CmoCh16G001580 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh16G001580
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	dehydration-responsive element-binding protein 1A-like
Location	Cmo_Chr16: 718294 .. 718929 (+)
RNA-Seq Expression	CmoCh16G001580
Synteny	CmoCh16G001580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAATCTTTTTCAACTTTTTATGAAGACTACTTCTCCAGCTCCGAGAGTAGTACTTGCCGGCGGACCATATTTTCCGAGAAGGAGCTTATGTTAGCGGCGAGCAATCCCAAGAAGAGGGCCGGCAGGAAGAAGTTTAAGGAGACAAGGCACCCTGTTTACAGAGGGGTCAGGAGGAGGAACTCCGGCAAGTGGGTCTGTGAAGTGAGAGAGCCTAATAAGAAGTCAAGGATTTGGCTTGGCACTTTTCCGACGGCGGAGATGGCGGCTCGGGCTCACGACGTCGCTGCCATGAAGCTTCGAGGTCGCTCTGCTTGTCTCAATTTTGCAGATTCTGCGTGGCGGCTGCCGGAGCCAGCATCTGCTGACGCCAGGGATATTCAGAAGGCGGCGGCGGAGGCGGCGGAGGCATTCCGGCCGGCCGAATCAGATGGGTCTTCTGTTGATGACTCAAGGACGGAAAATATGATGACGGCGGAGACGACGCCAGAAAACGTGTTGTACGTGGATGATGATGCAATTTTTGGGCTGCCGGGATTGTTGGAGGATATGGCTGCAGGGATGATGTTGCCTCCACCTCAGCATTTTCGTGATGACATGGATTTTTATTCTGACGTGTCATTATGGAGCTACTAA

mRNA sequence

ATGGAATCTTTTTCAACTTTTTATGAAGACTACTTCTCCAGCTCCGAGAGTAGTACTTGCCGGCGGACCATATTTTCCGAGAAGGAGCTTATGTTAGCGGCGAGCAATCCCAAGAAGAGGGCCGGCAGGAAGAAGTTTAAGGAGACAAGGCACCCTGTTTACAGAGGGGTCAGGAGGAGGAACTCCGGCAAGTGGGTCTGTGAAGTGAGAGAGCCTAATAAGAAGTCAAGGATTTGGCTTGGCACTTTTCCGACGGCGGAGATGGCGGCTCGGGCTCACGACGTCGCTGCCATGAAGCTTCGAGGTCGCTCTGCTTGTCTCAATTTTGCAGATTCTGCGTGGCGGCTGCCGGAGCCAGCATCTGCTGACGCCAGGGATATTCAGAAGGCGGCGGCGGAGGCGGCGGAGGCATTCCGGCCGGCCGAATCAGATGGGTCTTCTGTTGATGACTCAAGGACGGAAAATATGATGACGGCGGAGACGACGCCAGAAAACGTGTTGTACGTGGATGATGATGCAATTTTTGGGCTGCCGGGATTGTTGGAGGATATGGCTGCAGGGATGATGTTGCCTCCACCTCAGCATTTTCGTGATGACATGGATTTTTATTCTGACGTGTCATTATGGAGCTACTAA

Coding sequence (CDS)

ATGGAATCTTTTTCAACTTTTTATGAAGACTACTTCTCCAGCTCCGAGAGTAGTACTTGCCGGCGGACCATATTTTCCGAGAAGGAGCTTATGTTAGCGGCGAGCAATCCCAAGAAGAGGGCCGGCAGGAAGAAGTTTAAGGAGACAAGGCACCCTGTTTACAGAGGGGTCAGGAGGAGGAACTCCGGCAAGTGGGTCTGTGAAGTGAGAGAGCCTAATAAGAAGTCAAGGATTTGGCTTGGCACTTTTCCGACGGCGGAGATGGCGGCTCGGGCTCACGACGTCGCTGCCATGAAGCTTCGAGGTCGCTCTGCTTGTCTCAATTTTGCAGATTCTGCGTGGCGGCTGCCGGAGCCAGCATCTGCTGACGCCAGGGATATTCAGAAGGCGGCGGCGGAGGCGGCGGAGGCATTCCGGCCGGCCGAATCAGATGGGTCTTCTGTTGATGACTCAAGGACGGAAAATATGATGACGGCGGAGACGACGCCAGAAAACGTGTTGTACGTGGATGATGATGCAATTTTTGGGCTGCCGGGATTGTTGGAGGATATGGCTGCAGGGATGATGTTGCCTCCACCTCAGCATTTTCGTGATGACATGGATTTTTATTCTGACGTGTCATTATGGAGCTACTAA

Protein sequence

MESFSTFYEDYFSSSESSTCRRTIFSEKELMLAASNPKKRAGRKKFKETRHPVYRGVRRRNSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAAMKLRGRSACLNFADSAWRLPEPASADARDIQKAAAEAAEAFRPAESDGSSVDDSRTENMMTAETTPENVLYVDDDAIFGLPGLLEDMAAGMMLPPPQHFRDDMDFYSDVSLWSY

Homology

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BLAST of CmoCh16G001580 vs. ExPASy Swiss-Prot
Match: Q9M0L0 (Dehydration-responsive element-binding protein 1A OS=Arabidopsis thaliana OX=3702 GN=DREB1A PE=1 SV=2)

HSP 1 Score: 221.9 bits (564), Expect = 7.0e-57
Identity = 133/222 (59.91%), Postives = 154/222 (69.37%), Query Frame = 0


Query: 1   MESFSTFYEDYFSSSESSTCRRTIFSEKELMLAASNPKKRAGRKKFKETRHPVYRGVRRR 60
           M SFS F E + S  ESS      +      LA+S PKK AGRKKF+ETRHP+YRGVRRR
Sbjct: 1   MNSFSAFSEMFGSDYESSVSSGGDYIP---TLASSCPKKPAGRKKFRETRHPIYRGVRRR 60

Query: 61  NSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAAMKLRGRSACLNFADSAWRLPEPA 120
           NSGKWVCEVREPNKK+RIWLGTF TAEMAARAHDVAA+ LRGRSACLNFADSAWRL  P 
Sbjct: 61  NSGKWVCEVREPNKKTRIWLGTFQTAEMAARAHDVAALALRGRSACLNFADSAWRLRIPE 120

Query: 121 SADARDIQKAAAEAAEAFRPAESD-----GSSVDDSRTENMMTAETTPENVLYVDDDAIF 180
           S  A+DIQKAAAEAA AF+    D     G  ++++  E + TAE + EN  Y+ D+A+F
Sbjct: 121 STCAKDIQKAAAEAALAFQDEMCDATTDHGFDMEETLVEAIYTAEQS-ENAFYMHDEAMF 180

Query: 181 GLPGLLEDMAAGMMLPPP------QHFRDDMDFYSDVSLWSY 212
            +P LL +MA GM+LP P       H  D  D   DVSLWSY
Sbjct: 181 EMPSLLANMAEGMLLPLPSVQWNHNHEVDGDD--DDVSLWSY 216

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BLAST of CmoCh16G001580 vs. ExPASy Swiss-Prot
Match: Q9FJ93 (Dehydration-responsive element-binding protein 1D OS=Arabidopsis thaliana OX=3702 GN=DREB1D PE=2 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 4.6e-56
Identity = 125/223 (56.05%), Postives = 152/223 (68.16%), Query Frame = 0


Query: 1   MESFSTFYEDYFSSSESSTCRRTIFSEKELMLAASNPKKRAGRKKFKETRHPVYRGVRRR 60
           M  F + + D F S        +  SE    LA+S PKKRAGRKKF+ETRHP+YRGVR+R
Sbjct: 1   MNPFYSTFPDSFLSISDHRSPVSDSSECSPKLASSCPKKRAGRKKFRETRHPIYRGVRQR 60

Query: 61  NSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAAMKLRGRSACLNFADSAWRLPEPA 120
           NSGKWVCEVREPNKKSRIWLGTFPT EMAARAHDVAA+ LRGRSACLNFADSAWRL  P 
Sbjct: 61  NSGKWVCEVREPNKKSRIWLGTFPTVEMAARAHDVAALALRGRSACLNFADSAWRLRIPE 120

Query: 121 SADARDIQKAAAEAAEAFR----------PAESDGSSVDDSRTENMMTAETTPENVLYVD 180
           +   ++IQKAA+EAA AF+           AE++ ++ +  R E    AE     V Y+D
Sbjct: 121 TTCPKEIQKAASEAAMAFQNETTTEGSKTAAEAEEAAGEGVR-EGERRAEEQNGGVFYMD 180

Query: 181 DDAIFGLPGLLEDMAAGMMLPPPQ--HFRDDMDFYSDVSLWSY 212
           D+A+ G+P   E+MA GM+LPPP+     +D D   DVSLWS+
Sbjct: 181 DEALLGMPNFFENMAEGMLLPPPEVGWNHNDFDGVGDVSLWSF 222

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BLAST of CmoCh16G001580 vs. ExPASy Swiss-Prot
Match: Q9SYS6 (Dehydration-responsive element-binding protein 1C OS=Arabidopsis thaliana OX=3702 GN=DREB1C PE=1 SV=2)

HSP 1 Score: 216.1 bits (549), Expect = 3.9e-55
Identity = 123/220 (55.91%), Postives = 156/220 (70.91%), Query Frame = 0


Query: 1   MESFSTFYEDYFSSSESSTCRRTIFSEKELMLAASNPKKRAGRKKFKETRHPVYRGVRRR 60
           M SFS F E + S  ES       +S K   LA S PKK AGRKKF+ETRHP+YRGVR+R
Sbjct: 1   MNSFSAFSEMFGSDYESPVSSGGDYSPK---LATSCPKKPAGRKKFRETRHPIYRGVRQR 60

Query: 61  NSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAAMKLRGRSACLNFADSAWRLPEPA 120
           NSGKWVCE+REPNKK+RIWLGTF TAEMAARAHDVAA+ LRGRSACLNFADSAWRL  P 
Sbjct: 61  NSGKWVCELREPNKKTRIWLGTFQTAEMAARAHDVAAIALRGRSACLNFADSAWRLRIPE 120

Query: 121 SADARDIQKAAAEAAEAFR------PAESDGSSVDDSRTENMMTAETTPENVLYVDDDAI 180
           S  A++IQKAAAEAA  F+        ++ G  ++++  E + T E + ++  Y+D++A+
Sbjct: 121 STCAKEIQKAAAEAALNFQDEMCHMTTDAHGLDMEETLVEAIYTPEQS-QDAFYMDEEAM 180

Query: 181 FGLPGLLEDMAAGMMLPPPQ---HFRDDMDFYSDVSLWSY 212
            G+  LL++MA GM+LP P    ++  D++   DVSLWSY
Sbjct: 181 LGMSSLLDNMAEGMLLPSPSVQWNYNFDVEGDDDVSLWSY 216

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BLAST of CmoCh16G001580 vs. ExPASy Swiss-Prot
Match: P93835 (Dehydration-responsive element-binding protein 1B OS=Arabidopsis thaliana OX=3702 GN=DREB1B PE=1 SV=2)

HSP 1 Score: 214.9 bits (546), Expect = 8.6e-55
Identity = 126/220 (57.27%), Postives = 151/220 (68.64%), Query Frame = 0


Query: 1   MESFSTFYEDYFSSSESSTCRRTIFSEKELMLAASNPKKRAGRKKFKETRHPVYRGVRRR 60
           M SFS F E + S  E          +    LA S PKK AGRKKF+ETRHP+YRGVR+R
Sbjct: 1   MNSFSAFSEMFGSDYEPQG------GDYCPTLATSCPKKPAGRKKFRETRHPIYRGVRQR 60

Query: 61  NSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAAMKLRGRSACLNFADSAWRLPEPA 120
           NSGKWV EVREPNKK+RIWLGTF TAEMAARAHDVAA+ LRGRSACLNFADSAWRL  P 
Sbjct: 61  NSGKWVSEVREPNKKTRIWLGTFQTAEMAARAHDVAALALRGRSACLNFADSAWRLRIPE 120

Query: 121 SADARDIQKAAAEAAEAFRPAESD------GSSVDDSRTENMMTAETTPENVLYVDDDAI 180
           S  A+DIQKAAAEAA AF+    D      G  ++++  E + T E + E   Y+D++ +
Sbjct: 121 STCAKDIQKAAAEAALAFQDETCDTTTTNHGLDMEETMVEAIYTPEQS-EGAFYMDEETM 180

Query: 181 FGLPGLLEDMAAGMMLPPPQ---HFRDDMDFYSDVSLWSY 212
           FG+P LL++MA GM+LPPP    +   D +   DVSLWSY
Sbjct: 181 FGMPTLLDNMAEGMLLPPPSVQWNHNYDGEGDGDVSLWSY 213

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BLAST of CmoCh16G001580 vs. ExPASy Swiss-Prot
Match: Q9SGJ6 (Dehydration-responsive element-binding protein 1E OS=Arabidopsis thaliana OX=3702 GN=DREB1E PE=2 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 1.2e-43
Identity = 100/192 (52.08%), Postives = 128/192 (66.67%), Query Frame = 0


Query: 29  ELMLAASNPKKRAGRKKFKETRHPVYRGVRRRNSGKWVCEVREPNKKSRIWLGTFPTAEM 88
           ++ +A   PKKRAGR+ FKETRHP+YRGVRRR+  KWVCEVREP  + R+WLGT+PTA+M
Sbjct: 5   DITVAEMKPKKRAGRRIFKETRHPIYRGVRRRDGDKWVCEVREPIHQRRVWLGTYPTADM 64

Query: 89  AARAHDVAAMKLRGRSACLNFADSAWRLPEPASADARDIQKAAAEAAEAFRPAE-SDGSS 148
           AARAHDVA + LRGRSACLNF+DSAWRLP PAS D   I++ AAEAAE FRP E S G +
Sbjct: 65  AARAHDVAVLALRGRSACLNFSDSAWRLPVPASTDPDTIRRTAAEAAEMFRPPEFSTGIT 124

Query: 149 VDDSRTENMMTAETTPENVLYVDDDAIFGLPGLLEDMAAGMMLPPPQH--------FRDD 208
           V  S +E     +T+ E           G+ G++  +A   ++ PP+         + D+
Sbjct: 125 VLPSASE----FDTSDE-----------GVAGMMMRLAEEPLMSPPRSYIDMNTSVYVDE 181

Query: 209 MDFYSDVSLWSY 212
              Y D+SLWSY
Sbjct: 185 EMCYEDLSLWSY 181

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BLAST of CmoCh16G001580 vs. ExPASy TrEMBL
Match: A0A6J1EAB5 (dehydration-responsive element-binding protein 1A-like OS=Cucurbita moschata OX=3662 GN=LOC111430798 PE=4 SV=1)

HSP 1 Score: 419.1 bits (1076), Expect = 1.1e-113
Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0


Query: 1   MESFSTFYEDYFSSSESSTCRRTIFSEKELMLAASNPKKRAGRKKFKETRHPVYRGVRRR 60
           MESFSTFYEDYFSSSESSTCRRTIFSEKELMLAASNPKKRAGRKKFKETRHPVYRGVRRR
Sbjct: 1   MESFSTFYEDYFSSSESSTCRRTIFSEKELMLAASNPKKRAGRKKFKETRHPVYRGVRRR 60

Query: 61  NSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAAMKLRGRSACLNFADSAWRLPEPA 120
           NSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAAMKLRGRSACLNFADSAWRLPEPA
Sbjct: 61  NSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAAMKLRGRSACLNFADSAWRLPEPA 120

Query: 121 SADARDIQKAAAEAAEAFRPAESDGSSVDDSRTENMMTAETTPENVLYVDDDAIFGLPGL 180
           SADARDIQKAAAEAAEAFRPAESDGSSVDDSRTENMMTAETTPENVLYVDDDAIFGLPGL
Sbjct: 121 SADARDIQKAAAEAAEAFRPAESDGSSVDDSRTENMMTAETTPENVLYVDDDAIFGLPGL 180

Query: 181 LEDMAAGMMLPPPQHFRDDMDFYSDVSLWSY 212
           LEDMAAGMMLPPPQHFRDDMDFYSDVSLWSY
Sbjct: 181 LEDMAAGMMLPPPQHFRDDMDFYSDVSLWSY 211

[Close]

BLAST of CmoCh16G001580 vs. ExPASy TrEMBL
Match: A0A6J1J9I5 (dehydration-responsive element-binding protein 1A-like OS=Cucurbita maxima OX=3661 GN=LOC111482959 PE=4 SV=1)

HSP 1 Score: 411.8 bits (1057), Expect = 1.8e-111
Identity = 208/211 (98.58%), Postives = 208/211 (98.58%), Query Frame = 0


Query: 1   MESFSTFYEDYFSSSESSTCRRTIFSEKELMLAASNPKKRAGRKKFKETRHPVYRGVRRR 60
           MESFST YEDYFSSSESS CRR IFSEKELMLAASNPKKRAGRKKFKETRHPVYRGVRRR
Sbjct: 1   MESFSTLYEDYFSSSESSDCRRFIFSEKELMLAASNPKKRAGRKKFKETRHPVYRGVRRR 60

Query: 61  NSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAAMKLRGRSACLNFADSAWRLPEPA 120
           NSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAAMKLRGRSACLNFADSAWRLPEPA
Sbjct: 61  NSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAAMKLRGRSACLNFADSAWRLPEPA 120

Query: 121 SADARDIQKAAAEAAEAFRPAESDGSSVDDSRTENMMTAETTPENVLYVDDDAIFGLPGL 180
           SADARDIQKAAAEAAEAFRPAESDGSSVDDSRTENMMTAETTPENVLYVDDDAIFGLPGL
Sbjct: 121 SADARDIQKAAAEAAEAFRPAESDGSSVDDSRTENMMTAETTPENVLYVDDDAIFGLPGL 180

Query: 181 LEDMAAGMMLPPPQHFRDDMDFYSDVSLWSY 212
           LEDMAAGMMLPPPQHFRDDMDFYSDVSLWSY
Sbjct: 181 LEDMAAGMMLPPPQHFRDDMDFYSDVSLWSY 211

[Close]

BLAST of CmoCh16G001580 vs. ExPASy TrEMBL
Match: A0A5D3DFF6 (Dehydration-responsive element-binding protein 1A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold440G00300 PE=4 SV=1)

HSP 1 Score: 377.5 bits (968), Expect = 3.7e-101
Identity = 189/212 (89.15%), Postives = 201/212 (94.81%), Query Frame = 0


Query: 1   MESFSTFYEDYFSSSESSTCRRTIFSEKELMLAASNPKKRAGRKKFKETRHPVYRGVRRR 60
           M+SFS FYE+YFSSSESS CRR IFS+++ MLAASNPKKRAGRKKFKETRHPVYRGVRRR
Sbjct: 1   MDSFSNFYEEYFSSSESSNCRRPIFSDEDFMLAASNPKKRAGRKKFKETRHPVYRGVRRR 60

Query: 61  NSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAAMKLRGRSACLNFADSAWRLPEPA 120
           NSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAA+ LRG +ACLNFADSAWRLP PA
Sbjct: 61  NSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAAIALRGLTACLNFADSAWRLPVPA 120

Query: 121 SADARDIQKAAAEAAEAFRPAESDGSSVDDSRTENMMTAE-TTPENVLYVDDDAIFGLPG 180
           SADARDIQKAAAEAAEAFRPAESDGSSVDDSRTEN M AE TTPENV Y+D++A+FG+PG
Sbjct: 121 SADARDIQKAAAEAAEAFRPAESDGSSVDDSRTENGMMAETTTPENVFYMDEEAVFGMPG 180

Query: 181 LLEDMAAGMMLPPPQHFRDDMDFYSDVSLWSY 212
           LLEDMAAGMMLPPPQHFRDDMDFYSDVSLWSY
Sbjct: 181 LLEDMAAGMMLPPPQHFRDDMDFYSDVSLWSY 212

[Close]

BLAST of CmoCh16G001580 vs. ExPASy TrEMBL
Match: A0A140DCV6 (CRT/DRE-binding factor 1 OS=Cucumis melo OX=3656 GN=LOC103484041 PE=2 SV=1)

HSP 1 Score: 375.9 bits (964), Expect = 1.1e-100
Identity = 188/212 (88.68%), Postives = 200/212 (94.34%), Query Frame = 0


Query: 1   MESFSTFYEDYFSSSESSTCRRTIFSEKELMLAASNPKKRAGRKKFKETRHPVYRGVRRR 60
           M+SFS FYE+YFSSSESS CRR IFS+++ MLAASNPKKRAGRKKFKETRHPVYRGVRRR
Sbjct: 1   MDSFSNFYEEYFSSSESSNCRRPIFSDEDFMLAASNPKKRAGRKKFKETRHPVYRGVRRR 60

Query: 61  NSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAAMKLRGRSACLNFADSAWRLPEPA 120
           NSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAA+ LRG +ACLNFADSAWRLP PA
Sbjct: 61  NSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAAIALRGLTACLNFADSAWRLPVPA 120

Query: 121 SADARDIQKAAAEAAEAFRPAESDGSSVDDSRTENMMTAE-TTPENVLYVDDDAIFGLPG 180
           S DARDIQKAAAEAAEAFRPAESDGSSVDDSRTEN M AE TTPENV Y+D++A+FG+PG
Sbjct: 121 STDARDIQKAAAEAAEAFRPAESDGSSVDDSRTENGMMAETTTPENVFYMDEEAVFGMPG 180

Query: 181 LLEDMAAGMMLPPPQHFRDDMDFYSDVSLWSY 212
           LLEDMAAGMMLPPPQHFRDDMDFYSDVSLWSY
Sbjct: 181 LLEDMAAGMMLPPPQHFRDDMDFYSDVSLWSY 212

[Close]

BLAST of CmoCh16G001580 vs. ExPASy TrEMBL
Match: A0A5A7SWS3 (Dehydration-responsive element-binding protein 1A OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold239G00440 PE=4 SV=1)

HSP 1 Score: 375.9 bits (964), Expect = 1.1e-100
Identity = 188/212 (88.68%), Postives = 200/212 (94.34%), Query Frame = 0


Query: 1   MESFSTFYEDYFSSSESSTCRRTIFSEKELMLAASNPKKRAGRKKFKETRHPVYRGVRRR 60
           M+SFS FYE+YFSSSESS CRR IFS+++ MLAASNPKKRAGRKKFKETRHPVYRGVRRR
Sbjct: 1   MDSFSNFYEEYFSSSESSNCRRPIFSDEDFMLAASNPKKRAGRKKFKETRHPVYRGVRRR 60

Query: 61  NSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAAMKLRGRSACLNFADSAWRLPEPA 120
           NSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAA+ LRG +ACLNFADSAWRLP PA
Sbjct: 61  NSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAAIALRGLTACLNFADSAWRLPVPA 120

Query: 121 SADARDIQKAAAEAAEAFRPAESDGSSVDDSRTENMMTAE-TTPENVLYVDDDAIFGLPG 180
           S DARDIQKAAAEAAEAFRPAESDGSSVDDSRTEN M AE TTPENV Y+D++A+FG+PG
Sbjct: 121 STDARDIQKAAAEAAEAFRPAESDGSSVDDSRTENGMMAETTTPENVFYMDEEAVFGMPG 180

Query: 181 LLEDMAAGMMLPPPQHFRDDMDFYSDVSLWSY 212
           LLEDMAAGMMLPPPQHFRDDMDFYSDVSLWSY
Sbjct: 181 LLEDMAAGMMLPPPQHFRDDMDFYSDVSLWSY 212

[Close]

BLAST of CmoCh16G001580 vs. NCBI nr
Match: XP_022922975.1 (dehydration-responsive element-binding protein 1A-like [Cucurbita moschata] >KAG7014791.1 Dehydration-responsive element-binding protein 1D, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 419.1 bits (1076), Expect = 2.3e-113
Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0


Query: 1   MESFSTFYEDYFSSSESSTCRRTIFSEKELMLAASNPKKRAGRKKFKETRHPVYRGVRRR 60
           MESFSTFYEDYFSSSESSTCRRTIFSEKELMLAASNPKKRAGRKKFKETRHPVYRGVRRR
Sbjct: 1   MESFSTFYEDYFSSSESSTCRRTIFSEKELMLAASNPKKRAGRKKFKETRHPVYRGVRRR 60

Query: 61  NSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAAMKLRGRSACLNFADSAWRLPEPA 120
           NSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAAMKLRGRSACLNFADSAWRLPEPA
Sbjct: 61  NSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAAMKLRGRSACLNFADSAWRLPEPA 120

Query: 121 SADARDIQKAAAEAAEAFRPAESDGSSVDDSRTENMMTAETTPENVLYVDDDAIFGLPGL 180
           SADARDIQKAAAEAAEAFRPAESDGSSVDDSRTENMMTAETTPENVLYVDDDAIFGLPGL
Sbjct: 121 SADARDIQKAAAEAAEAFRPAESDGSSVDDSRTENMMTAETTPENVLYVDDDAIFGLPGL 180

Query: 181 LEDMAAGMMLPPPQHFRDDMDFYSDVSLWSY 212
           LEDMAAGMMLPPPQHFRDDMDFYSDVSLWSY
Sbjct: 181 LEDMAAGMMLPPPQHFRDDMDFYSDVSLWSY 211

[Close]

BLAST of CmoCh16G001580 vs. NCBI nr
Match: KAG6576749.1 (Dehydration-responsive element-binding protein 1D, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 417.2 bits (1071), Expect = 8.7e-113
Identity = 210/211 (99.53%), Postives = 210/211 (99.53%), Query Frame = 0


Query: 1   MESFSTFYEDYFSSSESSTCRRTIFSEKELMLAASNPKKRAGRKKFKETRHPVYRGVRRR 60
           MESFSTFYEDYFSSSESSTCRR IFSEKELMLAASNPKKRAGRKKFKETRHPVYRGVRRR
Sbjct: 1   MESFSTFYEDYFSSSESSTCRRAIFSEKELMLAASNPKKRAGRKKFKETRHPVYRGVRRR 60

Query: 61  NSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAAMKLRGRSACLNFADSAWRLPEPA 120
           NSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAAMKLRGRSACLNFADSAWRLPEPA
Sbjct: 61  NSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAAMKLRGRSACLNFADSAWRLPEPA 120

Query: 121 SADARDIQKAAAEAAEAFRPAESDGSSVDDSRTENMMTAETTPENVLYVDDDAIFGLPGL 180
           SADARDIQKAAAEAAEAFRPAESDGSSVDDSRTENMMTAETTPENVLYVDDDAIFGLPGL
Sbjct: 121 SADARDIQKAAAEAAEAFRPAESDGSSVDDSRTENMMTAETTPENVLYVDDDAIFGLPGL 180

Query: 181 LEDMAAGMMLPPPQHFRDDMDFYSDVSLWSY 212
           LEDMAAGMMLPPPQHFRDDMDFYSDVSLWSY
Sbjct: 181 LEDMAAGMMLPPPQHFRDDMDFYSDVSLWSY 211

[Close]

BLAST of CmoCh16G001580 vs. NCBI nr
Match: XP_023522016.1 (dehydration-responsive element-binding protein 1A-like [Cucurbita pepo subsp. pepo] >XP_023553052.1 dehydration-responsive element-binding protein 1A-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 416.4 bits (1069), Expect = 1.5e-112
Identity = 209/211 (99.05%), Postives = 211/211 (100.00%), Query Frame = 0


Query: 1   MESFSTFYEDYFSSSESSTCRRTIFSEKELMLAASNPKKRAGRKKFKETRHPVYRGVRRR 60
           MESFSTFYEDYFSSSESSTCRR+IFS+KELMLAASNPKKRAGRKKFKETRHPVYRGVRRR
Sbjct: 1   MESFSTFYEDYFSSSESSTCRRSIFSDKELMLAASNPKKRAGRKKFKETRHPVYRGVRRR 60

Query: 61  NSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAAMKLRGRSACLNFADSAWRLPEPA 120
           NSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAAMKLRGRSACLNFADSAWRLPEPA
Sbjct: 61  NSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAAMKLRGRSACLNFADSAWRLPEPA 120

Query: 121 SADARDIQKAAAEAAEAFRPAESDGSSVDDSRTENMMTAETTPENVLYVDDDAIFGLPGL 180
           SADARDIQKAAAEAAEAFRPAESDGSSVDDSRTENMMTAETTPENVLYVDDDAIFGLPGL
Sbjct: 121 SADARDIQKAAAEAAEAFRPAESDGSSVDDSRTENMMTAETTPENVLYVDDDAIFGLPGL 180

Query: 181 LEDMAAGMMLPPPQHFRDDMDFYSDVSLWSY 212
           LEDMAAGMMLPPPQHFRDDMDFYSDVSLWSY
Sbjct: 181 LEDMAAGMMLPPPQHFRDDMDFYSDVSLWSY 211

[Close]

BLAST of CmoCh16G001580 vs. NCBI nr
Match: XP_022984775.1 (dehydration-responsive element-binding protein 1A-like [Cucurbita maxima])

HSP 1 Score: 411.8 bits (1057), Expect = 3.7e-111
Identity = 208/211 (98.58%), Postives = 208/211 (98.58%), Query Frame = 0


Query: 1   MESFSTFYEDYFSSSESSTCRRTIFSEKELMLAASNPKKRAGRKKFKETRHPVYRGVRRR 60
           MESFST YEDYFSSSESS CRR IFSEKELMLAASNPKKRAGRKKFKETRHPVYRGVRRR
Sbjct: 1   MESFSTLYEDYFSSSESSDCRRFIFSEKELMLAASNPKKRAGRKKFKETRHPVYRGVRRR 60

Query: 61  NSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAAMKLRGRSACLNFADSAWRLPEPA 120
           NSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAAMKLRGRSACLNFADSAWRLPEPA
Sbjct: 61  NSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAAMKLRGRSACLNFADSAWRLPEPA 120

Query: 121 SADARDIQKAAAEAAEAFRPAESDGSSVDDSRTENMMTAETTPENVLYVDDDAIFGLPGL 180
           SADARDIQKAAAEAAEAFRPAESDGSSVDDSRTENMMTAETTPENVLYVDDDAIFGLPGL
Sbjct: 121 SADARDIQKAAAEAAEAFRPAESDGSSVDDSRTENMMTAETTPENVLYVDDDAIFGLPGL 180

Query: 181 LEDMAAGMMLPPPQHFRDDMDFYSDVSLWSY 212
           LEDMAAGMMLPPPQHFRDDMDFYSDVSLWSY
Sbjct: 181 LEDMAAGMMLPPPQHFRDDMDFYSDVSLWSY 211

[Close]

BLAST of CmoCh16G001580 vs. NCBI nr
Match: XP_038900545.1 (dehydration-responsive element-binding protein 1A-like [Benincasa hispida])

HSP 1 Score: 379.4 bits (973), Expect = 2.0e-101
Identity = 187/211 (88.63%), Postives = 199/211 (94.31%), Query Frame = 0


Query: 1   MESFSTFYEDYFSSSESSTCRRTIFSEKELMLAASNPKKRAGRKKFKETRHPVYRGVRRR 60
           M+SFSTFYEDYFSSSESS CRR  + ++E+MLA SNPKKRAGRKKFKETRHPVYRGVRRR
Sbjct: 1   MDSFSTFYEDYFSSSESSNCRRPFYLDEEIMLAESNPKKRAGRKKFKETRHPVYRGVRRR 60

Query: 61  NSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAAMKLRGRSACLNFADSAWRLPEPA 120
           NSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAA+ LRG +ACLNFADSAWRLP PA
Sbjct: 61  NSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAALALRGLTACLNFADSAWRLPVPA 120

Query: 121 SADARDIQKAAAEAAEAFRPAESDGSSVDDSRTENMMTAETTPENVLYVDDDAIFGLPGL 180
           SADARDIQKAAAEAAEAFRP ESD SSVDDSRTEN MTAETTPENV Y+D++A+FG+PGL
Sbjct: 121 SADARDIQKAAAEAAEAFRPVESDRSSVDDSRTENWMTAETTPENVFYMDEEAVFGMPGL 180

Query: 181 LEDMAAGMMLPPPQHFRDDMDFYSDVSLWSY 212
           LEDMAAGMMLPPPQHFRDDMDFYSDVSLWSY
Sbjct: 181 LEDMAAGMMLPPPQHFRDDMDFYSDVSLWSY 211

[Close]

BLAST of CmoCh16G001580 vs. TAIR 10
Match: AT4G25480.1 (dehydration response element B1A )

HSP 1 Score: 221.9 bits (564), Expect = 5.0e-58
Identity = 133/222 (59.91%), Postives = 154/222 (69.37%), Query Frame = 0


Query: 1   MESFSTFYEDYFSSSESSTCRRTIFSEKELMLAASNPKKRAGRKKFKETRHPVYRGVRRR 60
           M SFS F E + S  ESS      +      LA+S PKK AGRKKF+ETRHP+YRGVRRR
Sbjct: 1   MNSFSAFSEMFGSDYESSVSSGGDYIP---TLASSCPKKPAGRKKFRETRHPIYRGVRRR 60

Query: 61  NSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAAMKLRGRSACLNFADSAWRLPEPA 120
           NSGKWVCEVREPNKK+RIWLGTF TAEMAARAHDVAA+ LRGRSACLNFADSAWRL  P 
Sbjct: 61  NSGKWVCEVREPNKKTRIWLGTFQTAEMAARAHDVAALALRGRSACLNFADSAWRLRIPE 120

Query: 121 SADARDIQKAAAEAAEAFRPAESD-----GSSVDDSRTENMMTAETTPENVLYVDDDAIF 180
           S  A+DIQKAAAEAA AF+    D     G  ++++  E + TAE + EN  Y+ D+A+F
Sbjct: 121 STCAKDIQKAAAEAALAFQDEMCDATTDHGFDMEETLVEAIYTAEQS-ENAFYMHDEAMF 180

Query: 181 GLPGLLEDMAAGMMLPPP------QHFRDDMDFYSDVSLWSY 212
            +P LL +MA GM+LP P       H  D  D   DVSLWSY
Sbjct: 181 EMPSLLANMAEGMLLPLPSVQWNHNHEVDGDD--DDVSLWSY 216

[Close]

BLAST of CmoCh16G001580 vs. TAIR 10
Match: AT5G51990.1 (C-repeat-binding factor 4 )

HSP 1 Score: 219.2 bits (557), Expect = 3.2e-57
Identity = 125/223 (56.05%), Postives = 152/223 (68.16%), Query Frame = 0


Query: 1   MESFSTFYEDYFSSSESSTCRRTIFSEKELMLAASNPKKRAGRKKFKETRHPVYRGVRRR 60
           M  F + + D F S        +  SE    LA+S PKKRAGRKKF+ETRHP+YRGVR+R
Sbjct: 1   MNPFYSTFPDSFLSISDHRSPVSDSSECSPKLASSCPKKRAGRKKFRETRHPIYRGVRQR 60

Query: 61  NSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAAMKLRGRSACLNFADSAWRLPEPA 120
           NSGKWVCEVREPNKKSRIWLGTFPT EMAARAHDVAA+ LRGRSACLNFADSAWRL  P 
Sbjct: 61  NSGKWVCEVREPNKKSRIWLGTFPTVEMAARAHDVAALALRGRSACLNFADSAWRLRIPE 120

Query: 121 SADARDIQKAAAEAAEAFR----------PAESDGSSVDDSRTENMMTAETTPENVLYVD 180
           +   ++IQKAA+EAA AF+           AE++ ++ +  R E    AE     V Y+D
Sbjct: 121 TTCPKEIQKAASEAAMAFQNETTTEGSKTAAEAEEAAGEGVR-EGERRAEEQNGGVFYMD 180

Query: 181 DDAIFGLPGLLEDMAAGMMLPPPQ--HFRDDMDFYSDVSLWSY 212
           D+A+ G+P   E+MA GM+LPPP+     +D D   DVSLWS+
Sbjct: 181 DEALLGMPNFFENMAEGMLLPPPEVGWNHNDFDGVGDVSLWSF 222

[Close]

BLAST of CmoCh16G001580 vs. TAIR 10
Match: AT4G25470.1 (C-repeat/DRE binding factor 2 )

HSP 1 Score: 216.1 bits (549), Expect = 2.7e-56
Identity = 123/220 (55.91%), Postives = 156/220 (70.91%), Query Frame = 0


Query: 1   MESFSTFYEDYFSSSESSTCRRTIFSEKELMLAASNPKKRAGRKKFKETRHPVYRGVRRR 60
           M SFS F E + S  ES       +S K   LA S PKK AGRKKF+ETRHP+YRGVR+R
Sbjct: 1   MNSFSAFSEMFGSDYESPVSSGGDYSPK---LATSCPKKPAGRKKFRETRHPIYRGVRQR 60

Query: 61  NSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAAMKLRGRSACLNFADSAWRLPEPA 120
           NSGKWVCE+REPNKK+RIWLGTF TAEMAARAHDVAA+ LRGRSACLNFADSAWRL  P 
Sbjct: 61  NSGKWVCELREPNKKTRIWLGTFQTAEMAARAHDVAAIALRGRSACLNFADSAWRLRIPE 120

Query: 121 SADARDIQKAAAEAAEAFR------PAESDGSSVDDSRTENMMTAETTPENVLYVDDDAI 180
           S  A++IQKAAAEAA  F+        ++ G  ++++  E + T E + ++  Y+D++A+
Sbjct: 121 STCAKEIQKAAAEAALNFQDEMCHMTTDAHGLDMEETLVEAIYTPEQS-QDAFYMDEEAM 180

Query: 181 FGLPGLLEDMAAGMMLPPPQ---HFRDDMDFYSDVSLWSY 212
            G+  LL++MA GM+LP P    ++  D++   DVSLWSY
Sbjct: 181 LGMSSLLDNMAEGMLLPSPSVQWNYNFDVEGDDDVSLWSY 216

[Close]

BLAST of CmoCh16G001580 vs. TAIR 10
Match: AT4G25490.1 (C-repeat/DRE binding factor 1 )

HSP 1 Score: 214.9 bits (546), Expect = 6.1e-56
Identity = 126/220 (57.27%), Postives = 151/220 (68.64%), Query Frame = 0


Query: 1   MESFSTFYEDYFSSSESSTCRRTIFSEKELMLAASNPKKRAGRKKFKETRHPVYRGVRRR 60
           M SFS F E + S  E          +    LA S PKK AGRKKF+ETRHP+YRGVR+R
Sbjct: 1   MNSFSAFSEMFGSDYEPQG------GDYCPTLATSCPKKPAGRKKFRETRHPIYRGVRQR 60

Query: 61  NSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAAMKLRGRSACLNFADSAWRLPEPA 120
           NSGKWV EVREPNKK+RIWLGTF TAEMAARAHDVAA+ LRGRSACLNFADSAWRL  P 
Sbjct: 61  NSGKWVSEVREPNKKTRIWLGTFQTAEMAARAHDVAALALRGRSACLNFADSAWRLRIPE 120

Query: 121 SADARDIQKAAAEAAEAFRPAESD------GSSVDDSRTENMMTAETTPENVLYVDDDAI 180
           S  A+DIQKAAAEAA AF+    D      G  ++++  E + T E + E   Y+D++ +
Sbjct: 121 STCAKDIQKAAAEAALAFQDETCDTTTTNHGLDMEETMVEAIYTPEQS-EGAFYMDEETM 180

Query: 181 FGLPGLLEDMAAGMMLPPPQ---HFRDDMDFYSDVSLWSY 212
           FG+P LL++MA GM+LPPP    +   D +   DVSLWSY
Sbjct: 181 FGMPTLLDNMAEGMLLPPPSVQWNHNYDGEGDGDVSLWSY 213

[Close]

BLAST of CmoCh16G001580 vs. TAIR 10
Match: AT1G63030.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 177.9 bits (450), Expect = 8.3e-45
Identity = 100/192 (52.08%), Postives = 128/192 (66.67%), Query Frame = 0


Query: 29  ELMLAASNPKKRAGRKKFKETRHPVYRGVRRRNSGKWVCEVREPNKKSRIWLGTFPTAEM 88
           ++ +A   PKKRAGR+ FKETRHP+YRGVRRR+  KWVCEVREP  + R+WLGT+PTA+M
Sbjct: 5   DITVAEMKPKKRAGRRIFKETRHPIYRGVRRRDGDKWVCEVREPIHQRRVWLGTYPTADM 64

Query: 89  AARAHDVAAMKLRGRSACLNFADSAWRLPEPASADARDIQKAAAEAAEAFRPAE-SDGSS 148
           AARAHDVA + LRGRSACLNF+DSAWRLP PAS D   I++ AAEAAE FRP E S G +
Sbjct: 65  AARAHDVAVLALRGRSACLNFSDSAWRLPVPASTDPDTIRRTAAEAAEMFRPPEFSTGIT 124

Query: 149 VDDSRTENMMTAETTPENVLYVDDDAIFGLPGLLEDMAAGMMLPPPQH--------FRDD 208
           V  S +E     +T+ E           G+ G++  +A   ++ PP+         + D+
Sbjct: 125 VLPSASE----FDTSDE-----------GVAGMMMRLAEEPLMSPPRSYIDMNTSVYVDE 181

Query: 209 MDFYSDVSLWSY 212
              Y D+SLWSY
Sbjct: 185 EMCYEDLSLWSY 181

The following BLAST results are available for this feature:

BLAST of CmoCh16G001580 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M0L0	7.0e-57	59.91	Dehydration-responsive element-binding protein 1A OS=Arabidopsis thaliana OX=370...	[more]
Q9FJ93	4.6e-56	56.05	Dehydration-responsive element-binding protein 1D OS=Arabidopsis thaliana OX=370...	[more]
Q9SYS6	3.9e-55	55.91	Dehydration-responsive element-binding protein 1C OS=Arabidopsis thaliana OX=370...	[more]
P93835	8.6e-55	57.27	Dehydration-responsive element-binding protein 1B OS=Arabidopsis thaliana OX=370...	[more]
Q9SGJ6	1.2e-43	52.08	Dehydration-responsive element-binding protein 1E OS=Arabidopsis thaliana OX=370...	[more]

BLAST of CmoCh16G001580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EAB5	1.1e-113	100.00	dehydration-responsive element-binding protein 1A-like OS=Cucurbita moschata OX=...	[more]
A0A6J1J9I5	1.8e-111	98.58	dehydration-responsive element-binding protein 1A-like OS=Cucurbita maxima OX=36...	[more]
A0A5D3DFF6	3.7e-101	89.15	Dehydration-responsive element-binding protein 1A OS=Cucumis melo var. makuwa OX...	[more]
A0A140DCV6	1.1e-100	88.68	CRT/DRE-binding factor 1 OS=Cucumis melo OX=3656 GN=LOC103484041 PE=2 SV=1	[more]
A0A5A7SWS3	1.1e-100	88.68	Dehydration-responsive element-binding protein 1A OS=Cucumis melo var. makuwa OX...	[more]

BLAST of CmoCh16G001580 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022922975.1	2.3e-113	100.00	dehydration-responsive element-binding protein 1A-like [Cucurbita moschata] >KAG...	[more]
KAG6576749.1	8.7e-113	99.53	Dehydration-responsive element-binding protein 1D, partial [Cucurbita argyrosper...	[more]
XP_023522016.1	1.5e-112	99.05	dehydration-responsive element-binding protein 1A-like [Cucurbita pepo subsp. pe...	[more]
XP_022984775.1	3.7e-111	98.58	dehydration-responsive element-binding protein 1A-like [Cucurbita maxima]	[more]
XP_038900545.1	2.0e-101	88.63	dehydration-responsive element-binding protein 1A-like [Benincasa hispida]	[more]

BLAST of CmoCh16G001580 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25480.1	5.0e-58	59.91	dehydration response element B1A	[more]
AT5G51990.1	3.2e-57	56.05	C-repeat-binding factor 4	[more]
AT4G25470.1	2.7e-56	55.91	C-repeat/DRE binding factor 2	[more]
AT4G25490.1	6.1e-56	57.27	C-repeat/DRE binding factor 1	[more]
AT1G63030.1	8.3e-45	52.08	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 54..65 score: 66.06 coord: 76..92 score: 70.05
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 53..116 e-value: 3.2E-31 score: 119.7
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 52..102 e-value: 5.2E-16 score: 58.6
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 53..110 score: 23.077003
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 54..112 e-value: 5.84066E-32 score: 108.898
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 53..111 e-value: 2.6E-24 score: 87.1
None	No IPR available	PANTHER	PTHR31839	DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D	coord: 13..211
None	No IPR available	PANTHER	PTHR31839:SF53	AP2/ERF DOMAIN-CONTAINING TRANSCRIPTION FACTOR	coord: 13..211
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 53..112

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh16G001580.1	CmoCh16G001580.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity