjct: 121 RDQQRNYLGNYECYVLKPGVFSFATIVGVASLTLGMSYFLILNSAKNDPSTVWGHPSVPP 180

Query: 181 PANIAMAQPQF--PPPPPAQPTTADPVFVHEDTYTRRQFT 217
             NIAMAQPQF  PPPPP    T DPVFVHEDTY RRQFT
Sbjct: 181 QPNIAMAQPQFPNPPPPPPPQRTTDPVFVHEDTYMRRQFT 218

[Close]

BLAST of CmoCh16G002540 vs. ExPASy TrEMBL
Match: A0A1S3BX72 (uncharacterized protein LOC103494435 OS=Cucumis melo OX=3656 GN=LOC103494435 PE=4 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 3.4e-78
Identity = 156/220 (70.91%), Postives = 177/220 (80.45%), Query Frame = 0


Query: 1   MERK-ALAVCSVVAFLGLLLVATGFAAEGTRVKGNQVVQVTPTMCKYPQSPAAALGLTAA 60
           MERK AL V  VVAFLG++++ATGFAAE TR KG QV +V P +CKYP+SPA  LG TAA
Sbjct: 1   MERKAALVVKFVVAFLGIVMIATGFAAEATRTKGKQVTRVAPDVCKYPRSPAMGLGFTAA 60

Query: 61  LSLLLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALNDG 120
           LSLL AQI I  STGC+CC RGPRPP  KWRTAV+CF VSW T+VIAFLL LTGAALN+G
Sbjct: 61  LSLLFAQITIKASTGCVCCIRGPRPP--KWRTAVICFTVSWITYVIAFLLFLTGAALNNG 120

Query: 121 RNEQSSYFDYYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDPN-VWGNPSIPP 180
           R++Q +Y   Y CYVLKPGVF+ AT+VG ASL LG+ Y+LILNSAKNDP+ VWG+PS+PP
Sbjct: 121 RDQQRNYLGNYECYVLKPGVFSFATIVGVASLTLGMSYFLILNSAKNDPSTVWGHPSVPP 180

Query: 181 PANIAMAQPQF--PPPPPAQPTTADPVFVHEDTYTRRQFT 217
             NIAMAQPQF  PPPPP    T DPVFVHEDTY RRQFT
Sbjct: 181 QPNIAMAQPQFPNPPPPPPPQRTTDPVFVHEDTYMRRQFT 218

[Close]

BLAST of CmoCh16G002540 vs. NCBI nr
Match: XP_022922463.1 (uncharacterized protein LOC111430466 [Cucurbita moschata])

HSP 1 Score: 428.7 bits (1101), Expect = 3.0e-116
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MERKALAVCSVVAFLGLLLVATGFAAEGTRVKGNQVVQVTPTMCKYPQSPAAALGLTAAL 60
           MERKALAVCSVVAFLGLLLVATGFAAEGTRVKGNQVVQVTPTMCKYPQSPAAALGLTAAL
Sbjct: 1   MERKALAVCSVVAFLGLLLVATGFAAEGTRVKGNQVVQVTPTMCKYPQSPAAALGLTAAL 60

Query: 61  SLLLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALNDGR 120
           SLLLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALNDGR
Sbjct: 61  SLLLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALNDGR 120

Query: 121 NEQSSYFDYYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDPNVWGNPSIPPPA 180
           NEQSSYFDYYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDPNVWGNPSIPPPA
Sbjct: 121 NEQSSYFDYYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDPNVWGNPSIPPPA 180

Query: 181 NIAMAQPQFPPPPPAQPTTADPVFVHEDTYTRRQFT 217
           NIAMAQPQFPPPPPAQPTTADPVFVHEDTYTRRQFT
Sbjct: 181 NIAMAQPQFPPPPPAQPTTADPVFVHEDTYTRRQFT 216

[Close]

BLAST of CmoCh16G002540 vs. NCBI nr
Match: KAG7014863.1 (hypothetical protein SDJN02_22493 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 426.8 bits (1096), Expect = 1.1e-115
Identity = 215/216 (99.54%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MERKALAVCSVVAFLGLLLVATGFAAEGTRVKGNQVVQVTPTMCKYPQSPAAALGLTAAL 60
           MERKALAVCSVVAFLGLLLVATGFAAEGTRVKGNQVVQVTPTMCKYPQSPAAALGLTAAL
Sbjct: 1   MERKALAVCSVVAFLGLLLVATGFAAEGTRVKGNQVVQVTPTMCKYPQSPAAALGLTAAL 60

Query: 61  SLLLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALNDGR 120
           SLLLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALNDGR
Sbjct: 61  SLLLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALNDGR 120

Query: 121 NEQSSYFDYYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDPNVWGNPSIPPPA 180
           NEQSSYF+YYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDPNVWGNPSIPPPA
Sbjct: 121 NEQSSYFNYYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDPNVWGNPSIPPPA 180

Query: 181 NIAMAQPQFPPPPPAQPTTADPVFVHEDTYTRRQFT 217
           NIAMAQPQFPPPPPAQPTTADPVFVHEDTYTRRQFT
Sbjct: 181 NIAMAQPQFPPPPPAQPTTADPVFVHEDTYTRRQFT 216

[Close]

BLAST of CmoCh16G002540 vs. NCBI nr
Match: KAG6576843.1 (Protein MODIFYING WALL LIGNIN-2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 426.8 bits (1096), Expect = 1.1e-115
Identity = 215/216 (99.54%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MERKALAVCSVVAFLGLLLVATGFAAEGTRVKGNQVVQVTPTMCKYPQSPAAALGLTAAL 60
           MERKALAVCSVVAFLGLLLVATGFAAEGTRVKGNQVVQVTPTMCKYPQSPAAALGLTAAL
Sbjct: 83  MERKALAVCSVVAFLGLLLVATGFAAEGTRVKGNQVVQVTPTMCKYPQSPAAALGLTAAL 142

Query: 61  SLLLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALNDGR 120
           SLLLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALNDGR
Sbjct: 143 SLLLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALNDGR 202

Query: 121 NEQSSYFDYYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDPNVWGNPSIPPPA 180
           NEQSSYF+YYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDPNVWGNPSIPPPA
Sbjct: 203 NEQSSYFNYYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDPNVWGNPSIPPPA 262

Query: 181 NIAMAQPQFPPPPPAQPTTADPVFVHEDTYTRRQFT 217
           NIAMAQPQFPPPPPAQPTTADPVFVHEDTYTRRQFT
Sbjct: 263 NIAMAQPQFPPPPPAQPTTADPVFVHEDTYTRRQFT 298

[Close]

BLAST of CmoCh16G002540 vs. NCBI nr
Match: XP_023551924.1 (uncharacterized protein LOC111809750 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 423.7 bits (1088), Expect = 9.5e-115
Identity = 214/216 (99.07%), Postives = 214/216 (99.07%), Query Frame = 0


Query: 1   MERKALAVCSVVAFLGLLLVATGFAAEGTRVKGNQVVQVTPTMCKYPQSPAAALGLTAAL 60
           MERKALAVCSVVA LGLLLVATGFAAEGTRVKGNQVVQVTPTMCKYPQSPAAALGLTAAL
Sbjct: 1   MERKALAVCSVVAILGLLLVATGFAAEGTRVKGNQVVQVTPTMCKYPQSPAAALGLTAAL 60

Query: 61  SLLLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALNDGR 120
           SLLLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALN GR
Sbjct: 61  SLLLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALNGGR 120

Query: 121 NEQSSYFDYYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDPNVWGNPSIPPPA 180
           NEQSSYFDYYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDPNVWGNPSIPPPA
Sbjct: 121 NEQSSYFDYYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDPNVWGNPSIPPPA 180

Query: 181 NIAMAQPQFPPPPPAQPTTADPVFVHEDTYTRRQFT 217
           NIAMAQPQFPPPPPAQPTTADPVFVHEDTYTRRQFT
Sbjct: 181 NIAMAQPQFPPPPPAQPTTADPVFVHEDTYTRRQFT 216

[Close]

BLAST of CmoCh16G002540 vs. NCBI nr
Match: XP_022140830.1 (uncharacterized protein LOC111011403 [Momordica charantia])

HSP 1 Score: 352.1 bits (902), Expect = 3.5e-93
Identity = 172/216 (79.63%), Postives = 190/216 (87.96%), Query Frame = 0


Query: 1   MERKALAVCSVVAFLGLLLVATGFAAEGTRVKGNQVVQVTPTMCKYPQSPAAALGLTAAL 60
           MERKA+AVCSVVAFLGLL+VATGFAAEGTR+K +QV+QVTP  C YP+SPA  LGL AAL
Sbjct: 1   MERKAVAVCSVVAFLGLLVVATGFAAEGTRIKLSQVIQVTPNTCTYPRSPALGLGLAAAL 60

Query: 61  SLLLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALNDGR 120
           SLL+AQ+ INVSTGCICC RGPRPPASKWRT VVCFV+SWFTF+IAFLLLLTGAALND R
Sbjct: 61  SLLVAQLTINVSTGCICCIRGPRPPASKWRTTVVCFVISWFTFIIAFLLLLTGAALNDRR 120

Query: 121 NEQSSYFDYYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDPNVWGNPSIPPPA 180
            E+S YF YY CYVLKPGVFAVAT++  AS+ LGLFYYLILNSAKN+P VWGNPS+PP A
Sbjct: 121 GEESYYFGYYECYVLKPGVFAVATILATASIVLGLFYYLILNSAKNNPTVWGNPSVPPQA 180

Query: 181 NIAMAQPQFPPPPPAQPTTADPVFVHEDTYTRRQFT 217
           NIAM QPQFPPPPP Q  + DPVFVHEDTY RRQ+T
Sbjct: 181 NIAMGQPQFPPPPPPQQRSGDPVFVHEDTYMRRQYT 216

[Close]

BLAST of CmoCh16G002540 vs. TAIR 10
Match: AT5G17210.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 203.8 bits (517), Expect = 1.4e-52
Identity = 110/219 (50.23%), Postives = 141/219 (64.38%), Query Frame = 0


Query: 1   MERKALAVCSVVAFLGLLLVATGFAAEGTRVKGNQV---VQVTPTMCKYPQSPAAALGLT 60
           MER+ + +C V+  LGLL   T F AE TR+K +QV   V  + T C YP+SPA  LG T
Sbjct: 1   MERRKIVMCGVLFLLGLLSAVTAFVAEATRIKRSQVTVTVSDSITKCTYPRSPAFNLGFT 60

Query: 61  AALSLLLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALN 120
           +AL L++AQI+++VS+GC CC +GP P  S W  +++CFVVSWFTFVIAFL+LL+GAALN
Sbjct: 61  SALFLMMAQIIVSVSSGCFCCRKGPAPSRSNWIISLICFVVSWFTFVIAFLVLLSGAALN 120

Query: 121 DGRNEQSSYFDYYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDPNVWGNPSIP 180
           D   E+S     Y+CY++KPGVF+   V+   ++ALG+ YYL L S K         +  
Sbjct: 121 DEHTEESMNAGTYFCYIVKPGVFSTGAVLSLVTIALGIVYYLCLTSNKQIVAA----TTT 180

Query: 181 PPANIAMAQPQFPPPPPAQPTTADPVFVHEDTYTRRQFT 217
               IAM QPQ P          DPVFVHEDTY RRQFT
Sbjct: 181 QGTGIAMGQPQIP------ERVEDPVFVHEDTYMRRQFT 209

[Close]

BLAST of CmoCh16G002540 vs. TAIR 10
Match: AT5G17210.2 (Protein of unknown function (DUF1218) )

HSP 1 Score: 176.4 bits (446), Expect = 2.5e-44
Identity = 91/175 (52.00%), Postives = 115/175 (65.71%), Query Frame = 0


Query: 42  TMCKYPQSPAAALGLTAALSLLLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWF 101
           T C YP+SPA  LG T+AL L++AQI+++VS+GC CC +GP P  S W  +++CFVVSWF
Sbjct: 11  TKCTYPRSPAFNLGFTSALFLMMAQIIVSVSSGCFCCRKGPAPSRSNWIISLICFVVSWF 70

Query: 102 TFVIAFLLLLTGAALNDGRNEQSSYFDYYYCYVLKPGVFAVATVVGAASLALGLFYYLIL 161
           TFVIAFL+LL+GAALND   E+S     Y+CY++KPGVF+   V+   ++ALG+ YYL L
Sbjct: 71  TFVIAFLVLLSGAALNDEHTEESMNAGTYFCYIVKPGVFSTGAVLSLVTIALGIVYYLCL 130

Query: 162 NSAKNDPNVWGNPSIPPPANIAMAQPQFPPPPPAQPTTADPVFVHEDTYTRRQFT 217
            S K         +      IAM QPQ P          DPVFVHEDTY RRQFT
Sbjct: 131 TSNKQIVAA----TTTQGTGIAMGQPQIP------ERVEDPVFVHEDTYMRRQFT 175

[Close]

BLAST of CmoCh16G002540 vs. TAIR 10
Match: AT1G13380.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 65.1 bits (157), Expect = 8.0e-11
Identity = 48/161 (29.81%), Postives = 75/161 (46.58%), Query Frame = 0


Query: 12  VAFLGLLLVATGF--AAEGTRVKGNQVVQ--VTPTMCKYPQSPAAALGLTAALSLLLAQI 71
           +  + L LVA GF  AAE  R  G  +       T C Y    A   G+ A L LL ++ 
Sbjct: 12  ILVVALSLVAFGFSIAAERRRSIGKSIQDPITNTTFCVYDSDVATGYGVGAFLFLLSSES 71

Query: 72  LINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALNDGRNEQSSYF 131
           L+   T C+C  R P  P S    +++ F+ SW TF++A   ++ GA  N    +  S  
Sbjct: 72  LLMSVTKCMCFGR-PLAPGSDRAWSIIYFISSWMTFLVAEACVIAGATKNAYHTKYLS-S 131

Query: 132 DYYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDP 169
             + C  L+ G+F    V   A++ L ++YY+    + + P
Sbjct: 132 QTFSCASLRKGIFIAGAVFIVATMVLNVYYYMYFTKSVSSP 170

[Close]

BLAST of CmoCh16G002540 vs. TAIR 10
Match: AT1G61065.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 60.8 bits (146), Expect = 1.5e-09
Identity = 41/126 (32.54%), Postives = 62/126 (49.21%), Query Frame = 0


Query: 44  CKYPQSPAAALGLTAALSLLLAQILINVSTGCICCTRGPRPPASK-WRTAVVCFVVSWFT 103
           C Y +  A  LG+ + L LL +Q+LI V++ C+CC R   P  S+ W  A+  F+ +W  
Sbjct: 43  CVYDKDIATGLGVGSFLVLLASQLLIMVASRCLCCGRALTPSGSRSW--AIFLFITTWVF 102

Query: 104 FVIAFLLLLTGAALNDGRNEQSSYFDYY--YCYVLKPGVFAVATVVGAASLALGLFYYLI 163
           F IA + LL G+  N    +   YF      C  L+ GVF         +  +   YY+ 
Sbjct: 103 FFIAQVCLLAGSVRNAYHTKYRVYFGNTSPSCRSLRKGVFGAGAAFIVLTGIVSELYYVT 162

Query: 164 LNSAKN 167
           L+ AK+
Sbjct: 163 LSRAKD 166

[Close]

BLAST of CmoCh16G002540 vs. TAIR 10
Match: AT1G68220.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 58.9 bits (141), Expect = 5.7e-09
Identity = 59/191 (30.89%), Postives = 82/191 (42.93%), Query Frame = 0


Query: 5   ALAVCSVVAFLGLLLVATGFAAEGTRVKGNQVVQV--TPTMCKYPQSPAAALGLTAALSL 64
           ++++ +VV  L LL     F AE  R     V       T+CKY    +   G++A   L
Sbjct: 4   SVSILTVVTALHLLAFVFAFGAERRRSTAVPVPDQYDEKTICKYGTEASTVYGMSAFGLL 63

Query: 65  LLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALNDGRNE 124
           L++Q ++N  T C+C  +G     S    A+V FVVSW +F+ A   LL G+A N    +
Sbjct: 64  LVSQAVVNGVTKCLCFGKGLVTGTSYTVWAIVFFVVSWVSFLGAEACLLGGSARNAYHTK 123

Query: 125 QSSYF--DYYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDPNVWGNPSIPPPA 184
               +      C VL  GVFA        SL   + YYL    +K D   W         
Sbjct: 124 SEGIYKGKELSCAVLPVGVFAAGAAFTLMSLIATILYYLA--HSKADTGGWEKHQ-NDGI 183

Query: 185 NIAMAQPQFPP 192
           NI M  P   P
Sbjct: 184 NIGMTTPSDAP 191

The following BLAST results are available for this feature:

BLAST of CmoCh16G002540 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh16G002540 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E6P1	1.4e-116	100.00	uncharacterized protein LOC111430466 OS=Cucurbita moschata OX=3662 GN=LOC1114304...	[more]
A0A6J1CG96	1.7e-93	79.63	uncharacterized protein LOC111011403 OS=Momordica charantia OX=3673 GN=LOC111011...	[more]
A0A0A0KU80	2.0e-81	72.94	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G025740 PE=4 SV=1	[more]
A0A5D3D069	3.4e-78	70.91	DUF1218 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3BX72	3.4e-78	70.91	uncharacterized protein LOC103494435 OS=Cucumis melo OX=3656 GN=LOC103494435 PE=...	[more]

BLAST of CmoCh16G002540 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022922463.1	3.0e-116	100.00	uncharacterized protein LOC111430466 [Cucurbita moschata]	[more]
KAG7014863.1	1.1e-115	99.54	hypothetical protein SDJN02_22493 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6576843.1	1.1e-115	99.54	Protein MODIFYING WALL LIGNIN-2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023551924.1	9.5e-115	99.07	uncharacterized protein LOC111809750 [Cucurbita pepo subsp. pepo]	[more]
XP_022140830.1	3.5e-93	79.63	uncharacterized protein LOC111011403 [Momordica charantia]	[more]

BLAST of CmoCh16G002540 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G17210.1	1.4e-52	50.23	Protein of unknown function (DUF1218)	[more]
AT5G17210.2	2.5e-44	52.00	Protein of unknown function (DUF1218)	[more]
AT1G13380.1	8.0e-11	29.81	Protein of unknown function (DUF1218)	[more]
AT1G61065.1	1.5e-09	32.54	Protein of unknown function (DUF1218)	[more]
AT1G68220.1	5.7e-09	30.89	Protein of unknown function (DUF1218)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009606	Modifying wall lignin-1/2	PFAM	PF06749	DUF1218	coord: 58..150 e-value: 1.6E-26 score: 92.6
None	No IPR available	PANTHER	PTHR31769:SF59	PROTEIN, PUTATIVE (DUF1218)-RELATED	coord: 1..197
None	No IPR available	PANTHER	PTHR31769	OS07G0462200 PROTEIN-RELATED	coord: 1..197

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh16G002540.1	CmoCh16G002540.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane