CmoCh16G001750 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh16G001750
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	embryo-specific protein ATS3B-like
Location	Cmo_Chr16: 792443 .. 799837 (-)
RNA-Seq Expression	CmoCh16G001750
Synteny	CmoCh16G001750

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGTGTGACGTTTTAGAGAAAATGGAGAGGTCCTCGTCGCCTCCTCTGTTGTTGCTACTGCTGCTCTCTGCCCTTGCCGTCGTCTGCTCCGCTGTCGAGCCGCCTCAGATCACCGTGAAGCCCGACGTTGCTCCCGAGTCCCTCCAGATTAACTACATCCAGGTCCGTGTTTCAACTCTCTTTACTCTCAACCGTCGCTTTTGTATTTTTCCTTCAACTTTTGCGTAATATACTTCTCTTTTTCTTTCGTGTTGCGAAGGAAGTTGGAAGCTGTTCTTACGAGGTTACAGTAGCAACAAGCTGTTCATCTCCTTCATTTATCACTGACGAAATCGGTGTGTTGTTTGGAGATTCTCATGGAAATCAGGTGTTCTTTCTTTTCTGTCATTCTCCTTTTTAAAATTATTAACTCTAGGGTTTTTACTTTTATTTACCTATTTCTGAAATTAATTCCCCTGAATCCAAACAAGAGTATGGATTTTGCTTCTAATCTTACGCCAGGATGATTCTGGCCTGAATAATAAACTTCATTATTATTATTTTTTTGTTAATCAACCACTTATCAACTCTAGGTGTTCTTTCTTTTCTGTCATTTTCCCTTTTAAAATTATTAACTCTCGGGTTTTTACTTTTATTTACCTATTTCTGAAATTAATTCCCCTGAATCCGAACAAGAGTATGGATTTTGCCTCTTATCTTACGCCAGGATGATTCTGGCCTGAATAATAAACTTCATTAATATTATTATTTTGTTAATCAAGCTCTTAATATATGATCTGATCCACGGATTTTTGTTTTGTTTTGTTTTGATTGAATGCTTCACATGTGTAACAAATAGATTGTGGAGAAGAAGCTGAGCAATGGAGACAAGGTGTTTGATAGTTGTAATACAGATAGGTTTGTTCTAAACGATCGACCCTGCAGTGTCCAAATCAGTTATATGTATATCTATAAAGACGGAGCTGACGATTGGCTTCCGAACTCTGTTGAAATCTCTGGCTCTGGAATCAAACCCGTTCTGTTCATCTTCAAATCCTCCATCCCAAGCAACACTTGGTTTGGCTTTGATTTACGCCAATATCCTTTTCTATCGCCGCCGTCCTACAACCCGTACCCTCCTTTTCCATCGTTGTCTCCTCCTCCTCCTCCTCCTCCTCCCCATCCCCTGCCACCGCCGCCGGAGCCAATTCTTTCTCCTCCGCCTCCACCTAAGCCTGTTCTTCCCCCACCGTCTCCTCCTCCTCCTCCTCCCCATCCCCTGCCACCGCCGCCGGAGCCAATTTTTTCTCCTCCGCCTCCACCTAAGCCTGTTCTTCCCCCACCGCCTCCTCCTCCTCCACCTAAGCCTGTTCTTCCCCCACCGCCTCCTCCTCCTCCTCCTCCACCATCATCCTCCAGCAAAATCTCTGGTCTGAAATTGGCTAAGGTATCTGTGGTTTTGGGATTGCTGTTTGCTCTTCTGTGATTCTGCAGTAGCTGCTTGCTTTATGTAGTAGTTTGATTTTGTAGTGGTGGGTGGGTGATGTTAATGTTCAAGTTTCATCCCCCATTCCACCATGTTGTAGTACCAATGTATGCTTTCAAAGCATTAGTGAAACTTTATCTTTTCAGCTGTATGGCTATGGGCCTGGTGCAATTCCGCAGCCACTGTTTGTTCTATGTGGGTGGCGGTTGAGAATGGTAGCTCTATGGTGGTGGGTGATACTATATTTACGTTTCACCCCCTTTTCCACCATGTTTTAAGGTCTAGACAAGCAAGTTTTACCGAACCTCTTTATGTTATCGTCTTTCAGTTGTATGGGATGCATGCCTTCTCTATGAAAGTCGGCCAAGCTATCTATGTCGAAAGTTGTATGGTGTTTTATTTGTCAATAATGTGGGATGGAGTGGATGTGTTAAATTTTGATTTTGAGTATTTTTTGTTTTTATTTCAACCATAATTATTATACATAAAATAACATTAGTTAAAACATTATTAATTTTGAGAATTATACCAAACTTAAGCTGCACGTAAAAGTACTTAATAATCTGACATTTGAACTTTGTATTTAATATGGTTTTTAATATCTTAAGTAATTAACAAAATGGGCTATTATACCATCTTAATTCGATTATTTGTCCAGATATTTCTAAAATTACACTAAAAGGTTTTTCCCTCCATGAAAATTTTATAACCAATATCAATATTTAGTGTAAAAAAACTACTTTTTAAATTTTATTTACATTTTAATTTCTTTTTTTATTTCCTTAAATATTGTCAACCTGAACAAAAGCAACATCTTCACATAAATAAGAGGATAGAAATATCTAGTGATAGTTTCGTATTTTTTAAATAGGTCACTTTCGGAGTTACAACCAAAACACACGAAGTCTAATAAGTAAATCGACGTAGTATTGTGTTAGAAAAAACCCCACCTACCCCGTCCCCATTAATATATCTCATCTCAAGTTCAAACTTTCAAATGAAGTGACTCCAAAAGGGAGAATTTCATTTCGGCTTATTCATCTTTTTAAATGTAATCCAGACTAAATATTCTTTAAAATTTTAGATTTAAAATAGATTGATGTTGATTTAAAAAGGTGTAATTTTAGTTAGCATTAGTAAGAAAAGGAAAATAGTTTGTTGGTTACAAAAGATTGGGGATCACTTGCATTTTGAGTTTGGTATAAATACTTTATTTATTTATTTGCTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTCGACTTCCCGGCAGTGAAAACCTACCTACTCCATCACCGTTTGACCATACATTTGATTGGAGCCAAGACCTGATACTGCACCTCTTCAACCAAGCTTCTTGTACTCTCGTTTCAGTGGAGCCAAACGAAGGTCTGTAAAAATGGCGATGTCTCTGCTTTCTTTCTTCATCTTTACCTTCTTCTCCATTTCTGCCGCCGTATCAACCGGTTCTCTGCCTCAACCTGCTCCAAAATCCTTAACAATCGGCTATATTCAGGTTCCGTTTATCATTTTACCTTTTACTTTCTTTACTCAATCGATGTGCTTATCTGAGGTTCTCTGTGAATCAAACTGACTCTGTTGTCTTCTTCTTTGGTACTTTCGGGTGAAGAAAGCGGGAGATTGCAACTACAGGGTCAATATAACAACAAGCTGCTCTTCGCCTTTCCATATTACTGCTGAAATCGGTGTTCTGTTTGGGGATGCGCATGGAAATCAGGTTCGTTCTTCGGGCATTTTAATTTAAATTATTTTGCAATTAGTTCATCTGCTGAACATTGTTGACTCTAGAGGAGAAAATTGAAAGCATATTGGTTAACATTTAAGCATCCAAGGCCAAACAGAAGTCTATTCCTGATTTTCATTGAATATGGCTGTTTTCCTGCTATGCTCTATATTATAGTCAAATTTTTTTATATTGGAGTTTTGAATTGCAAGAAAAAAAAAACAAATAACTAGAATTAGAAGCTTGCAATCTGTGATTCTATTGAATGGATACATAGTTGGTTTCAGTTTAACTGGAATTAGAAGCTTATAATCAGTTTTCAAATATGTTTATTATTACAGATTCGAAACCAAAAACAAGAAATTGTTTGTAGAATAAGAGGTAGTAGCACTGTTAGTTTCCCAACTTTCAAATGCTTTATTAGTTCCTCAACTTCCAAAGTTTGTCTTAGTCTCTACAGTTTACATACATTCATAAGCTTGATATTTAATCTGTTACACAGTGACTTTAAACACTTAGAAATGTGATATTCAATTGAGAGATGAACAAAACATGTGGGTATGGTAAGACTTCATTAAATAATGTTTAAAAGGATGAAGATGGCTGATTTAGAAGTTGGAAAGCAGATATATGAGCCAAAGCTGGAAGTTGAAAGTAGCAAAGCATTTGCAAAATGCAGCAAAGACATTTTTGAACTGACAGGGCCATGCACAGACCAGATATGTTTCTTTTACCTTTACAAGAATGGATCGGACGATTGGATTCCAGAGACTGTAGAAATCTCCAGCCCTGATATTGACACTGTTAAATACAAATACAACTCCTCAATCCCAGACGACACATGGTATGGCTTTGATGACTGCCAATACTTCACACCGCCACCGCCACCGCCACCATCTCCGCCAGCCCCCTCCACAGCCGGCCATCTGCGGAGGTTGAAATGGCTTGCTTTTGTGATCCCTGTGCTTCTTAGCAGCGCTGTGCTGTGAGAGTGATTCTGCATCTTGGCCATGGGCGTGGTTGTATTTTTGATCCACCGGTGTGCCTGTATTTGCTTTGTGTTTTTTGAATCTTTTGATGATCATATCAAGGTCAAAGGAATGCAGTTCATCTTTGATATGCAGAATGGGATTTGATGGAGGAATATCTGTTATGATTAGTACCTTCTTCTTTCTCGGCTTTGAGAGTAGAATATTAATTTTTGTTTAAATATTTGCTTATGCAGAGATCTACGAAACATACTAAATTTTTTTTTTTTACTATGAGAGACCCATTTGAAAGTTAAAAACATTTAAACCATTGAATTTATAACTTTCCCAAAATAAGAAAAAAAGAAAAAAAAAAAAAAGAAAAGAAAAGAAAAGAAAAATTGTGTACCTTTCAATGGTTGAAATAAATATGGGTGGCGTAGAATTTATGTCTCTGTGTTCTTCCGTATTCTTTTTCTTCTTCAAAAGCTCCGCAACGCTAAAGCCAAACACACAAACAAGGAGAAATGAAACGCGTTCTCTGTTTTCTGCTCACCTCCGCCCTCCTTTTGGCTCTCTTGGAAGCCACGGAATTGCTGCCCGAATCCGCTGAGTCCTTCAATTTAACCTATATTCAGGTATCAGCGTTCGTATCGGTTTTTTCCATTTATGCTGATTTTCAATCTCGTATCTTAGAACCATTTCGAGTTTCTCTTATTCCTTCTTGTTTGGGGATTTCTGATGTTAAAGCAACTCGGGAGTTGTTCTTATTCGGTCGTTATATCAACTAGCTGTTCTTCGCCTACGTACACAAGGGATCAGATCAGCGTTTCTTTCGGCGATGCTTATGGCAACCAGGTTTTCTTCGTTTAAATCTTCATTTTTTCCATTCATTTTATCAGAATACTAAGCCCTAGGTTTCTCGATCGTTCGCGATTTAACTAATTTCAGTTATTCGAAATGATCGATGAACGTAATCGTAGTTGAATTTTGCATCTGAGTTTGGGAATAATTTTACATTTGGCGAGGGATATAAAAACATATTAATATCGTTAGGTTAAAGTAATTGATTGATCACCTGTTGATTTATATGTTTCAGAACTTCAAATCAGATATTTATTTATTTATTTGTACTTAATATCTTAGAAAGATCCATAGTCATTAGTAAGTTGAGCAATATCTTGTAGCCTACTTAAATGTCTAGAACTTCCTAAAACATTTTTAAAGAGCGTCATGCCATGTTCGATCATTCAAAAACAATAAAAATGGTCTTTACTTTCAGATAAATTTAGGAATTTGACATGTTACAATTAATGATTGAAGAAACTTGTGCACCAGATTTATGTGCCTAGGATTGATGATCCATCCAGAAGGATATTTGAAAGATGTTCCTCTGATACATTTAGCGTAAGTGGACCTTGTGCTTACCAAATATGCTATGTCTATCTTTATCGCACTGGACCGGATGCCTGGATCCCAACAACGGTGAAAATCTCTGGTCCTAATTCTCGACCTGTCACGTTTAACTACAACACTGCCATACCGAACGACGTATGGTTCGGGTTTAACTTGTGTGGTCATGCTTCATCTTCAAACCGTATTTCAAGTTGCATATGGTTCTTATACGTTAGTTTCGTGTCTATTCTTCTGCTTTTTTTGTAATTTTATTGTATGTCAAAATGCTACTCATGTTCTTTTCTTGGTAAGAACACATTTTGATGTAGCACTCTTGTAGCATAGAGAACATGAGTATCTCACTATATAGCAGCATCAGGAGTGTTCTTCTGTATATTTAGTGATTATACACAGGCAGAGGCAATTCTTGGTGATTGAGCCTCTTGACTTGGGATAAGCTTTTGGATGTCTTGTTATGGAACTCAGAAACAGAGGATTTTTCTGGTTTTATTTACCTTTTGGATATGTTGGCCTTTGATTCATGTGTGATTCCCCTATTGTTAGCTTTATCCTATAATAATCTGTTTTATCAACCATTAAGGTGGGTAATAGCCTCAGTCTCTACTGATATATTAGAGGTTGGGGGGACGGAATTTGTTATTAAACGCGCTAATTACTATTATTATTATTATTTGAAGTTTATAAACGGTGTCTAATCATAACTCAATCCATCAAAATATTTGTAAATAAAGTAAAAAAGTTCATTTCATTTTTCTTTTGTAACAATTTTATCTTCATCCATGTATTATCCCGATATCTAATATATTTTATATACTAGTTGTATATTAATAATATATTTACTAATATTCTTTCAAAATTCATTTGAGTTATAAGGTTGATGTACCCATATTACTATATAATATATAAAGAATGTAAAAATTTATATTAGATGACCTTCAAATTTGTGCTTGAAGGAAATTTGACATAGGTTTTTATAACATTTGAATCATCAAAAAAGAAAGAAAAAAAATTCTTGGGGAGCAAGGAAATTGGTAGAAGATTCTGGACCTGAAACCGCCCCATTTGGCTTGGAATTTGGGTCTATCCGATATTAAGATGATGAGTCTGCTGATGCCCCAGTCCCGCCAAGCTGTCGATGCATCGGCTCTCCATGCCCGCCACGGTACGCATCTTAACTTCTCCATAAATCCGGATCAACCCATTTCACTTCCTGCCTTGTTGCTTCTTCCAGCTTCTTATCTCCCCCTTTTGATTCTACTTTCCCCTTCCCGAAAAATTTTATTCATATATTCATGAGTGAATTAGTTTCTGATTGATTCTCATCTATTGGATGACACATATGTTTTAATCTAGA

mRNA sequence

GTGTGTGACGTTTTAGAGAAAATGGAGAGGTCCTCGTCGCCTCCTCTGTTGTTGCTACTGCTGCTCTCTGCCCTTGCCGTCGTCTGCTCCGCTGTCGAGCCGCCTCAGATCACCGTGAAGCCCGACGTTGCTCCCGAGTCCCTCCAGATTAACTACATCCAGGAAGTTGGAAGCTGTTCTTACGAGGTTACAGTAGCAACAAGCTGTTCATCTCCTTCATTTATCACTGACGAAATCGGTGTGTTGTTTGGAGATTCTCATGGAAATCAGATTGTGGAGAAGAAGCTGAGCAATGGAGACAAGGTGTTTGATAGTTGTAATACAGATAGGTTTGTTCTAAACGATCGACCCTGCAGTGTCCAAATCAGTTATATGTATATCTATAAAGACGGAGCTGACGATTGGCTTCCGAACTCTGTTGAAATCTCTGGCTCTGGAATCAAACCCGTTCTGTTCATCTTCAAATCCTCCATCCCAAGCAACACTTGGTTTGGCTTTGATTTACGCCAATATCCTTTTCTATCGCCGCCGTCCTACAACCCGTACCCTCCTTTTCCATCGTTGTCTCCTCCTCCTCCTCCTCCTCCTCCCCATCCCCTGCCACCGCCGCCGGAGCCAATTCTTTCTCCTCCGCCTCCACCTAAGCCTGTTCTTCCCCCACCGTCTCCTCCTCCTCCTCCTCCCCATCCCCTGCCACCGCCGCCGGAGCCAATTTTTTCTCCTCCGCCTCCACCTAAGCCTGTTCTTCCCCCACCGCCTCCTCCTCCTCCACCTAAGCCTGTTCTTCCCCCACCGCCTCCTCCTCCTCCTCCTCCACCATCATCCTCCAGCAAAATCTCTGGTCTGAAATTGGCTAAGCTGTATGGCTATGGGCCTGGTGCAATTCCGCAGCCACTGTTTGTTCTATGTGGGTGGCGGTTGAGAATGGTAGCTCTATGGTGTGGAGCCAAACGAAGGTCTGTAAAAATGGCGATGTCTCTGCTTTCTTTCTTCATCTTTACCTTCTTCTCCATTTCTGCCGCCGTATCAACCGGTTCTCTGCCTCAACCTGCTCCAAAATCCTTAACAATCGGCTATATTCAGATATATGAGCCAAAGCTGGAAGTTGAAAGTAGCAAAGCATTTGCAAAATGCAGCAAAGACATTTTTGAACTGACAGGGCCATGCACAGACCAGATATGTTTCTTTTACCTTTACAAGAATGGATCGGACGATTGGATTCCAGAGACTGTAGAAATCTCCAGCCCTGATATTGACACTGTTAAATACAAATACAACTCCTCAATCCCAGACGACACATGGTATGGCTTTGATGACTGCCAATACTTCACACCGCCACCGCCACCGCCACCATCTCCGCCAGCCCCCTCCACAGCCGGCCATCTGCGGAGGTTGAAATGGCTTGCTTTTGTGATCCCTGTGCTTCTTAGCAGCGCTGTGCTCTGTTCTTCGCCTACGTACACAAGGGATCAGATCAGCGTTTCTTTCGGCGATGCTTATGGCAACCAGATTTATGTGCCTAGGATTGATGATCCATCCAGAAGGATATTTGAAAGATGTTCCTCTGATACATTTAGCGTAAGTGGACCTTGTGCTTACCAAATATGCTATGTCTATCTTTATCGCACTGGACCGGATGCCTGGATCCCAACAACGGTGAAAATCTCTGGTCCTAATTCTCGACCTGTCACGTTTAACTACAACACTGCCATACCGAACGACGTATGA

Coding sequence (CDS)

ATGGAGAGGTCCTCGTCGCCTCCTCTGTTGTTGCTACTGCTGCTCTCTGCCCTTGCCGTCGTCTGCTCCGCTGTCGAGCCGCCTCAGATCACCGTGAAGCCCGACGTTGCTCCCGAGTCCCTCCAGATTAACTACATCCAGGAAGTTGGAAGCTGTTCTTACGAGGTTACAGTAGCAACAAGCTGTTCATCTCCTTCATTTATCACTGACGAAATCGGTGTGTTGTTTGGAGATTCTCATGGAAATCAGATTGTGGAGAAGAAGCTGAGCAATGGAGACAAGGTGTTTGATAGTTGTAATACAGATAGGTTTGTTCTAAACGATCGACCCTGCAGTGTCCAAATCAGTTATATGTATATCTATAAAGACGGAGCTGACGATTGGCTTCCGAACTCTGTTGAAATCTCTGGCTCTGGAATCAAACCCGTTCTGTTCATCTTCAAATCCTCCATCCCAAGCAACACTTGGTTTGGCTTTGATTTACGCCAATATCCTTTTCTATCGCCGCCGTCCTACAACCCGTACCCTCCTTTTCCATCGTTGTCTCCTCCTCCTCCTCCTCCTCCTCCCCATCCCCTGCCACCGCCGCCGGAGCCAATTCTTTCTCCTCCGCCTCCACCTAAGCCTGTTCTTCCCCCACCGTCTCCTCCTCCTCCTCCTCCCCATCCCCTGCCACCGCCGCCGGAGCCAATTTTTTCTCCTCCGCCTCCACCTAAGCCTGTTCTTCCCCCACCGCCTCCTCCTCCTCCACCTAAGCCTGTTCTTCCCCCACCGCCTCCTCCTCCTCCTCCTCCACCATCATCCTCCAGCAAAATCTCTGGTCTGAAATTGGCTAAGCTGTATGGCTATGGGCCTGGTGCAATTCCGCAGCCACTGTTTGTTCTATGTGGGTGGCGGTTGAGAATGGTAGCTCTATGGTGTGGAGCCAAACGAAGGTCTGTAAAAATGGCGATGTCTCTGCTTTCTTTCTTCATCTTTACCTTCTTCTCCATTTCTGCCGCCGTATCAACCGGTTCTCTGCCTCAACCTGCTCCAAAATCCTTAACAATCGGCTATATTCAGATATATGAGCCAAAGCTGGAAGTTGAAAGTAGCAAAGCATTTGCAAAATGCAGCAAAGACATTTTTGAACTGACAGGGCCATGCACAGACCAGATATGTTTCTTTTACCTTTACAAGAATGGATCGGACGATTGGATTCCAGAGACTGTAGAAATCTCCAGCCCTGATATTGACACTGTTAAATACAAATACAACTCCTCAATCCCAGACGACACATGGTATGGCTTTGATGACTGCCAATACTTCACACCGCCACCGCCACCGCCACCATCTCCGCCAGCCCCCTCCACAGCCGGCCATCTGCGGAGGTTGAAATGGCTTGCTTTTGTGATCCCTGTGCTTCTTAGCAGCGCTGTGCTCTGTTCTTCGCCTACGTACACAAGGGATCAGATCAGCGTTTCTTTCGGCGATGCTTATGGCAACCAGATTTATGTGCCTAGGATTGATGATCCATCCAGAAGGATATTTGAAAGATGTTCCTCTGATACATTTAGCGTAAGTGGACCTTGTGCTTACCAAATATGCTATGTCTATCTTTATCGCACTGGACCGGATGCCTGGATCCCAACAACGGTGAAAATCTCTGGTCCTAATTCTCGACCTGTCACGTTTAACTACAACACTGCCATACCGAACGACGTATGA

Protein sequence

MERSSSPPLLLLLLLSALAVVCSAVEPPQITVKPDVAPESLQINYIQEVGSCSYEVTVATSCSSPSFITDEIGVLFGDSHGNQIVEKKLSNGDKVFDSCNTDRFVLNDRPCSVQISYMYIYKDGADDWLPNSVEISGSGIKPVLFIFKSSIPSNTWFGFDLRQYPFLSPPSYNPYPPFPSLSPPPPPPPPHPLPPPPEPILSPPPPPKPVLPPPSPPPPPPHPLPPPPEPIFSPPPPPKPVLPPPPPPPPPKPVLPPPPPPPPPPPSSSSKISGLKLAKLYGYGPGAIPQPLFVLCGWRLRMVALWCGAKRRSVKMAMSLLSFFIFTFFSISAAVSTGSLPQPAPKSLTIGYIQIYEPKLEVESSKAFAKCSKDIFELTGPCTDQICFFYLYKNGSDDWIPETVEISSPDIDTVKYKYNSSIPDDTWYGFDDCQYFTPPPPPPPSPPAPSTAGHLRRLKWLAFVIPVLLSSAVLCSSPTYTRDQISVSFGDAYGNQIYVPRIDDPSRRIFERCSSDTFSVSGPCAYQICYVYLYRTGPDAWIPTTVKISGPNSRPVTFNYNTAIPNDV

Homology

[Close]

BLAST of CmoCh16G001750 vs. ExPASy Swiss-Prot
Match: Q6NPM5 (Embryo-specific protein ATS3B OS=Arabidopsis thaliana OX=3702 GN=ATS3B PE=1 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 8.3e-36
Identity = 68/102 (66.67%), Postives = 81/102 (79.41%), Query Frame = 0


Query: 467 VLLSSAVLCSSPTYTRDQISVSFGDAYGNQIYVPRIDDPSRRIFERCSSDTFSVSGPCAY 526
           V++S++  CSS  YTRDQISV+FGD YGNQIY PR+DDPS + FE+CSSDTF ++GPC Y
Sbjct: 52  VIISTS--CSSTRYTRDQISVAFGDGYGNQIYAPRLDDPSTKTFEQCSSDTFQINGPCTY 111

Query: 527 QICYVYLYRTGPDAWIPTTVKISGPNSRPVTFNYNTAIPNDV 569
           QICYVYLYR+GPD WIP TVKI    S+ VTF YNT +P  V
Sbjct: 112 QICYVYLYRSGPDGWIPNTVKIYSHGSKAVTFPYNTYVPESV 151

[Close]

BLAST of CmoCh16G001750 vs. ExPASy Swiss-Prot
Match: Q681K2 (Embryo-specific protein ATS3A OS=Arabidopsis thaliana OX=3702 GN=ATS3A PE=1 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 6.8e-30
Identity = 57/94 (60.64%), Postives = 70/94 (74.47%), Query Frame = 0


Query: 475 CSSPTYTRDQISVSFGDAYGNQIYVPRIDDPSRRIFERCSSDTFSVSGPCAYQICYVYLY 534
           CSS +YTRD+IS+SFGD YGN++YV R+DDPS R FE+CSSDT+ +SGPC   +CY+YL 
Sbjct: 58  CSSVSYTRDKISISFGDVYGNEVYVKRLDDPSSRTFEKCSSDTYKISGPCMRDVCYLYLL 117

Query: 535 RTGPDAWIPTTVKISGPNSRPVTFNYNTAIPNDV 569
           R G D W P  VKI G + R VTF YN  +PN V
Sbjct: 118 RQGSDGWKPENVKIYGSSIRSVTFYYNLFLPNSV 151

[Close]

BLAST of CmoCh16G001750 vs. ExPASy TrEMBL
Match: A0A6J1E5F7 (embryo-specific protein ATS3B-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430882 PE=4 SV=1)

HSP 1 Score: 479.9 bits (1234), Expect = 1.4e-131
Identity = 279/280 (99.64%), Postives = 280/280 (100.00%), Query Frame = 0


Query: 1   MERSSSPPLLLLLLLSALAVVCSAVEPPQITVKPDVAPESLQINYIQEVGSCSYEVTVAT 60
           MERSSSPPLLLLLLLSALAVVCSAVEPPQITVKPDVAPESLQINYIQEVGSCSYEVTVAT
Sbjct: 1   MERSSSPPLLLLLLLSALAVVCSAVEPPQITVKPDVAPESLQINYIQEVGSCSYEVTVAT 60

Query: 61  SCSSPSFITDEIGVLFGDSHGNQIVEKKLSNGDKVFDSCNTDRFVLNDRPCSVQISYMYI 120
           SCSSPSFITDEIGVLFGDSHGNQIVEKKLSNGDKVFDSCNTDRFVLNDRPCSVQISYMYI
Sbjct: 61  SCSSPSFITDEIGVLFGDSHGNQIVEKKLSNGDKVFDSCNTDRFVLNDRPCSVQISYMYI 120

Query: 121 YKDGADDWLPNSVEISGSGIKPVLFIFKSSIPSNTWFGFDLRQYPFLSPPSYNPYPPFPS 180
           YKDGADDWLPNSVEISGSGIKPVLFIFKSSIPSNTWFGFDLRQYPFLSPPSYNPYPPFPS
Sbjct: 121 YKDGADDWLPNSVEISGSGIKPVLFIFKSSIPSNTWFGFDLRQYPFLSPPSYNPYPPFPS 180

Query: 181 LSPPPPPPPPHPLPPPPEPILSPPPPPKPVLPPPSPPPPPPHPLPPPPEPIFSPPPPPKP 240
           LSPPPPPPPPHPLPPPPEPILSPPPPPKPVLPPPSPPPPPPHPLPPPPEPIFSPPPPPKP
Sbjct: 181 LSPPPPPPPPHPLPPPPEPILSPPPPPKPVLPPPSPPPPPPHPLPPPPEPIFSPPPPPKP 240

Query: 241 VLPPPPPPPPPKPVLPPPPPPPPPPPSSSSKISGLKLAKL 281
           VLPPPPPPPPPKPVLPPPPPPPPPPPSSSSKISGLKLAK+
Sbjct: 241 VLPPPPPPPPPKPVLPPPPPPPPPPPSSSSKISGLKLAKV 280

[Close]

BLAST of CmoCh16G001750 vs. ExPASy TrEMBL
Match: A0A6J1EAT0 (embryo-specific protein ATS3B-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111430882 PE=4 SV=1)

HSP 1 Score: 454.9 bits (1169), Expect = 4.9e-124
Identity = 262/280 (93.57%), Postives = 263/280 (93.93%), Query Frame = 0


Query: 1   MERSSSPPLLLLLLLSALAVVCSAVEPPQITVKPDVAPESLQINYIQEVGSCSYEVTVAT 60
           MERSSSPPLLLLLLLSALAVVCSAVEPPQITVKPDVAPESLQINYIQEVGSCSYEVTVAT
Sbjct: 1   MERSSSPPLLLLLLLSALAVVCSAVEPPQITVKPDVAPESLQINYIQEVGSCSYEVTVAT 60

Query: 61  SCSSPSFITDEIGVLFGDSHGNQIVEKKLSNGDKVFDSCNTDRFVLNDRPCSVQISYMYI 120
           SCSSPSFITDEIGVLFGDSHGNQIVEKKLSNGDKVFDSCNTDRFVLNDRPCSVQISYMYI
Sbjct: 61  SCSSPSFITDEIGVLFGDSHGNQIVEKKLSNGDKVFDSCNTDRFVLNDRPCSVQISYMYI 120

Query: 121 YKDGADDWLPNSVEISGSGIKPVLFIFKSSIPSNTWFGFDLRQYPFLSPPSYNPYPPFPS 180
           YKDGADDWLPNSVEISGSGIKPVLFIFKSSIPSNTWFGFDLRQYPFLSPPSYNPYPPFPS
Sbjct: 121 YKDGADDWLPNSVEISGSGIKPVLFIFKSSIPSNTWFGFDLRQYPFLSPPSYNPYPPFPS 180

Query: 181 LSPPPPPPPPHPLPPPPEPILSPPPPPKPVLPPPSPPPPPPHPLPPPPEPIFSPPPPPKP 240
           LSPPPPPPPPHPLPPPPEPILSPPPPPKPVLPPPSPPPPPPHPLPPPPEPIFSPPPPPKP
Sbjct: 181 LSPPPPPPPPHPLPPPPEPILSPPPPPKPVLPPPSPPPPPPHPLPPPPEPIFSPPPPPKP 240

Query: 241 VLPPPPPPPPPKPVLPPPPPPPPPPPSSSSKISGLKLAKL 281
           VL                 PPPPPPPSSSSKISGLKLAK+
Sbjct: 241 VL-----------------PPPPPPPSSSSKISGLKLAKV 263

[Close]

BLAST of CmoCh16G001750 vs. ExPASy TrEMBL
Match: A0A6J1E5Y4 (embryo-specific protein ATS3B-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111430882 PE=4 SV=1)

HSP 1 Score: 433.7 bits (1114), Expect = 1.2e-117
Identity = 252/280 (90.00%), Postives = 253/280 (90.36%), Query Frame = 0


Query: 1   MERSSSPPLLLLLLLSALAVVCSAVEPPQITVKPDVAPESLQINYIQEVGSCSYEVTVAT 60
           MERSSSPPLLLLLLLSALAVVCSAVEPPQITVKPDVAPESLQINYIQEVGSCSYEVTVAT
Sbjct: 1   MERSSSPPLLLLLLLSALAVVCSAVEPPQITVKPDVAPESLQINYIQEVGSCSYEVTVAT 60

Query: 61  SCSSPSFITDEIGVLFGDSHGNQIVEKKLSNGDKVFDSCNTDRFVLNDRPCSVQISYMYI 120
           SCSSPSFITDEIGVLFGDSHGNQIVEKKLSNGDKVFDSCNTDRFVLNDRPCSVQISYMYI
Sbjct: 61  SCSSPSFITDEIGVLFGDSHGNQIVEKKLSNGDKVFDSCNTDRFVLNDRPCSVQISYMYI 120

Query: 121 YKDGADDWLPNSVEISGSGIKPVLFIFKSSIPSNTWFGFDLRQYPFLSPPSYNPYPPFPS 180
           YKDGADDWLPNSVEISGSGIKPVLFIFKSSIPSNTWFGFDLRQYPFLSPPSYNPYPPFPS
Sbjct: 121 YKDGADDWLPNSVEISGSGIKPVLFIFKSSIPSNTWFGFDLRQYPFLSPPSYNPYPPFPS 180

Query: 181 LSPPPPPPPPHPLPPPPEPILSPPPPPKPVLPPPSPPPPPPHPLPPPPEPIFSPPPPPKP 240
           LSPPPPPP                           PPPPPPHPLPPPPEPIFSPPPPPKP
Sbjct: 181 LSPPPPPP---------------------------PPPPPPHPLPPPPEPIFSPPPPPKP 240

Query: 241 VLPPPPPPPPPKPVLPPPPPPPPPPPSSSSKISGLKLAKL 281
           VLPPPPPPPPPKPVLPPPPPPPPPPPSSSSKISGLKLAK+
Sbjct: 241 VLPPPPPPPPPKPVLPPPPPPPPPPPSSSSKISGLKLAKV 253

[Close]

BLAST of CmoCh16G001750 vs. ExPASy TrEMBL
Match: A0A6J1E5A6 (embryo-specific protein ATS3B-like isoform X4 OS=Cucurbita moschata OX=3662 GN=LOC111430882 PE=4 SV=1)

HSP 1 Score: 408.7 bits (1049), Expect = 4.0e-110
Identity = 235/280 (83.93%), Postives = 236/280 (84.29%), Query Frame = 0


Query: 1   MERSSSPPLLLLLLLSALAVVCSAVEPPQITVKPDVAPESLQINYIQEVGSCSYEVTVAT 60
           MERSSSPPLLLLLLLSALAVVCSAVEPPQITVKPDVAPESLQINYIQEVGSCSYEVTVAT
Sbjct: 1   MERSSSPPLLLLLLLSALAVVCSAVEPPQITVKPDVAPESLQINYIQEVGSCSYEVTVAT 60

Query: 61  SCSSPSFITDEIGVLFGDSHGNQIVEKKLSNGDKVFDSCNTDRFVLNDRPCSVQISYMYI 120
           SCSSPSFITDEIGVLFGDSHGNQIVEKKLSNGDKVFDSCNTDRFVLNDRPCSVQISYMYI
Sbjct: 61  SCSSPSFITDEIGVLFGDSHGNQIVEKKLSNGDKVFDSCNTDRFVLNDRPCSVQISYMYI 120

Query: 121 YKDGADDWLPNSVEISGSGIKPVLFIFKSSIPSNTWFGFDLRQYPFLSPPSYNPYPPFPS 180
           YKDGADDWLPNSVEISGSGIKPVLFIFKSSIPSNTWFGFDLRQYPFLSPPSYNPYPPFPS
Sbjct: 121 YKDGADDWLPNSVEISGSGIKPVLFIFKSSIPSNTWFGFDLRQYPFLSPPSYNPYPPFPS 180

Query: 181 LSPPPPPPPPHPLPPPPEPILSPPPPPKPVLPPPSPPPPPPHPLPPPPEPIFSPPPPPKP 240
           LSPPPPPP                           PPPPPPHPLPPPPEPIFSPPPPPKP
Sbjct: 181 LSPPPPPP---------------------------PPPPPPHPLPPPPEPIFSPPPPPKP 236

Query: 241 VLPPPPPPPPPKPVLPPPPPPPPPPPSSSSKISGLKLAKL 281
           VL                 PPPPPPPSSSSKISGLKLAK+
Sbjct: 241 VL-----------------PPPPPPPSSSSKISGLKLAKV 236

[Close]

BLAST of CmoCh16G001750 vs. ExPASy TrEMBL
Match: A0A6J1JAH7 (embryo-specific protein ATS3B-like OS=Cucurbita maxima OX=3661 GN=LOC111482743 PE=4 SV=1)

HSP 1 Score: 382.5 bits (981), Expect = 3.1e-102
Identity = 222/280 (79.29%), Postives = 227/280 (81.07%), Query Frame = 0


Query: 1   MERSSSPPLLLLLLLSALAVVCSAVEPPQITVKPDVAPESLQINYIQEVGSCSYEVTVAT 60
           MERSSSPPLLLLLLLS+LAVVCSAVEPPQITVKPD+AP+SL INYIQEVGSCSYEVTVAT
Sbjct: 1   MERSSSPPLLLLLLLSSLAVVCSAVEPPQITVKPDIAPQSLPINYIQEVGSCSYEVTVAT 60

Query: 61  SCSSPSFITDEIGVLFGDSHGNQIVEKKLSNGDKVFDSCNTDRFVLNDRPCSVQISYMYI 120
           SCSSPSFITDEIGVLFGDSHGNQIVEKKLSNGDKVFDSCNTDRFVLNDRPCSVQISYMYI
Sbjct: 61  SCSSPSFITDEIGVLFGDSHGNQIVEKKLSNGDKVFDSCNTDRFVLNDRPCSVQISYMYI 120

Query: 121 YKDGADDWLPNSVEISGSGIKPVLFIFKSSIPSNTWFGFDLRQYPFLSPPSYNPYPPFPS 180
           YKDGADDWLPNSVEISGSGIKP+LFI KSSIP N WFGFDLRQYPF SPPSYNP PPFPS
Sbjct: 121 YKDGADDWLPNSVEISGSGIKPLLFILKSSIPRNNWFGFDLRQYPFPSPPSYNPSPPFPS 180

Query: 181 LSPPPPPPPPHPLPPPPEPILSPPPPPKPVLPPPSPPPPPPHPLPPPPEPIFSPPPPPKP 240
           LSPPPPPP                           PPPPP HPLPPPPEPI  PPPPPKP
Sbjct: 181 LSPPPPPP---------------------------PPPPPHHPLPPPPEPILPPPPPPKP 236

Query: 241 VLPPPPPPPPPKPVLPPPPPPPPPPPSSSSKISGLKLAKL 281
           VL                 PPPPPPPSSSSKISGLKLAK+
Sbjct: 241 VL-----------------PPPPPPPSSSSKISGLKLAKV 236

[Close]

BLAST of CmoCh16G001750 vs. NCBI nr
Match: KAG7014805.1 (Embryo-specific protein ATS3B [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 709.9 bits (1831), Expect = 1.7e-200
Identity = 414/553 (74.86%), Postives = 417/553 (75.41%), Query Frame = 0


Query: 1   MERSSSPPLLLLLLLSALAVVCSAVEPPQITVKPDVAPESLQINYIQEVGSCSYEVTVAT 60
           MERSSSPPL LLLLLSALAVVCSAVEPPQITVKPDVAPESL INYI              
Sbjct: 1   MERSSSPPLSLLLLLSALAVVCSAVEPPQITVKPDVAPESLPINYI-------------- 60

Query: 61  SCSSPSFITDEIGVLFGDSHGNQIVEKKLSNGDKVFDSCNTDRFVLNDRPCSVQISYMYI 120
                                 QIVEKKLSNGDKVFDSCNTDRFVLNDRPCSVQISYMYI
Sbjct: 61  ----------------------QIVEKKLSNGDKVFDSCNTDRFVLNDRPCSVQISYMYI 120

Query: 121 YKDGADDWLPNSVEISGSGIKPVLFIFKSSIPSNTWFGFDLRQYPFLSPPSYNPYPPFPS 180
           YKDGADDWLPNSVEISGSGIKP+LFIFKSSIPSNTWFGFDLRQYPFLSPPSYNPYPPFPS
Sbjct: 121 YKDGADDWLPNSVEISGSGIKPLLFIFKSSIPSNTWFGFDLRQYPFLSPPSYNPYPPFPS 180

Query: 181 LSPPPPPPPPHPLPPPPEPILSPPPPPKPVLPPPSPPPPPPHPLPPPPEPIFSPPPPPKP 240
           LSPPPPPPPPHPLPPPPEPILSPPPPPKPVLPPPSPPPPPPHPLPPPPEPIFSPPPPPKP
Sbjct: 181 LSPPPPPPPPHPLPPPPEPILSPPPPPKPVLPPPSPPPPPPHPLPPPPEPIFSPPPPPKP 240

Query: 241 VLPPPPPPPPPKPVLPPPPPPPPPPPSSSSKISGLKLAKLYGYGPGAIPQPLFVLCGWRL 300
           VL              PP PPPPPPPSSSSKISGLKLAKLYGYGPGAIPQPLFVLCGWRL
Sbjct: 241 VL--------------PPSPPPPPPPSSSSKISGLKLAKLYGYGPGAIPQPLFVLCGWRL 300

Query: 301 RMVALWC----------------------------------GAKRRSVKMAMSLLSFFIF 360
           RMVALWC                                  GAKRRS+KMAMSLLSFFIF
Sbjct: 301 RMVALWCENLPTPSPFDHIFDWSQDSDTAPLQPSFLYSRFSGAKRRSLKMAMSLLSFFIF 360

Query: 361 TFFSISAAVSTGSLPQPAPKSLTIGYI--------------------------------- 420
           TFFS SAAVSTGSLPQPAPKSLTIGYI                                 
Sbjct: 361 TFFSFSAAVSTGSLPQPAPKSLTIGYIQKAGDCNYRVNITTSCSSPFHITAEIGVLFGDA 420

Query: 421 ------------QIYEPKLEVESSKAFAKCSKDIFELTGPCTDQICFFYLYKNGSDDWIP 475
                       QIYE KLEVESSKAFAKCSKDIFELTGPCTDQICFFYLYKNGSDDWIP
Sbjct: 421 HGNQMADLEVGKQIYERKLEVESSKAFAKCSKDIFELTGPCTDQICFFYLYKNGSDDWIP 480

[Close]

BLAST of CmoCh16G001750 vs. NCBI nr
Match: XP_022923119.1 (embryo-specific protein ATS3B-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 479.9 bits (1234), Expect = 2.9e-131
Identity = 279/280 (99.64%), Postives = 280/280 (100.00%), Query Frame = 0


Query: 1   MERSSSPPLLLLLLLSALAVVCSAVEPPQITVKPDVAPESLQINYIQEVGSCSYEVTVAT 60
           MERSSSPPLLLLLLLSALAVVCSAVEPPQITVKPDVAPESLQINYIQEVGSCSYEVTVAT
Sbjct: 1   MERSSSPPLLLLLLLSALAVVCSAVEPPQITVKPDVAPESLQINYIQEVGSCSYEVTVAT 60

Query: 61  SCSSPSFITDEIGVLFGDSHGNQIVEKKLSNGDKVFDSCNTDRFVLNDRPCSVQISYMYI 120
           SCSSPSFITDEIGVLFGDSHGNQIVEKKLSNGDKVFDSCNTDRFVLNDRPCSVQISYMYI
Sbjct: 61  SCSSPSFITDEIGVLFGDSHGNQIVEKKLSNGDKVFDSCNTDRFVLNDRPCSVQISYMYI 120

Query: 121 YKDGADDWLPNSVEISGSGIKPVLFIFKSSIPSNTWFGFDLRQYPFLSPPSYNPYPPFPS 180
           YKDGADDWLPNSVEISGSGIKPVLFIFKSSIPSNTWFGFDLRQYPFLSPPSYNPYPPFPS
Sbjct: 121 YKDGADDWLPNSVEISGSGIKPVLFIFKSSIPSNTWFGFDLRQYPFLSPPSYNPYPPFPS 180

Query: 181 LSPPPPPPPPHPLPPPPEPILSPPPPPKPVLPPPSPPPPPPHPLPPPPEPIFSPPPPPKP 240
           LSPPPPPPPPHPLPPPPEPILSPPPPPKPVLPPPSPPPPPPHPLPPPPEPIFSPPPPPKP
Sbjct: 181 LSPPPPPPPPHPLPPPPEPILSPPPPPKPVLPPPSPPPPPPHPLPPPPEPIFSPPPPPKP 240

Query: 241 VLPPPPPPPPPKPVLPPPPPPPPPPPSSSSKISGLKLAKL 281
           VLPPPPPPPPPKPVLPPPPPPPPPPPSSSSKISGLKLAK+
Sbjct: 241 VLPPPPPPPPPKPVLPPPPPPPPPPPSSSSKISGLKLAKV 280

[Close]

BLAST of CmoCh16G001750 vs. NCBI nr
Match: XP_022923120.1 (embryo-specific protein ATS3B-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 454.9 bits (1169), Expect = 1.0e-123
Identity = 262/280 (93.57%), Postives = 263/280 (93.93%), Query Frame = 0


Query: 1   MERSSSPPLLLLLLLSALAVVCSAVEPPQITVKPDVAPESLQINYIQEVGSCSYEVTVAT 60
           MERSSSPPLLLLLLLSALAVVCSAVEPPQITVKPDVAPESLQINYIQEVGSCSYEVTVAT
Sbjct: 1   MERSSSPPLLLLLLLSALAVVCSAVEPPQITVKPDVAPESLQINYIQEVGSCSYEVTVAT 60

Query: 61  SCSSPSFITDEIGVLFGDSHGNQIVEKKLSNGDKVFDSCNTDRFVLNDRPCSVQISYMYI 120
           SCSSPSFITDEIGVLFGDSHGNQIVEKKLSNGDKVFDSCNTDRFVLNDRPCSVQISYMYI
Sbjct: 61  SCSSPSFITDEIGVLFGDSHGNQIVEKKLSNGDKVFDSCNTDRFVLNDRPCSVQISYMYI 120

Query: 121 YKDGADDWLPNSVEISGSGIKPVLFIFKSSIPSNTWFGFDLRQYPFLSPPSYNPYPPFPS 180
           YKDGADDWLPNSVEISGSGIKPVLFIFKSSIPSNTWFGFDLRQYPFLSPPSYNPYPPFPS
Sbjct: 121 YKDGADDWLPNSVEISGSGIKPVLFIFKSSIPSNTWFGFDLRQYPFLSPPSYNPYPPFPS 180

Query: 181 LSPPPPPPPPHPLPPPPEPILSPPPPPKPVLPPPSPPPPPPHPLPPPPEPIFSPPPPPKP 240
           LSPPPPPPPPHPLPPPPEPILSPPPPPKPVLPPPSPPPPPPHPLPPPPEPIFSPPPPPKP
Sbjct: 181 LSPPPPPPPPHPLPPPPEPILSPPPPPKPVLPPPSPPPPPPHPLPPPPEPIFSPPPPPKP 240

Query: 241 VLPPPPPPPPPKPVLPPPPPPPPPPPSSSSKISGLKLAKL 281
           VL                 PPPPPPPSSSSKISGLKLAK+
Sbjct: 241 VL-----------------PPPPPPPSSSSKISGLKLAKV 263

[Close]

BLAST of CmoCh16G001750 vs. NCBI nr
Match: KAG6576767.1 (Embryo-specific protein ATS3B, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 450.3 bits (1157), Expect = 2.5e-122
Identity = 261/280 (93.21%), Postives = 263/280 (93.93%), Query Frame = 0


Query: 1   MERSSSPPLLLLLLLSALAVVCSAVEPPQITVKPDVAPESLQINYIQEVGSCSYEVTVAT 60
           MERSSSPPL LLLLLSALAVVCSAVEPPQITVKPDVAPESL INYIQEVGSCSYEVTVAT
Sbjct: 1   MERSSSPPLSLLLLLSALAVVCSAVEPPQITVKPDVAPESLPINYIQEVGSCSYEVTVAT 60

Query: 61  SCSSPSFITDEIGVLFGDSHGNQIVEKKLSNGDKVFDSCNTDRFVLNDRPCSVQISYMYI 120
           SCSSPSFITDEIGVLFGDSHGNQIVEKKLSNGDKVFDSCNTDRFVLNDRPCSVQISYMYI
Sbjct: 61  SCSSPSFITDEIGVLFGDSHGNQIVEKKLSNGDKVFDSCNTDRFVLNDRPCSVQISYMYI 120

Query: 121 YKDGADDWLPNSVEISGSGIKPVLFIFKSSIPSNTWFGFDLRQYPFLSPPSYNPYPPFPS 180
           YKDGADDWLPNSVEISGSGIKP+LFIFKSSIPSNTWFGFDLRQYPFLSPPSYNPYPPFPS
Sbjct: 121 YKDGADDWLPNSVEISGSGIKPLLFIFKSSIPSNTWFGFDLRQYPFLSPPSYNPYPPFPS 180

Query: 181 LSPPPPPPPPHPLPPPPEPILSPPPPPKPVLPPPSPPPPPPHPLPPPPEPIFSPPPPPKP 240
           LSPPPPPPPPHPLPPPPEPILSPPPPPKPVLPPPSPPPPPPHPLPPPPEPIFSPPPPPKP
Sbjct: 181 LSPPPPPPPPHPLPPPPEPILSPPPPPKPVLPPPSPPPPPPHPLPPPPEPIFSPPPPPKP 240

Query: 241 VLPPPPPPPPPKPVLPPPPPPPPPPPSSSSKISGLKLAKL 281
           VL              PP PPPPPPPSSSSKISGLKLAK+
Sbjct: 241 VL--------------PPSPPPPPPPSSSSKISGLKLAKV 266

[Close]

BLAST of CmoCh16G001750 vs. NCBI nr
Match: XP_023551787.1 (embryo-specific protein ATS3B-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 434.9 bits (1117), Expect = 1.1e-117
Identity = 254/280 (90.71%), Postives = 259/280 (92.50%), Query Frame = 0


Query: 1   MERSSSPPLLLLLLLSALAVVCSAVEPPQITVKPDVAPESLQINYIQEVGSCSYEVTVAT 60
           MERSSSPPLLLLLLLS+LAVV SAV+PPQITVKPDVAPESL INYIQEVGSCSYEVTVAT
Sbjct: 1   MERSSSPPLLLLLLLSSLAVVYSAVDPPQITVKPDVAPESLPINYIQEVGSCSYEVTVAT 60

Query: 61  SCSSPSFITDEIGVLFGDSHGNQIVEKKLSNGDKVFDSCNTDRFVLNDRPCSVQISYMYI 120
           SCSSPSFITDEIGVLFGDSHGNQIVEKKLSNGDKVFDSCNTDRFVLNDRPCSVQI+YMYI
Sbjct: 61  SCSSPSFITDEIGVLFGDSHGNQIVEKKLSNGDKVFDSCNTDRFVLNDRPCSVQINYMYI 120

Query: 121 YKDGADDWLPNSVEISGSGIKPVLFIFKSSIPSNTWFGFDLRQYPFLSPPSYNPYPPFPS 180
           YKDGADDWLPNSVEISGSGIKP+LFIFKSSIP NTWFGFDLRQYPF SPPSYNPYPPFPS
Sbjct: 121 YKDGADDWLPNSVEISGSGIKPLLFIFKSSIPRNTWFGFDLRQYPFPSPPSYNPYPPFPS 180

Query: 181 LSPPPPPPPPHPLPPPPEPILSPPPPPKPVLPPPSPPPPPPHPLPPPPEPIFSPPPPPKP 240
           LS PPPPPPPHPLPPPPEPILSPPPPPKPVLPPPSPPPPPPHPLPPPPEPIFSPPPPPKP
Sbjct: 181 LS-PPPPPPPHPLPPPPEPILSPPPPPKPVLPPPSPPPPPPHPLPPPPEPIFSPPPPPKP 240

Query: 241 VLPPPPPPPPPKPVLPPPPPPPPPPPSSSSKISGLKLAKL 281
           VL                PPPPPPPPSSSSKISGLKLAK+
Sbjct: 241 VL----------------PPPPPPPPSSSSKISGLKLAKV 263

[Close]

BLAST of CmoCh16G001750 vs. TAIR 10
Match: AT5G62200.1 (Embryo-specific protein 3, (ATS3) )

HSP 1 Score: 153.3 bits (386), Expect = 5.9e-37
Identity = 68/102 (66.67%), Postives = 81/102 (79.41%), Query Frame = 0


Query: 467 VLLSSAVLCSSPTYTRDQISVSFGDAYGNQIYVPRIDDPSRRIFERCSSDTFSVSGPCAY 526
           V++S++  CSS  YTRDQISV+FGD YGNQIY PR+DDPS + FE+CSSDTF ++GPC Y
Sbjct: 52  VIISTS--CSSTRYTRDQISVAFGDGYGNQIYAPRLDDPSTKTFEQCSSDTFQINGPCTY 111

Query: 527 QICYVYLYRTGPDAWIPTTVKISGPNSRPVTFNYNTAIPNDV 569
           QICYVYLYR+GPD WIP TVKI    S+ VTF YNT +P  V
Sbjct: 112 QICYVYLYRSGPDGWIPNTVKIYSHGSKAVTFPYNTYVPESV 151

[Close]

BLAST of CmoCh16G001750 vs. TAIR 10
Match: AT2G41475.1 (Embryo-specific protein 3, (ATS3) )

HSP 1 Score: 133.7 bits (335), Expect = 4.8e-31
Identity = 57/94 (60.64%), Postives = 70/94 (74.47%), Query Frame = 0


Query: 475 CSSPTYTRDQISVSFGDAYGNQIYVPRIDDPSRRIFERCSSDTFSVSGPCAYQICYVYLY 534
           CSS +YTRD+IS+SFGD YGN++YV R+DDPS R FE+CSSDT+ +SGPC   +CY+YL 
Sbjct: 58  CSSVSYTRDKISISFGDVYGNEVYVKRLDDPSSRTFEKCSSDTYKISGPCMRDVCYLYLL 117

Query: 535 RTGPDAWIPTTVKISGPNSRPVTFNYNTAIPNDV 569
           R G D W P  VKI G + R VTF YN  +PN V
Sbjct: 118 RQGSDGWKPENVKIYGSSIRSVTFYYNLFLPNSV 151

[Close]

BLAST of CmoCh16G001750 vs. TAIR 10
Match: AT5G62210.1 (Embryo-specific protein 3, (ATS3) )

HSP 1 Score: 90.5 bits (223), Expect = 4.7e-18
Identity = 81/212 (38.21%), Postives = 108/212 (50.94%), Query Frame = 0


Query: 1   MERSSSPPLLLLLLLSALAVVCSAVEPPQITVKPDVAPESLQINYIQEVGSCSYEVTVAT 60
           ME S S  LLLL       V+C     P +T +P ++   L      E  SC Y V V T
Sbjct: 1   MECSLSSILLLL-------VLCFTHPIPSLTFEPLISSLDL-----HEEESCPYTVIVTT 60

Query: 61  SCSSPSFITDEIGVLFGDSHGNQIVEKKLS---NGDKVFDSCNTDRFVLNDRPCSVQISY 120
           SC SP +  D++ +  GD+  NQ+V  +L    +G   F+ C++D F +  + C   I  
Sbjct: 61  SCFSPDWSRDQVTIALGDADDNQVVAPRLDKPLSGGGGFEKCSSDTFQVKGK-CLNTICS 120

Query: 121 MYIYKDGADDWLPNSVEISGSGIKPVLFIFKSSIPSNTWFGFDLRQYPFLSPPSYNPYPP 180
           +YIY+ G D W+P +VEI   G K V F F  ++P N W+G +      L PPS    P 
Sbjct: 121 VYIYRSGTDGWIPETVEIYKEGSKSVKFDFNKNVPENIWYGNNYCNNTDLPPPS----PD 180

Query: 181 FPSLSPPPPPPPPHPLPPPPEPILSPPPPPKP 210
           FP  SP  PPP P   PP P P + PPPPP P
Sbjct: 181 FPPFSPSIPPPSPPYFPPEP-PSIPPPPPPSP 194

The following BLAST results are available for this feature:

BLAST of CmoCh16G001750 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6NPM5	8.3e-36	66.67	Embryo-specific protein ATS3B OS=Arabidopsis thaliana OX=3702 GN=ATS3B PE=1 SV=1	[more]
Q681K2	6.8e-30	60.64	Embryo-specific protein ATS3A OS=Arabidopsis thaliana OX=3702 GN=ATS3A PE=1 SV=1	[more]

BLAST of CmoCh16G001750 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E5F7	1.4e-131	99.64	embryo-specific protein ATS3B-like isoform X1 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1EAT0	4.9e-124	93.57	embryo-specific protein ATS3B-like isoform X2 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1E5Y4	1.2e-117	90.00	embryo-specific protein ATS3B-like isoform X3 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1E5A6	4.0e-110	83.93	embryo-specific protein ATS3B-like isoform X4 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1JAH7	3.1e-102	79.29	embryo-specific protein ATS3B-like OS=Cucurbita maxima OX=3661 GN=LOC111482743 P...	[more]

BLAST of CmoCh16G001750 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7014805.1	1.7e-200	74.86	Embryo-specific protein ATS3B [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022923119.1	2.9e-131	99.64	embryo-specific protein ATS3B-like isoform X1 [Cucurbita moschata]	[more]
XP_022923120.1	1.0e-123	93.57	embryo-specific protein ATS3B-like isoform X2 [Cucurbita moschata]	[more]
KAG6576767.1	2.5e-122	93.21	Embryo-specific protein ATS3B, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023551787.1	1.1e-117	90.71	embryo-specific protein ATS3B-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmoCh16G001750 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G62200.1	5.9e-37	66.67	Embryo-specific protein 3, (ATS3)	[more]
AT2G41475.1	4.8e-31	60.64	Embryo-specific protein 3, (ATS3)	[more]
AT5G62210.1	4.7e-18	38.21	Embryo-specific protein 3, (ATS3)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR01217	PRICHEXTENSN	coord: 163..179 score: 38.82 coord: 26..38 score: 36.92 coord: 182..199 score: 46.67 coord: 205..230 score: 46.15
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 178..269
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 178..271
None	No IPR available	PANTHER	PTHR31718	FAMILY NOT NAMED	coord: 354..469 coord: 475..567 coord: 11..165
None	No IPR available	PANTHER	PTHR31718:SF32	EMBRYO-SPECIFIC PROTEIN ATS3B	coord: 354..469 coord: 475..567 coord: 11..165
None	No IPR available	CDD	cd00113	PLAT	coord: 475..568 e-value: 2.74831E-16 score: 73.142
IPR010417	Embryo-specific ATS3	PFAM	PF06232	ATS3	coord: 354..433 e-value: 2.7E-24 score: 85.4 coord: 48..160 e-value: 4.4E-31 score: 107.4 coord: 474..568 e-value: 2.2E-36 score: 124.5
IPR036392	PLAT/LH2 domain superfamily	SUPERFAMILY	49723	Lipase/lipooxygenase domain (PLAT/LH2 domain)	coord: 477..567
IPR036392	PLAT/LH2 domain superfamily	SUPERFAMILY	49723	Lipase/lipooxygenase domain (PLAT/LH2 domain)	coord: 355..430
IPR036392	PLAT/LH2 domain superfamily	SUPERFAMILY	49723	Lipase/lipooxygenase domain (PLAT/LH2 domain)	coord: 49..158

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh16G001750.1	CmoCh16G001750.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0005515	protein binding