Homology
BLAST of CmoCh16G001350 vs. ExPASy Swiss-Prot
Match:
O65607 (DNA mismatch repair protein MSH3 OS=Arabidopsis thaliana OX=3702 GN=MSH3 PE=1 SV=2)
HSP 1 Score: 1105.9 bits (2859), Expect = 0.0e+00
Identity = 619/1115 (55.52%), Postives = 768/1115 (68.88%), Query Frame = 0
Query: 368 MGKQKQQVISRFFAPKPKSPSVSSSSSSALAPPTQSFSPPKISATVTFSPSKR-LISSAL 427
MGKQKQQ ISRFFAPKPKSP+ + + + P PPKISATV+FSPSKR L+S L
Sbjct: 1 MGKQKQQTISRFFAPKPKSPTHEPNPVAESSTP-----PPKISATVSFSPSKRKLLSDHL 60
Query: 428 ASQLTPPKSSKRPKLSPHTHNPLPSVSNPSLHKRFLEKFLEPIENSFESSNQNPKAPTGG 487
A+ S K+PKLSPHT NP+P +P+LH+RFL++FLEP S + T
Sbjct: 61 AA-----ASPKKPKLSPHTQNPVP---DPNLHQRFLQRFLEP-------SPEEYVPETSS 120
Query: 488 DAKYTPLELQVVDLKKRYPDVLLMVEVGYRYRFFGQDAEIAARVLGIYAHLDRNFMTASI 547
KYTPLE QVV+LK +YPDV+LMVEVGYRYRFFG+DAEIAARVLGIYAH+D NFMTAS+
Sbjct: 121 SRKYTPLEQQVVELKSKYPDVVLMVEVGYRYRFFGEDAEIAARVLGIYAHMDHNFMTASV 180
Query: 548 PTFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATLEAIQNL 607
PTFRLN HVRRLV+AGYK+GVVKQTETAAIK+HG+N+ GPF RGLSALYTKATLEA +++
Sbjct: 181 PTFRLNFHVRRLVNAGYKIGVVKQTETAAIKSHGANRTGPFFRGLSALYTKATLEAAEDI 240
Query: 608 G---GAEEGCGGESNYLFCVVEKSMLVDNLDRRIEYGVDVKIGMVAMEISTGDVIYREYD 667
G EEG G +SN+L CVV++ + + L IE DV++G+V +EISTG+V+Y E++
Sbjct: 241 SGGCGGEEGFGSQSNFLVCVVDERVKSETLGCGIEMSFDVRVGVVGVEISTGEVVYEEFN 300
Query: 668 DNFMRSGLEAMLLSLSPAELLLGDPISKATEKVFDRVGSLSFTVALNAVACCTDCVVCYA 727
DNFMRSGLEA++LSLSPAELLLG P+S+ TEK +V +A
Sbjct: 301 DNFMRSGLEAVILSLSPAELLLGQPLSQQTEKF----------------------LVAHA 360
Query: 728 GPASNVRVEHVSRDCFKDGSALAEVMSLYENIDKDNLAADHH------------------ 787
GP SNVRVE S DCF +G+A+ EV+SL E I NL D
Sbjct: 361 GPTSNVRVERASLDCFSNGNAVDEVISLCEKISAGNLEDDKEMKLEAAEKGMSCLTVHTI 420
Query: 788 ------------------------------------DPDTVLAERKSDRIAIKVLKNNDD 847
+T + + ++V+KNN D
Sbjct: 421 MNMPHLTVQALALTFCHLKQFGFERILYQGASFRSLSSNTEMTLSANTLQQLEVVKNNSD 480
Query: 848 GSETGSLLQCMNHTLTIFGSRLLRQWITHPLCERDMIIARQEAVSEIAAAMVSSKVTQNI 907
GSE+GSL MNHTLT++GSRLLR W+THPLC+R++I AR +AVSEI+A M S +Q
Sbjct: 481 GSESGSLFHNMNHTLTVYGSRLLRHWVTHPLCDRNLISARLDAVSEISACMGSHSSSQLS 540
Query: 908 RESDEEDSDVMVIEPELNYILSSVLTTLGRAPDIQRGITRIFHRTAAPSEFIAVIQAILY 967
E EE S+ ++ PE +LSSVLT + R+ DIQRGITRIFHRTA +EFIAV++AIL
Sbjct: 541 SELVEEGSERAIVSPEFYLVLSSVLTAMSRSSDIQRGITRIFHRTAKATEFIAVMEAILL 600
Query: 968 AGKQLQQFHIDEEDDNYSSES-MIGSKLLRKLILSASSSGLISIAAKLLSTISKEAADQG 1027
AGKQ+Q+ I ++ + S +S + S LLRKLI SS ++ A KLLS ++KEAA +G
Sbjct: 601 AGKQIQRLGIKQDSEMRSMQSATVRSTLLRKLISVISSPVVVDNAGKLLSALNKEAAVRG 660
Query: 1028 DLPNLMIINNDQFPKVARARKEAQSAREKLDSLITVYRKQLGMRKLEFISVSGTTHLIEL 1087
DL +++I ++DQFP++A AR+ REKLDS I +RK+L +R LEF+ VSG THLIEL
Sbjct: 661 DLLDILITSSDQFPELAEARQAVLVIREKLDSSIASFRKKLAIRNLEFLQVSGITHLIEL 720
Query: 1088 ALDVKVPSNWVKINSTKKTIRYHPPEVLAALDELSLANEELMVASRDAWDGFLSGFSRYY 1147
+D KVP NWVK+NSTKKTIRYHPPE++A LDEL+LA E L + +R +WD FL FSRYY
Sbjct: 721 PVDSKVPMNWVKVNSTKKTIRYHPPEIVAGLDELALATEHLAIVNRASWDSFLKSFSRYY 780
Query: 1148 AEFQSAVQALASIDCLYSLAILSRHKNYVRPEFVHVDEPAQIVICSGRHPVLESTLQGNF 1207
+F++AVQALA++DCL+SL+ LSR+KNYVRPEFV EP +I I SGRHPVLE+ LQ NF
Sbjct: 781 TDFKAAVQALAALDCLHSLSTLSRNKNYVRPEFVDDCEPVEINIQSGRHPVLETILQDNF 840
Query: 1208 VPNDTNLDVNGEHCQIVTGPNMGGKSCYIRQVALIALMAQVGSYVPAFSAKLHVLDGIYT 1267
VPNDT L GE+CQI+TGPNMGGKSCYIRQVALI++MAQVGS+VPA AKLHVLDG++T
Sbjct: 841 VPNDTILHAEGEYCQIITGPNMGGKSCYIRQVALISIMAQVGSFVPASFAKLHVLDGVFT 900
Query: 1268 RMGASDSIQQGRSTFLEEMTETSHILHHSTSRSLVIIDELGRGTSTHDGVAIAYAALHNL 1327
RMGASDSIQ GRSTFLEE++E SHI+ +SRSLVI+DELGRGTSTHDGVAIAYA L +L
Sbjct: 901 RMGASDSIQHGRSTFLEELSEASHIIRTCSSRSLVILDELGRGTSTHDGVAIAYATLQHL 960
Query: 1328 LHHKKCLVLFVTHYPKVADITKEFPASAGVYHVSYLTSHETPSFSGPKSAQDVIYLYKLV 1387
L K+CLVLFVTHYP++A+I+ FP S G YHVSYLT + G DV YLYKLV
Sbjct: 961 LAEKRCLVLFVTHYPEIAEISNGFPGSVGTYHVSYLTLQKD---KGSYDHDDVTYLYKLV 1020
Query: 1388 PGIAESSFGFKVAQLAQIPLSCIARATEMGVWLEEIVTRRAQRKTREIHLQEASGKGLEL 1424
G+ SFGFKVAQLAQIP SCI RA M LE A+ + RE + + +G E
Sbjct: 1021 RGLCSRSFGFKVAQLAQIPPSCIRRAISMAAKLE------AEVRARERNTRMGEPEGHEE 1060
BLAST of CmoCh16G001350 vs. ExPASy Swiss-Prot
Match:
P13705 (DNA mismatch repair protein Msh3 OS=Mus musculus OX=10090 GN=Msh3 PE=2 SV=3)
HSP 1 Score: 546.6 bits (1407), Expect = 8.7e-154
Identity = 336/919 (36.56%), Postives = 508/919 (55.28%), Query Frame = 0
Query: 490 YTPLELQVVDLKKRYPDVLLMVEVGYRYRFFGQDAEIAARVLGIYAHLDRNFMTASIPTF 549
YTPLELQ +D+K+++ D +L VE GY+YRFFG+DAEIAAR L IY HLD NFMTASIPT
Sbjct: 187 YTPLELQYLDMKQQHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTH 246
Query: 550 RLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATL--EAIQNLG 609
RL VHVRRLV+ GYKVGVVKQTETAA+KA G NK F R L+ALYTK+TL E + L
Sbjct: 247 RLFVHVRRLVAKGYKVGVVKQTETAALKAIGDNKSSVFSRKLTALYTKSTLIGEDVNPLI 306
Query: 610 GAEEGCG-------GESNYLFCVVEKSMLVDNLDRRIEYGVDVKIGMVAMEISTGDVIYR 669
++ +NYL C+ E+ + + + ++ +G+V ++ +TG+V++
Sbjct: 307 RLDDSVNIDEVMTDTSTNYLLCIYEEKENIKDKKKG-----NLSVGVVGVQPATGEVVFD 366
Query: 670 EYDDNFMRSGLEAMLLSLSPAELLLGDPISKATEKVFDRVGSLSFTVALNAVACCTDCVV 729
+ D+ R LE + SL P ELLL +S+ TE + R ++S V +
Sbjct: 367 CFQDSASRLELETRISSLQPVELLLPSDLSEPTEMLIQRATNVSVRDDRIRVERMNNTYF 426
Query: 730 CYAGPASNVRVEHVSRDCFKDGS---------------ALAEVMSLYENIDKDNLAADHH 789
Y+ V + GS ALA V+ + + + + +
Sbjct: 427 EYSHAFQTVTEFYAREIVDSQGSQSLSGVINLEKPVICALAAVIRYLKEFNLEKMLSKPE 486
Query: 790 DPDTVLAERKSDRI------AIKVLKNNDDGSETGSLLQCMNHTLTIFGSRLLRQWITHP 849
+ + + RI +++++N D GSLL ++HT T FG R L+ W+T P
Sbjct: 487 SFKQLSSGMEFMRINGTTLRNLEMVQNQTDMKTKGSLLWVLDHTKTSFGRRKLKNWVTQP 546
Query: 850 LCERDMIIARQEAVSEIAAAMVSSKVTQNIRESDEEDSDVMVIEPELNYILSSVLTTLGR 909
L + I AR +AVS++ + S + + L +
Sbjct: 547 LLKLREINARLDAVSDVLHSESS--------------------------VFEQIENLLRK 606
Query: 910 APDIQRGITRIFHRTAAPSEFIAVIQAILYAGKQLQQFHIDEEDDNYSSESMIGSKLLRK 969
PD++RG+ I+H+ + EF +++++ +LQ + S + S LLR
Sbjct: 607 LPDVERGLCSIYHKKCSTQEFFLIVKSLCQLKSELQAL-------MPAVNSHVQSDLLRA 666
Query: 970 LILSASSSGLISIAAKLLSTISKEAADQGDLPNLMIINNDQFPKVARARKEAQSAREKLD 1029
LI+ L+S L ++ AA GD L +D FP + + + E Q +
Sbjct: 667 LIVE-----LLSPVEHYLKVLNGPAAKVGDKTELFKDLSD-FPLIKKRKNEIQEVIHSIQ 726
Query: 1030 SLITVYRKQLGMRKLEFISVSGTTHLIELALDVK--VPSNWVKINSTKKTIRYHPPEVLA 1089
+ +RK L + L++++VSG +IE+ +P++WVK+ STK R+HPP ++
Sbjct: 727 MRLQEFRKILKLPSLQYVTVSGQEFMIEIKNSAVSCIPADWVKVGSTKAVSRFHPPFIVE 786
Query: 1090 ALDELSLANEELMVASRDAWDGFLSGFSRYYAEFQSAVQALASIDCLYSLAILSRHKNYV 1149
+ L+ E+L++ W GFL F +Y AV LA++DC++SLA +++ NY
Sbjct: 787 SYRRLNQLREQLVLDCNAEWLGFLENFGEHYHTLCKAVDHLATVDCIFSLAKVAKQGNYC 846
Query: 1150 RPEFVHVDEPAQIVICSGRHPVLESTL--QGNFVPNDTNLDVNGEHCQIVTGPNMGGKSC 1209
RP + E +I+I +GRHP+++ L Q FVPN T+L + E I+TGPNMGGKS
Sbjct: 847 RPT---LQEEKKIIIKNGRHPMIDVLLGEQDQFVPNSTSLS-DSERVMIITGPNMGGKSS 906
Query: 1210 YIRQVALIALMAQVGSYVPAFSAKLHVLDGIYTRMGASDSIQQGRSTFLEEMTETSHILH 1269
YI+QV L+ +MAQ+GSYVPA A + ++DGI+TRMGA+D+I +GRSTF+E++T+T+ I+
Sbjct: 907 YIKQVTLVTIMAQIGSYVPAEEATIGIVDGIFTRMGAADNIYKGRSTFMEQLTDTAEIIR 966
Query: 1270 HSTSRSLVIIDELGRGTSTHDGVAIAYAALHNLLHHKKCLVLFVTHYPKVADITKEFPAS 1329
++ +SLVI+DELGRGTSTHDG+AIAYA L + K L LFVTHYP V ++ K +P
Sbjct: 967 RASPQSLVILDELGRGTSTHDGIAIAYATLEYFIRDVKSLTLFVTHYPPVCELEKCYPEQ 1026
Query: 1330 AGVYHVSYLTSH-ETPSFSG--PKSAQDVIYLYKLVPGIAESSFGFKVAQLAQIPLSCIA 1372
G YH+ +L + E+ SG + V +LY++ GIA S+G VA+LA +P +
Sbjct: 1027 VGNYHMGFLVNEDESKQDSGDMEQMPDSVTFLYQITRGIAARSYGLNVAKLADVPREVLQ 1057
BLAST of CmoCh16G001350 vs. ExPASy Swiss-Prot
Match:
P20585 (DNA mismatch repair protein Msh3 OS=Homo sapiens OX=9606 GN=MSH3 PE=1 SV=4)
HSP 1 Score: 540.4 bits (1391), Expect = 6.3e-152
Identity = 340/920 (36.96%), Postives = 511/920 (55.54%), Query Frame = 0
Query: 490 YTPLELQVVDLKKRYPDVLLMVEVGYRYRFFGQDAEIAARVLGIYAHLDRNFMTASIPTF 549
YTPLELQ +++K+++ D +L VE GY+YRFFG+DAEIAAR L IY HLD NFMTASIPT
Sbjct: 229 YTPLELQYIEMKQQHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTH 288
Query: 550 RLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATL--EAIQNLG 609
RL VHVRRLV+ GYKVGVVKQTETAA+KA G N+ F R L+ALYTK+TL E + L
Sbjct: 289 RLFVHVRRLVAKGYKVGVVKQTETAALKAIGDNRSSLFSRKLTALYTKSTLIGEDVNPLI 348
Query: 610 GAEEGCGGE-------SNYLFCVVEKSMLVDNLDRRIEYGVDVKIGMVAMEISTGDVIYR 669
++ + ++YL C+ E V R + ++ IG+V ++ +TG+V++
Sbjct: 349 KLDDAVNVDEIMTDTSTSYLLCISENKENV-----RDKKKGNIFIGIVGVQPATGEVVFD 408
Query: 670 EYDDNFMRSGLEAMLLSLSPAELLLGDPISKATEKVFDRVGSLSFTVALNAVACCTDCVV 729
+ D+ RS LE + SL P ELLL +S+ TE + R S+S V +
Sbjct: 409 SFQDSASRSELETRMSSLQPVELLLPSALSEQTEALIHRATSVSVQDDRIRVERMDNIYF 468
Query: 730 CYAGPASNVRVEHVSRDCFKDGS---------------ALAEVMSLYENIDKDNLAADHH 789
Y+ V + GS +LA ++ + + + + +
Sbjct: 469 EYSHAFQAVTEFYAKDTVDIKGSQIISGIVNLEKPVICSLAAIIKYLKEFNLEKMLSKPE 528
Query: 790 DPDTVLAERKSDRI------AIKVLKNNDDGSETGSLLQCMNHTLTIFGSRLLRQWITHP 849
+ + ++ + I +++L+N D GSLL ++HT T FG R L++W+T P
Sbjct: 529 NFKQLSSKMEFMTINGTTLRNLEILQNQTDMKTKGSLLWVLDHTKTSFGRRKLKKWVTQP 588
Query: 850 LCERDMIIARQEAVSEIAAAMVSSKVTQNIRESDEEDSDVMVIEPELNYILSSVLTTLGR 909
L + I AR +AVSE+ + S + + L +
Sbjct: 589 LLKLREINARLDAVSEVLHSESS--------------------------VFGQIENHLRK 648
Query: 910 APDIQRGITRIFHRTAAPSEFIAVIQAILYAGKQLQQFHIDEEDDNYSSESMIGSKLLRK 969
PDI+RG+ I+H+ + EF +++ + + + Q + S I S LLR
Sbjct: 649 LPDIERGLCSIYHKKCSTQEFFLIVKTLYHLKSEFQAI-------IPAVNSHIQSDLLRT 708
Query: 970 LILSASSSGLISIAAKLLSTISKEAADQGDLPNLMIINNDQFPKVARARKEAQSAREKLD 1029
+IL L+S L ++++AA GD L +D FP + + + E Q +++
Sbjct: 709 VILEIPE--LLSPVEHYLKILNEQAAKVGDKTELFKDLSD-FPLIKKRKDEIQGVIDEIR 768
Query: 1030 SLITVYRKQLGMRKLEFISVSGTTHLIELALDVK--VPSNWVKINSTKKTIRYHPPEVLA 1089
+ RK L ++++VSG +IE+ +P++WVK+ STK R+H P ++
Sbjct: 769 MHLQEIRKILKNPSAQYVTVSGQEFMIEIKNSAVSCIPTDWVKVGSTKAVSRFHSPFIVE 828
Query: 1090 ALDELSLANEELMVASRDAWDGFLSGFSRYYAEFQSAVQALASIDCLYSLAILSRHKNYV 1149
L+ E+L++ W FL FS +Y AV LA++DC++SLA +++ +Y
Sbjct: 829 NYRHLNQLREQLVLDCSAEWLDFLEKFSEHYHSLCKAVHHLATVDCIFSLAKVAKQGDYC 888
Query: 1150 RPEFVHVDEPAQIVICSGRHPVLESTL--QGNFVPNDTNLDVNGEHCQIVTGPNMGGKSC 1209
RP V E +IVI +GRHPV++ L Q +VPN+T+L + E I+TGPNMGGKS
Sbjct: 889 RPT---VQEERKIVIKNGRHPVIDVLLGEQDQYVPNNTDLSEDSERVMIITGPNMGGKSS 948
Query: 1210 YIRQVALIALMAQVGSYVPAFSAKLHVLDGIYTRMGASDSIQQGRSTFLEEMTETSHILH 1269
YI+QVALI +MAQ+GSYVPA A + ++DGI+TRMGA+D+I +G+STF+EE+T+T+ I+
Sbjct: 949 YIKQVALITIMAQIGSYVPAEEATIGIVDGIFTRMGAADNIYKGQSTFMEELTDTAEIIR 1008
Query: 1270 HSTSRSLVIIDELGRGTSTHDGVAIAYAALHNLLHHKKCLVLFVTHYPKVADITKEFPAS 1329
+TS+SLVI+DELGRGTSTHDG+AIAYA L + K L LFVTHYP V ++ K +
Sbjct: 1009 KATSQSLVILDELGRGTSTHDGIAIAYATLEYFIRDVKSLTLFVTHYPPVCELEKNYSHQ 1068
Query: 1330 AGVYHVSYLTSHETPSFSGPKSAQD----VIYLYKLVPGIAESSFGFKVAQLAQIPLSCI 1372
G YH+ +L S E S P +A+ V +LY++ GIA S+G VA+LA +P +
Sbjct: 1069 VGNYHMGFLVS-EDESKLDPGAAEQVPDFVTFLYQITRGIAARSYGLNVAKLADVPGEIL 1103
BLAST of CmoCh16G001350 vs. ExPASy Swiss-Prot
Match:
Q1ZXH0 (DNA mismatch repair protein Msh3 OS=Dictyostelium discoideum OX=44689 GN=msh3 PE=3 SV=1)
HSP 1 Score: 501.9 bits (1291), Expect = 2.5e-140
Identity = 340/991 (34.31%), Postives = 516/991 (52.07%), Query Frame = 0
Query: 474 ESSNQNPKAPTGGDAK---------YTPLELQVVDLKKRYPDVLLMVEVGYRYRFFGQDA 533
+ ++ K PT G +K YTPLE Q + +KK PD +LMVE GY+Y+FFG+DA
Sbjct: 428 DDEDEEVKKPTKGGSKASAKKKGPAYTPLEQQYIAIKKENPDTVLMVECGYKYKFFGEDA 487
Query: 534 EIAARVLGIYAHLDRNFMTASIPTFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKL 593
E+A +VL IY+++ +NF+ SIPT RL H+RRLV AGYKVG+V+QTETAA+KA S+K
Sbjct: 488 EVANKVLNIYSYVAKNFLNCSIPTQRLFFHLRRLVMAGYKVGIVEQTETAALKAISSSKS 547
Query: 594 GPFCRGLSALYTKATL-----------EAIQNLGGAEEGCGGESNYLFCVVEKSMLVDNL 653
PF R L+ +YT +T + Q L E N ++ + +
Sbjct: 548 QPFERKLTRVYTSSTFIDDDIDDQLTSSSPQFLVSFYESTPKNKNDDVIKKQRDNEEEGI 607
Query: 654 DRRIEYGVDVKIGMVAMEISTGDVIYREYDDNFMRSGLEAMLLSLSPAELLLGDPISKAT 713
D E I VA+ + TG++IY + DN MRS LE +L + P+E+L+ +
Sbjct: 608 DSSNESSTST-ISFVAVSVKTGEIIYDTFKDNVMRSQLETILTHIKPSEILIPPTTTTVN 667
Query: 714 -EKVFDRVGSLSFTVALNAVACCTDCVVCYAGPASNVRVEHVSRDCFKDGSALAEVMSLY 773
+KV + +G+ + + + C+ Y ++NVR + + + +L +++ Y
Sbjct: 668 KQKVNNGIGTNHYYFS----NLTSKCLKTYT-KSTNVRTQAMDSQLYDYEYSLGKLIDFY 727
Query: 774 ENIDKDNLAADHHDPDTVLAERKSDR---------------------------------- 833
E D+ N ++++ + VL KS
Sbjct: 728 E--DESNNNNNNNNCEDVLKFVKSTLNKEQIICLGILLSYLNEFIHFGSILKVESNFKAF 787
Query: 834 -------------IAIKVLKNNDDGSETGSLLQCMNHTLTIFGSRLLRQWITHPLCERDM 893
+ +++L N D E GSL+ MN T T GSR+ WI PL + ++
Sbjct: 788 RVSNHLVLPHSTIVNLELLVNESDNKEKGSLIWLMNRTSTFSGSRMFINWICKPLNQLEL 847
Query: 894 IIARQEAVSEIAAAMVSSKVTQNIRESDEEDSDVMVIEPELNYILSSVLTTLGRAPDIQR 953
I RQ+AV E+ V I+ I+S + PD+QR
Sbjct: 848 IKERQDAVEEL----------------------VNGIKTNSPPIVSIISLFKSHIPDLQR 907
Query: 954 GITRIFHRT-AAPSEFIAVIQAILYAGKQLQQFHIDEEDDNYSSESMIGSKLLRKLIL-- 1013
++RI+++ P EF+ + ++ + + +E +N +S S LL +
Sbjct: 908 NLSRIYYKVQCTPKEFLNTMTSL------QRIVELFKEINNNNSSYKFNSTLLNSIFKLQ 967
Query: 1014 ------SASSSGLISIAAKL-------LSTISKEAADQ-----GDLPNLMIINNDQFPKV 1073
+ S I KL LS I+KE A + D NL ++ +++ K+
Sbjct: 968 NDNKDGDSDSFDYIGGEDKLSKRIKYFLSNINKETAKEYGTVGCDKSNLW-VDLEKYEKI 1027
Query: 1074 ARARKEAQSAREKLDSLITVYRKQLGMRKLEFISVS--GTTHLIELALDVK-VPSNWVKI 1133
+++ + ++ +++ RK+L LE+ + G +L+EL K VP +W+K+
Sbjct: 1028 RETKEKIEQVEKEFKNVLKNIRKELSKPSLEYHHMPGLGLEYLLELPPSFKAVPKSWIKV 1087
Query: 1134 NSTKKTIRYHPPEVLAALDELSLANEELMVASRDAWDGFLSGFSRYYAEFQSAVQALASI 1193
NST+K RYH PEVL L LS + E L + S+++W FL FS Y+ F + V ++++
Sbjct: 1088 NSTQKMARYHAPEVLEQLKILSQSRETLKIQSQESWISFLGEFSVDYSLFSNFVNKISNL 1147
Query: 1194 DCLYSLAILSRHKNYVRPEFVHVDEPAQIVICSGRHPVLESTL---QGNFVPNDTNLDVN 1253
DCL+SLA +S + Y+RP+FV + I I +GRHPV+E+ L G++VPN L +
Sbjct: 1148 DCLFSLAKVSSLEGYIRPQFVKEKKDGGIQIENGRHPVVEAILSGSDGSYVPNTIELRES 1207
Query: 1254 GEHCQIVTGPNMGGKSCYIRQVALIALMAQVGSYVPAFSAKLHVLDGIYTRMGASDSIQQ 1313
I+TGPNMGGKS +RQ ALI +MAQVG +VPA S L V D IYTRMGA DSI
Sbjct: 1208 ACKSMIITGPNMGGKSSLLRQTALIVIMAQVGCFVPATSCSLSVFDAIYTRMGARDSIGT 1267
Query: 1314 GRSTFLEEMTETSHILHHSTSRSLVIIDELGRGTSTHDGVAIAYAALHNLLHHKKCLVLF 1370
G+STF E+ ETS IL +ST +LVI+DELGRGTST+DGVAIAY+ L ++ KC LF
Sbjct: 1268 GKSTFFIELEETSDILKNSTQNTLVILDELGRGTSTNDGVAIAYSTLKYIVEVMKCYCLF 1327
BLAST of CmoCh16G001350 vs. ExPASy Swiss-Prot
Match:
A1DCB2 (DNA mismatch repair protein msh3 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=msh3 PE=3 SV=1)
HSP 1 Score: 496.9 bits (1278), Expect = 7.9e-139
Identity = 328/944 (34.75%), Postives = 510/944 (54.03%), Query Frame = 0
Query: 486 GDAKYTPLELQVVDLKKRYPDVLLMVEVGYRYRFFGQDAEIAARVLGIY----------- 545
G +K TPLE QV+++K+++ D +L++EVGY++RFFG+DA IAA+ L I
Sbjct: 200 GGSKLTPLEKQVIEIKRKHMDTVLVIEVGYKFRFFGEDARIAAKELSIVCIPGKMRFDEH 259
Query: 546 ---AHLDRNFMTASIPTFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGL 605
AHLDR F +ASIP RL+VHV+RLVSAGYKVGVV+Q ETAA+KA G N+ PF R L
Sbjct: 260 PSEAHLDR-FASASIPVHRLHVHVKRLVSAGYKVGVVRQLETAALKAVGDNRNAPFSRKL 319
Query: 606 SALYTKAT-LEAIQNLGGAEEGCGG----ESNYLFCVVEKSMLVDNLDRRIEYGVDVKIG 665
+ LYTK T ++ ++ L GA G + Y+ C+ E + D + V +G
Sbjct: 320 TNLYTKGTYVDDVEGLDGATPAASGGASPATGYMLCITETNAKGWGNDEK------VHVG 379
Query: 666 MVAMEISTGDVIYREYDDNFMRSGLEAMLLSLSPAELLLGDPISKATEKV---------- 725
+VA++ +TGD+IY +++D FMRS +EA LL ++P EL++ +SKATEK+
Sbjct: 380 IVAVQPNTGDIIYDDFEDGFMRSEVEARLLHIAPCELVIVGELSKATEKLVQHLSGSKLN 439
Query: 726 -------FDRVGSLSFTVA-------------LNAVACCTDCVVCYAGPASNV--RVEHV 785
DRV VA L A D PASN+ +V ++
Sbjct: 440 TFGDKVRVDRVAKKKTAVAESHSHVANFYAAKLKAANTADD------APASNLLQKVLNL 499
Query: 786 SRDCFKDGSALAEVMSLY--ENIDKDNLAADHHDPDTVLAERKSDRIAIKVLKNNDDGSE 845
SA+ E ++ Y E+I + H + + + +++++ +N D S
Sbjct: 500 PEQVTVCLSAMIEHLTEYGLEHIFELTKYFQHFSSRSHMLLNANTLVSLEIYQNQTDHSA 559
Query: 846 TGSLLQCMNHTLTIFGSRLLRQWITHPLCERDMIIARQEAVSEIAAAMVSSKVTQNIRES 905
GSL ++ T T FG RLLR+W+ PL +++ + R AV E+ +
Sbjct: 560 KGSLFWTLDRTQTRFGQRLLRKWVGRPLLDKERLEERVNAVEELKS-------------- 619
Query: 906 DEEDSDVMVIEPELNYILSSVLTTLGR-APDIQRGITRIFHRTAAPSEFIAVIQAILYAG 965
P+ + + LGR D+++ + RI++ E + V+Q +
Sbjct: 620 -----------PDRTVQVERLKILLGRIKSDLEKNLIRIYYGKCTRPELLTVLQTL---- 679
Query: 966 KQLQQFHID---EEDDNYSSESMIGSKLLRKLILSASSSGLISIAAKLLSTISKEAADQG 1025
+ + Q ++D ED ++S ++G + R ++ K L+ I+ AA
Sbjct: 680 QTIAQEYVDVKTPEDSGFTS-PILGEAIAR-------VPSILEDVVKFLNKINMHAARND 739
Query: 1026 DLPNLMIINNDQFPKVARARKEAQSAREKLDSLITVYRKQLGMRKLEFISVSGTTHLIEL 1085
D +++ ++ + S +L+ +V L K+ +++ SG +LIE+
Sbjct: 740 DKYE-FFRESEETEGISEHKCGIASVEHELEEHRSVAAGILKWPKVTYVTSSGIEYLIEV 799
Query: 1086 ----ALDVKVPSNWVKINSTKKTIRYHPPEVLAALDELSLANEELMVASRDAWDGFLSGF 1145
A +VP++WVK++ TKK R+H PEV+ L + E L A A+ L+
Sbjct: 800 ENTAAAIKRVPASWVKVSGTKKLSRFHTPEVIQLLRQRDQHKEALAAACDQAFAALLAEI 859
Query: 1146 SRYYAEFQSAVQALASIDCLYSLAILSRHKNYVRPEFVHVDEPAQIVICSGRHPVLESTL 1205
+ Y F+ +VQ+LA++DCL SLA ++ YV+PE+ + I + GRHP++E L
Sbjct: 860 ATNYQSFRDSVQSLATLDCLLSLAAIASQPGYVKPEYT---DQTCIHVEQGRHPMVEQLL 919
Query: 1206 QGNFVPNDTNLDVNGEHCQIVTGPNMGGKSCYIRQVALIALMAQVGSYVPAFSAKLHVLD 1265
++VPND +LD + +VTGPNMGGKS Y+RQ+ALIA+MAQ+GSYVPA SAKL +LD
Sbjct: 920 LDSYVPNDIDLDSDRTRALLVTGPNMGGKSSYVRQIALIAIMAQIGSYVPARSAKLGMLD 979
Query: 1266 GIYTRMGASDSIQQGRSTFLEEMTETSHILHHSTSRSLVIIDELGRGTSTHDGVAIAYAA 1325
++TRMGA D++ G STF+ E++ET+ IL +T RSLVI+DELGRGTSTHDGVAIA A
Sbjct: 980 AVFTRMGAFDNMLAGESTFMVELSETADILKQATPRSLVILDELGRGTSTHDGVAIAQAV 1039
Query: 1326 LHNLLHHKKCLVLFVTHYPKVADITKEFPASAGVYHVSYLTSHETPSFSGPKSAQDVIYL 1369
L ++ + L LF+THY ++++ + FP + H + SG +++ +L
Sbjct: 1040 LDYMVRTIRSLTLFITHYQHLSNMAQSFP------NHELRNVHMRFTESGSGKDEEITFL 1083
BLAST of CmoCh16G001350 vs. ExPASy TrEMBL
Match:
A0A6J1E5H0 (DNA mismatch repair protein OS=Cucurbita moschata OX=3662 GN=LOC111430887 PE=3 SV=1)
HSP 1 Score: 1993.0 bits (5162), Expect = 0.0e+00
Identity = 1046/1127 (92.81%), Postives = 1049/1127 (93.08%), Query Frame = 0
Query: 368 MGKQKQQVISRFFAPKPKSPSVSSSSSSALAPPTQSFSPPKISATVTFSPSKRLISSALA 427
MGKQKQQVISRFFAPKPKSPSVSSSSSSALAPPTQSFSPPKISATVTFSPSKRLISSALA
Sbjct: 1 MGKQKQQVISRFFAPKPKSPSVSSSSSSALAPPTQSFSPPKISATVTFSPSKRLISSALA 60
Query: 428 SQLTPPKSSKRPKLSPHTHNPLPSVSNPSLHKRFLEKFLEPIENSFESSNQNPKAPTGGD 487
SQLTPPKSSKRPKLSPHTHNPLPSVSNPSLHKRFLEKFLEPIENSFESSNQNPKAPTGGD
Sbjct: 61 SQLTPPKSSKRPKLSPHTHNPLPSVSNPSLHKRFLEKFLEPIENSFESSNQNPKAPTGGD 120
Query: 488 AKYTPLELQVVDLKKRYPDVLLMVEVGYRYRFFGQDAEIAARVLGIYAHLDRNFMTASIP 547
AKYTPLELQVVDLKKRYPDVLLMVEVGYRYRFFGQDAEIAARVLGIYAHLDRNFMTASIP
Sbjct: 121 AKYTPLELQVVDLKKRYPDVLLMVEVGYRYRFFGQDAEIAARVLGIYAHLDRNFMTASIP 180
Query: 548 TFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATLEAIQNLG 607
TFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATLEAIQNLG
Sbjct: 181 TFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATLEAIQNLG 240
Query: 608 GAEEGCGGESNYLFCVVEKSMLVDNLDRRIEYGVDVKIGMVAMEISTGDVIYREYDDNFM 667
GAEEGCGGESNYLFCVVEKSMLVDNLDRRIEYGVDVKIGMVAMEISTGDVIYREYDDNFM
Sbjct: 241 GAEEGCGGESNYLFCVVEKSMLVDNLDRRIEYGVDVKIGMVAMEISTGDVIYREYDDNFM 300
Query: 668 RSGLEAMLLSLSPAELLLGDPISKATEKVFDRVGSLSFTVALNAVACCTDCVVCYAGPAS 727
RSGLEAMLLSLSPAELLLGDPISKATEK+ ++ YAGPAS
Sbjct: 301 RSGLEAMLLSLSPAELLLGDPISKATEKL----------------------LLGYAGPAS 360
Query: 728 NVRVEHVSRDCFKDGSALAEVMSLYENIDKDNLAADHHDPDTVLAERKSDRIAIK----- 787
NVRVEHVSRDCFKDGSALAEVMSLYENIDKDNLAADHHDPDTVLAERKSDRIAIK
Sbjct: 361 NVRVEHVSRDCFKDGSALAEVMSLYENIDKDNLAADHHDPDTVLAERKSDRIAIKEIMNM 420
Query: 788 --------------------------------------------------VLKNNDDGSE 847
VLKNNDDGSE
Sbjct: 421 PNLALQALALTIRYLKQFGLERIVSLGSSFRPFSCKMEMTLSGNTLTQLEVLKNNDDGSE 480
Query: 848 TGSLLQCMNHTLTIFGSRLLRQWITHPLCERDMIIARQEAVSEIAAAMVSSKVTQNIRES 907
TGSLLQCMNHTLTIFGSRLLRQWITHPLCERDMIIARQEAVSEIAAAMVSSKVTQNIRES
Sbjct: 481 TGSLLQCMNHTLTIFGSRLLRQWITHPLCERDMIIARQEAVSEIAAAMVSSKVTQNIRES 540
Query: 908 DEEDSDVMVIEPELNYILSSVLTTLGRAPDIQRGITRIFHRTAAPSEFIAVIQAILYAGK 967
DEEDSDVMVIEPELNYILSSVLTTLGRAPDIQRGITRIFHRTAAPSEFIAVIQAILYAGK
Sbjct: 541 DEEDSDVMVIEPELNYILSSVLTTLGRAPDIQRGITRIFHRTAAPSEFIAVIQAILYAGK 600
Query: 968 QLQQFHIDEEDDNYSSESMIGSKLLRKLILSASSSGLISIAAKLLSTISKEAADQGDLPN 1027
QLQQFHIDEEDDNYSSESMIGSKLLRKLILSASSSGLISIAAKLLSTISKEAADQGDLPN
Sbjct: 601 QLQQFHIDEEDDNYSSESMIGSKLLRKLILSASSSGLISIAAKLLSTISKEAADQGDLPN 660
Query: 1028 LMIINNDQFPKVARARKEAQSAREKLDSLITVYRKQLGMRKLEFISVSGTTHLIELALDV 1087
LMIINNDQFPKVARARKEAQSAREKLDSLITVYRKQLGMRKLEFISVSGTTHLIELALDV
Sbjct: 661 LMIINNDQFPKVARARKEAQSAREKLDSLITVYRKQLGMRKLEFISVSGTTHLIELALDV 720
Query: 1088 KVPSNWVKINSTKKTIRYHPPEVLAALDELSLANEELMVASRDAWDGFLSGFSRYYAEFQ 1147
KVPSNWVKINSTKKTIRYHPPEVLAALDELSLANEELMVASRDAWDGFLSGFSRYYAEFQ
Sbjct: 721 KVPSNWVKINSTKKTIRYHPPEVLAALDELSLANEELMVASRDAWDGFLSGFSRYYAEFQ 780
Query: 1148 SAVQALASIDCLYSLAILSRHKNYVRPEFVHVDEPAQIVICSGRHPVLESTLQGNFVPND 1207
SAVQALASIDCLYSLAILSRHKNYVRPEFVHVDEPAQIVICSGRHPVLESTLQGNFVPND
Sbjct: 781 SAVQALASIDCLYSLAILSRHKNYVRPEFVHVDEPAQIVICSGRHPVLESTLQGNFVPND 840
Query: 1208 TNLDVNGEHCQIVTGPNMGGKSCYIRQVALIALMAQVGSYVPAFSAKLHVLDGIYTRMGA 1267
TNLDVNGEHCQIVTGPNMGGKSCYIRQVALIALMAQVGSYVPAFSAKLHVLDGIYTRMGA
Sbjct: 841 TNLDVNGEHCQIVTGPNMGGKSCYIRQVALIALMAQVGSYVPAFSAKLHVLDGIYTRMGA 900
Query: 1268 SDSIQQGRSTFLEEMTETSHILHHSTSRSLVIIDELGRGTSTHDGVAIAYAALHNLLHHK 1327
SDSIQQGRSTFLEEMTETSHILHHSTSRSLVIIDELGRGTSTHDGVAIAYAALHNLLHHK
Sbjct: 901 SDSIQQGRSTFLEEMTETSHILHHSTSRSLVIIDELGRGTSTHDGVAIAYAALHNLLHHK 960
Query: 1328 KCLVLFVTHYPKVADITKEFPASAGVYHVSYLTSHETPSFSGPKSAQDVIYLYKLVPGIA 1387
KCLVLFVTHYPKVADITKEFPASAGVYHVSYLTSHETPSFSGPKSAQDVIYLYKLVPGIA
Sbjct: 961 KCLVLFVTHYPKVADITKEFPASAGVYHVSYLTSHETPSFSGPKSAQDVIYLYKLVPGIA 1020
Query: 1388 ESSFGFKVAQLAQIPLSCIARATEMGVWLEEIVTRRAQRKTREIHLQEASGKGLELESSE 1440
ESSFGFKVAQLAQIPLSCIARATEMGVWLEEIVTRRAQRKTREIHLQEASGKGLELESSE
Sbjct: 1021 ESSFGFKVAQLAQIPLSCIARATEMGVWLEEIVTRRAQRKTREIHLQEASGKGLELESSE 1080
BLAST of CmoCh16G001350 vs. ExPASy TrEMBL
Match:
A0A6J1J5R3 (DNA mismatch repair protein OS=Cucurbita maxima OX=3661 GN=LOC111482846 PE=3 SV=1)
HSP 1 Score: 1958.7 bits (5073), Expect = 0.0e+00
Identity = 1026/1127 (91.04%), Postives = 1039/1127 (92.19%), Query Frame = 0
Query: 368 MGKQKQQVISRFFAPKPKSPSVSSSSSSALAPPTQSFSPPKISATVTFSPSKRLISSALA 427
MGKQKQQVISRFFAPKPKSPSVSSSSSSALAPPTQ FSPPKISATVTFSPSKRLISSALA
Sbjct: 1 MGKQKQQVISRFFAPKPKSPSVSSSSSSALAPPTQPFSPPKISATVTFSPSKRLISSALA 60
Query: 428 SQLTPPKSSKRPKLSPHTHNPLPSVSNPSLHKRFLEKFLEPIENSFESSNQNPKAPTGGD 487
SQLTPPKSSKRPKLSPHTHNPLPSVSNP+LHKRFLEKFL+PIENSFESSNQNPKAPTGGD
Sbjct: 61 SQLTPPKSSKRPKLSPHTHNPLPSVSNPALHKRFLEKFLQPIENSFESSNQNPKAPTGGD 120
Query: 488 AKYTPLELQVVDLKKRYPDVLLMVEVGYRYRFFGQDAEIAARVLGIYAHLDRNFMTASIP 547
AKYTPLELQVVDLKKRYPDVLLMVEVGYRYRFFGQDAEIAARVLGIYAHLDRNFMTASIP
Sbjct: 121 AKYTPLELQVVDLKKRYPDVLLMVEVGYRYRFFGQDAEIAARVLGIYAHLDRNFMTASIP 180
Query: 548 TFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATLEAIQNLG 607
TFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATLEA+QNLG
Sbjct: 181 TFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATLEAVQNLG 240
Query: 608 GAEEGCGGESNYLFCVVEKSMLVDNLDRRIEYGVDVKIGMVAMEISTGDVIYREYDDNFM 667
GAEEGCGGESNYLFCVVEKSMLVDNLD RIEYGVDVKIGMVAMEISTGDVIYREYDDNFM
Sbjct: 241 GAEEGCGGESNYLFCVVEKSMLVDNLDSRIEYGVDVKIGMVAMEISTGDVIYREYDDNFM 300
Query: 668 RSGLEAMLLSLSPAELLLGDPISKATEKVFDRVGSLSFTVALNAVACCTDCVVCYAGPAS 727
RSGLEAMLLSLSPAELLLGDPISKATEK+ ++ YAGPAS
Sbjct: 301 RSGLEAMLLSLSPAELLLGDPISKATEKL----------------------LLGYAGPAS 360
Query: 728 NVRVEHVSRDCFKDGSALAEVMSLYENIDKDNLAADHHDPDTVLAERKSDRIAIK----- 787
NVRVEHVSRDCFKDGSALAEV SLYENIDKDNLAADHHDPDTVLA RKSDRIAIK
Sbjct: 361 NVRVEHVSRDCFKDGSALAEVTSLYENIDKDNLAADHHDPDTVLAGRKSDRIAIKEIMNM 420
Query: 788 --------------------------------------------------VLKNNDDGSE 847
VLKNNDDGSE
Sbjct: 421 PNLALQALALTIRYLKQFGLERIVSLGSSFRPFSCKMEMTLSGNTLTQLEVLKNNDDGSE 480
Query: 848 TGSLLQCMNHTLTIFGSRLLRQWITHPLCERDMIIARQEAVSEIAAAMVSSKVTQNIRES 907
TGSLLQCMNHTLTIFGSRLLRQWITHPLCERDMIIARQEAVSEIAAAMVS+KV+QNIRES
Sbjct: 481 TGSLLQCMNHTLTIFGSRLLRQWITHPLCERDMIIARQEAVSEIAAAMVSTKVSQNIRES 540
Query: 908 DEEDSDVMVIEPELNYILSSVLTTLGRAPDIQRGITRIFHRTAAPSEFIAVIQAILYAGK 967
+EEDSDVMVIEPELNYILSSVLTTLGRAPDIQRGITRIFHRTAAPSEFIAVIQAILYAGK
Sbjct: 541 EEEDSDVMVIEPELNYILSSVLTTLGRAPDIQRGITRIFHRTAAPSEFIAVIQAILYAGK 600
Query: 968 QLQQFHIDEEDDNYSSESMIGSKLLRKLILSASSSGLISIAAKLLSTISKEAADQGDLPN 1027
QLQQFHIDEEDDNYSSESMIGSKLLRKLILSASSSGLISIAAKLLSTISKEAADQGDLPN
Sbjct: 601 QLQQFHIDEEDDNYSSESMIGSKLLRKLILSASSSGLISIAAKLLSTISKEAADQGDLPN 660
Query: 1028 LMIINNDQFPKVARARKEAQSAREKLDSLITVYRKQLGMRKLEFISVSGTTHLIELALDV 1087
LMIINNDQFPKVARARKEAQSAREKLDSLIT+YRKQLGMRKLEF SVSGTTHLIELALDV
Sbjct: 661 LMIINNDQFPKVARARKEAQSAREKLDSLITIYRKQLGMRKLEFTSVSGTTHLIELALDV 720
Query: 1088 KVPSNWVKINSTKKTIRYHPPEVLAALDELSLANEELMVASRDAWDGFLSGFSRYYAEFQ 1147
KVPSNWVKINSTKKTIRYHPPEVLAALDELSLANEELMVASR+AWDGFLSGFSRYYAEFQ
Sbjct: 721 KVPSNWVKINSTKKTIRYHPPEVLAALDELSLANEELMVASREAWDGFLSGFSRYYAEFQ 780
Query: 1148 SAVQALASIDCLYSLAILSRHKNYVRPEFVHVDEPAQIVICSGRHPVLESTLQGNFVPND 1207
SAVQALASIDCLYSLAILSRHKNYVRPEFVH DEPAQIVICSGRHPVLEST+QGNFVPND
Sbjct: 781 SAVQALASIDCLYSLAILSRHKNYVRPEFVHDDEPAQIVICSGRHPVLESTVQGNFVPND 840
Query: 1208 TNLDVNGEHCQIVTGPNMGGKSCYIRQVALIALMAQVGSYVPAFSAKLHVLDGIYTRMGA 1267
TNLDVNGEHCQIVTGPNMGGKSCYIRQVALIALMAQVGSYVPAFSAKLHVLDGIYTRMGA
Sbjct: 841 TNLDVNGEHCQIVTGPNMGGKSCYIRQVALIALMAQVGSYVPAFSAKLHVLDGIYTRMGA 900
Query: 1268 SDSIQQGRSTFLEEMTETSHILHHSTSRSLVIIDELGRGTSTHDGVAIAYAALHNLLHHK 1327
SDSIQQGRSTFLEEMTETSHILHHSTSRSLVIIDELGRGTSTHDGVAIAYAAL NLLHHK
Sbjct: 901 SDSIQQGRSTFLEEMTETSHILHHSTSRSLVIIDELGRGTSTHDGVAIAYAALQNLLHHK 960
Query: 1328 KCLVLFVTHYPKVADITKEFPASAGVYHVSYLTSHETPSFSGPKSAQDVIYLYKLVPGIA 1387
KCLVLFVTHYPKVADITKEFPASAGVYHVSYLTSHE PSFSGPKSAQDVIYLYKLVPGIA
Sbjct: 961 KCLVLFVTHYPKVADITKEFPASAGVYHVSYLTSHERPSFSGPKSAQDVIYLYKLVPGIA 1020
Query: 1388 ESSFGFKVAQLAQIPLSCIARATEMGVWLEEIVTRRAQRKTREIHLQEASGKGLELESSE 1440
ESSFGFKVAQLAQIPL CIARATEMGVWLEEIVTRRAQRKTRE+HLQEASGKGLELESSE
Sbjct: 1021 ESSFGFKVAQLAQIPLPCIARATEMGVWLEEIVTRRAQRKTREMHLQEASGKGLELESSE 1080
BLAST of CmoCh16G001350 vs. ExPASy TrEMBL
Match:
A0A1S3AXV2 (DNA mismatch repair protein MSH3 OS=Cucumis melo OX=3656 GN=LOC103484070 PE=4 SV=1)
HSP 1 Score: 1740.7 bits (4507), Expect = 0.0e+00
Identity = 934/1169 (79.90%), Postives = 989/1169 (84.60%), Query Frame = 0
Query: 336 QNEKARQSGGHRVCVNASVCV---RTETKFWSANFMGKQKQQVISRFFAPKPKSPSVSSS 395
QNEKARQ G VCVN + V R+ F S NFMGKQKQQVISRFFAPKPK PS+SSS
Sbjct: 44 QNEKARQGNGQSVCVNGNAFVSERRSNYGFCSENFMGKQKQQVISRFFAPKPKFPSLSSS 103
Query: 396 SSSA-----LAPPTQSFSPPKISATVTFSPSKRLISSALASQLTPPKSSKRPKLSPHTHN 455
SSS+ + PTQ FSP K+SATVTFSPSKRLISSA+ASQLTPPKSSKRPKLSPHTHN
Sbjct: 104 SSSSATAADITLPTQPFSPAKVSATVTFSPSKRLISSAIASQLTPPKSSKRPKLSPHTHN 163
Query: 456 PLPSVSNPSLHKRFLEKFLEPIENSFESSNQNPKAPTGGDA--KYTPLELQVVDLKKRYP 515
PLPS+ NPSLH+RFL+KFLEP ++SF+ SNQNP+ GGD KYTPLE QVVDLKKR+P
Sbjct: 164 PLPSIPNPSLHQRFLDKFLEPTDDSFQPSNQNPRTSNGGDPKYKYTPLEQQVVDLKKRFP 223
Query: 516 DVLLMVEVGYRYRFFGQDAEIAARVLGIYAHLDRNFMTASIPTFRLNVHVRRLVSAGYKV 575
DVLLMVEVGYRYRFFGQDAEIAARVLGIYAHLD NFMTASIPTFRLNVHVRRLVSAGYKV
Sbjct: 224 DVLLMVEVGYRYRFFGQDAEIAARVLGIYAHLDHNFMTASIPTFRLNVHVRRLVSAGYKV 283
Query: 576 GVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATLEAIQNLGGAEEGCGGESNYLFCVVE 635
GVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATLEA Q+LGGAEEGC GESNYLFC+VE
Sbjct: 284 GVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATLEAAQDLGGAEEGCAGESNYLFCLVE 343
Query: 636 KSMLVDNLDRRIEYGVDVKIGMVAMEISTGDVIYREYDDNFMRSGLEAMLLSLSPAELLL 695
SMLVDNLD RIE GVDVKIG+VAMEISTGDVIYREYDDNFMRSGLEAMLLSL+PAELLL
Sbjct: 344 NSMLVDNLDCRIENGVDVKIGIVAMEISTGDVIYREYDDNFMRSGLEAMLLSLAPAELLL 403
Query: 696 GDPISKATEKVFDRVGSLSFTVALNAVACCTDCVVCYAGPASNVRVEHVSRDCFKDGSAL 755
GDPISK TEK+ ++ YAGPASNVRVE VSRDCFK+GSAL
Sbjct: 404 GDPISKPTEKL----------------------LLGYAGPASNVRVERVSRDCFKNGSAL 463
Query: 756 AEVMSLYENIDKDNLAADHHDPDTVLAERKSDRIAIK----------------------- 815
AEVMSLYENID+DNL D ++P+TVL +KSD AIK
Sbjct: 464 AEVMSLYENIDQDNLTED-NNPETVLIGQKSDLTAIKEIVNMPNLALQAFALTIRHLKQF 523
Query: 816 --------------------------------VLKNNDDGSETGSLLQCMNHTLTIFGSR 875
VLKNNDDGSETGSLL CMNHTLTIFGSR
Sbjct: 524 GLERVVSLASSFRPFSCKMEMTLSGNTLTQLEVLKNNDDGSETGSLLHCMNHTLTIFGSR 583
Query: 876 LLRQWITHPLCERDMIIARQEAVSEIAAAMVSSKVTQNIRESDEEDSDVMVIEPELNYIL 935
LLRQWITHPLC+R+MIIARQEAVSEIAA+MVSSKV+ N DEEDSDV+VIEPELNYIL
Sbjct: 584 LLRQWITHPLCDRNMIIARQEAVSEIAASMVSSKVSSNNGVLDEEDSDVIVIEPELNYIL 643
Query: 936 SSVLTTLGRAPDIQRGITRIFHRTAAPSEFIAVIQAILYAGKQLQQFHIDEEDDNYSSES 995
SSVLTTLGRAPDIQRGITRIFHRTAAPSEFIAVIQAIL+AGKQLQQFHIDEEDDN SSES
Sbjct: 644 SSVLTTLGRAPDIQRGITRIFHRTAAPSEFIAVIQAILFAGKQLQQFHIDEEDDNCSSES 703
Query: 996 MIGSKLLRKLILSASSSGLISIAAKLLSTISKEAADQGDLPNLMIINNDQFPKVARARKE 1055
+IGSKLLRKLILSASSSGLI+IAAKLLSTISKEAADQGD PNLMII +DQ+PKVARARKE
Sbjct: 704 IIGSKLLRKLILSASSSGLINIAAKLLSTISKEAADQGDFPNLMIIYSDQYPKVARARKE 763
Query: 1056 AQSAREKLDSLITVYRKQLGMRKLEFISVSGTTHLIELALDVKVPSNWVKINSTKKTIRY 1115
AQSAREKLD+LIT YRKQLGMRKLEF SVSGTTHLIELA+DVKVPS WVKINSTKKT+RY
Sbjct: 764 AQSAREKLDALITFYRKQLGMRKLEFTSVSGTTHLIELAIDVKVPSKWVKINSTKKTVRY 823
Query: 1116 HPPEVLAALDELSLANEELMVASRDAWDGFLSGFSRYYAEFQSAVQALASIDCLYSLAIL 1175
HPPEVLAALDELSLANEELMVASRDAWD FL GFSRYYAEFQ+AVQALASIDCLYSLAIL
Sbjct: 824 HPPEVLAALDELSLANEELMVASRDAWDDFLRGFSRYYAEFQAAVQALASIDCLYSLAIL 883
Query: 1176 SRHKNYVRPEFVHVDEPAQIVICSGRHPVLESTLQGNFVPNDTNLDVNGEHCQIVTGPNM 1235
SR+KNY RPEFVH DEPAQI ICSGRHPVLE TLQGNFVPNDTNLD NGEHCQIVTGPNM
Sbjct: 884 SRNKNYARPEFVHDDEPAQIHICSGRHPVLEGTLQGNFVPNDTNLDANGEHCQIVTGPNM 943
Query: 1236 GGKSCYIRQVALIALMAQVGSYVPAFSAKLHVLDGIYTRMGASDSIQQGRSTFLEEMTET 1295
GGKSCYIRQVALIALM+QVGS+VPAFSAKLHVLDGIYTRMGASDSIQQGRSTFLEEMTET
Sbjct: 944 GGKSCYIRQVALIALMSQVGSFVPAFSAKLHVLDGIYTRMGASDSIQQGRSTFLEEMTET 1003
Query: 1296 SHILHHSTSRSLVIIDELGRGTSTHDGVAIAYAALHNLLHHKKCLVLFVTHYPKVADITK 1355
SHIL HS+SRSLVIIDELGRGTSTHDGVAIAYAALHNLL KKCLVLFVTHYPKVA+I K
Sbjct: 1004 SHILRHSSSRSLVIIDELGRGTSTHDGVAIAYAALHNLLQQKKCLVLFVTHYPKVAEIAK 1063
Query: 1356 EFPASAGVYHVSYLTSHETPSFSGPKSAQDVIYLYKLVPGIAESSFGFKVAQLAQIPLSC 1415
EFPA A YHVSYLTSH+ PS SG KS +DV YLYKLVPG+AESSFGFKVAQLAQIPLSC
Sbjct: 1064 EFPACARAYHVSYLTSHKNPSLSGQKSTEDVTYLYKLVPGVAESSFGFKVAQLAQIPLSC 1123
Query: 1416 IARATEMGVWLEEIVTRRAQRKTREIHLQEASGKGLELESSECFLEDRIDAYEEFFLFLK 1440
IARATEMG+WLEEIV RRAQ K+RE HL E S KGLE +S + FLE RID YEEFFLFLK
Sbjct: 1124 IARATEMGIWLEEIVARRAQHKSRE-HLPEISVKGLEWQSFQSFLE-RIDGYEEFFLFLK 1183
BLAST of CmoCh16G001350 vs. ExPASy TrEMBL
Match:
A0A0A0L5V6 (DNA mismatch repair protein OS=Cucumis sativus OX=3659 GN=Csa_3G182010 PE=3 SV=1)
HSP 1 Score: 1701.4 bits (4405), Expect = 0.0e+00
Identity = 912/1135 (80.35%), Postives = 968/1135 (85.29%), Query Frame = 0
Query: 368 MGKQKQQVISRFFAPKPKSPSVSSSSSSA------LAPPTQSFSPPKISATVTFSPSKRL 427
MGKQKQQVISRFFAPKPKSPS+SSSSSS+ + PPTQ FSP K+SATVTFSPSKRL
Sbjct: 1 MGKQKQQVISRFFAPKPKSPSLSSSSSSSSATAADITPPTQPFSPAKVSATVTFSPSKRL 60
Query: 428 ISSALASQLTPPKSSKRPKLSPHTHNPLPSVSNPSLHKRFLEKFLEPIENSFESSNQNPK 487
ISSA+ASQLTPPKSSKRPKLSPHTHNPLPS+ NPSLH+RFL+K LEP ++SF+ SNQNP+
Sbjct: 61 ISSAIASQLTPPKSSKRPKLSPHTHNPLPSIPNPSLHQRFLDKLLEPTDDSFQPSNQNPR 120
Query: 488 APTGGDA--KYTPLELQVVDLKKRYPDVLLMVEVGYRYRFFGQDAEIAARVLGIYAHLDR 547
G D KYTPLE QVVDLKKRYPDVLLMVEVGYRYRFFGQDA IAARVLGIYAHLD
Sbjct: 121 TSNGADPKYKYTPLEQQVVDLKKRYPDVLLMVEVGYRYRFFGQDAVIAARVLGIYAHLDH 180
Query: 548 NFMTASIPTFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKAT 607
NFMTASIPTFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKAT
Sbjct: 181 NFMTASIPTFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKAT 240
Query: 608 LEAIQNLGGAEEGCGGESNYLFCVVEKSMLVDNLDRRIEYGVDVKIGMVAMEISTGDVIY 667
LEA Q+LGGAEEGC GESNYLFC+VE SM V N+D RIE GVDVKIGMVAMEISTGDVIY
Sbjct: 241 LEAAQDLGGAEEGCAGESNYLFCLVENSMSVQNVDCRIENGVDVKIGMVAMEISTGDVIY 300
Query: 668 REYDDNFMRSGLEAMLLSLSPAELLLGDPISKATEKVFDRVGSLSFTVALNAVACCTDCV 727
EYDDNFMR+GLEAMLLSLSPAELLLGDPISK TEK+ +
Sbjct: 301 GEYDDNFMRNGLEAMLLSLSPAELLLGDPISKPTEKL----------------------L 360
Query: 728 VCYAGPASNVRVEHVSRDCFKDGSALAEVMSLYENIDKDNLAADHHDPDTVLAERKSDRI 787
+ YAGPA NVRVE VS DCFKDGSALAEVMSLYENID++N D ++P+ VL +KS+R
Sbjct: 361 LGYAGPALNVRVERVSGDCFKDGSALAEVMSLYENIDQNNFTED-NNPEKVLVGQKSNRS 420
Query: 788 AIK-------------------------------------------------------VL 847
AIK VL
Sbjct: 421 AIKEIVNMPNLALQALALTIRHLKQFGLERIVSLASSFRPFSCKMEMTLSGNTLTQLEVL 480
Query: 848 KNNDDGSETGSLLQCMNHTLTIFGSRLLRQWITHPLCERDMIIARQEAVSEIAAAMVSSK 907
KNNDDGSETGSLL CMNHTLTIFGSRLLRQWITHPLC+R+MIIARQEAVSEIAA+MVSSK
Sbjct: 481 KNNDDGSETGSLLHCMNHTLTIFGSRLLRQWITHPLCDRNMIIARQEAVSEIAASMVSSK 540
Query: 908 VTQNIRESDEEDSDVMVIEPELNYILSSVLTTLGRAPDIQRGITRIFHRTAAPSEFIAVI 967
V+ N R DEE SDV+VIEPELNYILSSVLTTLGRAPDIQRGITRIFHRTAAPSEFIAVI
Sbjct: 541 VSPNNRALDEEYSDVIVIEPELNYILSSVLTTLGRAPDIQRGITRIFHRTAAPSEFIAVI 600
Query: 968 QAILYAGKQLQQFHIDEEDDNYSSESMIGSKLLRKLILSASSSGLISIAAKLLSTISKEA 1027
QAIL+AGKQLQQFHIDEEDDN SSES+IGSKLLRKLILSASSSGLI+IAAKLLSTISKEA
Sbjct: 601 QAILFAGKQLQQFHIDEEDDNCSSESIIGSKLLRKLILSASSSGLINIAAKLLSTISKEA 660
Query: 1028 ADQGDLPNLMIINNDQFPKVARARKEAQSAREKLDSLITVYRKQLGMRKLEFISVSGTTH 1087
ADQGD PNLMII +DQFPKVARARKEAQSAREKLD+LIT YRKQLGMRKLEF SVSGTTH
Sbjct: 661 ADQGDFPNLMIIYSDQFPKVARARKEAQSAREKLDALITFYRKQLGMRKLEFTSVSGTTH 720
Query: 1088 LIELALDVKVPSNWVKINSTKKTIRYHPPEVLAALDELSLANEELMVASRDAWDGFLSGF 1147
LIELA+DVKVPS WVKINSTKKT+RYHPPEVLAALDELSLANEELMVASRDAWD FL GF
Sbjct: 721 LIELAIDVKVPSQWVKINSTKKTVRYHPPEVLAALDELSLANEELMVASRDAWDDFLRGF 780
Query: 1148 SRYYAEFQSAVQALASIDCLYSLAILSRHKNYVRPEFVHVDEPAQIVICSGRHPVLESTL 1207
SRYYAEFQ+AVQALASIDCLYSLAILSR+KNY RPEFV DEPAQI +CSGRHPVLE TL
Sbjct: 781 SRYYAEFQAAVQALASIDCLYSLAILSRNKNYARPEFVPDDEPAQIHLCSGRHPVLEGTL 840
Query: 1208 QGNFVPNDTNLDVNGEHCQIVTGPNMGGKSCYIRQVALIALMAQVGSYVPAFSAKLHVLD 1267
QGNFVPNDTNLD NGEHCQIVTGPNMGGKSCYIRQVALIALM+QVGS+VPAFSAKLHVLD
Sbjct: 841 QGNFVPNDTNLDANGEHCQIVTGPNMGGKSCYIRQVALIALMSQVGSFVPAFSAKLHVLD 900
Query: 1268 GIYTRMGASDSIQQGRSTFLEEMTETSHILHHSTSRSLVIIDELGRGTSTHDGVAIAYAA 1327
GIYTRMGASDSIQQGRSTFLEEMTETSHIL HS+SRSLVIIDELGRGTSTHDGVAIAYAA
Sbjct: 901 GIYTRMGASDSIQQGRSTFLEEMTETSHILRHSSSRSLVIIDELGRGTSTHDGVAIAYAA 960
Query: 1328 LHNLLHHKKCLVLFVTHYPKVADITKEFPASAGVYHVSYLTSHETPSFSGPKSAQDVIYL 1387
LH+LL KKCLVLFVTHYPKVA+I KEFPASAGVYHVSYLTSH++PS SGPKS +DV YL
Sbjct: 961 LHSLLQQKKCLVLFVTHYPKVAEIAKEFPASAGVYHVSYLTSHKSPSLSGPKSTEDVTYL 1020
Query: 1388 YKLVPGIAESSFGFKVAQLAQIPLSCIARATEMGVWLEEIVTRRAQRKTREIHLQEASGK 1440
YKL+ G+AESSFGFKVAQLAQIPLSCIARATEMGVWLEEIVTRRAQRK+ E HL EAS K
Sbjct: 1021 YKLISGVAESSFGFKVAQLAQIPLSCIARATEMGVWLEEIVTRRAQRKSTEQHLAEASVK 1080
BLAST of CmoCh16G001350 vs. ExPASy TrEMBL
Match:
A0A5A7SWU6 (DNA mismatch repair protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold386G00120 PE=3 SV=1)
HSP 1 Score: 1695.6 bits (4390), Expect = 0.0e+00
Identity = 921/1190 (77.39%), Postives = 976/1190 (82.02%), Query Frame = 0
Query: 368 MGKQKQQVISRFFAPKPKSPSVSSSSSSA-----LAPPTQSFSPPKISATVTFSPSKRLI 427
MGKQKQQVISRFFAPKPK PS+SSSSSS+ + PTQ FSP K+SATVTFSPSKRLI
Sbjct: 1 MGKQKQQVISRFFAPKPKFPSLSSSSSSSATAADITLPTQPFSPAKVSATVTFSPSKRLI 60
Query: 428 SSALASQLTPPKSSKRPKLSPHTHNPLPSVSNPSLHKRFLEKFLEPIENSFESSNQNPKA 487
SSA+ASQLTPPKSSKRPKLSPHTHNPLPS+ NPSLH+RFL+KFLEP ++SF+ SNQNP+
Sbjct: 61 SSAIASQLTPPKSSKRPKLSPHTHNPLPSIPNPSLHQRFLDKFLEPTDDSFQPSNQNPRT 120
Query: 488 PTGGDA--KYTPLELQVVDLKKRYPDVLLMVEVGYRYRFFGQDAEIAARVLGIYAHLDRN 547
G D KYTPLE QVVDLKKRYPDVLLMVEVGYRYRFFGQDAEIAARVLGIYAHLD N
Sbjct: 121 SNGADPKYKYTPLEQQVVDLKKRYPDVLLMVEVGYRYRFFGQDAEIAARVLGIYAHLDHN 180
Query: 548 FMTASIPTFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATL 607
FMTASIPTFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATL
Sbjct: 181 FMTASIPTFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATL 240
Query: 608 EAIQNLGGAEEGCGGESNYLFCVVEKSMLVDNLDRRIEYGVDVKIGMVAMEISTGDVIYR 667
EA Q+LGGAEEGC GESNYLFC+VE SMLVDNLD RIE GVDVKIG+VAMEISTGDVIYR
Sbjct: 241 EAAQDLGGAEEGCAGESNYLFCLVENSMLVDNLDCRIENGVDVKIGIVAMEISTGDVIYR 300
Query: 668 EYDDNFMRSGLEAMLLSLSPAELLLGDPISKATEKVFDRVGSLSFTVAL----------- 727
EYDDNFMRSGLEAMLLSL+PAELLLGDPISK TEKV V S+ V+L
Sbjct: 301 EYDDNFMRSGLEAMLLSLAPAELLLGDPISKPTEKVVVEV-SVRMDVSLYDEKDTMEEGS 360
Query: 728 ----------NAVACCTDC-----------------------------------VVCYAG 787
+A DC ++ YAG
Sbjct: 361 GYFLGKCWVCGLIALIRDCLDAILRTFPRRAEIQEPGSLENGGRHSSRLSSNLLLLGYAG 420
Query: 788 PASNVRVEHVSRDCFKDGSALAEVMSLYENIDKDNLAADHHDPDTVLAERKSDRIAIK-- 847
PASNVRVE SRDCFK+GSALAEVMSLYENID+DNL D ++P+TVL +KSD AIK
Sbjct: 421 PASNVRVERASRDCFKNGSALAEVMSLYENIDQDNLTED-NNPETVLIGQKSDLTAIKEI 480
Query: 848 -----------------------------------------------------VLKNNDD 907
VLKNNDD
Sbjct: 481 VNMPNLALQAFALTIRHLKQFGLERVVSLASSFRPFSCKMEMTLSGNTLTQLEVLKNNDD 540
Query: 908 GSETGSLLQCMNHTLTIFGSRLLRQWITHPLCERDMIIARQEAVSEIAAAMVSSKVTQNI 967
GSETGSLL CMNHTLTIFGSRLLRQWITHPLC+R+MIIARQEAVSEIAA+MVSSKV+ N
Sbjct: 541 GSETGSLLHCMNHTLTIFGSRLLRQWITHPLCDRNMIIARQEAVSEIAASMVSSKVSSNN 600
Query: 968 RESDEEDSDVMVIEPELNYILSSVLTTLGRAPDIQRGITRIFHRTAAPSEFIAVIQAILY 1027
DEEDSDV+VIEPELNYILSSVLTTLGRAPDIQRGITRIFHRTAAPSEFIAVIQAIL+
Sbjct: 601 GVLDEEDSDVIVIEPELNYILSSVLTTLGRAPDIQRGITRIFHRTAAPSEFIAVIQAILF 660
Query: 1028 AGKQLQQFHIDEEDDNYSSESMIGSKLLRKLILSASSSGLISIAAKLLSTISKEAADQGD 1087
AGKQLQQFHIDEEDDN SSES+IGSKLLRKLILSASSSGLI+IAAKLLSTISKEAADQGD
Sbjct: 661 AGKQLQQFHIDEEDDNCSSESIIGSKLLRKLILSASSSGLINIAAKLLSTISKEAADQGD 720
Query: 1088 LPNLMIINNDQFPKVARARKEAQSAREKLDSLITVYRKQLGMRKLEFISVSGTTHLIELA 1147
PNLMII +DQ+PKVARARKEAQSAREKLD+LIT YRKQLGMR LEF SVSGTTHLIELA
Sbjct: 721 FPNLMIIYSDQYPKVARARKEAQSAREKLDALITFYRKQLGMRNLEFTSVSGTTHLIELA 780
Query: 1148 LDVKVPSNWVKINSTKKTIRYHPPEVLAALDELSLANEELMVASRDAWDGFLSGFSRYYA 1207
+DVKVPS WVKINSTKKT+RYHPPEVLAALDELSLANEELMVASRDAWD FL GFSRYYA
Sbjct: 781 IDVKVPSKWVKINSTKKTVRYHPPEVLAALDELSLANEELMVASRDAWDDFLRGFSRYYA 840
Query: 1208 EFQSAVQALASIDCLYSLAILSRHKNYVRPEFVHVDEPAQIVICSGRHPVLESTLQGNFV 1267
EFQ+AVQALASIDCLYSLAILSR+KNY RPEFVH DEPAQI ICSGRHPVLE TLQGNFV
Sbjct: 841 EFQAAVQALASIDCLYSLAILSRNKNYARPEFVHDDEPAQIHICSGRHPVLEGTLQGNFV 900
Query: 1268 PNDTNLDVNGEHCQIVTGPNMGGKSCYIRQVALIALMAQVGSYVPAFSAKLHVLDGIYTR 1327
PNDTNLD NGEHCQIVTGPNMGGKSCYIRQVALIALM+QVGS+VPAFSAKLHVLDGIYTR
Sbjct: 901 PNDTNLDANGEHCQIVTGPNMGGKSCYIRQVALIALMSQVGSFVPAFSAKLHVLDGIYTR 960
Query: 1328 MGASDSIQQGRSTFLEEMTETSHILHHSTSRSLVIIDELGRGTSTHDGVAIAYAALHNLL 1387
MGASDSIQQGRSTFLEEMTETSHIL HS+SRSLVIIDELGRGTSTHDGVAIAYAALHNLL
Sbjct: 961 MGASDSIQQGRSTFLEEMTETSHILRHSSSRSLVIIDELGRGTSTHDGVAIAYAALHNLL 1020
Query: 1388 HHKKCLVLFVTHYPKVADITKEFPASAGVYHVSYLTSHETPSFSGPKSAQDVIYLYKLVP 1440
KKCLVLFVTHYPKVA+I KEFPA A YHVSYLTSH+ PS SG KS +DV YLYKLVP
Sbjct: 1021 QQKKCLVLFVTHYPKVAEIAKEFPACARAYHVSYLTSHKNPSLSGQKSTEDVTYLYKLVP 1080
BLAST of CmoCh16G001350 vs. NCBI nr
Match:
KAG7014774.1 (DNA mismatch repair protein MSH3, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 2778.0 bits (7200), Expect = 0.0e+00
Identity = 1418/1521 (93.23%), Postives = 1427/1521 (93.82%), Query Frame = 0
Query: 1 MLESGRPKAGFRLVIIDGRAYVEKFMDAYQSRDKFTLWGILQLLRLYPGKIPDLDLMFNC 60
M+ESGRPKAGFRLVIIDGRAYVEKFMDAYQSRDKFTLWGILQLLRLYPGKIPDLDLMFNC
Sbjct: 120 MVESGRPKAGFRLVIIDGRAYVEKFMDAYQSRDKFTLWGILQLLRLYPGKIPDLDLMFNC 179
Query: 61 EDRPNIFIGDYSGPGPNSTAPPPVFRYCGDDDTLDIVFPDWSFWGWPEINIKPWVPLMED 120
EDRPNIFIGDYSGPGPNSTAPPP+FRYCGDDDTLDIVFPDWSFWGWPEINIKPWVPLMED
Sbjct: 180 EDRPNIFIGDYSGPGPNSTAPPPLFRYCGDDDTLDIVFPDWSFWGWPEINIKPWVPLMED 239
Query: 121 LKQGNKRTKWSNREAHAYWKGNIKVSMVRYKLLGCNLSREHDWKARVFMQDWDKEQEQRF 180
LKQGNKRTKWSNREA+AYWKGNIKVSMVRYKLL CNLSREHDWKARVFMQDWDKEQ++RF
Sbjct: 240 LKQGNKRTKWSNREAYAYWKGNIKVSMVRYKLLECNLSREHDWKARVFMQDWDKEQKERF 299
Query: 181 KNSNLADQCVHRYKIYVEGVGWSVSLKYILACDSVTLMVNPYYYDFFTRSLVPMHHYWPI 240
KNSNLADQCVHRYKIYVEGVGWSVSLKYILACDSVTLMVNPYYYDFFTRSLVPMHHYWPI
Sbjct: 300 KNSNLADQCVHRYKIYVEGVGWSVSLKYILACDSVTLMVNPYYYDFFTRSLVPMHHYWPI 359
Query: 241 KDDDDMCNSIKFAVDWGNTHQQKVRAIGKAASKFTEEQLRMEKVYDYMFHSLNEYSKLLT 300
KDDDDMCNSIKFAV WGNTHQQKVRAIGKAASKFTEE+LRMEKVYDYMFHSLNEYSKLLT
Sbjct: 360 KDDDDMCNSIKFAVYWGNTHQQKVRAIGKAASKFTEEELRMEKVYDYMFHSLNEYSKLLT 419
Query: 301 FKPTIPPNATELCLEELACPAQDLATKFMIDTLVKQNEKARQSGGHRVCVNASVCVRTET 360
FKPTIPPNATELCLEELACPAQDLATKFMIDTLVKQNEKARQSGGHRVC+NASVCVRTET
Sbjct: 420 FKPTIPPNATELCLEELACPAQDLATKFMIDTLVKQNEKARQSGGHRVCINASVCVRTET 479
Query: 361 KFWSANFMGKQKQQVISRFFAPKPKSPSV---SSSSSSALAPPTQSFSPPKISATVTFSP 420
KFWSANFMGKQKQQVISRFFAPKPKSPSV SSSSSSALAPPTQ FSPPKISATVTFSP
Sbjct: 480 KFWSANFMGKQKQQVISRFFAPKPKSPSVSSSSSSSSSALAPPTQPFSPPKISATVTFSP 539
Query: 421 SKRLISSALASQLTPPKSSKRPKLSPHTHNPLPSVSNPSLHKRFLEKFLEPIENSFESSN 480
SKRLISSALASQLTPPKSSKRPKLSPHTHNPLPSVSNPSLHKRFLEKFLEPIENSFESSN
Sbjct: 540 SKRLISSALASQLTPPKSSKRPKLSPHTHNPLPSVSNPSLHKRFLEKFLEPIENSFESSN 599
Query: 481 QNPKAPTGGDAKYTPLELQVVDLKKRYPDVLLMVEVGYRYRFFGQDAEIAARVLGIYAHL 540
QNPKAPTGGDAKYTPLELQVVDLKKRYPDVLLMVEVGYRYRFFG+DAEIAARVLGIYAHL
Sbjct: 600 QNPKAPTGGDAKYTPLELQVVDLKKRYPDVLLMVEVGYRYRFFGKDAEIAARVLGIYAHL 659
Query: 541 DRNFMTASIPTFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTK 600
DRNFMTASIPTFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTK
Sbjct: 660 DRNFMTASIPTFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTK 719
Query: 601 ATLEAIQNLGGAEEGCGGESNYLFCVVEKSMLVDNLDRRIEYGVDVKIGMVAMEISTGDV 660
ATLEA+QNLGGAEEGCGGESNYLFCVVEKSMLVDNLDRRIEYGVDVKIGMVAMEISTGDV
Sbjct: 720 ATLEAVQNLGGAEEGCGGESNYLFCVVEKSMLVDNLDRRIEYGVDVKIGMVAMEISTGDV 779
Query: 661 IYREYDDNFMRSGLEAMLLSLSPAELLLGDPISKATEKVFDRVGSLSFTVALNAVACCTD 720
IYREYDDNFMRSGLEAMLLSLSPAELLLGDPISKATEKVFDRVGSLSFTVALNAVACCTD
Sbjct: 780 IYREYDDNFMRSGLEAMLLSLSPAELLLGDPISKATEKVFDRVGSLSFTVALNAVACCTD 839
Query: 721 CVVC---------YAGPASNVRVEHVSRDCFKDGSALAEVMSLYENIDKDNLAADHHDPD 780
CVV YAGPASNVRVEHVSRDCFKDGSALAEVMSLYENID DNLAADHHDPD
Sbjct: 840 CVVSIVCDQLLLGYAGPASNVRVEHVSRDCFKDGSALAEVMSLYENIDNDNLAADHHDPD 899
Query: 781 TVLAERKSDRIAIK---------------------------------------------- 840
TVLA RKSDRIAIK
Sbjct: 900 TVLAGRKSDRIAIKEIMNMPNLALQALALTIRYLKQFGLERIVSLGSSFRPFSCKMEMTL 959
Query: 841 ---------VLKNNDDGSETGSLLQCMNHTLTIFGSRLLRQWITHPLCERDMIIARQEAV 900
VLKNNDDGSETGSLLQCMNHTLTIFGSRLLRQWITHPLCERDMIIARQEAV
Sbjct: 960 SGNTLTQLEVLKNNDDGSETGSLLQCMNHTLTIFGSRLLRQWITHPLCERDMIIARQEAV 1019
Query: 901 SEIAAAMVSSKVTQNIRESDEEDSDVMVIEPELNYILSSVLTTLGRAPDIQRGITRIFHR 960
SEIAAAMVSSKV QNIRESDEEDSDVMVIEPELNYILSSVLTTLG APDIQRGITRIFHR
Sbjct: 1020 SEIAAAMVSSKVYQNIRESDEEDSDVMVIEPELNYILSSVLTTLGGAPDIQRGITRIFHR 1079
Query: 961 TAAPSE----------------FIAVIQAILYAGKQLQQFHIDEEDDNYSSESMIGSKLL 1020
TAAPSE FIAVIQAILYAGKQLQQFHIDEEDDNYSSESMIGSKLL
Sbjct: 1080 TAAPSEDDGSDISVSGLSFRFAFIAVIQAILYAGKQLQQFHIDEEDDNYSSESMIGSKLL 1139
Query: 1021 RKLILSASSSGLISIAAKLLSTISKEAADQGDLPNLMIINNDQFPKVARARKEAQSAREK 1080
RKLILSASSSGLISIAAKLLSTISKEAADQGDLPNLMIINNDQFPKVARARKEAQSAREK
Sbjct: 1140 RKLILSASSSGLISIAAKLLSTISKEAADQGDLPNLMIINNDQFPKVARARKEAQSAREK 1199
Query: 1081 LDSLITVYRKQLGMRKLEFISVSGTTHLIELALDVKVPSNWVKINSTKKTIRYHPPEVLA 1140
LDSLITVYRKQLGMRKLEFISVSGTTHLIELALDVKVPSNWVKINSTKKTIRYHPPEVLA
Sbjct: 1200 LDSLITVYRKQLGMRKLEFISVSGTTHLIELALDVKVPSNWVKINSTKKTIRYHPPEVLA 1259
Query: 1141 ALDELSLANEELMVASRDAWDGFLSGFSRYYAEFQSAVQALASIDCLYSLAILSRHKNYV 1200
ALDELSLANEELMVASRDAWDGFLSGFSRYYAEFQSAVQALASIDCLYSLAILSRHKNYV
Sbjct: 1260 ALDELSLANEELMVASRDAWDGFLSGFSRYYAEFQSAVQALASIDCLYSLAILSRHKNYV 1319
Query: 1201 RPEFVHVDEPAQIVICSGRHPVLESTLQGNFVPNDTNLDVNGEHCQIVTGPNMGGKSCYI 1260
RPEFVH DEPAQIVICSGRHPVLESTLQGNFVPNDTNLDVNGEHCQIVTGPNMGGKSCYI
Sbjct: 1320 RPEFVHDDEPAQIVICSGRHPVLESTLQGNFVPNDTNLDVNGEHCQIVTGPNMGGKSCYI 1379
Query: 1261 RQVALIALMAQVGSYVPAFSAKLHVLDGIYTRMGASDSIQQGRSTFLEEMTETSHILHHS 1320
RQVALIALMAQVGSYVPAFS KLHVLDGIYTRMGASDSIQQGRSTFLEEMTETSHILHHS
Sbjct: 1380 RQVALIALMAQVGSYVPAFSVKLHVLDGIYTRMGASDSIQQGRSTFLEEMTETSHILHHS 1439
Query: 1321 TSRSLVIIDELGRGTSTHDGVAIAYAALHNLLHHKKCLVLFVTHYPKVADITKEFPASAG 1380
TS SLVIIDELGRGTSTHDGVAIAYAALHNLLHHKKCLVLFVTHYPKVADITKEFPASAG
Sbjct: 1440 TSHSLVIIDELGRGTSTHDGVAIAYAALHNLLHHKKCLVLFVTHYPKVADITKEFPASAG 1499
Query: 1381 VYHVSYLTSHETPSFSGPKSAQDVIYLYKLVPGIAESSFGFKVAQLAQIPLSCIARATEM 1439
VYHVSYLTSHETPSFSGPKSAQDVIYLYKLVPGIAESSFGFKVAQLAQIPLSCIARATEM
Sbjct: 1500 VYHVSYLTSHETPSFSGPKSAQDVIYLYKLVPGIAESSFGFKVAQLAQIPLSCIARATEM 1559
BLAST of CmoCh16G001350 vs. NCBI nr
Match:
KAG6576729.1 (DNA mismatch repair protein MSH3, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 2025.4 bits (5246), Expect = 0.0e+00
Identity = 1063/1139 (93.33%), Postives = 1065/1139 (93.50%), Query Frame = 0
Query: 368 MGKQKQQVISRFFAPKPKSPSV---SSSSSSALAPPTQSFSPPKISATVTFSPSKRLISS 427
MGKQKQQVISRFFAPKPKSPSV SSSSSSALAPPTQ FSPPKISATVTFSPSKRLISS
Sbjct: 1 MGKQKQQVISRFFAPKPKSPSVSSSSSSSSSALAPPTQPFSPPKISATVTFSPSKRLISS 60
Query: 428 ALASQLTPPKSSKRPKLSPHTHNPLPSVSNPSLHKRFLEKFLEPIENSFESSNQNPKAPT 487
ALASQLTPPKSSKRPKLSPHTHNPLPSVSNPSLHKRFLEKFLEPIENSFESSNQNPKAPT
Sbjct: 61 ALASQLTPPKSSKRPKLSPHTHNPLPSVSNPSLHKRFLEKFLEPIENSFESSNQNPKAPT 120
Query: 488 GGDAKYTPLELQVVDLKKRYPDVLLMVEVGYRYRFFGQDAEIAARVLGIYAHLDRNFMTA 547
GGDAKYTPLELQVVDLKKRYPDVLLMVEVGYRYRFFG+DAEIAARVLGIYAHLDRNFMTA
Sbjct: 121 GGDAKYTPLELQVVDLKKRYPDVLLMVEVGYRYRFFGKDAEIAARVLGIYAHLDRNFMTA 180
Query: 548 SIPTFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATLEAIQ 607
SIPTFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATLEA+Q
Sbjct: 181 SIPTFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATLEAVQ 240
Query: 608 NLGGAEEGCGGESNYLFCVVEKSMLVDNLDRRIEYGVDVKIGMVAMEISTGDVIYREYDD 667
NLGGAEEGCGGESNYLFCVVEKSMLVDNLDRRIEYGVDVKIGMVAMEISTGDVIYREYDD
Sbjct: 241 NLGGAEEGCGGESNYLFCVVEKSMLVDNLDRRIEYGVDVKIGMVAMEISTGDVIYREYDD 300
Query: 668 NFMRSGLEAMLLSLSPAELLLGDPISKATEKVFDRVGSLSFTVALNAVACCTDCVVC--- 727
NFMRSGLEAMLLSLSPAELLLGDPISKATEKVFDRVGSLSFTVALNAVACCTDCVV
Sbjct: 301 NFMRSGLEAMLLSLSPAELLLGDPISKATEKVFDRVGSLSFTVALNAVACCTDCVVSIVC 360
Query: 728 ------YAGPASNVRVEHVSRDCFKDGSALAEVMSLYENIDKDNLAADHHDPDTVLAERK 787
YAGPASNVRVEHVSRDCFKDGSALAEVMSLYENID DNLAADHHDPDTVLA RK
Sbjct: 361 DQLLLGYAGPASNVRVEHVSRDCFKDGSALAEVMSLYENIDNDNLAADHHDPDTVLAGRK 420
Query: 788 SDRIAIK----------------------------------------------------- 847
SDRIAIK
Sbjct: 421 SDRIAIKEIMNMPNLALQALALTIRYLKQFGLERIVSLGSSFRPFSCKMEMTLSGNTLTQ 480
Query: 848 --VLKNNDDGSETGSLLQCMNHTLTIFGSRLLRQWITHPLCERDMIIARQEAVSEIAAAM 907
VLKNNDDGSETGSLLQCMNHTLTIFGSRLLRQWITHPLCERDMIIARQEAVSEIAAAM
Sbjct: 481 LEVLKNNDDGSETGSLLQCMNHTLTIFGSRLLRQWITHPLCERDMIIARQEAVSEIAAAM 540
Query: 908 VSSKVTQNIRESDEEDSDVMVIEPELNYILSSVLTTLGRAPDIQRGITRIFHRTAAPSEF 967
VSSKV QNIRESDEEDSDVMVIEPELNYILSSVLTTLGRAPDIQRGITRIFHRTAAPSEF
Sbjct: 541 VSSKVYQNIRESDEEDSDVMVIEPELNYILSSVLTTLGRAPDIQRGITRIFHRTAAPSEF 600
Query: 968 IAVIQAILYAGKQLQQFHIDEEDDNYSSESMIGSKLLRKLILSASSSGLISIAAKLLSTI 1027
IAVIQAILYAGKQLQQFHIDEEDDNYSSESMIGSKLLRKLILSASSSGLISIAAKLLSTI
Sbjct: 601 IAVIQAILYAGKQLQQFHIDEEDDNYSSESMIGSKLLRKLILSASSSGLISIAAKLLSTI 660
Query: 1028 SKEAADQGDLPNLMIINNDQFPKVARARKEAQSAREKLDSLITVYRKQLGMRKLEFISVS 1087
SKEAADQGDLPNLMIINNDQFPKVARARKEAQSAREKLDSLITVYRKQLGMRKLEFISVS
Sbjct: 661 SKEAADQGDLPNLMIINNDQFPKVARARKEAQSAREKLDSLITVYRKQLGMRKLEFISVS 720
Query: 1088 GTTHLIELALDVKVPSNWVKINSTKKTIRYHPPEVLAALDELSLANEELMVASRDAWDGF 1147
GTTHLIELALDVKVPSNWVKINSTKKTIRYHPPEVLAALDELSLANEELMVASRDAWDGF
Sbjct: 721 GTTHLIELALDVKVPSNWVKINSTKKTIRYHPPEVLAALDELSLANEELMVASRDAWDGF 780
Query: 1148 LSGFSRYYAEFQSAVQALASIDCLYSLAILSRHKNYVRPEFVHVDEPAQIVICSGRHPVL 1207
LSGFSRYYAEFQSAVQALASIDCLYSLAILSRHKNYVRPEFVH DEPAQIVICSGRHPVL
Sbjct: 781 LSGFSRYYAEFQSAVQALASIDCLYSLAILSRHKNYVRPEFVHDDEPAQIVICSGRHPVL 840
Query: 1208 ESTLQGNFVPNDTNLDVNGEHCQIVTGPNMGGKSCYIRQVALIALMAQVGSYVPAFSAKL 1267
ESTLQGNFVPNDTNLDVNGEHCQIVTGPNMGGKSCYIRQVALIALMAQVGSYVPAFSAKL
Sbjct: 841 ESTLQGNFVPNDTNLDVNGEHCQIVTGPNMGGKSCYIRQVALIALMAQVGSYVPAFSAKL 900
Query: 1268 HVLDGIYTRMGASDSIQQGRSTFLEEMTETSHILHHSTSRSLVIIDELGRGTSTHDGVAI 1327
HVLDGIYTRMGASDSIQQGRSTFLEEMTETSHILHHSTS SLVIIDELGRGTSTHDGVAI
Sbjct: 901 HVLDGIYTRMGASDSIQQGRSTFLEEMTETSHILHHSTSHSLVIIDELGRGTSTHDGVAI 960
Query: 1328 AYAALHNLLHHKKCLVLFVTHYPKVADITKEFPASAGVYHVSYLTSHETPSFSGPKSAQD 1387
AYAALHNLLHHKKCLVLFVTHYPKVADITKEFPASAGVYHVSYLTSHETPSFSGPKSAQD
Sbjct: 961 AYAALHNLLHHKKCLVLFVTHYPKVADITKEFPASAGVYHVSYLTSHETPSFSGPKSAQD 1020
Query: 1388 VIYLYKLVPGIAESSFGFKVAQLAQIPLSCIARATEMGVWLEEIVTRRAQRKTREIHLQE 1440
VIYLYKLVPGIAESSFGFKVAQLAQIPLSCIARATEMGVWLEEIVTRRAQRKTREIHLQE
Sbjct: 1021 VIYLYKLVPGIAESSFGFKVAQLAQIPLSCIARATEMGVWLEEIVTRRAQRKTREIHLQE 1080
BLAST of CmoCh16G001350 vs. NCBI nr
Match:
XP_022923129.1 (DNA mismatch repair protein MSH3 [Cucurbita moschata])
HSP 1 Score: 1993.0 bits (5162), Expect = 0.0e+00
Identity = 1046/1127 (92.81%), Postives = 1049/1127 (93.08%), Query Frame = 0
Query: 368 MGKQKQQVISRFFAPKPKSPSVSSSSSSALAPPTQSFSPPKISATVTFSPSKRLISSALA 427
MGKQKQQVISRFFAPKPKSPSVSSSSSSALAPPTQSFSPPKISATVTFSPSKRLISSALA
Sbjct: 1 MGKQKQQVISRFFAPKPKSPSVSSSSSSALAPPTQSFSPPKISATVTFSPSKRLISSALA 60
Query: 428 SQLTPPKSSKRPKLSPHTHNPLPSVSNPSLHKRFLEKFLEPIENSFESSNQNPKAPTGGD 487
SQLTPPKSSKRPKLSPHTHNPLPSVSNPSLHKRFLEKFLEPIENSFESSNQNPKAPTGGD
Sbjct: 61 SQLTPPKSSKRPKLSPHTHNPLPSVSNPSLHKRFLEKFLEPIENSFESSNQNPKAPTGGD 120
Query: 488 AKYTPLELQVVDLKKRYPDVLLMVEVGYRYRFFGQDAEIAARVLGIYAHLDRNFMTASIP 547
AKYTPLELQVVDLKKRYPDVLLMVEVGYRYRFFGQDAEIAARVLGIYAHLDRNFMTASIP
Sbjct: 121 AKYTPLELQVVDLKKRYPDVLLMVEVGYRYRFFGQDAEIAARVLGIYAHLDRNFMTASIP 180
Query: 548 TFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATLEAIQNLG 607
TFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATLEAIQNLG
Sbjct: 181 TFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATLEAIQNLG 240
Query: 608 GAEEGCGGESNYLFCVVEKSMLVDNLDRRIEYGVDVKIGMVAMEISTGDVIYREYDDNFM 667
GAEEGCGGESNYLFCVVEKSMLVDNLDRRIEYGVDVKIGMVAMEISTGDVIYREYDDNFM
Sbjct: 241 GAEEGCGGESNYLFCVVEKSMLVDNLDRRIEYGVDVKIGMVAMEISTGDVIYREYDDNFM 300
Query: 668 RSGLEAMLLSLSPAELLLGDPISKATEKVFDRVGSLSFTVALNAVACCTDCVVCYAGPAS 727
RSGLEAMLLSLSPAELLLGDPISKATEK+ ++ YAGPAS
Sbjct: 301 RSGLEAMLLSLSPAELLLGDPISKATEKL----------------------LLGYAGPAS 360
Query: 728 NVRVEHVSRDCFKDGSALAEVMSLYENIDKDNLAADHHDPDTVLAERKSDRIAIK----- 787
NVRVEHVSRDCFKDGSALAEVMSLYENIDKDNLAADHHDPDTVLAERKSDRIAIK
Sbjct: 361 NVRVEHVSRDCFKDGSALAEVMSLYENIDKDNLAADHHDPDTVLAERKSDRIAIKEIMNM 420
Query: 788 --------------------------------------------------VLKNNDDGSE 847
VLKNNDDGSE
Sbjct: 421 PNLALQALALTIRYLKQFGLERIVSLGSSFRPFSCKMEMTLSGNTLTQLEVLKNNDDGSE 480
Query: 848 TGSLLQCMNHTLTIFGSRLLRQWITHPLCERDMIIARQEAVSEIAAAMVSSKVTQNIRES 907
TGSLLQCMNHTLTIFGSRLLRQWITHPLCERDMIIARQEAVSEIAAAMVSSKVTQNIRES
Sbjct: 481 TGSLLQCMNHTLTIFGSRLLRQWITHPLCERDMIIARQEAVSEIAAAMVSSKVTQNIRES 540
Query: 908 DEEDSDVMVIEPELNYILSSVLTTLGRAPDIQRGITRIFHRTAAPSEFIAVIQAILYAGK 967
DEEDSDVMVIEPELNYILSSVLTTLGRAPDIQRGITRIFHRTAAPSEFIAVIQAILYAGK
Sbjct: 541 DEEDSDVMVIEPELNYILSSVLTTLGRAPDIQRGITRIFHRTAAPSEFIAVIQAILYAGK 600
Query: 968 QLQQFHIDEEDDNYSSESMIGSKLLRKLILSASSSGLISIAAKLLSTISKEAADQGDLPN 1027
QLQQFHIDEEDDNYSSESMIGSKLLRKLILSASSSGLISIAAKLLSTISKEAADQGDLPN
Sbjct: 601 QLQQFHIDEEDDNYSSESMIGSKLLRKLILSASSSGLISIAAKLLSTISKEAADQGDLPN 660
Query: 1028 LMIINNDQFPKVARARKEAQSAREKLDSLITVYRKQLGMRKLEFISVSGTTHLIELALDV 1087
LMIINNDQFPKVARARKEAQSAREKLDSLITVYRKQLGMRKLEFISVSGTTHLIELALDV
Sbjct: 661 LMIINNDQFPKVARARKEAQSAREKLDSLITVYRKQLGMRKLEFISVSGTTHLIELALDV 720
Query: 1088 KVPSNWVKINSTKKTIRYHPPEVLAALDELSLANEELMVASRDAWDGFLSGFSRYYAEFQ 1147
KVPSNWVKINSTKKTIRYHPPEVLAALDELSLANEELMVASRDAWDGFLSGFSRYYAEFQ
Sbjct: 721 KVPSNWVKINSTKKTIRYHPPEVLAALDELSLANEELMVASRDAWDGFLSGFSRYYAEFQ 780
Query: 1148 SAVQALASIDCLYSLAILSRHKNYVRPEFVHVDEPAQIVICSGRHPVLESTLQGNFVPND 1207
SAVQALASIDCLYSLAILSRHKNYVRPEFVHVDEPAQIVICSGRHPVLESTLQGNFVPND
Sbjct: 781 SAVQALASIDCLYSLAILSRHKNYVRPEFVHVDEPAQIVICSGRHPVLESTLQGNFVPND 840
Query: 1208 TNLDVNGEHCQIVTGPNMGGKSCYIRQVALIALMAQVGSYVPAFSAKLHVLDGIYTRMGA 1267
TNLDVNGEHCQIVTGPNMGGKSCYIRQVALIALMAQVGSYVPAFSAKLHVLDGIYTRMGA
Sbjct: 841 TNLDVNGEHCQIVTGPNMGGKSCYIRQVALIALMAQVGSYVPAFSAKLHVLDGIYTRMGA 900
Query: 1268 SDSIQQGRSTFLEEMTETSHILHHSTSRSLVIIDELGRGTSTHDGVAIAYAALHNLLHHK 1327
SDSIQQGRSTFLEEMTETSHILHHSTSRSLVIIDELGRGTSTHDGVAIAYAALHNLLHHK
Sbjct: 901 SDSIQQGRSTFLEEMTETSHILHHSTSRSLVIIDELGRGTSTHDGVAIAYAALHNLLHHK 960
Query: 1328 KCLVLFVTHYPKVADITKEFPASAGVYHVSYLTSHETPSFSGPKSAQDVIYLYKLVPGIA 1387
KCLVLFVTHYPKVADITKEFPASAGVYHVSYLTSHETPSFSGPKSAQDVIYLYKLVPGIA
Sbjct: 961 KCLVLFVTHYPKVADITKEFPASAGVYHVSYLTSHETPSFSGPKSAQDVIYLYKLVPGIA 1020
Query: 1388 ESSFGFKVAQLAQIPLSCIARATEMGVWLEEIVTRRAQRKTREIHLQEASGKGLELESSE 1440
ESSFGFKVAQLAQIPLSCIARATEMGVWLEEIVTRRAQRKTREIHLQEASGKGLELESSE
Sbjct: 1021 ESSFGFKVAQLAQIPLSCIARATEMGVWLEEIVTRRAQRKTREIHLQEASGKGLELESSE 1080
BLAST of CmoCh16G001350 vs. NCBI nr
Match:
XP_022984606.1 (DNA mismatch repair protein MSH3 [Cucurbita maxima])
HSP 1 Score: 1958.7 bits (5073), Expect = 0.0e+00
Identity = 1026/1127 (91.04%), Postives = 1039/1127 (92.19%), Query Frame = 0
Query: 368 MGKQKQQVISRFFAPKPKSPSVSSSSSSALAPPTQSFSPPKISATVTFSPSKRLISSALA 427
MGKQKQQVISRFFAPKPKSPSVSSSSSSALAPPTQ FSPPKISATVTFSPSKRLISSALA
Sbjct: 1 MGKQKQQVISRFFAPKPKSPSVSSSSSSALAPPTQPFSPPKISATVTFSPSKRLISSALA 60
Query: 428 SQLTPPKSSKRPKLSPHTHNPLPSVSNPSLHKRFLEKFLEPIENSFESSNQNPKAPTGGD 487
SQLTPPKSSKRPKLSPHTHNPLPSVSNP+LHKRFLEKFL+PIENSFESSNQNPKAPTGGD
Sbjct: 61 SQLTPPKSSKRPKLSPHTHNPLPSVSNPALHKRFLEKFLQPIENSFESSNQNPKAPTGGD 120
Query: 488 AKYTPLELQVVDLKKRYPDVLLMVEVGYRYRFFGQDAEIAARVLGIYAHLDRNFMTASIP 547
AKYTPLELQVVDLKKRYPDVLLMVEVGYRYRFFGQDAEIAARVLGIYAHLDRNFMTASIP
Sbjct: 121 AKYTPLELQVVDLKKRYPDVLLMVEVGYRYRFFGQDAEIAARVLGIYAHLDRNFMTASIP 180
Query: 548 TFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATLEAIQNLG 607
TFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATLEA+QNLG
Sbjct: 181 TFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATLEAVQNLG 240
Query: 608 GAEEGCGGESNYLFCVVEKSMLVDNLDRRIEYGVDVKIGMVAMEISTGDVIYREYDDNFM 667
GAEEGCGGESNYLFCVVEKSMLVDNLD RIEYGVDVKIGMVAMEISTGDVIYREYDDNFM
Sbjct: 241 GAEEGCGGESNYLFCVVEKSMLVDNLDSRIEYGVDVKIGMVAMEISTGDVIYREYDDNFM 300
Query: 668 RSGLEAMLLSLSPAELLLGDPISKATEKVFDRVGSLSFTVALNAVACCTDCVVCYAGPAS 727
RSGLEAMLLSLSPAELLLGDPISKATEK+ ++ YAGPAS
Sbjct: 301 RSGLEAMLLSLSPAELLLGDPISKATEKL----------------------LLGYAGPAS 360
Query: 728 NVRVEHVSRDCFKDGSALAEVMSLYENIDKDNLAADHHDPDTVLAERKSDRIAIK----- 787
NVRVEHVSRDCFKDGSALAEV SLYENIDKDNLAADHHDPDTVLA RKSDRIAIK
Sbjct: 361 NVRVEHVSRDCFKDGSALAEVTSLYENIDKDNLAADHHDPDTVLAGRKSDRIAIKEIMNM 420
Query: 788 --------------------------------------------------VLKNNDDGSE 847
VLKNNDDGSE
Sbjct: 421 PNLALQALALTIRYLKQFGLERIVSLGSSFRPFSCKMEMTLSGNTLTQLEVLKNNDDGSE 480
Query: 848 TGSLLQCMNHTLTIFGSRLLRQWITHPLCERDMIIARQEAVSEIAAAMVSSKVTQNIRES 907
TGSLLQCMNHTLTIFGSRLLRQWITHPLCERDMIIARQEAVSEIAAAMVS+KV+QNIRES
Sbjct: 481 TGSLLQCMNHTLTIFGSRLLRQWITHPLCERDMIIARQEAVSEIAAAMVSTKVSQNIRES 540
Query: 908 DEEDSDVMVIEPELNYILSSVLTTLGRAPDIQRGITRIFHRTAAPSEFIAVIQAILYAGK 967
+EEDSDVMVIEPELNYILSSVLTTLGRAPDIQRGITRIFHRTAAPSEFIAVIQAILYAGK
Sbjct: 541 EEEDSDVMVIEPELNYILSSVLTTLGRAPDIQRGITRIFHRTAAPSEFIAVIQAILYAGK 600
Query: 968 QLQQFHIDEEDDNYSSESMIGSKLLRKLILSASSSGLISIAAKLLSTISKEAADQGDLPN 1027
QLQQFHIDEEDDNYSSESMIGSKLLRKLILSASSSGLISIAAKLLSTISKEAADQGDLPN
Sbjct: 601 QLQQFHIDEEDDNYSSESMIGSKLLRKLILSASSSGLISIAAKLLSTISKEAADQGDLPN 660
Query: 1028 LMIINNDQFPKVARARKEAQSAREKLDSLITVYRKQLGMRKLEFISVSGTTHLIELALDV 1087
LMIINNDQFPKVARARKEAQSAREKLDSLIT+YRKQLGMRKLEF SVSGTTHLIELALDV
Sbjct: 661 LMIINNDQFPKVARARKEAQSAREKLDSLITIYRKQLGMRKLEFTSVSGTTHLIELALDV 720
Query: 1088 KVPSNWVKINSTKKTIRYHPPEVLAALDELSLANEELMVASRDAWDGFLSGFSRYYAEFQ 1147
KVPSNWVKINSTKKTIRYHPPEVLAALDELSLANEELMVASR+AWDGFLSGFSRYYAEFQ
Sbjct: 721 KVPSNWVKINSTKKTIRYHPPEVLAALDELSLANEELMVASREAWDGFLSGFSRYYAEFQ 780
Query: 1148 SAVQALASIDCLYSLAILSRHKNYVRPEFVHVDEPAQIVICSGRHPVLESTLQGNFVPND 1207
SAVQALASIDCLYSLAILSRHKNYVRPEFVH DEPAQIVICSGRHPVLEST+QGNFVPND
Sbjct: 781 SAVQALASIDCLYSLAILSRHKNYVRPEFVHDDEPAQIVICSGRHPVLESTVQGNFVPND 840
Query: 1208 TNLDVNGEHCQIVTGPNMGGKSCYIRQVALIALMAQVGSYVPAFSAKLHVLDGIYTRMGA 1267
TNLDVNGEHCQIVTGPNMGGKSCYIRQVALIALMAQVGSYVPAFSAKLHVLDGIYTRMGA
Sbjct: 841 TNLDVNGEHCQIVTGPNMGGKSCYIRQVALIALMAQVGSYVPAFSAKLHVLDGIYTRMGA 900
Query: 1268 SDSIQQGRSTFLEEMTETSHILHHSTSRSLVIIDELGRGTSTHDGVAIAYAALHNLLHHK 1327
SDSIQQGRSTFLEEMTETSHILHHSTSRSLVIIDELGRGTSTHDGVAIAYAAL NLLHHK
Sbjct: 901 SDSIQQGRSTFLEEMTETSHILHHSTSRSLVIIDELGRGTSTHDGVAIAYAALQNLLHHK 960
Query: 1328 KCLVLFVTHYPKVADITKEFPASAGVYHVSYLTSHETPSFSGPKSAQDVIYLYKLVPGIA 1387
KCLVLFVTHYPKVADITKEFPASAGVYHVSYLTSHE PSFSGPKSAQDVIYLYKLVPGIA
Sbjct: 961 KCLVLFVTHYPKVADITKEFPASAGVYHVSYLTSHERPSFSGPKSAQDVIYLYKLVPGIA 1020
Query: 1388 ESSFGFKVAQLAQIPLSCIARATEMGVWLEEIVTRRAQRKTREIHLQEASGKGLELESSE 1440
ESSFGFKVAQLAQIPL CIARATEMGVWLEEIVTRRAQRKTRE+HLQEASGKGLELESSE
Sbjct: 1021 ESSFGFKVAQLAQIPLPCIARATEMGVWLEEIVTRRAQRKTREMHLQEASGKGLELESSE 1080
BLAST of CmoCh16G001350 vs. NCBI nr
Match:
XP_023552828.1 (LOW QUALITY PROTEIN: DNA mismatch repair protein MSH3 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1806.6 bits (4678), Expect = 0.0e+00
Identity = 945/1046 (90.34%), Postives = 958/1046 (91.59%), Query Frame = 0
Query: 451 SVSNPSLHKRFLEKFLEPIENSFESSNQNPKAPTGGDAKYTPLELQVVDLKKRYPDVLLM 510
++SN SLHKRFLEKFLEPIENSFESSNQNPKAPTGG AKYTPLELQVVDLKKRYPDVLLM
Sbjct: 6 TISNISLHKRFLEKFLEPIENSFESSNQNPKAPTGGVAKYTPLELQVVDLKKRYPDVLLM 65
Query: 511 VEVGYRYRFFGQDAEIAARVLGIYAHLDRNFMTASIPTFRLNVHVRRLVSAGYKVGVVKQ 570
VEVGYRYRFFGQDAEIAARVLGIYAHLDRNFMTASIPTFRLNVHVRRLVSAGYKVGVVKQ
Sbjct: 66 VEVGYRYRFFGQDAEIAARVLGIYAHLDRNFMTASIPTFRLNVHVRRLVSAGYKVGVVKQ 125
Query: 571 TETAAIKAHGSNKLGPFCRGLSALYTKATLEAIQNLGGAEEGCGGESNYLFCVVEKSMLV 630
TETAA+KAHGSNKLGPFCRGLSALYTKATLEA+QNLGGAEEGCGGESNYLFCVVEKSML+
Sbjct: 126 TETAAMKAHGSNKLGPFCRGLSALYTKATLEAVQNLGGAEEGCGGESNYLFCVVEKSMLM 185
Query: 631 DNLDRRIEYGVDVKIGMVAMEISTGDVIYREYDDNFMRSGLEAMLLSLSPAELLLGDPIS 690
DNLDRRIEYGVDVKIGMVAMEISTGDVIYREYDDNFMRSGLEAMLLSLSPAELLLGDPIS
Sbjct: 186 DNLDRRIEYGVDVKIGMVAMEISTGDVIYREYDDNFMRSGLEAMLLSLSPAELLLGDPIS 245
Query: 691 KATEKVFDRVGSLSFTVALNAVACCTDCVVCYAGPASNVRVEHVSRDCFKDGSALAEVMS 750
KATEK+ ++ YAGPASNVRVEHVSRDCFKDGSALAEVMS
Sbjct: 246 KATEKL----------------------LLGYAGPASNVRVEHVSRDCFKDGSALAEVMS 305
Query: 751 LYENIDKDNLAADHHDPDTVLAERKSDRIAIK---------------------------- 810
LYENIDKDNLAADHHDPDT+LA RKSDRIAIK
Sbjct: 306 LYENIDKDNLAADHHDPDTMLAGRKSDRIAIKEIMNMPNLALQALALTIRYLKQFGLERI 365
Query: 811 ---------------------------VLKNNDDGSETGSLLQCMNHTLTIFGSRLLRQW 870
VLKNNDDGSETGSLLQCMNHTLTIFGSRLLRQW
Sbjct: 366 VSLGSSFRPFSCKMEMTLSGNTLTQLEVLKNNDDGSETGSLLQCMNHTLTIFGSRLLRQW 425
Query: 871 ITHPLCERDMIIARQEAVSEIAAAMVSSKVTQNIRESDEEDSDVMVIEPELNYILSSVLT 930
ITHPLCERDMIIARQEAVSEIAAAMVSSKV+QNIRESDEEDSDVMVIEPELNYILSSVLT
Sbjct: 426 ITHPLCERDMIIARQEAVSEIAAAMVSSKVSQNIRESDEEDSDVMVIEPELNYILSSVLT 485
Query: 931 TLGRAPDIQRGITRIFHRTAAPS--EFIAVIQAILYAGKQLQQFHIDEEDDNYSSESMIG 990
TLGRAPDIQRGITRIFHRTAAPS FIAVIQAILYAGKQLQQFHIDEEDDNYSSESMIG
Sbjct: 486 TLGRAPDIQRGITRIFHRTAAPSXEXFIAVIQAILYAGKQLQQFHIDEEDDNYSSESMIG 545
Query: 991 SKLLRKLILSASSSGLISIAAKLLSTISKEAADQGDLPNLMIINNDQFPKVARARKEAQS 1050
SKLLRKLILSASSSGLISIAAKLLSTISKEAADQGDLPNLMIINNDQFPKVARARKEAQS
Sbjct: 546 SKLLRKLILSASSSGLISIAAKLLSTISKEAADQGDLPNLMIINNDQFPKVARARKEAQS 605
Query: 1051 AREKLDSLITVYRKQLGMRKLEFISVSGTTHLIELALDVKVPSNWVKINSTKKTIRYHPP 1110
AREKLDSLITVYRKQLGMRKLEFISVSGTTHLIELALDVKVPSNWVKINSTKKTIRYHPP
Sbjct: 606 AREKLDSLITVYRKQLGMRKLEFISVSGTTHLIELALDVKVPSNWVKINSTKKTIRYHPP 665
Query: 1111 EVLAALDELSLANEELMVASRDAWDGFLSGFSRYYAEFQSAVQALASIDCLYSLAILSRH 1170
EVLAALDELSLANEELMVASRDAWDGFLSGFSRYYAEFQSAVQALASIDCLYSLAILSRH
Sbjct: 666 EVLAALDELSLANEELMVASRDAWDGFLSGFSRYYAEFQSAVQALASIDCLYSLAILSRH 725
Query: 1171 KNYVRPEFVHVDEPAQIVICSGRHPVLESTLQGNFVPNDTNLDVNGEHCQIVTGPNMGGK 1230
KNYVRPEFVH DEPAQIVICSGRHPVLESTLQGNFVPNDTNLDVNGEHCQIVTGPNMGGK
Sbjct: 726 KNYVRPEFVHDDEPAQIVICSGRHPVLESTLQGNFVPNDTNLDVNGEHCQIVTGPNMGGK 785
Query: 1231 SCYIRQVALIALMAQVGSYVPAFSAKLHVLDGIYTRMGASDSIQQGRSTFLEEMTETSHI 1290
SCYIRQVALIALMAQVGSYVPAFSAKLHVLDGIYTRMGASDSIQQGRSTFLEEMTETSHI
Sbjct: 786 SCYIRQVALIALMAQVGSYVPAFSAKLHVLDGIYTRMGASDSIQQGRSTFLEEMTETSHI 845
Query: 1291 LHHSTSRSLVIIDELGRGTSTHDGVAIAYAALHNLLHHKKCLVLFVTHYPKVADITKEFP 1350
LHHSTSRSLVIIDELGRGTSTHDGVAIAYAAL NLLHHKKCLVLFVTHYPKVADITKEFP
Sbjct: 846 LHHSTSRSLVIIDELGRGTSTHDGVAIAYAALQNLLHHKKCLVLFVTHYPKVADITKEFP 905
Query: 1351 ASAGVYHVSYLTSHETPSFSGPKSAQDVIYLYKLVPGIAESSFGFKVAQLAQIPLSCIAR 1410
SAGVYHVSYLTSH+TPSFS PKS+QDVIYLYKLVPGIAESSFGFKVAQLAQIPLSCIAR
Sbjct: 906 VSAGVYHVSYLTSHKTPSFSVPKSSQDVIYLYKLVPGIAESSFGFKVAQLAQIPLSCIAR 965
Query: 1411 ATEMGVWLEEIVTRRAQRKTREIHLQEASGKGLELESSECFLEDRIDAYEEFFLFLKATI 1440
ATEMGVWLEEIVTRRAQRKTREIHLQ+ASGKGLELESSECFLEDRIDAYEEFFLFLKATI
Sbjct: 966 ATEMGVWLEEIVTRRAQRKTREIHLQKASGKGLELESSECFLEDRIDAYEEFFLFLKATI 1025
BLAST of CmoCh16G001350 vs. TAIR 10
Match:
AT4G25540.1 (homolog of DNA mismatch repair protein MSH3 )
HSP 1 Score: 1105.9 bits (2859), Expect = 0.0e+00
Identity = 619/1115 (55.52%), Postives = 768/1115 (68.88%), Query Frame = 0
Query: 368 MGKQKQQVISRFFAPKPKSPSVSSSSSSALAPPTQSFSPPKISATVTFSPSKR-LISSAL 427
MGKQKQQ ISRFFAPKPKSP+ + + + P PPKISATV+FSPSKR L+S L
Sbjct: 1 MGKQKQQTISRFFAPKPKSPTHEPNPVAESSTP-----PPKISATVSFSPSKRKLLSDHL 60
Query: 428 ASQLTPPKSSKRPKLSPHTHNPLPSVSNPSLHKRFLEKFLEPIENSFESSNQNPKAPTGG 487
A+ S K+PKLSPHT NP+P +P+LH+RFL++FLEP S + T
Sbjct: 61 AA-----ASPKKPKLSPHTQNPVP---DPNLHQRFLQRFLEP-------SPEEYVPETSS 120
Query: 488 DAKYTPLELQVVDLKKRYPDVLLMVEVGYRYRFFGQDAEIAARVLGIYAHLDRNFMTASI 547
KYTPLE QVV+LK +YPDV+LMVEVGYRYRFFG+DAEIAARVLGIYAH+D NFMTAS+
Sbjct: 121 SRKYTPLEQQVVELKSKYPDVVLMVEVGYRYRFFGEDAEIAARVLGIYAHMDHNFMTASV 180
Query: 548 PTFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATLEAIQNL 607
PTFRLN HVRRLV+AGYK+GVVKQTETAAIK+HG+N+ GPF RGLSALYTKATLEA +++
Sbjct: 181 PTFRLNFHVRRLVNAGYKIGVVKQTETAAIKSHGANRTGPFFRGLSALYTKATLEAAEDI 240
Query: 608 G---GAEEGCGGESNYLFCVVEKSMLVDNLDRRIEYGVDVKIGMVAMEISTGDVIYREYD 667
G EEG G +SN+L CVV++ + + L IE DV++G+V +EISTG+V+Y E++
Sbjct: 241 SGGCGGEEGFGSQSNFLVCVVDERVKSETLGCGIEMSFDVRVGVVGVEISTGEVVYEEFN 300
Query: 668 DNFMRSGLEAMLLSLSPAELLLGDPISKATEKVFDRVGSLSFTVALNAVACCTDCVVCYA 727
DNFMRSGLEA++LSLSPAELLLG P+S+ TEK +V +A
Sbjct: 301 DNFMRSGLEAVILSLSPAELLLGQPLSQQTEKF----------------------LVAHA 360
Query: 728 GPASNVRVEHVSRDCFKDGSALAEVMSLYENIDKDNLAADHH------------------ 787
GP SNVRVE S DCF +G+A+ EV+SL E I NL D
Sbjct: 361 GPTSNVRVERASLDCFSNGNAVDEVISLCEKISAGNLEDDKEMKLEAAEKGMSCLTVHTI 420
Query: 788 ------------------------------------DPDTVLAERKSDRIAIKVLKNNDD 847
+T + + ++V+KNN D
Sbjct: 421 MNMPHLTVQALALTFCHLKQFGFERILYQGASFRSLSSNTEMTLSANTLQQLEVVKNNSD 480
Query: 848 GSETGSLLQCMNHTLTIFGSRLLRQWITHPLCERDMIIARQEAVSEIAAAMVSSKVTQNI 907
GSE+GSL MNHTLT++GSRLLR W+THPLC+R++I AR +AVSEI+A M S +Q
Sbjct: 481 GSESGSLFHNMNHTLTVYGSRLLRHWVTHPLCDRNLISARLDAVSEISACMGSHSSSQLS 540
Query: 908 RESDEEDSDVMVIEPELNYILSSVLTTLGRAPDIQRGITRIFHRTAAPSEFIAVIQAILY 967
E EE S+ ++ PE +LSSVLT + R+ DIQRGITRIFHRTA +EFIAV++AIL
Sbjct: 541 SELVEEGSERAIVSPEFYLVLSSVLTAMSRSSDIQRGITRIFHRTAKATEFIAVMEAILL 600
Query: 968 AGKQLQQFHIDEEDDNYSSES-MIGSKLLRKLILSASSSGLISIAAKLLSTISKEAADQG 1027
AGKQ+Q+ I ++ + S +S + S LLRKLI SS ++ A KLLS ++KEAA +G
Sbjct: 601 AGKQIQRLGIKQDSEMRSMQSATVRSTLLRKLISVISSPVVVDNAGKLLSALNKEAAVRG 660
Query: 1028 DLPNLMIINNDQFPKVARARKEAQSAREKLDSLITVYRKQLGMRKLEFISVSGTTHLIEL 1087
DL +++I ++DQFP++A AR+ REKLDS I +RK+L +R LEF+ VSG THLIEL
Sbjct: 661 DLLDILITSSDQFPELAEARQAVLVIREKLDSSIASFRKKLAIRNLEFLQVSGITHLIEL 720
Query: 1088 ALDVKVPSNWVKINSTKKTIRYHPPEVLAALDELSLANEELMVASRDAWDGFLSGFSRYY 1147
+D KVP NWVK+NSTKKTIRYHPPE++A LDEL+LA E L + +R +WD FL FSRYY
Sbjct: 721 PVDSKVPMNWVKVNSTKKTIRYHPPEIVAGLDELALATEHLAIVNRASWDSFLKSFSRYY 780
Query: 1148 AEFQSAVQALASIDCLYSLAILSRHKNYVRPEFVHVDEPAQIVICSGRHPVLESTLQGNF 1207
+F++AVQALA++DCL+SL+ LSR+KNYVRPEFV EP +I I SGRHPVLE+ LQ NF
Sbjct: 781 TDFKAAVQALAALDCLHSLSTLSRNKNYVRPEFVDDCEPVEINIQSGRHPVLETILQDNF 840
Query: 1208 VPNDTNLDVNGEHCQIVTGPNMGGKSCYIRQVALIALMAQVGSYVPAFSAKLHVLDGIYT 1267
VPNDT L GE+CQI+TGPNMGGKSCYIRQVALI++MAQVGS+VPA AKLHVLDG++T
Sbjct: 841 VPNDTILHAEGEYCQIITGPNMGGKSCYIRQVALISIMAQVGSFVPASFAKLHVLDGVFT 900
Query: 1268 RMGASDSIQQGRSTFLEEMTETSHILHHSTSRSLVIIDELGRGTSTHDGVAIAYAALHNL 1327
RMGASDSIQ GRSTFLEE++E SHI+ +SRSLVI+DELGRGTSTHDGVAIAYA L +L
Sbjct: 901 RMGASDSIQHGRSTFLEELSEASHIIRTCSSRSLVILDELGRGTSTHDGVAIAYATLQHL 960
Query: 1328 LHHKKCLVLFVTHYPKVADITKEFPASAGVYHVSYLTSHETPSFSGPKSAQDVIYLYKLV 1387
L K+CLVLFVTHYP++A+I+ FP S G YHVSYLT + G DV YLYKLV
Sbjct: 961 LAEKRCLVLFVTHYPEIAEISNGFPGSVGTYHVSYLTLQKD---KGSYDHDDVTYLYKLV 1020
Query: 1388 PGIAESSFGFKVAQLAQIPLSCIARATEMGVWLEEIVTRRAQRKTREIHLQEASGKGLEL 1424
G+ SFGFKVAQLAQIP SCI RA M LE A+ + RE + + +G E
Sbjct: 1021 RGLCSRSFGFKVAQLAQIPPSCIRRAISMAAKLE------AEVRARERNTRMGEPEGHEE 1060
BLAST of CmoCh16G001350 vs. TAIR 10
Match:
AT5G23850.1 (Arabidopsis thaliana protein of unknown function (DUF821) )
HSP 1 Score: 459.5 bits (1181), Expect = 1.0e-128
Identity = 205/335 (61.19%), Postives = 259/335 (77.31%), Query Frame = 0
Query: 2 LESGRPKAGFRLVIIDGRAYVEKFMDAYQSRDKFTLWGILQLLRLYPGKIPDLDLMFNCE 61
LE + A FRL I+ G+ YVEKF DA+Q+RD FT+WG LQLLR YPGKIPDL+LMF+C
Sbjct: 163 LERAKKTATFRLAIVGGKIYVEKFQDAFQTRDVFTIWGFLQLLRKYPGKIPDLELMFDCV 222
Query: 62 DRPNIFIGDYSGPGPNSTAPPPVFRYCGDDDTLDIVFPDWSFWGWPEINIKPWVPLMEDL 121
D P + +++ G N+ +PPP+FRYCG+++TLDIVFPDWSFWGW E+NIKPW L+++L
Sbjct: 223 DWPVVRATEFA--GANAPSPPPLFRYCGNEETLDIVFPDWSFWGWAEVNIKPWESLLKEL 282
Query: 122 KQGNKRTKWSNREAHAYWKGNIKVSMVRYKLLGCNLSREHDWKARVFMQDWDKEQEQRFK 181
++GN+RTKW NRE +AYWKGN V+ R L+ CN+S EH+W AR++ QDW KE ++ +K
Sbjct: 283 REGNERTKWINREPYAYWKGNPMVAETRQDLMKCNVSEEHEWNARLYAQDWIKESKEGYK 342
Query: 182 NSNLADQCVHRYKIYVEGVGWSVSLKYILACDSVTLMVNPYYYDFFTRSLVPMHHYWPIK 241
S+LA QC HRYKIY+EG WSVS KYILACDSVTL+V P+YYDFFTR L+P HHYWP++
Sbjct: 343 QSDLASQCHHRYKIYIEGSAWSVSEKYILACDSVTLLVKPHYYDFFTRGLLPAHHYWPVR 402
Query: 242 DDDDMCNSIKFAVDWGNTHQQKVRAIGKAASKFTEEQLRMEKVYDYMFHSLNEYSKLLTF 301
+ D C SIKFAVDWGN+H QK + IGKAAS F ++ L+M+ VYDYM+H L EYSKLL F
Sbjct: 403 -EHDKCRSIKFAVDWGNSHIQKAQDIGKAASDFIQQDLKMDYVYDYMYHLLTEYSKLLQF 462
Query: 302 KPTIPPNATELCLEELACPAQDLATKFMIDTLVKQ 337
KP IP NA E+C E +AC KFM ++LVKQ
Sbjct: 463 KPEIPRNAVEICSETMACLRSGNERKFMTESLVKQ 494
BLAST of CmoCh16G001350 vs. TAIR 10
Match:
AT3G48980.1 (Arabidopsis thaliana protein of unknown function (DUF821) )
HSP 1 Score: 455.7 bits (1171), Expect = 1.4e-127
Identity = 204/335 (60.90%), Postives = 259/335 (77.31%), Query Frame = 0
Query: 2 LESGRPKAGFRLVIIDGRAYVEKFMDAYQSRDKFTLWGILQLLRLYPGKIPDLDLMFNCE 61
LE A FRL II+GR YVEKF +A+Q+RD FT+WG +QLLR YPGKIPDL+LMF+C
Sbjct: 160 LERANATAIFRLAIINGRIYVEKFREAFQTRDVFTIWGFVQLLRRYPGKIPDLELMFDCV 219
Query: 62 DRPNIFIGDYSGPGPNSTAPPPVFRYCGDDDTLDIVFPDWSFWGWPEINIKPWVPLMEDL 121
D P + +++ G + PPP+FRYC +D+TLDIVFPDWS+WGW E+NIKPW L+++L
Sbjct: 220 DWPVVKAAEFA--GVDQPPPPPLFRYCANDETLDIVFPDWSYWGWAEVNIKPWESLLKEL 279
Query: 122 KQGNKRTKWSNREAHAYWKGNIKVSMVRYKLLGCNLSREHDWKARVFMQDWDKEQEQRFK 181
++GN+RTKW +RE +AYWKGN V+ R L+ CNLS +DWKAR++ QDW KE ++ +K
Sbjct: 280 REGNQRTKWIDREPYAYWKGNPTVAETRLDLMKCNLSEVYDWKARLYKQDWVKESKEGYK 339
Query: 182 NSNLADQCVHRYKIYVEGVGWSVSLKYILACDSVTLMVNPYYYDFFTRSLVPMHHYWPIK 241
S+LA QC HRYKIY+EG WSVS KYILACDSVTLMV P+YYDFFTR + P HHYWP+K
Sbjct: 340 QSDLASQCHHRYKIYIEGSAWSVSEKYILACDSVTLMVKPHYYDFFTRGMFPGHHYWPVK 399
Query: 242 DDDDMCNSIKFAVDWGNTHQQKVRAIGKAASKFTEEQLRMEKVYDYMFHSLNEYSKLLTF 301
+DD C SIKFAVDWGN H +K + IGK AS+F +++L+M+ VYDYMFH L +YSKLL F
Sbjct: 400 -EDDKCRSIKFAVDWGNLHMRKAQDIGKKASEFVQQELKMDYVYDYMFHLLIQYSKLLRF 459
Query: 302 KPTIPPNATELCLEELACPAQDLATKFMIDTLVKQ 337
KP IP N+TELC E +ACP KFM+++LVK+
Sbjct: 460 KPEIPQNSTELCSEAMACPRDGNERKFMMESLVKR 491
BLAST of CmoCh16G001350 vs. TAIR 10
Match:
AT1G63420.1 (Arabidopsis thaliana protein of unknown function (DUF821) )
HSP 1 Score: 428.7 bits (1101), Expect = 1.9e-119
Identity = 200/343 (58.31%), Postives = 253/343 (73.76%), Query Frame = 0
Query: 1 MLESGRPKAGFRLVIIDGRAYVEKFMDAYQSRDKFTLWGILQLLRLYPGKIPDLDLMFNC 60
M+E G+ A FRLVI++G+ +VE + + Q+RD FTLWGILQLLR YPGK+PD+DLMF+C
Sbjct: 193 MVERGKTTAHFRLVILNGKVFVENYKKSIQTRDAFTLWGILQLLRKYPGKLPDVDLMFDC 252
Query: 61 EDRPNIFIGDYSGPGPN-STAPPPVFRYCGDDDTLDIVFPDWSFWGWPEINIKPWVPLME 120
+DRP I Y+ APPP+FRYCGD T+DIVFPDWSFWGW EINI+ W +++
Sbjct: 253 DDRPVIRSDGYNILNRTVENAPPPLFRYCGDRWTVDIVFPDWSFWGWQEINIREWSKVLK 312
Query: 121 DLKQGNKRTKWSNREAHAYWKGN-IKVSMVRYKLLGCNLSREHDWKARVFMQDWDKEQEQ 180
++++G K+ K+ R+A+AYWKGN S R LL CNLS HDW AR+F+QDW E ++
Sbjct: 313 EMEEGKKKKKFMERDAYAYWKGNPFVASPSREDLLTCNLSSLHDWNARIFIQDWISEGQR 372
Query: 181 RFKNSNLADQCVHRYKIYVEGVGWSVSLKYILACDSVTLMVNPYYYDFFTRSLVPMHHYW 240
F+NSN+A+QC +RYKIY+EG WSVS KYILACDSVTLMV PYYYDFF+R+L P+ HYW
Sbjct: 373 GFENSNVANQCTYRYKIYIEGYAWSVSEKYILACDSVTLMVKPYYYDFFSRTLQPLQHYW 432
Query: 241 PIKDDDDMCNSIKFAVDWGNTHQQKVRAIGKAASKFTEEQLRMEKVYDYMFHSLNEYSKL 300
PI+ D D C SIKFAVDW N H QK + IG+ AS+F + L ME VYDYMFH LNEYSKL
Sbjct: 433 PIR-DKDKCRSIKFAVDWLNNHTQKAQEIGREASEFMQRDLSMENVYDYMFHLLNEYSKL 492
Query: 301 LTFKPTIPPNATELCLEELACPAQ-----DLATKFMIDTLVKQ 337
L +KP +P N+ ELC E L CP++ + KFMI +LV +
Sbjct: 493 LKYKPQVPKNSVELCTEALVCPSEGEDVNGVDKKFMIGSLVSR 534
BLAST of CmoCh16G001350 vs. TAIR 10
Match:
AT2G45830.2 (downstream target of AGL15 2 )
HSP 1 Score: 414.1 bits (1063), Expect = 4.8e-115
Identity = 184/334 (55.09%), Postives = 242/334 (72.46%), Query Frame = 0
Query: 1 MLESGRPKAGFRLVIIDGRAYVEKFMDAYQSRDKFTLWGILQLLRLYPGKIPDLDLMFNC 60
MLE R A FR+VI+DGR YV+K+ + Q+RD FTLWGI+QLLR YPG++PDL+LMF+
Sbjct: 1 MLEKARRTAHFRVVILDGRVYVKKYRKSIQTRDVFTLWGIVQLLRWYPGRLPDLELMFDP 60
Query: 61 EDRPNIFIGDYSGPGPNSTAPPPVFRYCGDDDTLDIVFPDWSFWGWPEINIKPWVPLMED 120
+DRP + D+ G APPP+FRYC DD +LDIVFPDWSFWGW E+NIKPW +
Sbjct: 61 DDRPTVRSKDFQ--GQQHPAPPPLFRYCSDDASLDIVFPDWSFWGWAEVNIKPWDKSLVA 120
Query: 121 LKQGNKRTKWSNREAHAYWKGNIKVSMVRYKLLGCNLSREHDWKARVFMQDWDKEQEQRF 180
+++GNK T+W +R A+AYW+GN V+ R LL CN+S + DW R+++QDWD+E + F
Sbjct: 121 IEEGNKMTQWKDRVAYAYWRGNPNVAPTRRDLLRCNVSAQEDWNTRLYIQDWDRESREGF 180
Query: 181 KNSNLADQCVHRYKIYVEGVGWSVSLKYILACDSVTLMVNPYYYDFFTRSLVPMHHYWPI 240
KNSNL +QC HRYKIY+EG WSVS KYI+ACDS+TL V P +YDF+ R ++P+ HYWPI
Sbjct: 181 KNSNLENQCTHRYKIYIEGWAWSVSEKYIMACDSMTLYVRPMFYDFYVRGMMPLQHYWPI 240
Query: 241 KDDDDMCNSIKFAVDWGNTHQQKVRAIGKAASKFTEEQLRMEKVYDYMFHSLNEYSKLLT 300
+ D C S+KFAV WGNTH + IG+ S+F E+++ME VYDYMFH +NEY+KLL
Sbjct: 241 R-DTSKCTSLKFAVHWGNTHLDQASKIGEEGSRFIREEVKMEYVYDYMFHLMNEYAKLLK 300
Query: 301 FKPTIPPNATELCLEELACPAQDLATKFMIDTLV 335
FKP IP ATE+ + + C A FM +++V
Sbjct: 301 FKPEIPWGATEITPDIMGCSATGRWRDFMEESMV 331
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| O65607 | 0.0e+00 | 55.52 | DNA mismatch repair protein MSH3 OS=Arabidopsis thaliana OX=3702 GN=MSH3 PE=1 SV... | [more] |
| P13705 | 8.7e-154 | 36.56 | DNA mismatch repair protein Msh3 OS=Mus musculus OX=10090 GN=Msh3 PE=2 SV=3 | [more] |
| P20585 | 6.3e-152 | 36.96 | DNA mismatch repair protein Msh3 OS=Homo sapiens OX=9606 GN=MSH3 PE=1 SV=4 | [more] |
| Q1ZXH0 | 2.5e-140 | 34.31 | DNA mismatch repair protein Msh3 OS=Dictyostelium discoideum OX=44689 GN=msh3 PE... | [more] |
| A1DCB2 | 7.9e-139 | 34.75 | DNA mismatch repair protein msh3 OS=Neosartorya fischeri (strain ATCC 1020 / DSM... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1E5H0 | 0.0e+00 | 92.81 | DNA mismatch repair protein OS=Cucurbita moschata OX=3662 GN=LOC111430887 PE=3 S... | [more] |
| A0A6J1J5R3 | 0.0e+00 | 91.04 | DNA mismatch repair protein OS=Cucurbita maxima OX=3661 GN=LOC111482846 PE=3 SV=... | [more] |
| A0A1S3AXV2 | 0.0e+00 | 79.90 | DNA mismatch repair protein MSH3 OS=Cucumis melo OX=3656 GN=LOC103484070 PE=4 SV... | [more] |
| A0A0A0L5V6 | 0.0e+00 | 80.35 | DNA mismatch repair protein OS=Cucumis sativus OX=3659 GN=Csa_3G182010 PE=3 SV=1 | [more] |
| A0A5A7SWU6 | 0.0e+00 | 77.39 | DNA mismatch repair protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KAG7014774.1 | 0.0e+00 | 93.23 | DNA mismatch repair protein MSH3, partial [Cucurbita argyrosperma subsp. argyros... | [more] |
| KAG6576729.1 | 0.0e+00 | 93.33 | DNA mismatch repair protein MSH3, partial [Cucurbita argyrosperma subsp. sororia... | [more] |
| XP_022923129.1 | 0.0e+00 | 92.81 | DNA mismatch repair protein MSH3 [Cucurbita moschata] | [more] |
| XP_022984606.1 | 0.0e+00 | 91.04 | DNA mismatch repair protein MSH3 [Cucurbita maxima] | [more] |
| XP_023552828.1 | 0.0e+00 | 90.34 | LOW QUALITY PROTEIN: DNA mismatch repair protein MSH3 [Cucurbita pepo subsp. pep... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT4G25540.1 | 0.0e+00 | 55.52 | homolog of DNA mismatch repair protein MSH3 | [more] |
| AT5G23850.1 | 1.0e-128 | 61.19 | Arabidopsis thaliana protein of unknown function (DUF821) | [more] |
| AT3G48980.1 | 1.4e-127 | 60.90 | Arabidopsis thaliana protein of unknown function (DUF821) | [more] |
| AT1G63420.1 | 1.9e-119 | 58.31 | Arabidopsis thaliana protein of unknown function (DUF821) | [more] |
| AT2G45830.2 | 4.8e-115 | 55.09 | downstream target of AGL15 2 | [more] |
